Early Holocene cultivation before domestication in northern Syria

Charred plant remains from the sites of Tell Qaramel, Jerf el Ahmar, Dja’de and Tell ‘Abr situated in northern Syria and dated to the tenth and ninth millennia cal b.c. demonstrate that a wide variety of wild pulses, cereals, fruits and nuts was exploited. Five lines of evidence suggest that cultivation was practised at three of the sites. (1) Wild einkorn, wild rye and lentils occur outside their natural habitats. (2) The founder crops barley, emmer and single-grained einkorn appear at different times. (3) An assemblage of weeds of cultivation was identified. (4) There is a gradual decrease in gathered plants such as small seeded grasses and Polygonum/Rumex. (5) Barley grains increase in breadth and thickness. Morphological domestication did not become established, perhaps because seed stock was regularly collected from wild stands. Charred rodent droppings indicate large-scale grain storage.     

Four thousand years of plant exploitation in the Lake Chad Basin (Nigeria), part III: plant impressions in potsherds from the Final Stone Age Gajiganna Culture*

Late Holocene climatic changes caused a large scale regression of the Lake Chad shoreline followed by an expansion of settlements into previously unexplored territories. Numerous Final Stone Age sites of the Gajiganna Culture (1,800 to 800 b.c.) in the Lake Chad Basin (northeast Nigeria) yielded plant impressions in potsherds. The ceramics of Phase I (1,800–1,400 b.c.) were mineral tempered, and plant impressions, mainly of Paniceae, were caused only by incidental inclusion. In contrast, a considerable number of the sherds from Phase II (1,500–800 b.c.) were intentionally tempered with chaff derived from domesticated pearl millet (Pennisetum glaucum), wild Paniceae and wild rice species (Oryza cf. barthii and O. cf. longistaminata). This plant spectrum suggests the exploitation of the wet wild areas, and also the cultivation of pearl millet on sandy soils. The evidence suggests that agricultural practices were established late and were introduced from elsewhere. During the time of seasonally occupied sites in Phase I, the subsistence strategy was based on herding, fishing, and gathering, while in Phase II there are signs of permanent settlements and agriculture. The evidence from the plant impressions indicates that in the Final Stone Age Gajiganna Culture around 1,000–800 b.c., pearl millet became well established while the gathering of wild millets and rice was still practised.*Klee et al. (2000), Zach and Klee (2003)     

Growth inhibitory activity of ABA-β-<Emphasis Type="SmallCaps">d</Emphasis>-glucopyranosyl ester and ABA-β-<Emphasis Type="SmallCaps">d</Emphasis>-glucosidase

Exogenously applied ABA-β-d-glucopyranosyl ester (ABA-GE) inhibited shoot growth of alfalfa (Medicago sativa L.), cress (Lepidium sativum L.), lettuce (Lactuca sativa L.), Digitaria sanguinalis L., timothy (Pheleum pratense L.) and ryegrass (Lolium multiflorum Lam.) seedlings at concentrations greater than 0.1 μM. The growth inhibitory activity of ABA-GE on these shoots was 26–40% of that of (+)-ABA. ABA-β-d-glucosidase activities in these seedlings were 11–31 nmol mg⁻¹ protein min⁻¹. These results suggests that exogenously applied ABA-GE may be absorbed by plant roots and hydrolyzed by ABA-β-d-glucosidase, and liberated free ABA may induce the growth inhibition in these plants. Thus, although ABA-GE had been thought to be physiologically inactive ABA conjugate, ABA-GE may have important physiological functions rather than an inactive conjugated ABA form.     

Reconstitution of cyanogenesis in barley (Hordeum vulgare L.) and its implications for resistance against the barley powdery mildew fungus

Barley (Hordeum vulgare L.) produces a leucine-derived cyanogenic β-d-glucoside, epiheterodendrin that accumulates specifically in leaf epidermis. Barley leaves are not cyanogenic, i.e. they do not possess the ability to release hydrogen cyanide, because they lack a cyanide releasing β-d-glucosidase. Cyanogenesis was reconstituted in barley leaf epidermal cells through single cell expression of a cDNA encoding dhurrinase-2, a cyanogenic β-d-glucosidase from sorghum. This resulted in a 35–60% reduction in colonization rate by an obligate parasite Blumeria graminis f. sp. hordei, the causal agent of barley powdery mildew. A database search for barley homologues of dhurrinase-2 identified a (1,4)-β-d-glucan exohydrolase isozyme βII that is located in the starchy endosperm of barley grain. The purified barley (1,4)-β-d-glucan exohydrolase isozyme βII was found to hydrolyze the cyanogenic β-d-glucosides, epiheterodendrin and dhurrin. Molecular modelling of its active site based on the crystal structure of linamarase from white clover, demonstrated that the disposition of the catalytic active amino acid residues was structurally conserved. Epiheterodendrin stimulated appressoria and appressorial hook formation of B. graminis in vitro, suggesting that loss of cyanogenesis in barley leaves has enabled the fungus to utilize the presence of epiheterodendrin to facilitate host recognition and to establish infection.     

Prehistory of plant growing and collecting in northern Italy, based on seed remains from the early Neolithic to the Chalcolithic (c. 5600–2100 cal b.c.)

The stages of the early Neolithic and the spread of agriculture in northern Italy are difficult to determine and basically still unclear, since this region was influenced by deeply different cultures coming from both the Mediterranean coasts and the Balkans. The complex interrelations due to the contributions from both cultures are reinterpreted here thanks to recent data, modifying a picture which 15 years ago was believed to be definite. According to radiocarbon chronology, the appearance of the earliest farming communities in northern Italy should be dated around 5600–5500 cal b.c. Early farmers cultivated several cereal and pulse taxa, of which the more important were Hordeum vulgare/distichum, Triticum dicoccum, T. monococcum, T. aestivum/durum/turgidum, Lens culinaris and Pisum sp. In addition they gathered many wild plants. The spread of agriculture was a rapid phenomenon and within a few centuries agriculture was established into the Alps. Little is known about the middle and late Neolithic, with the Square-mouthed pottery culture “Bocca Quadrata”, from c. 5100 cal b.c. onwards, since most of the archaeological features discovered up to the present have produced only a few plant remains. We demonstrate the introduction of poppy and a few other innovations like a slightly increased cultivation of free-threshing cereals and flax. Archaeobotanical analyses from Chalcolithic or Copper Age settlements, from c. 3500 cal b.c. onwards, are even scarcer and a comparison with the earlier Neolithic settlements does not yet seem possible.     

T’ef (<Emphasis Type="Italic">Eragrostis tef</Emphasis>) in Ancient Agricultural Systems of Highland Ethiopia

T’ef ( Eragrostis tef ) in Ancient Agricultural Systems of Highland Ethiopia. T’ef (Eragrostis tef) has been cultivated in the Horn of Africa for at least 2,000 years. The earliest known agricultural systems in this region date to the Pre-Aksumite period (800–400 b.c.) and appear to have focused on Near Eastern crops, with indigenous African species increasing in importance during Aksumite times (400 b.c.–a.d. 700). While palaeoethnobotanical data are available from Pre-Aksumite and late Aksumite periods, macroscopic botanical remains from the site of Ona Nagast, northern Ethiopia, provide a first glimpse of agricultural systems dating to Proto-Aksumite (400–50 b.c.), Early to Classic (50 b.c.–a.d. 340), and Post-Aksumite (a.d. 700–900) times. Archaeological t’ef remains from Ona Nagast are examined in detail. Guidelines are developed for the identification of t’ef grains preserved on archaeological sites, with a focus on how to differentiate them from seeds of wild Eragrostis species. Charring experiments reveal that in some cases t’ef may not survive high temperatures tolerated by larger cereal grains, such as wheat and barley. The domestication history of t’ef appears to be different from some other cereals, a factor which may explain the preponderance of indeterminate Eragrostis seeds in archaeological samples. Selection of large seed size and intensified tillage were not key factors in t’ef domestication. Early cultivators were likely selecting for increased branching and higher percentage seed set under conditions of minimal tillage.     

An efficient somatic embryogenesis system for velvet bean [<Emphasis Type="Italic">Mucuna pruriens</Emphasis> (L.) DC.]: a source of anti Parkinson’s drug

The Mucuna pruriens Linn. is an important medicinal legume cover crop. Almost all the parts of the plant are reported to contain l-3,4-dihydroxy phenylalanine (l-DOPA), a non-protein amino acid that acts as precursor for the neurotransmitter dopamine. Here we report a rapid and reliable protocol for high fidelity regeneration of M. pruriens plants via somatic embryogenesis. Embryogenic callus was induced from cotyledon segments of in vitro grown seedlings on Murashige and Skoog medium supplemented with 6.7 μM 2,4-dichlorophenoxy-acetic acid (2,4-D). High-frequency somatic embryogenesis was achieved after transfer of embryogenic callus clumps to MS medium supplemented with 2.3 μM Kinetin (Kn) and 5.4 mM α-naphthaleneacetic acid (NAA) supplemented with 13.6 μM adenine sulphate. The maximum number of cotyledonary-stage embryos (60.5 ± 12.7) was obtained after 10 weeks. Mature somatic embryos were converted to plantlets on half strength MS basal medium with 90% survival rate in the field condition. The whole process required 12–16 weeks of culture for completion of all steps of plant regeneration. The protocol should provide an efficient means for large-scale cultivation and in vitro manipulation of M. pruriens, an important green manure cover-crop with medicinal properties.     

The diet of Eneolithic (Copper Age, Fourth millennium cal b.c.) pile dwellers and the early formation of the cultural landscape south of the Alps: a case study from Slovenia

Analyses were performed of plant remains from the Late Neolithic (in Slovenian terminology corresponding to Eneolithic or Copper Age, ca. 4300–2300 b.c.) pile dwelling Hočevarica in the Ljubljansko barje (Ljubljana Moor), Slovenia. This settlement existed between ca. 3650 and 3550 cal b.c. Seeds, fruits, wooden piles, macroscopic charcoal and pollen from the cultural layers were analysed. The remains of domestic plants such as charred grains of Hordeum vulgare (barley), Triticum monococcum, T. dicoccum (einkorn and emmer wheat) and Papaver somniferum (poppy seeds), as well as seeds of weeds such as Chenopodium album-type indicate early cultivation in the area. In addition, numerous remains of nuts and berries, especially of Quercus sp., Cornus mas, Rubus fruticosus and Corylus avellana demonstrate that the gathering of wild plants was an important part of subsistence. Palaeoecological and archaeobotanical data from Hočevarica further suggest that cleared land was used for agriculture and pastures during the Neolithic, and that different wood was cut for construction and for fuel. The species assemblage from Hočevarica is very similar to those recovered from northern Alpine lake dwelling sites, however, several new taxa (e.g. Lathyrus sativus, Vicia sp.) appear in the assemblage. One of the most surprising finds is the seed of wild grape (Vitis vinifera ssp. sylvestris), which are the oldest on-site remains of grapevine from Slovenia.     

Changes in cereal cultivation during the Iron Age in southern Sweden: a compilation and interpretation of the archaeobotanical material

Macrofossil data from 73 sites dating to the south Swedish Iron Age (500 b.c.–a.d. 1100) have been compiled and analyzed in order to elucidate long term changes in cereal cultivation. The analyses indicate that “permanent field” agriculture was established at the end of the Bronze Age utilizing Hordeum vulgare var vulgare as a primary crop and Triticum aestivum ssp vulgare/compactum, Triticum spelta/dicoccum/monococcum, Avena sativa and Secale cereale as secondary crops. An observed change towards the end of Roman Iron Age (1–a.d. 400) is the expansion of Secale cereale and Avena sativa cultivation. Evidence also suggests that winter sowing of the former commenced at the latest during the eighth, ninth and tenth centuries a.d. The introduction of winter sowing possibly coincided with the establishment of crop rotation agriculture. During most of the Iron Age southern Sweden displays significant regional variations with regards to cereal cultivation practice. There is however evidence that a more homogenous agriculture appeared across the investigated area from the beginning of the Viking Age (a.d. 800–1100) onwards.     

Identification and verification of QTLs for agronomic traits using wild barley introgression lines

A set of 39 wild barley introgression lines (hereafter abbreviated with S42ILs) was subjected to a QTL study to verify genetic effects for agronomic traits, previously detected in the BC₂DH population S42 (von Korff et al. 2006 in Theor Appl Genet 112:1221–1231) and, in addition, to identify new QTLs and favorable wild barley alleles. Each line within the S42IL set contains a single marker-defined chromosomal introgression from wild barley (Hordeum vulgare ssp. spontaneum), whereas the remaining part of the genome is exclusively derived from elite spring barley (H. vulgare ssp. vulgare). Agronomic field data of the S42ILs were collected for seven traits from three different environments during the 2007 growing season. For detection of putative QTLs, a two-factorial mixed model ANOVA and, subsequently, a Dunnett test with the recurrent parent as a control were conducted. The presence of a QTL effect on a wild barley introgression was accepted, if the trait value of a particular S42IL was significantly (P < 0.05) different from the control, either across all environments and/or in a particular environment. A total of 47 QTLs were localized in the S42IL set, among which 39 QTLs were significant across all tested environments. For 19 QTLs (40.4%), the wild barley introgression was associated with a favorable effect on trait performance. Von Korff et al. (2006 in Theor Appl Genet 112:1221–1231) mapped altogether 44 QTLs for six agronomic traits to genomic regions, which are represented by wild barley introgressions of the S42IL set. Here, 18 QTLs (40.9%) revealed a favorable wild barley effect on the trait performance. By means of the S42ILs, 20 out of the 44 QTLs (45.5%) and ten out of the 18 favorable effects (55.6%) were verified. Most QTL effects were confirmed for the traits days until heading and plant height. For the six corresponding traits, a total of 17 new QTLs were identified, where at six QTLs (35.3%) the exotic introgression caused an improved trait performance. In addition, eight QTLs for the newly studied trait grains per ear were detected. Here, no QTL from wild barley exhibited a favorable effect. The introgression line S42IL-107, which carries an introgression on chromosome 2H, 17–42 cM is an example for S42ILs carrying several QTL effects simultaneously. This line exhibited improved performance across all tested environments for the traits days until heading, plant height and thousand grain weight. The line can be directly used to transfer valuable Hsp alleles into modern elite cultivars, and, thus, for breeding of improved varieties.     

Light regulation of light‐harvesting antenna size substantially enhances photosynthetic efficiency and biomass yield in green algae†

One of the major factors limiting biomass productivity in algae is the low thermodynamic efficiency of photosynthesis. The greatest thermodynamic inefficiencies in photosynthesis occur during the conversion of light into chemical energy. At full sunlight the light‐harvesting antenna captures photons at a rate nearly 10 times faster than the rate‐limiting step in photosynthetic electron transport. Excess captured energy is dissipated by non‐productive pathways including the production of reactive oxygen species. Substantial improvements in photosynthetic efficiency have been achieved by reducing the optical cross‐section of the light‐harvesting antenna by selectively reducing chlorophyll b levels and peripheral light‐harvesting complex subunits. Smaller light‐harvesting antenna, however, may not exhibit optimal photosynthetic performance in low or fluctuating light environments. We describe a translational control system to dynamically adjust light‐harvesting antenna sizes for enhanced photosynthetic performance. By expressing a chlorophyllide a oxygenase (CAO) gene having a 5′ mRNA extension encoding a Nab1 translational repressor binding site in a CAO knockout line it was possible to continuously alter chlorophyll b levels and correspondingly light‐harvesting antenna sizes by light‐activated Nab1 repression of CAO expression as a function of growth light intensity. Significantly, algae having light‐regulated antenna sizes had substantially higher photosynthetic rates and two‐fold greater biomass productivity than the parental wild‐type strains as well as near wild‐type ability to carry out state transitions and non‐photochemical quenching. These results have broad implications for enhanced algae and plant biomass productivity.     

The Horn of Africa as a centre of barley diversification and a potential domestication site

According to a widely accepted theory on barley domestication, wild barley (Hordeum vulgare ssp. spontaneum) from the Fertile Crescent is the progenitor of all cultivated barley (H. vulgare ssp. vulgare). To determine whether barley has undergone one or more domestication events, barley accessions from three continents have been studied (a) using 38 nuclear SSR (nuSSRs) markers, (b) using five chloroplast SSR (cpSSR) markers yielding 5 polymorphic loci and (c) by detecting the differences in a 468 bp fragment from the non-coding region of chloroplast DNA. A clear separation was found between Eritrean/Ethiopian barley and barley from West Asia and North Africa (WANA) as well as from Europe. The data from chloroplast DNA clearly indicate that the wild barley (H. vulgare ssp. spontaneum) as it is found today in the “Fertile Crescent” might not be the progenitor of the barley cultivated in Eritrea (and Ethiopia). Consequently, an independent domestication might have taken place at the Horn of Africa. Jihad Orabi and Gunter Backes have contributed equally to this work.     

d-lactic acid production from cellooligosaccharides and β-glucan using l-LDH gene-deficient and endoglucanase-secreting Lactobacillus plantarum

In order to achieve direct fermentation of an optically pure d-lactic acid from cellulosic materials, an endoglucanase from a Clostridium thermocellum (CelA)-secreting plasmid was introduced into an l-lactate dehydrogenase gene (ldhL1)-deficient Lactobacillus plantarum (∆ldhL1) bacterial strain. CelA expression and its degradation of β-glucan was confirmed by western blot analysis and enzyme assay, respectively. Although the CelA-secreting ∆ldhL1 assimilated cellooligosaccharides up to cellohexaose (although not cellotetraose), the main end product was acetic acid, not lactic acid, due to the conversion of lactic acid to acetic acid. Cultivation under anaerobic conditions partially suppressed this conversion resulting in the production of 1.27 g/l of D-lactic acid with a high optical purity of 99.5% from a medium containing 2 g/l of cellohexaose. Subsequently, D-lactic acid fermentation from barley β-glucan was carried out with the addition of Aspergillus aculeatus β-glucosidase produced by recombinant Aspergillus oryzae and 1.47 g/l of D-lactic was produced with a high optical purity of 99.7%. This is the first report of direct lactic acid fermentation from β-glucan and a cellooligosaccharide that is a more highly polymerized sugar than cellotriose.     

Thidiazuron promotes in vitro regeneration of wheat and barley

Summary Thidiazuron (TDZ) is a substituted phenylurea which has been shown to be an efficacious regulator of in vitro morphogenesis of many dicot plant species. However, information regarding the effect of TDZ on in vitro regeneration of monocot species is limited. We investigated the effects of TDZ on in vitro regeneration of barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.) and found that it promoted shoot regeneration from callus in these two important cereal species. Plant regeneration from calluses derived from immature embryo culture of barley and wheat was observed in regeneration media with a wide range of TDZ concentrations (0.045–45 μM). Shoot regeneration from barley calluses was the highest (38.3% for cv. Golden Promise) at 4.5 μM (1 mg l⁻¹) TDZ, while the optimal TDZ level for wheat regeneration seemed to be 0.9 μM (0.2 mg l⁻¹) (87% for cv. Bob White and 49.4% for cv. Hi Line). Roots developed normally when the regenerated wheat and barley shoots from TDZ-containing media were transferred to the rooting medium. Comparison with other plant growth regulators commonly used in wheat and barley regeneration media suggested that TDZ was among the best for in vitro regeneration of wheat and barley. Both authors contributed equally     

A role for arabinogalactan-proteins in root epidermal cell expansion

Arabinogalactan-proteins (AGPs) are abundant plant proteoglycans that react with (β-d-Glc)₃ but not (β-d-Man)₃ Yariv reagent. We report here that treatment with (β-d-Glc)₃ Yariv reagent caused inhibition of root growth of Arabidopsis thaliana (L.) Heynh. seedlings. Moreover, the treated roots exhibited numerous bulging epidermal cells. Treatment with (β-d-Man)₃ Yariv reagent did not have any such effects. These results indicate a role for AGPs in root growth and control of epidermal cell expansion. Because treatment with (β-d-Glc)₃ Yariv reagent phenocopies the reb1 (root epidermal cell bulging) mutant of Arabidopsis, AGPs were extracted from the reb1-1 mutant and compared with those of the wild type. The reb1-1 roots contained an approximately 30% lower level of AGPs than the wild type. More importantly, while the profile of AGPs from wild-type roots showed two major peaks upon crossed electrophoresis, the profile of AGPs from reb1-1 roots exhibited only one of the major peaks. Therefore, the reb1 phenotype appears to be a result of defective or missing root AGPs. Taken together, this pharmacological and genetic evidence strongly indicates a function of AGPs in the control of root epidermal cell expansion. Received: 13 February 1997 / Accepted: 1 April 1997     

Palaeoecological studies at the Kaliakra area, northeastern Bulgarian Black Sea coast: 6000?years of natural and anthropogenic change

A 7.5 m sediment core from Lake Bolata, a small former coastal liman lake in northeastern Bulgaria, was analyzed for pollen and plant macrofossil content in attempt to trace the changes in the vegetation, human impact and the influence of the Black Sea during the last ca. 6,000 years. Lake Bolata started its existence when the rising Black Sea level reached the elevation of the bottom of the depression. By that time nearly all tree species were already present in this area with the exception of Carpinus orientalis. The comparison of the arrival time of oriental hornbeam at different sites along the Bulgarian Black Sea confirmed the reliability of the local radiocarbon chronology. For the period under study the vegetation of the region around the site can be described as a forest-steppe due to NAP values higher than 40% of the pollen sum. Forests on the slopes of the river canyon consisted of Quercus spp., Acer, Carpinus orientalis, Fraxinus ornus, Fagus and possibly Tilia. Riverine forests formed stands composed of Salix, Alnus, Ulmus, Fraxinus, Carpinus betulus and Vitis as a liana. The vegetation on the Cape Kaliakra plateau, bordering the canyon, was dominated by diverse herbs and most of these could be considered xerophytes. The oldest occupation period belongs to the Eneolithic, documented by the occurrences of Triticum-type pollen at 5570–5170 cal b.p. (3620–3220 b.c.). The next period of higher continuous Cerealia-type values corresponds to 3450–1830 cal b.p. (1500 b.c.–a.d. 120). The macrofossil record chiefly provides evidence about plant communities of aquatics and helophytes.     

Nuclear DNA content of <Emphasis Type="Italic">Hydrastis canadensis</Emphasis> L. and genome size stability of in vitro regenerated plantlets

Knowing the genome size is an important step towards deciding and planning for genome sequencing of a given species. Using flow cytometry, nuclear DNA content of Hydrastis canadensis was estimated, and genome size stability of its in vitro regenerated plantlets were assessed. The nuclear DNA content of H. canadensis was estimated to be 2.62 ± 0.020 pg/2C. This is the first report to estimate nuclear DNA content of H. canadensis; therefore this study provides valuable information that will facilitate genome sequencing and subsequent molecular studies of this economically important medicinal plant. Comparison of genome size between in vitro regenerated (explant source was from wild plants) and wild plants of H. canadensis did not reveal any significant difference (P ≤ 0.05) in nuclear DNA content. This suggests that micropropagation of H. canadensis, even after numerous sub-culturing and long-term culture periods produced in vitro plantlets with a stable genome size. These results provide further evidence that micropropagation techniques have the potential to be used as a source of planting stock, along with seeds, for restoring locally threatened H. canadensis wild populations and for commercial cultivation to supply the growing herbal market.     

Natural Variation in Grain Selenium Concentration of Wild Barley, <Emphasis Type="Italic">Hordeum spontaneum</Emphasis>, Populations from Israel

Wild barley (Hordeum spontaneum), the progenitor of cultivated barley, is an important genetic resource for cereal improvement. Selenium (Se) is an essential trace mineral for humans and animals with antioxidant, anticancer, antiarthropathy, and antiviral effects. In the current study, the grain Se concentration (GSeC) of 92 H. spontaneum genotypes collected from nine populations representing different habitats in Israel was investigated in the central area of Guizhou Province, China. Remarkable variations in GSeC were found between and within populations, ranging from 0 to 0.387 mg kg⁻¹ among the 92 genotypes with an average of 0.047 mg kg⁻¹. Genotype 20_C from the Sede Boqer population had the highest GSeC, while genotype 25_1 from the Atlit population had the lowest. The mean value of GSeC in each population varied from 0.010 to 0.105 mg kg⁻¹. The coefficient of variation for each population ranged from 12% to 163%. Significant correlations were found between GSeC and 12 ecogeographical factors out of 14 studied. Habitat soil type also significantly affected GSeC. The wild barley exhibited wider GSeC ranges and greater diversity than its cultivated counterparts. The higher Se grain concentrations found in H. spontaneum populations suggest that wild barley germplasm confer higher abilities for Se uptake and accumulation, which can be used for genetic studies of barley nutritional value and for further improvement of domesticated cereals.     

The draft genome of a wild barley genotype reveals its enrichment in genes related to biotic and abiotic stresses compared to cultivated barley

Wild barley (Hordeum spontaneum) is the progenitor of cultivated barley (Hordeum vulgare) and provides a rich source of genetic variations for barley improvement. Currently, the genome sequences of wild barley and its differences with cultivated barley remain unclear. In this study, we report a high‐quality draft assembly of wild barley accession (AWCS276; henceforth named as WB1), which consists of 4.28 Gb genome and 36 395 high‐confidence protein‐coding genes. BUSCO analysis revealed that the assembly included full lengths of 95.3% of the 956 single‐copy plant genes, illustrating that the gene‐containing regions have been well assembled. By comparing with the genome of the cultivated genotype Morex, it is inferred that the WB1 genome contains more genes involved in resistance and tolerance to biotic and abiotic stresses. The presence of the numerous WB1‐specific genes indicates that, in addition to enhance allele diversity for genes already existing in the cultigen, exploiting the wild barley taxon in breeding should also allow the incorporation of novel genes. Furthermore, high levels of genetic variation in the pericentromeric regions were detected in chromosomes 3H and 5H between the wild and cultivated genotypes, which may be the results of domestication. This H. spontaneum draft genome assembly will help to accelerate wild barley research and be an invaluable resource for barley improvement and comparative genomics research.     

Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing <Emphasis Type="Italic">Corynebacterium glutamicum</Emphasis>

Corynebacterium glutamicum wild type lacks the ability to utilize the pentose fractions of lignocellulosic hydrolysates, but it is known that recombinants expressing the araBAD operon and/or the xylA gene from Escherichia coli are able to grow with the pentoses xylose and arabinose as sole carbon sources. Recombinant pentose-utilizing strains derived from C. glutamicum wild type or from the l-lysine-producing C. glutamicum strain DM1729 utilized arabinose and/or xylose when these were added as pure chemicals to glucose-based minimal medium or when they were present in acid hydrolysates of rice straw or wheat bran. The recombinants grew to higher biomass concentrations and produced more l-glutamate and l-lysine, respectively, than the empty vector control strains, which utilized the glucose fraction. Typically, arabinose and xylose were co-utilized by the recombinant strains along with glucose either when acid rice straw and wheat bran hydrolysates were used or when blends of pure arabinose, xylose, and glucose were used. With acid hydrolysates growth, amino acid production and sugar consumption were delayed and slower as compared to media with blends of pure arabinose, xylose, and glucose. The ethambutol-triggered production of up to 93 ± 4 mM l-glutamate by the wild type-derived pentose-utilizing recombinant and the production of up to 42 ± 2 mM l-lysine by the recombinant pentose-utilizing lysine producer on media containing acid rice straw or wheat bran hydrolysate as carbon and energy source revealed that acid hydrolysates of agricultural waste materials may provide an alternative feedstock for large-scale amino acid production.