Cellulose-decomposing fungi of desert soils in Saudi Arabia

Seventy-five species in addition to 5 varieties of cellulose-decomposing which belong to 27 genera were collected during this investigation. Aspergillus (12 species + 4 varieties), Alternaria (4 species), Stachybotrys (3 species + 1 variety), and Penicillium (12 species) were of high frequency of occurrence, of which A. fumigatus, A. niger, A. terreus, A. alternata, A. tenuissima, S. atra, P. citrinum and P. corylophilum were the most common. Six genera were of moderate frequency and these were Botryotrichum (2 species), Macrophomina (1 species), Drechslera (5 species), Ulocladium (4 species), Chaetomium (7 species) and Curvularia (4 species) of which B. atrogriseum, D. spicifera, D. sativus, Ubotrytis, C. spirale and C. lunata were the most prevalent. Five and twelve genera were recovered on cellulose-Czapek's agar plates in low and rare frequency of occurrence, respectively.     

Revision of the lygaeid genus Nysius (Heteroptera: Lygaeidae: Orsillinae) of Japan,with description of a new species

Japanese species of the lygaeid–orsilline genus Nysius were revised, and five species including a new species, N. hidakai, were recognized. Male and female genitalia of all the species were illustrated, and a key to species of Japanese Nysius was provided. The DNA barcoding information of each species except N. expressus were recorded.     

珍稀濒危植物江南油杉群落乔木层主要树种种间关联性分析

基于2×2列联表,采用方差比率法(R_v)、x²检验、Pearson相关系数检验和Spearman秩相关系数检验等方法,对福建君子峰国家级自然保护区江南油杉(Keteleeria fortunei var. cyclolepis)群落乔木层主要树种进行种间关联性分析,并通过主成分分析(PCA)划分生态种组。结果表明,21种主要树种总体表现为不显著负关联,且江南油杉与其他物种多呈不显著相关。210个种对中,正相关的有110对,负相关的有81对,不相关的有19对,正负比1.36。绝大多数种对间呈不显著相关,显著率仅为0.48%,物种间相互独立。Pearson相关系数和Spearman秩相关系数检验结果具有一致性,负相关种对数大于正相关种对数,绝大多数种对不显著,显著率分别为6.19%和7.14%。与x²检验相比,Pearson相关系数和Spearman秩相关系数检验方式更加灵敏。运用PCA二维排序可将主要树种划分为4个生态种组,同一生态种组内物种的生态习性和资源需求相似,多呈正相关,种对间相互依赖共存;不同生态种组间物种多呈负...     

Annual survey of planktonic dinoflagellates and related cysts in the Gulf of Trieste (Northern Adriatic Sea)

Abstract

A survey of planktonic dinoflagellates and related cysts was carried out in the Gulf of Trieste throughout one year from April 1992 to March 1993. 113 taxa were recovered by the analysis of phytoplankton net samples. The most represented genera were Protoperidinium (34 species), Ceratium (24 species), Dinophysis (15 species), Gonyaulax (11 species) and Prorocentrum (8 species). A particular attention was given to potentially toxic species belonging to the genera Dinophysis, Alexandrium and Prorocentrum. The highest number of species (67 species) was recorded in July, and the lowest one (18 species) in February.

33 cyst morphotypes were recorded by the analysis of sediment samples. The most represented genera were Protoperidinium (8 morphotypes), Scrippsiella (3 morphotypes), Gonyaulax (3 morphotypes) and Alexandrium (2 morphotypes); the cysts most frequently found were those of Conyaulax polyedra and Alexandrium pseudogonyaulax.     

A study of fungal spore poupulations in the atmosphere of Kuwait

The fungal air-spora of Kuwait was investigated using the Petri-dish trapping technique. During the period from 1st April, 1974 to 30th June, 1975, a total of 3685 colonies were recorded from 2 % malt agar plates. Fifty-five genera and 116 species were identified. Alternaria occupied the first place in the order of percentage incidence, being represented by 18.3% of the entire catch, followed by Aspergillus (17.1%), Penicillium (14%), Cladosporium (13.6%), Drechslera (13.3%), and Ulocladium (7.1%). The widest spectrum of species was displayed by Aspergillus (possessed 19 species) followed by Penicillium (17 species), Alternaria (6 species), Drechslera (5 species), and Ulocladium (4 species). The monthly total number of fungi showed marked seasonal periodicity with the greatest number of colonies occurring in March–April and November. The lowest counts were recorded in mid-summer (July) and mid-winter (January). Only 220 colonies and 17 species of thermophilous fungi were reported from plates incubated at 45 °C. The most common species were Aspergillus fumigatus and A. terreus.     

基于可培养方法分析云南腾冲小空山火山谷芽胞杆菌分布特征

【目的】为了解云南腾冲小空山火山谷土壤中可培养芽胞杆菌种类分布特征。【方法】采用可培养手段对小空山火山谷阳坡、谷底和阴坡土壤中的芽胞杆菌进行分离培养,根据16S rRNA基因序列同源性对分离菌株进行鉴定,并分析系统发育地位。利用Canoco5软件分析采样点芽胞杆菌种类分布特征与土壤样品理化性质的相关性。【结果】从火山谷土壤样品中共分离获得180株芽胞杆菌,16S rRNA基因测序鉴定结果表明分离菌株隶属于芽胞杆菌纲2个科(芽胞杆菌科和类芽胞杆菌科)、6个属、34个种,其中芽胞杆菌属(Bacillus) 11个种,类芽胞杆菌属(Paenibacillus) 14个种,短芽胞杆菌属(Brevibacillus)3个种,赖氨酸芽胞杆菌属(Lysinibacillus)4个种,嗜冷芽胞杆菌属(Psychrobacillus)1个种和绿芽胞杆菌属(Viridibacillus)2个种,其中7个菌株与其最近模式菌株16SrRNA相似性低于种的界定阈值(98.65%),为芽胞杆菌潜在新物种。优势属为芽胞杆菌属和类芽胞杆菌属,优势种为蕈状芽胞杆菌(Bacillusmycoides),图瓦永芽胞杆菌(Bacillustoyonensis),蜡状芽胞杆菌(Bacilluscereus),解木糖赖氨酸芽胞杆菌(Lysinibacillusxylanilyticus),蜂房类芽胞杆菌(Paenibacillusalvei)和沙地绿芽胞杆菌(Viridibacillus arenosi)。其中16个种分离自阳坡,29个种分离自阴坡,9个种分离自谷底,三者共同种类为6种。阳坡、谷底和阴坡的芽胞杆菌种群分布Bray-Curtis相似性为62.4%,多样性分析结果表明,Shannon指数(H′)大小次序为阴坡阳坡谷底。环境因子分析发现,芽胞杆菌种群分布多样性特征与其土壤的海拔高度、碳氮比和硫含量呈负相关,而和碳源和氮源含量呈正相关。【结论】从以上结果得出,云南腾冲火山谷有着较为丰富的芽胞杆菌资源,且还存在可分离培养的芽胞杆菌的潜在新物种,为利用火山微生物资源提供了保障。     

Fungal flora of the digestive tract of 5 species of triatomines vectors of Trypanosoma cruzi,Chagas 1909

A study of the mycobiota in the digestive tract of 5 important species of triatomines, Triatoma brasiliensis, T. infestans, T. sordida, T. pseudomaculata and T. vitticeps, was made. The digestive tracts of 164 adults and 535 nymphs of those triatomines were studied and 393 fungal strains were isolated.The genera with the greatest number of species were Penicillium (19 species), Aspergillus (17 species) and Acremonium (5 species) and the most frequent species, in decreasing order, were Penicillium corylophilum, Aspergillus niger, Penicillium fellutanum, Cladosporium herbarum, Penicillium waksmanii, Aspergillus awamori and Paecilomyces variotii. Among the isolated fungi, we found species that are recognized as entomopathogenic and pathogenic for humans and animals.This revised version was published online in October 2005 with corrections to the Cover Date.     

Assessment of Water Pollution using Diatom Community Structure and Species Distribution — A Case Study in a Tropical River Basin

A study on biological assessment of water pollution using diatom community structure and species distribution was carried out in the Linggi River Basin, Malaysia which was polluted by various urban, industrial and agricultural wastes. A total of 86 diatom taxa belonging to 21 genera were recorded from all eight sampling stations located in the basin, of which 70 species were found on artificial substrates; the remaining 16 species were recorded exclusively on natural substrates. The number of diatom species observed between the stations varied from 22-47 species. The dominant diatom species in decreasing order of abundance were Eunotia vanheurckii, Nitzschia palea, Achnanthes saxonica, Gomphonema parvulum and Achnanthes minutissima. The most common clean water species were Achnanthes minutissima, A. linearis and Synedra rumpens. The most tolerant species were Nitzschia palea followed by Gomphonema parvulum and Pinnularia braunii. Eunotia vanheurckii and Navicula cryptocephala occurred in high densities at both unpolluted and polluted stations and can be considered as the common facultative or indifferent species. Although a large number of species were recorded at the unpolluted stations, equivalent number of species were also found at the moderately polluted stations. However, the number of species was reduced at grossly polluted stations. Nevertheless, a marked variation in species association exists between the unpolluted and polluted stations, but not among the polluted stations to distinguish the type and degree of pollution.     

Biogeographic Patterns of Intertidal Macroinvertebrates and their Association with Macroalgae Distribution along the Portuguese Coast

Geographical patterns in the distribution of epifaunal crustaceans (Amphipoda, Isopoda and Tanaidacea) occurring with dominant macroalgal species were investigated along the Portuguese rocky coast. Three regions, each encompassing six shores, were studied. Algal species were selected according to their geographical distribution: Mastocarpusstellatus and Chondrus crispus (north); Bifurcariabifurcata (north-centre); Plocamiumcartilagineum and Cystoseiratamariscifolia (centre-south); Corallina spp. and Codiumtomentosum (entire coast). Multivariate techniques were used to test for differences in crustacean assemblage composition between sub-regions and host algal species. A clear gradient of species substitution was observed from north to south. Differences in abundance and diversity of epifaunal crustaceans were observed between southern locations and the remaining sites. Four species were recorded for the first time in the Portuguese coast. Among the 57 taxa identified, southern distribution limits were observed for three species and northern distribution limits were observed for four species. Interestingly, the observed geographical patterns in epifaunal abundance and diversity were not related with geographical changes in the indentity of the dominant algal species.     

Keratinophilic fungi of poultry farm and feather dumping soil in Tamil Nadu,India

Soils of 10 poultry farms from Namakkal and 12 feather dumping sites from Chennai were studied for the presence of keratinophilic fungi. A total of 34 species belonging to 19 genera and one non-sporulating fungus were recovered. Sixteen species of fungi and one non-sporulating fungi were common to both sites, eight species were specific to Namakkal and nine species were specific to Chennai. Dermatophytes and closely related fungi were represented by six species belonging to five genera. Fungal species commonly found in the soil samples included Chrysosporium keratinophilum (73%), Trichophyton mentagrophytes (68.2%), Microsporum gypseum (64%), Myceliopthora vellerea (32%), Chrysosporium state of Arthroderma tuberculatum (27.3%) and Geomyces pannorum (23%). Non-dermatophyte fungi were represented by 28 species belonging to 14 genera and one non-sporulating fungus.     

Survey of the mycoflora of barley grains in Egypt

The fungi of 40 samples of barley grains collected from Upper Egypt were estimated using the dilution- and the grain-plate methods. 33 genera and 109 species, in addition to 2 varieties of Aspergillus nidulans, one variety of Aspergillus flavus and one variety of Penicillium cyclopium were identified. The spectrum of fungal genera and species collected by the grain-plate method (29 genera and 94 species+3 varieties) was broader than by the dilutionplate method (27 genera and 71 species+3 varieties), but the order of frequency of occurrence of fungal genera and species was basically similar in the two methods. The most frequent genera were Aspergillus (25 species+3 varieties), Penicillium (32 species+1 variety), Rhizopus (2 species), Alternaria (2 species), Fusarium (6 species) and Drechslera (5 species) and were represented (as assayed by the grainplate method) in 100 %, 77.5 %, 85 % 62,5 %, 60 % and 52.5 % of the samples constituting 60.4 %, 10.2 %, 7.7 %, 3.7 %, 5 % and 2.3 % of the gross total count of fungi respectively. From the preceding genera A. niger, A. fumigatus, A. flavus, A. sydowii, P. notatum, P. citrinum, F. oxysporum, F. moniliforme, F. solani, R. stolonifer, A. alternata and D. spicifera were the most frequent.     

Composition of the fungal flora of four cereal grains in Saudi Arabia

Using the grain-plate method and on glucose-Czapek's agar at 28°C, fifty-eight species belonging to 26 genera were collected from barley (42 species and 19 genera), maize (29 species and 16 genera), sorghum (32 species and 17 genera) and wheat grains (42 species and 18 genera).The most frequent genera were Aspergillus, Penicillium, Rhizopus, Fusarium, and Mucor followed by Alternaria, Drechslera, and Curvularia. From the preceding genera Aspergillus flavus, A. niger, Penicillium notatum, Rhizopus stolonifer, Fusarium moniliforme, Mucor racemosus, Alternaria alternata, Drechslera spicifera, and Curvularia lunata were the most prevalent species in the four types of grains tested.     

Diversity and Coexistence of Ectoparasites in Small Rodents in a Tropical Dry Forest

To understand the mechanisms driving species diversity is central to community ecology. Here, we explored if habitat partitioning is associated with a species‐rich ectoparasite community in small rodents from a tropical dry forest in western Mexico. We trapped 199 mice in three 0.5 ha‐plots from eight small rodent species for every two months, from July 2011 to April 2012, and collected their ectoparasites. We identified 17 species of mites, two sucking lice species, two phoretic species, and one commensal species. The most abundant ectoparasite species was Steptolaelaps liomydis, representing 42 percent of all ectoparasites collected; seven ectoparasite species had < 10 individuals. Eighteen ectoparasite species (of 22 species) were collected from the most abundant rodent Liomys pictus. C‐score and the number of checkerboard species pairs were significantly higher against a random expectation. Ectoparasite species in L. pictus mice showed host microhabitat partitioning; Fahrenholzia ehrlichi and Fahrenholzia texana were found only in the anterior dorsal area, Ornithonysus sp. occurred along the dorsal part, Ixodes species were restricted to the ears, and Steptolaelaps liomydis was found throughout the body. We also identified ectoparasite communities with distinct species composition in two rodent species that use contrasting macrohabitats (L. pictus, strictly terrestrial; Peromyscus perfulvus, mostly arboreal). The remaining and low abundant rodent species showed a species‐poor ectoparasite community composition. We conclude that habitat partitioning at both macro and microhabitat scales appeared to characterize the species‐rich ectoparasite community. Conversely, most rodent host species with low abundances showed a species‐poor ectoparasite community.     

Incidence of dermatophytes and cyclohexamide resistantfungi on healthy children hairs and nails in nurseries

In order to estimate the prevalence of dermatophytes and other fungi on healthy children hairs and nails, 92 hair samples and 85 nail samples (groups of 10 finger nails from each child) were collected from 5 nurseries (children aged 9 months up to 4 years) in Assiut city. From hair samples 22 species were collected, Trichophyton (2 species) and Microsporum (2 species) were the only recovered dermatophytes in addition to well known keratinophilic genus Chrysosporium (4 species). From nail samples, 18 species were identified, Trichophyton was represented by 4 species, Microsporum, 2 species and Chrysosporium, 4 species. Also, several other saprophytes and cycloheximide resistant fungi were isolated. This revised version was published online in June 2006 with corrections to the Cover Date.     

Nearest neighbour analysis of spatial dispersion of intertidal prosobranch gastropods within two substrata

Summary The patterns of dispersion of Nerita atramentosa, Bembicium nanum and Cellana tramoserica within two major substrata, the encrusting alga Peyssonelia gunniana and bare rock were analysed from quadrat samples taken at low tide, over 1 year. Distances to the nearest members of each species from random points were analysed to determine spatial patterns of dispersion. The frequencies of nearest neighbours of each species to each animal in the sampled area were analysed to determine the degree of spatial segregation and symmetry in the three species. Nerita atramentosa and Bembicium nanum showed significant aggregated (clumped) dispersion in both substrata. Cellana tramoserica, however, was dispersed at random on Peyssonelia, and regularly dispersed on bare rock. There was no correlation between index of dispersion and density, or time of year, in any species. No useful tests for segregation and symmetry between Cellana and the other two species could be made because of the difference in dispersion of this species. Nerita and Bembicium were significantly segregated on both substrata, indicating that the microhabitat requirements of the two species are different. The two species were symmetrical on both substrata, indicating that there is no tendency for members of one species to be more isolated than members of the other species.Possible explanations of the differences in spatial pattern shown by the three species are discussed, and experimentally testable hypotheses are proposed to clarify the importance of physical and biological factors in the spatial patterns of distribution of the three species.     

Microscale distribution patterns in high Arctic soil microarthropod communities: the influence of plant species within the vegetation mosaic

We tested the hypothesis that within a relatively homogeneous vegetation type the spatial configuration of different plant species may be a determining factor in the composition of the soil animal communities. Six vascular plant species (Luzula confusa, Dryas octopetala, Cassiope tetragona, Salix polaris, Silene acaulis and Saxifraga opposigifolia), growing within high Arctic Saxifraga‐lichen heath vegetation, showed different distributional patterns. Luzula confusa and S. polaris were ubiquitous throughout while D. octopetala and C. tetragona had the most scattered distributions. Soil microarthropod density varied significantly among plant species from 18 000 (S. polaris) to 42 000 m^?2 (S. acaulis). Few significant numerical interrelationships were found between the population densities of the different Collembola or cryptostigmatic mite species or between microarthropod densities and variation in the physical properties of the soil associated with each plant species. However, despite the high similarity of species present, Discriminant Analysis idengified distinct microarthropod assemblages associated with each plant species. Over 70% of microarthropod samples taken from soil beneath S. polaris or L. confusa were correctly classified. Rank order of animal species abundance, however, varied among plant species. The collembolan Folsomia quadrioculata ranked first in five of the six plant species but the mite Camisia anomia was numerically dominant under S. polaris. The second most abundant species was much more variable. Despite these variations, the shape of the species rank abundance curve for microarthropods was remarkably similar for all plant species, with rank one and two species comprising ca 55 and 27% of the fauna respectively. These conclusions were reinforced by χ² analysis which idengified significantly distinct faunal communities between each plant species. Those microarthropod species contributing most to these between‐plant differences, as measured by higher or lower than expected populations, were idengified and were shown to be not always the most abundant species. Thus, on a local scale plants of different species were shown to act as useful proxy indicators of soil conditions that affect the soil microarthropod community. This should be taken into account when designing sampling programmes for soil invertebrates.     

黑龙江省蜜环菌生物种的地理分布概况

自1999年至2002年间对黑龙江省境内几个主要林区中的蜜环菌生物种进行了调查、采集和鉴定,并对其寄主种类和子实体发生规律以及地理分布特点进行了总结分析。结果表明:黑龙江省境内至少存在5个蜜环菌生物种,即芥黄蜜环菌Armillaria sinapina,高卢蜜环菌A.gallica,黄盖蜜环菌A.luteopileata,奥氏蜜环菌A.ostoyae和中国生物种F;寄主包括10个针叶和阔叶树种;与其他几种蜜环菌生物种相比较,A.gallica是黑龙江省境内出现概率最大的一个生物种;根据采集经验发现,温度和湿度是影响子实体发生的主要因子。     

Development of novel microsatellite markers for the grassland species Lolium multiflorum,Lolium perenne and Festuca pratensis

Twelve microsatellite markers were isolated from Lolium multiflorum. Allelic variability and cross‐species amplification were assessed on 16 individuals of each of the three grassland species L. multiflorum, Lolium perenne and Festuca pratensis. Cross‐species amplification success was 100% for L. perenne and 83% for F. pratensis. The number of alleles detected ranged from one to 14 with an average of 3.4. While three microsatellite loci were polymorphic in all three species, one marker produced species‐specific alleles in all three species. These microsatellite markers provide a valuable tool for population genetic studies within and among species of the Festuca–Lolium complex.     

Geometric morphometrics for the taxonomy of 11 species of Anopheles (Nyssorhynchus) mosquitoes

The subgenus Anopheles (Nyssorhynchus) (Diptera: Culicidae) includes the primary vectors of Plasmodium spp. in Colombia. Most adult females of this subgenus are difficult to identify in the field using the available keys. With the objective of further investigating the discriminatory power of modern morphometrics, both landmark‐based and outline‐based approaches were explored using the wing venation geometry of 11 Anopheles (Nyssorhynchus) species. Wing shape was able to separate the closest species of the subgenus. When the 11 species were analysed together, validated classification scores on average 5.3–8.6 times higher than those expected by chance were observed. These scores computed from the total sample of 11 species were not satisfactory for the recognition of Anopheles benarrochi B, Anopheles oswaldoi s.l. and Anopheles strodei. These sibling species were captured in sympatry. To improve the identification power of the morphometric tool, it was necessary to analyse these species separately from the remaining species. The best classification scores were obtained using a combination of 12 landmarks collected not only on the intersections of wing veins, but also on spots. An outline approach also gave excellent reclassification scores. Another pair of sibling species, collected in allopatry, Anopheles nuneztovari and Anopheles rangeli, also showed high classification scores.