New perspectives in hemiascomycetous yeast taxonomy

DNA sequencing has revolutionized yeast taxonomy. Although initially rDNA sequences proved to be universal and convenient for assigning phylogenetic relationships, it was eventually supplanted by multigene analysis, which provided more discriminating and robust results. This led to a new classification of the major yeast clades, which is still used as a reference today. More recently, the availability of a large number of complete genome sequences has given a new perspective on the molecular taxonomy of yeasts by providing a high number of genes to compare. It also highlighted an unexpected aspect of yeast genome evolution: the existence of interspecific hybrids outside of the industrial Saccharomyces clade. Together with the loss of heterozygosity in interspecific hybrids and a reduced sexuality leading to clonal propagation, this observation obliges us to reexamine the present concept of species. In parallel, the ongoing challenge is to find a universal molecular marker, to improve fast authentication and, if possible, phylogeny of yeasts. The future of yeast taxonomy will involve the sequencing of more genomes, thorough analysis of populations to obtain a good representation of the biodiversity and integration of these data into dedicated databases.     

Sequencing as a tool in yeast molecular taxonomy

The literature on sequencing as a tool for yeast molecular taxonomy is reviewed. Ribosomal DNA has been preferred for sequencing over other molecules such as mitochondrial DNA, and a large database is now available. rDNA consists of regions that evolve at different rates, allowing comparison of different levels of relationship among yeasts. Sequences of the 18S rDNA and the 25S rDNA have been largely used for yeast systematics and phylogeny, but the search for regions with increased resolving power has led to the study of the spacer regions of the rDNA. Few studies are concerned with signature sequences.     

Utilization of the hydrolytic activity in taxonomy of hyphal yeast ascomycetes

Species producing pseudohyphae and true hyphae and forming asci with endospores were included in the studied group of yeast-like microorganisms. These species belong taxonomically to various genera,i.e. Saccharomycopsis, Endomycopsis, Guilliermondiella, Arthroascus, Hormoascus etc. The groupCandida lipolytica was treated separately (Blagodarskaja and Kocková-Kratochvílová 1973). The verified phenotypes were compared using a numerical method and according to their hydrolytic activity.     

Urease activity in soils

Summary The availability of Ca from different levels of gypsum and calcium carbonate in a non-saline sodic soil has been investigated. Different levels of tagged gypsum (Ca⁴⁵SO₄.2H₂O) and calcium carbonate (Ca⁴⁵CO₃) (i.e. 0, 25, 50, 75, and 100 per cent of gypsum requirement) were mixed thoroughly in 3.5 Kg of a non-saline alkali soil (ESP, 48.4; ECe, 2.68 millimhos/cm). Dhaincha (Sesbania aculeata) — a legume and barley (Hordeum vulgare L.) — a cereal were taken as test crops. Increasing levels of gypsum caused a gradual increase in the yield of dry matter, content of Ca and K in the plant tops and Ca:Na and (Ca+Mg):(Na+K) ratios in both the crops. Application of calcium carbonate caused a slight increase in the dry matter yield, content of Ca and Mg and Ca:Na and (Ca+Mg):(Na+K) ratios in barley, however, in case of dhaincha there was no such effect. Gypsum application caused a gradual decrease in the content of Na and P in both the crops. Total uptake of Ca, Mg, K, N and P per pot increased in response to gypsum application. The effect of calcium carbonate application on the total uptake of these elements was much smaller on dhaincha, but in barley there was some increasing trend.Increasing application of tagged gypsum and calcium carbonate caused a gradual increase in the concentration and per cent contribution of source Ca in both the crops, although, the rate of increase was considerably more in dhaincha. The availability of Ca from applied gypsum was considerably more than that from applied calcium carbonate. Efficiency of dhaincha to utilize Ca from applied sources was considerably more (i.e. about five times) than that of barley     

Urease and extracellular nucleases of yeasts

Fifty-five representatives of yeast genera and 745 strains of large genera were tested with respect to the production of urease, extracellular RNAase and DNAase. The results made it possible to set up eight taxonomical classes of the yeasts. The taxonomical significance of the classification of these 8 classes is discussed.     

Review Properties and Applications of Urease

Urease is a highly efficient catalyst for the hydrolysis of urea with a rate approximately 10 14 times the rate of the noncatalyzed reaction. It has a long and distinguished history in the development of enzymology. In this work the properties of urease and its applications in biotechnology are reviewed, including urea content analysis in blood, urine, alcoholic beverages, natural water and environmental wastewaters; analysis of heavy metal content in natural waters, wastewaters and soil; determination of creatinine, arginine and IgG; urea removal from artificial kidney dialyzates, alcohol beverages and fertilizer wastewaters; wastewater reclamation for life support systems in space; pH control or shift for multi-enzyme reaction system; and urea hydrolysis as sources of ammonia or carbon dioxide in special cases. Future research trends are also outlined.     

Review Properties and Applications of Urease

Urease is a highly efficient catalyst for the hydrolysis of urea with a rate approximately 10 14 times the rate of the noncatalyzed reaction. It has a long and distinguished history in the development of enzymology. In this work the properties of urease and its applications in biotechnology are reviewed, including urea content analysis in blood, urine, alcoholic beverages, natural water and environmental wastewaters; analysis of heavy metal content in natural waters, wastewaters and soil; determination of creatinine, arginine and IgG; urea removal from artificial kidney dialyzates, alcohol beverages and fertilizer wastewaters; wastewater reclamation for life support systems in space; pH control or shift for multi-enzyme reaction system; and urea hydrolysis as sources of ammonia or carbon dioxide in special cases. Future research trends are also outlined.     

Urease activity inTrichophyton mentagrophytes

Urease activity was detected in the dermatophyteTrichophyton mentagrophytes cells at early exponential phase of growth. Specific activity of urease decreased with culture age. At exogenous urea concentrations above 2 mm formation of urease was inhibited. The pH optimum lay at 7–7.5, the K_m being 14 mm. No urease activity could be detected in cell-free culture fluid ofT. mentagrophytes. No endoor exocellular urease activity could be detected in aT. rubrum strain grown with or without urea.     

脲酶抑制剂氢醌对土壤脲酶活性,氨挥发和硝化的抑制动态

1.氢醌对土壤脲酶活性的抑制率及其持续的时间同氢醌浓度成正相关,与土壤脲酶活性成负相关。2.氢醌能有效地抑制施入土壤中尿素氨的挥发,而对铵盐和尿素的硝化强度产生强烈抑制。3.在麦秸还田土壤中,由于脲酶活性增高而提高了施入尿素的水解速度,故需提高氢醌用量;但由于麦秸的“氮因子效应”又固定了尿素分解产物及其氧化产物,从而弥补了氢醌失效后可能造成氮素的继续损失。     

A specification of numerical taxonomy: Thermodynamical taxonomy

Thermodynamic taxonomy (ThT) is established from both a theoretical and pragmatical point of view. An application of thermodynamic taxonomy is given.