一种新型亮氨酸5-羟化酶NmLEH的异源表达、纯化及酶学性质分析

羟基化氨基酸是一种新型氨基酸衍生物,可广泛用作化工材料的前体物及医药合成的中间体。将来源于Nostoc minutum的新型L-亮氨酸5-羟化酶(Nm LEH)通过重组质粒在大肠杆菌中异源表达。结果表明,在BL21 (DE3)宿主细胞中,诱导温度为25℃,IPTG诱导浓度为0. 5mmol/L,诱导10h时,蛋白质表达量最高(0. 45mg/ml);通过Ni-亲和层析和凝胶过滤层析两步分离纯化获得了高度纯化的重组Nm LEH蛋白;对Nm LEH的酶学性质进行了表征,该酶的最适反应温度为25℃,最适pH为7. 5,在pH 7. 0～9. 0较为稳定,最适底物为亮氨酸和甲硫氨酸;同源序列分析表明Nm LEH属于亚铁和α-酮戊二酸依赖性双加氧酶家族[Fe(II)/αKG-Dos],并预测了该酶的保守催化活性位点(H150、D152、H236);通过同源建模得到了该蛋白质的模拟结构,分析了该蛋白质催化活性中心的形成机制。     

纤维素降解菌Aspergillus sp. YN1的产酶条件及酶学特性

从牛羊粪堆肥中筛选出一株纤维素降解菌Aspergillus sp.YN1,主要研究了液体发酵培养基中碳源、氮源、培养温度、起始pH、通气量以及接种菌龄对菌株YN1的羧甲基纤维素酶活(CMC酶活)及滤纸酶活的影响。研究结果表明,在优化条件下,该菌的CMC酶活、滤纸酶活在培养第3天分别达到0.53U/mL和0.15U/mL。在酶学特性研究中,菌株YN1的CMC酶的最适反应温度为70°C,最适反应pH4.0(酶促反应为30min)。用不同温度处理1h或不同pH处理2h,YN1的CMC酶在30°C?50°C或pH3.0?4.0之间仍可保持80%以上的酶活性,对热及酸表现出较高的稳定性。     

一种新型亮氨酸5-羟化酶NmLEH的异源表达、纯化及酶学性质分析 *

羟基化氨基酸是一种新型氨基酸衍生物,可广泛用作化工材料的前体物及医药合成的中间体。将来源于Nostoc minutum的新型L-亮氨酸5-羟化酶 (NmLEH) 通过重组质粒在大肠杆菌中异源表达。结果表明,在BL21(DE3) 宿主细胞中,诱导温度为25℃,IPTG诱导浓度为0.5mmol/L,诱导10h时,蛋白质表达量最高 (0.45mg/ml);通过Ni-亲和层析和凝胶过滤层析两步分离纯化获得了高度纯化的重组NmLEH蛋白;对NmLEH的酶学性质进行了表征,该酶的最适反应温度为25℃,最适pH 为7.5,在pH 7.0~9.0较为稳定,最适底物为亮氨酸和甲硫氨酸;同源序列分析表明NmLEH属于亚铁和α-酮戊二酸依赖性双加氧酶家族[Fe(II)/αKG-Dos],并预测了该酶的保守催化活性位点(H150、D152、H236);通过同源建模得到了该蛋白质的模拟结构,分析了该蛋白质催化活性中心的形成机制。     

中度嗜盐菌Halobacillus sp. LY5的分离、鉴定及其胞外脂肪酶特性研究

利用吐温平板筛选法,从山西运城盐湖中分离获得一株高产胞外脂肪酶的中度嗜盐菌。通过形态学观察,生理生化特征及16S rRNA序列分析,初步鉴定并命名该菌为Halobacillus sp.LY5。酶学性质研究表明,该脂肪酶可在较宽温度范围内(30℃~90℃)保持高活力;在NaCl浓度为10%的反应缓冲体系(pH值8.0)中,温度为50℃时,酶活性最佳。金属离子除Fe3+外,对酶活性均具有明显的抑制作用;而EDTA和SDS亦可不同程度的抑制酶活性。结果表明LY5所产脂肪酶可能存在某些特殊性质。     

水杨酸和黄萎病菌毒素处理棉花愈伤组织使β-1，3-葡聚糖酶和几丁质酶的活性增加

不同品种棉花(Gossypium hirsutum L．)愈伤组织对黄萎病菌毒素粗提物的抗性与体内β-l,3-葡聚糖酶和几丁质酶活性水平有关。在毒素处理下,抗性品种比感性品种酶活性增加的幅度大、时间早。外源水杨酸(SA)处理后,棉花愈伤组织中的β-1,3-葡聚糖酶和几丁质酶活性增加。抗β-1,3-葡聚糖酶多克隆抗体与28 kD的蛋白条带有免疫交叉反应,毒素、SA、毒素 SA均能诱导该蛋白条带出现。     

中度嗜盐菌 Halomonas sp.BYS-1的渗透调节

Halomonassp BYS 1是一株从活性污泥中分离的中度嗜盐菌 ,它能在 0 1～ 2 6mol LNaCl的以苯乙酸为唯一碳源的基础培养基中生长。BYS 1在不同NaCl条件下生长时 ,胞内的Na 含量基本不发生变化 ;它主要通过积累K 、谷氨酸和甜菜碱来调节胞内外的渗透压平衡。当培养基中的NaCl浓度从 0 1mol L上升到 2 0mol L时 ,其胞内的K 、谷氨酸和甜菜碱分别提高了 1 9、 2 4和 1 3 6倍。     

邻单胞菌(Plesiomonas sp.90-1)降解直链烷基苯磺酸钠酶的诱导

在Plesiomonas sp.90-1中,降解直链烷基苯环酸钠(LAS)相关的酶为诱导酶.使用正交多因子法研究了细胞降解LAS酶活诱导的最佳条件为:细胞培养温度30℃,LAS诱导浓度10ppm,酵母膏0.008%,pH8.0,通气.在此条件下,LAS酶活比未经诱导者提高1.4倍.碳源的加入会阻遏LAS降解酶的活力形成.在所试氮源中,以(NH_4)H_2PO_4对LAS降解酶的形成最有利.低浓度的磷酸盐对LAS降解酶活形成无影响,但高浓度的磷酸盐对LAS降解酶活形成不利.利用微量检压技术发现经此条件诱导的细胞耗氧量上升2—3倍.     

一株假单胞菌(Pseudomonas sp.)L-1菌株γ-丁基甜菜碱羟化酶基因bbh 的克隆、表达及酶学性质

【目的】γ-丁基甜菜碱羟化酶是生物体内合成L-肉碱的关键酶。从假单胞菌(Pseudomonas sp.)L-1中克隆γ-丁基甜菜碱羟化酶基因,实现其在大肠杆菌(Escherichia coli)中的高效表达,并对表达产物进行酶学性质分析,为生物转化生产L-肉碱奠定基础。【方法】通过PCR克隆γ-丁基甜菜碱羟化酶基因,并将其开放阅读框(ORF)克隆至融合表达载体pET-15b;表达产物经His.Bind Resin纯化后对BBH进行酶学性质及三维空间结构分析;并以静止细胞进行L-肉碱的转化。【结果】成功地克隆了一个γ-丁基甜菜碱羟化酶基因bbh(GenBank:JQ250036),并实现了其在E.coli中的高效表达。融合蛋白以同源二聚体的形式存在,单个亚基的分子量约46.5 kDa,最适反应温度为30℃,最适反应pH为7.5。该酶在45℃以下稳定。在pH6.0时该酶有最高的pH稳定性。以表达bbh基因的重组大肠杆菌静止细胞转化L-肉碱,L-肉碱产量可达12.7mmol/L。【结论】Pseudomonas sp.L-1γ-丁基甜菜碱羟化酶与现有报道的bbh基因有较大的差异。由该基因表达的γ-丁基甜菜碱羟化酶能有效地转化γ-丁基甜菜碱生成L-肉碱。本研究不仅丰富了γ-丁基甜菜碱羟化酶基因资源,而且为L-肉碱的生物转化提供了一种新的转化方案。     

鹤望兰类黄酮3′,5′-羟化酶基因SrF3′5′H的克隆及表达分析

采用RT-PCR和RACE方法从鹤望兰黄色花萼中克隆到类黄酮生物合成途径关键基因SrF3′5′H。该cDNA全长1 766 bp,具有完整的开放阅读框（ORF）,共1 509个碱基,编码503个氨基酸。氨基酸同源性分析表明,SrF3′5′H编码的氨基酸序列与已报道的其他植物的F3′5′H蛋白具有很高的同源性。系统进化树分析显示,鹤望兰SrF3′5′H与非洲紫罗兰蛋白亲缘关系较近。应用半定量PCR分析表明,SrF3′5′H在始花期转录水平达到最高,且在蓝色花瓣中表达最高,在黄色花萼中几乎没有表达。     

产自Aspergillus sp.DLCS-F18的嗜酸嗜热纤维素酶及其酶学性质

纤维素酶在饲料、造纸、纺织和纤维素乙醇生产等领域有重要用途,因而备受关注.使用稻草为唯一碳源进行纤维素降解微生物的富集,从云南大理苍山地区的土壤样品中筛选获得1株纤维素降解真菌DLCS-F18,其适宜生长温度为15-40℃、pH 2.0-13.0.通过形态学和ITS rRNA分子生物学鉴定,菌株DLCS-F18被鉴定为...     

Characterization of tryptamine 5-hydroxylase and serotonin synthesis in rice plants

Serotonin is a well-known pineal hormone that in mammals plays a key role in mood. In plants, serotonin is implicated in several physiological roles such as flowering, morphogenesis, and adaptation to environmental changes. However, its biosynthetic enzyme in plants has not been characterized. Therefore, we measured the serotonin content and enzyme activity responsible for serotonin biosynthesis in rice seedlings. Tryptamine 5-hydroxylase (T5H), which converts tryptamine into serotonin, was found as a soluble enzyme that had maximal activity in the roots. The maximal activity of T5H was closely associated with the enriched synthesis of serotonin in roots. Tetrahydropterine-dependent T5H activity was inhibited by tyramine, tryptophan, 5-OH-tryptophan, and octopamine, but remained unaltered by dopamine in vitro. The tissues of rice seedlings grown in the presence of tryptamine exhibited a dose-dependent increase in serotonin in parallel with enhanced T5H enzyme activity. However, no significant increase in serotonin was observed in rice tissues grown in the presence of tryptophan, suggesting that tryptamine is a bottleneck intermediate substrate for serotonin synthesis.     

Identification of three novel salicylate 1-hydroxylases involved in the phenanthrene degradation of Sphingobium sp. strain P2

Five sets of large and small subunits of terminal oxygenase (ahdA1[a-e] and ahdA2[a-e]) and a single gene set encoding ferredoxin (ahdA3) and ferredoxin reductase (ahdA4) were found to be scattered through 15.8- and 14-kb DNA fragments of phenanthrene-degrading Sphingobium sp. strain P2. RT-PCR analysis indicated the inducible and specific expression of ahdA3, ahdA4, and three sets of genes for terminal oxygenase (ahdA1[c-e] and ahdA2[c-e]) in this strain grown on phenanthrene. The biotransformation experiments with resting cells of Escherichia coli JM109 harboring recombinant ahd genes revealed that AhdA2cA1c, AhdA1dA2d, and AhdA1eA2e can all function as a salicylate 1-hydroxylase which converts salicylate, a metabolic intermediate of phenanthrene, to catechol in cooperation with the electron transport proteins AhdA3A4. The first two oxygenases exhibited a broad range of substrate specificities such that they also catalyzed the hydroxylation of methyl- and chloro-substituted salicylates to produce their corresponding substituted catechols.     

Characterization of halophilic alkaline phosphatase from Halomonas sp. 593, a moderately halophilic bacterium

A halophilic alkaline phosphatase was highly purified (about 510-fold with about 21% yield) from a moderate halophile, Halomonas sp. 593. The N-terminal 35 amino acid sequence of this enzyme was found to be more acidic than those previously isolated from Vibrio spp., and this enzyme was partially resistant to SDS. Several enzymatic properties demonstrated that it showed higher halophilicity than those enzymes from Vibrio spp.     

Characterization of pyrene and chrysene degradation by halophilic Hortaea sp. B15

Bioprocess and Biosystems Engineering - Polycyclic aromatics hydrocarbons (PAHs) are ubiquitous and toxic pollutants that are dangerous to humans and living organism in aquatic environment....     

盐地碱蓬内生中度嗜盐菌

植物内生菌已经成为我国微生物领域研究的热点之一[1],对植物内生细菌的研究不仅丰富了内生菌的生理类群及数量,而且探索了内生菌与植物的相互关系;同时也发现了一些新分类地位的菌株。目前,关于植物内生极端微生物的研究较少,本刊2010年第2期刊登了崔春晓、夏志洁等发表的文章"盐地碱蓬内生中度嗜盐菌的分离与系统发育多样性分析"[2],作者根据盐地碱蓬内生境高盐的特点,从中不仅     

Effect of corn plant on survival and phenanthrene degradation capacity of Pseudomonas sp. UG14LR in two soils

A study was undertaken to assess if corn (Zea mays L.) can enhance phenanthrene degradation in two soils inoculated with Pseudomonas sp. UG14Lr. Corn increased the number of UG14Lr cells in both soils, especially in the acidic soiL Phenanthrene was degraded to a greater extent in UG14Lr-inoculated or corn-planted soils than uninoculated and unplanted soils. The spiked phenanthrene was completely removed within 70 days in all the treatments in slightly alkaline soil. However, in acidic soil, complete phenanthrene removal was found only in the corn-planted treatments. The shoot and root lengths of corn grown in UG14Lr-inoculated soils were not different from those in non-inoculated soil between the treatments. The results showed that in unplanted soil, low pH adversely affected the survival and phenanthrene degradation ability of UG14Lr. Planting of corn significantly enhanced the survival of UG14Lr cells in both the bulk and rhizospheric soil, and this in turn significantly improved phenanthrene degradation in acidic soil. Re-inoculation of UG14Lr in the acidic soil increased the number of UG14Lr cells and enhanced phenanthrene degradation in unplanted soil. However, in corn-planted acidic soils, re-inoculation of UG14Lr did not further enhance the already active phenanthrene degradation occurring in both the bulk or rhizospheric soils.     

中度噬盐菌Bacillus sp.Ⅰ121的质膜蛋白质组学分析

膜蛋白是连接细胞与外界环境的重要载体,发挥着物质转运、信号传导等作用。通过对一种新分离出来的中度噬盐菌Bacillussp.Ⅰ121进行了质膜蛋白质组学分析,盐胁迫下该菌株主要靠积累脯氨酸来维持细胞渗透压。在对Bacillussp.Ⅰ121在不同盐浓度下的生长情况进行测定的基础上,我们选取了1%,5%,10%,15%（w/v）NaCl4个盐浓度进行细胞培养,并分别提取细菌的质膜,通过5%～20%的梯度凝胶SDS-PAGE电泳将疏水的膜蛋白进行分离,随后对盐胁迫响应的8条不同的蛋白条带进行了ESI-LC-MS/MS质谱分析。将所得结果在NCBI数据库中进行比对,最终成功鉴定出10种蛋白。这些蛋白涉及物质跨膜转运,膜的生物合成以及胁迫信号转导等功能。为膜蛋白在盐胁迫响应过程中的作用方面的研究开辟了新思路。     

Purification and characterization of salicylate 5-hydroxylase, a three-component monooxygenase from Ralstonia sp. strain U2

Salicylate is an important intermediate in the bacterial degradation of polycyclic aromatic hydrocarbons and salicylate hydroxylases play essential roles in linking the peripheral and ring-cleavage catabolic pathways. Unlike the well-characterized salicylate 1-hydroxylases, the rarely occurred salicylate 5-hydroxylase (S5H) has not been characterized in detail. In this study, the three-component Fe-S protein complex (NagAaGHAb) of S5H from Ralstonia sp. strain U2 was purified, and its biochemical and catalytic properties were characterized. The oxygenase component NagGH exhibited an α₃β₃ heterohexameric structure and contained one Rieske-type [2Fe-2S] cluster and one mononuclear iron per α subunit. NagAa is the ferredoxin-NADP⁺ reductase component containing flavin and plant type [2Fe–2S] cluster. The ferredoxin component NagAb was characterized as a [2Fe-2S] dimer which remains remarkably stable in denaturing gel electrophoresis after being heated at 100 °C for 1 h. Purified NagAa and NagAb, NagGH catalyzed the hydroxylation of salicylate to gentisate with a specific activity of 107.12?±?14.38 U/g and showed an apparent K _m for salicylate of 102.79?±?27.20 μM and a similar K _m value for both NADH and NADPH (59.76?±?7.81 μM versus 56.41?±?12.76 μM). The hydroxylase exhibited different affinities for two hydroxysalicylates (2,4-dihydroxybenzoate K _m of 93.54?±?18.50 μM versus 2,6-dihydroxybenzoate K _m of 939.80?±?199.46 μM). Interestingly, this S5H also showed catalytic activity to the pollutant 2-nitrophenol and exhibited steady-state kinetic data of the same order of magnitude as those for salicylate. This study will allow further comparative studies of structure–function relationships of the ring hydroxylating mono- and di-oxygenase systems.