Development of native forest species of the Atlantic forest in soil contaminated with hormonal herbicides

Abstract

Hormonal herbicides, used in pastures, can suffer drift and reach forests. The sensitivity and potential phytoremediation of native species to herbicide residues should be evaluated. The objective of this study is to evaluate the initial development of native Atlantic Forest tree species in soil contaminated with hormonal herbicides. The experiment was conducted in a greenhouse in a 4 x 8 factorial scheme. The first factor had the control and the herbicide Tordon^® in three doses (0.166, 0.333 and 0.666?L ha^?1) and the second consisted of the forest species Anadenanthera colubrina (Vell.), Cassia ferruginea (Schrad.) Schrad. ex DC., Dalbergia villosa (Benth.) Benth., Machaerium nyctitans (Vell.) Benth., Machaerium opacum Vogel, Piptadenia gonoacantha (Mart.) JF Macbr., Senegalia polyphylla (DC.) Britton and Rose, Senna macranthera (DC Collad.) HS Irwin and Barnaby. The emergence, height, survival, emergence speed index, intoxication, root volume, stem diameter, root and shoot dry mass, leaf area and leaf numbers of the forest species were evaluated. The A. colubrina, D. villosa and M. opacum initial development was reduced by the herbicides 2.4-D plus picloram residues. S. macranthera and P. gonoacantha are tolerant to this mixture and, therefore, show potential for phytoremediation of degraded areas containing residues of these compounds.     

Chirality in the Absence of Rigid Stereogenic Elements: Steric and Electronic Effects on the Configurational Stability of C3 Symmetric Residual Tris‐Aryl Phosphanes

Residual stereoisomers result whenever closed subsets of appropriately substituted interconverting isomers (the residual stereoisomers) are generated from a full set of stereoisomers under the operation of a favored stereomerization mechanism. In the case of the three‐bladed propellers, differentiation of the edges of the blades and strict correlation in the motion of the rings are the prerequisites for the existence of residual stereoisomers. In these systems, the two‐ring flip mechanism is the lowest energy process. It does not interconvert all possible conformational stereoisomers generated by helicity and the three‐blade‐hub rotors. In the case of C₃ symmetric systems, two noninterconverting subgroups (the residual stereoisomers) are generated, each one constituted of quickly interconverting diastereoisomers. A series of tris‐aryl phosphanes, structurally designed for existing as residual enantiomers or diastereoisomers, bearing substituents differing in size and electronic properties on the aryl rings, were synthesized and characterized. The configurational stability of residual phosphanes, evaluated by dynamic ¹H‐ and ³¹P‐NMR analysis and by dynamic enantioselective high‐performance liquid chromatography (HPLC), was found 10 kcal mol^‐1 lower than that shown by the corresponding phosphane‐oxides. In accordance with the calculations, an unexpectedly low barrier for phosphorus pyramidal inversion was invoked as responsible for the scarce configurational stability of the residual tris‐arylphosphanes. Chirality 26:601–606, 2014. © 2014 Wiley Periodicals, Inc.     

Long-term and residual melanotropin-stimulated tyrosinase activity in S91 melanoma cells is density dependent

Summary Cell density is a factor that affects the capacity of Cloudman S91 melanoma cells to respond to melanotropins in monolayer culture. Continuous exposure of melanoma cells to α-melanotropin or its potent analog [Nle⁴,D-Phe⁷]-α-MSH, resulted in maximal stimulation of tyrosinase after 2 d of treatment, but the magnitude of stimulation decreased thereafter despite the continued presence of the melanotropins. However, when melanoma cells continually exposed to melanotropins were subcultured to an initial low cell density and maintained in contact with α-MSH or [Nle⁴,D-Phe⁷]-α-MSH (long-term culture), tyrosinase activity was rapidly restored and greatly enhanced. Also, when cells were seeded at initial densities ranging from 0.2 to 3.2×10⁶ cells/flask, and exposed for 24 h to 10⁻⁷ M α-MSH, only the cultures seeded at low densities (0.2 and 0.4×10⁶ cells/flask) exhibited maximal tyrosinase activity during the 24 h exposure to the melanotropins. Therefore, tyrosinase activity was primarily affected by cell density rather than by the duration of time the cells were in culture or by continuous exposure to melanotropin. Other flasks of various cell densities were treated with 10⁻⁷ M α-MSH or [Nle⁴,D-Phe⁷]-α-MSH for 24 h, followed byremoval of the melanotropins from the culture medium. The magnitude and duration of theresidual stimulation of melanoma tyrosinase activity by melanotropins were also found to be dependent on the initial cell density. These results reveal that there is a limited range of optimal cell densities at which melanoma cells can respond to melanotropins and express increased tyrosinase activity.     

Moss δ13C: an accurate proxy for past water environments in polar regions

Increased aridity is of global concern. Polar regions provide an opportunity to monitor changes in bioavailable water free of local anthropogenic influences. However, sophisticated proxy measures are needed. We explored the possibility of using stable carbon isotopes in segments of moss as a fine‐scale proxy for past bioavailable water. Variation in δ¹³C with water availability was measured in three species across three peninsulas in the Windmill Islands, East Antarctica and verified using controlled chamber experiments. The δ¹³C from Antarctic mosses accurately recorded long‐term variations in water availability in the field, regardless of location, but significant disparities in δ¹³C between species indicated some make more sensitive proxies. δ¹³C_SUGAR derived from living tissues can change significantly within the span of an Antarctic season (5 weeks) in chambers, but under field conditions, slow growth means that this technique likely represents multiple seasons. δ¹³C_CELLULOSE provides a precise and direct proxy for bioavailable water, allowing reconstructions for coastal Antarctica and potentially other cold regions over past centuries.     

Effects of nutrient enrichment and leaf quality on the breakdown of leaves in a hardwater stream

1. The breakdown of leaf litter in streams is influenced strongly by leaf quality and the concentration of dissolved nutrients, primarily inorganic nitrogen (N) and phosphorus (P) in the water. We examined the effect of nutrient enrichment on the breakdown of three species of leaves in a hardwater, nutrient‐rich stream. The rate of microbial respiration was also measured on the decomposing leaves. 2. The breakdown rates of dogwood (Cornus stolonifera), aspen (Populus tremuloides) and birch (Betula occidentalis), k‐values of 0.0461, 0.0307 and 0.0186 day^–1, respectively, were unaffected by nutrient enrichment and generally faster than reported previously. Microbial respiration on the leaves was greater than reported previously for leaves of congeneric species. It appears that leaf breakdown in the study stream was not nutrient limited. 3. Nitrogen‐based measures of leaf quality, such as percentage N and carbon (C)/nitrogen ratio, did not correspond to measured breakdown rates among the three leaf types. The best predictors of relative breakdown rates were percentage lignin and the percentage of the total carbon that occurred as lignin. We suggest that, when leaf breakdown is not nutrient limited, measures of carbon quality (i.e. lignin‐based measures) are a better assessment of overall leaf quality than are N‐based measures. 4. Previous studies have indicated that the enzymes produced by aquatic hyphomycetes (microfungi) operate most efficiently at a basic pH and in the presence of calcium ions. The hardwater conditions (pH=8.6, total hardness > 300 mg CaCO₃ L^–1) and abundance of dissolved NO₃ and soluble reactive phosphorous (SRP) (approximately 50 μg L^–1, each) in the study stream appear to have provided conditions that resulted in a high respiration rate and rapid breakdown of leaf litter.     

Direct measurement of stomatal cell production in barley

Summary A simple method which measures stomatal cell production directly in the first leaf of barley is described. The method was tested with three barley genotypes, two of which, cer-g ¹¹ and cer-g ¹⁰²⁶, are mutants with an abnormal stomatal pattern. Cer-g ¹¹ had a slower rate of stomatal cell formation, as compared with the other two genotypes.     

Towards a gene expression biomarker set for human biological age

We have previously described a statistical model capable of distinguishing young (age <65 years) from old (age ≥75 years) individuals. Here we studied the performance of a modified model in three populations and determined whether individuals predicted to be biologically younger than their chronological age had biochemical and functional measures consistent with a younger biological age. Those with ‘younger’ gene expression patterns demonstrated higher muscle strength and serum albumin, and lower interleukin‐6 and blood urea concentrations relative to ‘biologically older’ individuals (odds ratios 2.09, 1.64, 0.74, 0.74; P = 2.4 × 10^?2, 3.5 × 10^?4, 1.8 × 10^?2, 1.5 × 10^?2, respectively). We conclude that our expression signature of age is robust across three populations and may have utility for estimation of biological age.     

A set of HNCO-based experiments for measurement of residual dipolar couplings in 15N, 13C, (2H)-labeled proteins

Several HNCO-based three-dimensional experiments are described for the measurement of ¹³C(i–1)-¹³C(i–1), ¹⁵N(i)-¹³C(i–1), ¹⁵N(i)-¹³C(i), ¹⁵N(i)-¹³C(i–1), ¹H^N(i)-¹³C(i), ¹H^N(i)-¹³C(i–1), and ¹³C(i–1)-¹³C(i–1) scalar and dipolar couplings in ¹⁵N, ¹³C, (²H)-labelled protein samples. These pulse sequences produce spin-state edited spectra superficially resembling an HNCO correlation spectrum, allowing accurate and simple measurement of couplings without introducing additional spectral crowding. Scalar and dipolar couplings are measured with good sensitivity from relatively large proteins, as demonstrated with three proteins: cardiac Troponin C, calerythrin and ubiquitin. Measurement of several dipolar couplings between spin-1/2 nuclei using spin-state selective 3D HNCO spectra provides a wealth of structural information.     

Insecticidal activity of Citrus aurantium peel extract against Bactrocera oleae and Ceratitis capitata adults (Diptera: Tephritidae)

Citrus aurantium (L.) peel extracts in petroleum ether were evaluated for toxicity against olive fruit fly, Bactrocera oleae (Gmelin) and medfly, Ceratitis capitata (Wiedemann) adults. Bactrocera oleae flies were more susceptible to the extract than C. capitata in contact and residual bioassays. Fumigation bioassay had no effect. Both sexes of B. oleae were equally susceptible in both types of bioassays. However, males of C. capitata were more susceptible than the conspecific females. LD₅₀ values (concentration causing 50% mortality) after 96 h for the males and females of B. oleae were 44.8 and 40.1 μg/insect in contact bioassay through topical application. Whereas, LD₅₀ values for the males and females of C. capitata were 38.8 and 67.8 μg/insect respectively. LC₅₀ values after 96 h for the males and females of B. oleae were 18.8 and 17.8 μg/cm² in Petri dish residual bioassay. Whereas, LC₅₀ values for the males and females of C. capitata were 70.6 and 147.1 μg/cm² respectively.
Fractionation of the extract on a silica gel column with three different polarity solvents resulted in three fractions with only the intermediate polarity solvent fraction having substantial insecticidal activity. Toxicity of the mixtures of active and inactive fractions was equal to the original extract. Our results indicate that C. aurantium has potential for controlling insect pests.     

A coefficient of determination (R2) for generalized linear mixed models

Extensions of linear models are very commonly used in the analysis of biological data. Whereas goodness of fit measures such as the coefficient of determination (R²) or the adjusted R² are well established for linear models, it is not obvious how such measures should be defined for generalized linear and mixed models. There are by now several proposals but no consensus has yet emerged as to the best unified approach in these settings. In particular, it is an open question how to best account for heteroscedasticity and for covariance among observations present in residual error or induced by random effects. This paper proposes a new approach that addresses this issue and is universally applicable for arbitrary variance‐covariance structures including spatial models and repeated measures. It is exemplified using three biological examples.     

Detailed analysis of paternal knockout Grb10 mice suggests effects on stability of social behavior,rather than social dominance

Imprinted genes are highly expressed in monoaminergic regions of the midbrain and their functions in this area are thought to have an impact on mammalian social behaviors. One such imprinted gene is Grb10, of which the paternal allele is generally recognized as mediating social dominance behavior. However, there has been no detailed study of social dominance in Grb10 ^+/p mice. Moreover, the original study examined tube‐test behavior in isolated mice 10 months of age. Isolation testing favors more territorial and aggressive behaviors, and does not address social dominance strategies employed in group housing contexts. Furthermore, isolation stress impacts midbrain function and dominance related behavior, often through alterations in monoaminergic signaling. Thus, we undertook a systematic study of Grb10 ^+/p social rank and dominance behavior within the cage group, using a number of convergent behavioral tests. We examined both male and female mice to account for sex differences and tested cohorts aged 2, 6 and 10 months to examine any developments related to age. We found group‐housed Grb10 ^+/p mice do not show evidence of enhanced social dominance, but cages containing Grb10 ^+/p and wild‐type mice lacked the normal correlation between three different measures of social rank. Moreover, a separate study indicated isolation stress induced inconsistent changes in tube test behavior. Taken together, these data suggest future research on Grb10 ^+/p mice should focus on the stability of social behaviors, rather than dominance per se.     

Corynebacterium glutamicum,a natural overproducer of succinic acid?

Corynebacterium glutamicum is well known as an important industrial amino acid producer. For a few years, its ability to produce organic acids, under micro‐aerobic or anaerobic conditions was demonstrated. This study is focused on the identification of the culture parameters influencing the organic acids production and, in particular, the succinate production, by this bacterium. Corynebacterium glutamicum 2262, used throughout this study, was a wild‐type strain, which was not genetically designed for the production of succinate. The oxygenation level and the residual glucose concentration appeared as two critical parameters for the organic acids production. The maximal succinate concentration (4.9 g L^?1) corresponded to the lower k_La value of 5 h^?1. Above 5 h^?1, a transient accumulation of the succinate was observed. Interestingly, the stop in the succinate production was concomitant with a lower threshold glucose concentration of 9 g L^?1. Taking into account this threshold, a fed‐batch culture was performed to optimize the succinate production with C. glutamicum 2262. The results showed that this wild‐type strain was able to produce 93.6 g L^?1 of succinate, which is one of the highest concentration reported in the literature.     

Stabilized Co3+/Co4+ Redox Pair in In Situ Produced CoSe2−x‐Derived Cobalt Oxides for Alkaline Zn Batteries with 10 000‐Cycle Lifespan and 1.9‐V Voltage Plateau

In aqueous alkaline Zn batteries (AZBs), the Co³⁺/Co⁴⁺ redox pair offers a higher voltage plateau than its Co²⁺/Co³⁺ counterpart. However, related studies are scarce, due to two challenges: the Co³⁺/Co⁴⁺ redox pair is more difficult to activate than Co²⁺/Co³⁺; once activated, the Co³⁺/Co⁴⁺ redox pair is unstable, owing to the rapid reduction of surplus Co³⁺ to Co²⁺. Herein, CoSe_2?x is employed as a cathode material in AZBs. Electrochemical analysis recognizes the principal contributions of the Co³⁺/Co⁴⁺ redox pair to the capacity and voltage plateau. Mechanistic studies reveal that CoSe_2?x initially undergoes a phase transformation to derived Co_xO_ySe_z, which has not been observed in other Zn//cobalt oxide batteries. The Se doping effect is conducive to sustaining abundant and stable Co³⁺ species in Co_xO_ySe_z. As a result, the battery achieves a 10 000‐cycle ultralong lifespan with 0.02% cycle^?1 capacity decay, a 1.9‐V voltage plateau, and an immense areal specific capacity compared to its low‐valence oxide counterparts. When used in a quasi‐solid‐state electrolyte, as‐assembled AZB delivers 4200 cycles and excellent tailorability, a promising result for wearable applications. The presented effective strategy for obtaining long‐cyclability cathodes via a phase transformation‐induced heteroatom doping effect may promote high‐valence metal species mediation toward highly stable electrodes.     

Solution structure determination of the two DNA-binding domains in the Schizosaccharomyces pombe Abp1 protein by a combination of dipolar coupling and diffusion anisotropy restraints

We have solved the solution structure of the N-terminal region of the fission yeast centromere protein, Abp1, bound to a 21-base pair DNA fragment bearing its recognition site (Mw = 30 kDa). Although the two DNA-binding domains in the Abp1 protein were defined well by a conventional NOE-based NMR methodology, the overall structure of the Abp1 protein was poorly defined, due to the lack of interdomain distance restraints. Therefore, we additionally used residual dipolar couplings measured in a weakly aligned state, and rotational diffusion anisotropies. Neither the NH residual dipolar couplings nor the backbone ¹⁵N T ₁/T ₂ data were sufficient to determine the overall structure of the Abp1 protein, due to spectral overlap. We used a combination of these two orientational restraints (residual dipolar coupling and rotational diffusion anisotropy), which significantly improved the convergence of the overall structures. The range of the observed T ₁/T ₂ ratios was wider (20–50 for the secondary structure regions of Abp1) than the previously reported data for several globular proteins, indicating that the overall shape of the Abp1DNA complex is ellipsoid. This extended form would facilitate the recognition of the two separate sites in the relatively long DNA sequence by the DNA-binding domains of Apb1.     

Escape performance in three teleosts from West Greenland

Escape performance was examined in three similarly sized teleosts caught in Arctic waters: the Atlantic cod, Gadus morhua, the Greenland cod, Gadus ogac, and the short-horned sculpin, Myoxocephalus scorpius. Escape responses were elicited by a mechanical stimulus and followed by recordings of velocity and acceleration over the first 320 ms. A significant difference in escape performance was confirmed between the three species. G. morhua always exhibited the fastest and M. scorpius the slowest responses. Maximal measures of acceleration and velocity revealed no difference between G. morhua (12.6 m s^–2 and 1.27 m s^–1) and G. ogac (11.9 m s^–2 and 1.16 m s^–1) but an overall reduced performance in M. scorpius (6.5 m s^–2 and 0.71 m s^–1). The escape performance of the gadid and cottid species generally correlate well with their behavioural lifestyle, but it is surprisingly similar to Antarctic notothenioid fishes at lower temperatures.     

Microflora in the crop of adult Dusky-billed Parrotlets (Forpus modestus)

We isolated aerobic and anaerobic facultative bacteria inhabiting the crop of adult Dusky-billed Parrotlets (Forpus modestus). We looked for bacteria capable of hydrolyzing starch, the most abundant polysaccharide in seeds. We compared our results with bacteria isolated from the crop of three species of doves with granivorous–frugivorous diet and three carnivore birds. Forpus modestus has 10⁷–10⁸ of colony formation units (CFU); these values were higher by one to three orders of magnitude compared with those observed in the other species studied. Bacillus pumilus, one of the most abundant bacteria isolated in F. modestus (6.03 × 10⁶ CFU), was capable of hydrolyzing starch. We found higher diversity and abundance of bacteria in granivorous than in carnivorous birds or birds without a developed crop. Additionally, we found yeasts in the three species of doves. These findings suggest microbial activity in the crop, although its importance in food digestion needs to be determined.     

The auto-orientation in high magnetic fields of oxidized cytochrome b562 as source of constraints for solution structure determination

¹⁵N-¹H ¹J couplings were measured at 500 MHz and 800 MHz for ¹⁵N enriched oxidized cytochrome b ₅₆₂ from E. coli. The magnetic field dependence of 70 ¹J values, which could be measured without signal overlap, shows that there is a molecular magnetic anisotropy which provides partial molecular orientation in the magnetic field and, consequently, residual dipolar couplings (rdc). The rdc were used as further constraints to improve the existing structure [Arnesano et al. (1999) Biochemistry, 38, 8657–8670] with a protocol which uses the rhombic anisotropy [Banci et al. (1998) J. Am. Chem. Soc., 120, 12903–12909]. The overall large molecular magnetic anisotropy has been found to be determined by both the low spin iron (III) and the four helix bundle structure magnetic susceptibility anisotropy contributions.     

Social Indices of Breeding Productivity in Parkland Mallards

Abstract Social indices were developed to assess breeding productivity of waterfowl based on weekly roadside surveys of social groupings (i.e., pairs, lone M, flocked M). We calculated social indices for mallard (Anas platyrhynchos) populations breeding on 16 study sites in the Canadian parklands from 1993 to 1998 using 7 previously developed indices. We also calculated duckling:pair ratios from our roadside counts, and we obtained independent measures of nesting effort, nesting success, female success, and fledging rate for these same 16 sites from a concurrent telemetry study. Social indices were correlated (r² = 0.28-0.67) with telemetry-based measures of breeding productivity in 5 of 7 cases, with the strongest relationships deriving from indices that emphasized renesting effort. The 2 ineffective social indices (r² ≤ 0.13) both measured early onset of nesting activity. Duckling:pair ratios could be calculated more easily from the same survey data and also were correlated (r² = 0.26-0.48) with measures of breeding productivity. Because surveys measuring late-nesting effort also can enumerate early hatched ducklings, we recommend that waterfowl researchers use duckling:pair ratios rather than social indices because ducking:pair ratios are more easily interpretable. Development of sightability-adjustment factors for pair and duckling surveys could further enhance the utility of duckling:pair ratios as indices of breeding productivity in mallards.     

APPLIED ISSUES: Exploring the response of functional indicators of stream health to land‐use gradients

1. Broad‐scale assessment of stream health is often based on correlative relationships between catchment land‐use categories and measurements of stream biota or water chemistry. Few studies have attempted to characterise the response curves that describe how measures of ecosystem function change along gradients of catchment land use, or explored how these responses vary at broad spatial scales. 2. In autumn 2008, we conducted a survey of 84 streams in three bioregions of New Zealand to assess the sensitivity of functional indicators to three land‐use gradients: percentage of native vegetation cover, percentage of impervious cover (IC) and predicted nitrogen (N) concentration. We examined these relationships using general linear models and boosted regression trees to explore monotonic, non‐monotonic and potential threshold components of the response curves. 3. When viewing the responses to individual land‐use gradients, four of five functional indicators were positively correlated with the removal of native vegetation cover and N. In general, weaker and less responsive models were observed for the IC gradient. An analysis of the response to multiple stressors showed δ¹⁵N of primary consumers and gross primary productivity (GPP) to be the most responsive functional indicators to land‐use gradients. The multivariate models identified thresholds for change in the relationship between the functional indicators and all three land‐use gradients. Apparent thresholds were <10%IC, between 40 and 80% loss of native vegetation cover and at 0.5 and 3.2 mg L^?1 N. 4. The strength of regression models and the nature of the response curves suggest that measures of ecosystem function exhibit predictable relationships with land use. Furthermore, the responses of functional indicators varied little among three bioregions. This information provides a strong argument for the inclusion of functional indicators in a holistic assessment of stream health.     

Effects of brain‐derived neurotrophic factor on dopaminergic function and motor behavior during aging

Brain‐derived neurotrophic factor (BDNF) is critical in synaptic plasticity and in the survival and function of midbrain dopamine neurons. In this study, we assessed the effects of a partial genetic deletion of BDNF on motor function and dopamine (DA) neurotransmitter measures by comparing Bdnf^+/? with wildtype mice (WT) at different ages. Bdnf^+/? and WT mice had similar body weights until 12 months of age; however, at 21 months, Bdnf^+/? mice were significantly heavier than WT mice. Horizontal and vertical motor activity was reduced for Bdnf^+/? compared to WT mice, but was not influenced by age. Performance on an accelerating rotarod declined with age for both genotypes and was exacerbated for Bdnf^+/? mice. Body weight did not correlate with any of the three behavioral measures studied. Dopamine neurotransmitter markers indicated no genotypic difference in striatal tyrosine hydroxylase, DA transporter (DAT) or vesicular monoamine transporter 2 (VMAT2) immunoreactivity at any age. However, DA transport via DAT (starting at 12 months) and VMAT2 (starting at 3 months) as well as KCl‐stimulated DA release were reduced in Bdnf^+/? mice and declined with age suggesting an increasingly important role for BDNF in the release and uptake of DA with the aging process. These findings suggest that a BDNF expression deficit becomes more critical to dopaminergic dynamics and related behavioral activities with increasing age.