RHODELLA RETICULATA SP. NOV., A NEW COCCOID RHODOPHYTAN ALGA (PORPHYRIDIALES)1,2

A new coccoid rhodophytan species is described and compared with other species in the genus Rhodella. Thylakoids in the pyrenoid characterize the new species and indicate a closer relationships of Rhodella to Porphyridium than was previously indicated.     

ULTRASTRUCTURE OF VEGETATIVE ORGANIZATION AND CELL DIVISION IN THE UNICELLULAR RED ALGA DIXONIELLA GRISEA GEN. NOV. (RHODOPHYTA) AND A CONSIDERATION OF THE GENUS RHODELLA1

This study suggests that the genus Rhodella be restricted to that set of features currently observed only in Rhodella maculata Evans and Rhodella violacea (Korn-mann) Wehrmeyer, that a new genus Dixoniella be established to accommodate the unicellular red alga, Rhodella grisea (Geitler) Fresnel, Billard, Hindák et Pekár-ková, and that Rhodella cyanea Billard et Fresnel be further studied for probable reclassification. These conclusions are based on ultrastructural comparisons of Dixoniella grisea with published information on the genus Rhodella. The presence of thylakoids in the pyrenoid, a peripheral encircling thylakoid in the chloroplast, a dictyosome/nuclear envelope association, and the lack of a specialized pyrenoid/nucleus association in D. grisea separate this alga from the genus Rhodella. Cell division in D. grisea is not demonstrably different from that in Rhodella, although the unusually well-defined material of the presumptive microtubule organizing center (MTOC) made it possible to follow the development and behavior of the MTOC to a greater degree than in previously studied red algal cells. The surprising amount of conformity in cell division characters between D. grisea and the genus Rhodella prompted a comparison of cell division characteristics in all red algal unicells studied to date. All unicells show a remarkable degree of similarity except for differences in interzonal spindle length, dissimilarities in size of the nucleus-associated organelle (NAO), and the unusual NAO of Porphyridium purpureum (Bory) Drew et Ross.     

ULTRASTRUCTURE OF VEGETATIVE AND DIVIDING CELLS OF THE UNICELLULAR RED ALGAE RHODELLA VIOLACEA AND RHODELLA MACULATA1

Rhodella violacea (Kornmann) Wehrmeyer and Rhodella maculata Evans were investigated for ultrastructural details of vegetative and dividing cells. Rhodella violacea has a nuclear projection into the pyrenoid similar to that found in R. maculata, although the nuclear projection in R. maculata traverses a starch-lined area before contacting the pyrenoid. Unlike most, red algae, the two Rhodella species lack a peripheral encircling thylakoid in the chloroplast and have dictyosomes associated solely with endoplasmic reticulum (ER) instead of with both mitochondria and ER. Both species also have a well-developed peripheral system of ER connected to the plasmalemma by tubules, a situation found only in red algal unicells, Cell division was studied primarily in R. violacea; a less thorough examination of R. maculata showed no essential differences. Both have small, double-ringed, nucleus-associated organ files (NAOs) surrounded by moderately electron-dense material, metaphase–anaphase polar gaps in the nuclear envelope, absence of perinuclear ER. and short interzonal spindles. This pattern of mitosis is similar in most respects to that reported in the unicell Flintiella. Following mitosis, microtubules extend from the region of each NAO to its associated nucleus and to the undivided pyrenoid. The NAOs appear to apply tension to the nuclei and the pyrenoid and may be the mechanism for ensuring equal partitioning of both organdies. Two different forms of pyrenoid-nucleus association occur during mitosis. Nuclear projections into the pyrenoid, prevalent during interphase and early stages of mitosis, recede at metaphase. Then, the pyrenoid extends protrusions into the nuclear polar areas, forming a cup that partially surrounds the nucleus. Cell division and vegetative characters confirm the close taxonomic affinity of these two species of Rhodella and support their separation from the genus Porphyridium.     

Multilocus sequence analysis of homologous recombination and diversity in Arthrobacter sensu lato named species and glacier-inhabiting strains

Members of the bacterial genus Arthrobacter sensu lato are Gram-positive actinomycetes distributed worldwide and found in numerous environments including soil, water, glacier ice, and sewage. Homologous recombination is an important driving force in bacterial evolution, but its impact on Arthrobacter sensu lato evolution is poorly understood. We evaluated homologous recombination among 41 Arthrobacter sensu lato named species, using multilocus sequence analysis (MLSA). A high level of recombination was found, associated with strong diversification and a reticulate evolutionary pattern of Arthrobacter sensu lato. We also collected a total of 31 cold-adapted Arthrobacter sensu lato strains from two cold glaciers located in northwest China and two temperate glaciers in southwest China, and evaluated their diversity and population structure by MLSA. The glacier strains displayed high diversity, but rates of recombination among the four glacier groups were quite low, indicating that barriers to homologous recombination formed in the past among the populations on different glaciers. Our findings indicate that historical glaciation events shaped the contemporary distributions, taxonomic relationships, and phylogeographic patterns of Arthrobacter sensu lato species on glaciers.     

Molecular Evidence for Multiple Origins of the European Spined Loaches (Teleostei,Cobitidae)

We present a phylogenetic investigation of the Northern Clade, the major monophyletic clade within the freshwater fish family Cobitidae, one of the most prominent families of freshwater fishes found in Asian and European waters. Phylogenetic reconstructions based on the cytochrome b and RAG-1 genes show the genera Microcobitis, Sabanejewia, Koreocobitis and Kichulchoia as monophyletic groups. These reconstructions also show a Cobitis sensu lato and a Misgurnus sensu lato group. The Cobitis sensu lato group includes all species of Cobitis, Iksookimia, Niwaella and Kichulchoia, while the Misgurnus sensu lato group includes Misgurnus, Paramisgurnus and Koreocobitis. Although the monophyly of both the Cobitis sensu lato and Misgurnus sensu lato groups is supported, relationships within the groups are incongruent with current generic definitions. The absence of monophyly of most genera included in the Cobitis sensu lato group (Cobitis, Iksookimia and Niwaella) or their low genetic differentiation (Kichuchoia) supports their consideration as synonyms of Cobitis. Molecular phylogenies indicate that the Asian species of Misgurnus experienced a mitochondrial introgression from a lineage of Cobitis. We also find two nuclear haplotypes in the same Cobitis species from the Adriatic area that, in the absence of morphological differentiation, may indicate molecular introgression. Most lineages within the Northern Clade consist of species found in East Asia. However, some lineages also contain species from Europe and Asia Minor. The phylogenetic relationships presented here are consistent with previous studies suggesting an East Asian origin of the Northern Clade. According to the current distributions and phylogenetic relationships of the Misgurnus sensu lato and Cobitis clade lineages, particularly of M. fossilis and C. melanoleuca, the range expansion of East Asian species into Europe was most likely via Siberia into Northern and Central Europe. Phylogenetic analyses also show that the Cobitis sensu lato group consists of two clear subgroups (I and II), each presenting geographical differences. Subgroup I is distributed exclusively in East Asian drainages with an Eastern European offshoot (C. melanoleuca), whereas Subgroup II includes species widespread throughout Europe (including the Mediterranean), Asia Minor, the Black Sea and the Caucasus, with some lineages related to species restricted to East Asia.     

New observations onPorphyridium griseum Geitler =Rhodella grisea (Geitler) comb. nova (Porphyridiales,Rhodophyceae)

The rare unicellular rhodophytePorphyridium griseum has been collected and isolated from basins, fed with thermal water, in Piestany, Czechoslovakia. This is the first report ofP. griseum sinceGeitler's find in the Neusiedler See, Austria. Ultrastructural investigations of the new strain demonstrate thatP. griseum belongs to the closely related genusRhodella. Comparison with current species ofRhodella and pigment analyses show thatP. griseum is identical to the marineR. reticulata and a new combination,Rhodella grisea (Geitler) comb. nov., is proposed to include both organisms.Dedicated to Prof. DrLothar Geitler on the occasion of his 90th birthday.     

Taxonomic status of cestodes of the genus Paracaryophyllaeus Kulakowskaja, 1961 (Caryophyllidea: Caryophyllaeidae)

A taxonomic revision of cestodes of the genus Paracaryophyllaeus Kulakowskaja, 1961, parasites of cobitid fishes, has been performed. Three species (Paracaryophyllaeus gotoi (Motomura, 1927), P. kulakowskae sp. n., and P. misgurni sp. n.) are considered valid species; two are described as new species. P. dubininorum Kulakowskaja, 1961 is a young synonym of P. gotoi. The taxonomic status for P. gotoi sensu Scholz, 1989, P. gotoi sensu Scholz et al., 2001, and Paracaryophyllaeus sp. 1 and Paracaryophyllaeus sp. 2 (described in present work) needs specification.     

MORPHOLOGY AND MOLECULAR PHYLOGENY OF ANKISTRODINIUM GEN. NOV. (DINOPHYCEAE), A NEW GENUS OF MARINE SAND‐DWELLING DINOFLAGELLATES FORMERLY CLASSIFIED WITHIN AMPHIDINIUM1

The classical athecate dinoflagellate genera (Amphidinium, Gymnodinium, Gyrodinium) have long been recognized to be polyphyletic. Amphidinium sensu lato is the most diverse of all marine benthic dinoflagellate genera; however, following the redefinition of this genus ～100 species remain now of uncertain or unknown generic affiliation. In an effort to improve our taxonomic and phylogenetic understanding of one of these species, namely Amphidinium semilunatum, we re‐investigated organisms from several distant sites around the world using light and scanning electron microscopy and molecular phylogenetic methods. Our results enabled us to describe this species within a new heterotrophic genus, Ankistrodinium. Cells of A. semilunatum were strongly laterally flattened, rounded‐quadrangular to oval in lateral view, and possessed a small asymmetrical epicone. The sulcus was wide and characteristically deeply incised on the hypocone running around the antapex and reaching the dorsal side. The straight acrobase with hook‐shaped end started at the sulcal extension and continued onto the epicone. The molecular phylogenetic results clearly showed that A. semilunatum is a distinct taxon and is only distantly related to species within the genus Amphidinium sensu stricto. The nearest sister group to Ankistrodinium could not be reliably determined.     

New names inPhanerogamae 6

94 new nomenclatural combinations are proposed, resulting mostly from the study of taxonomic problems on the generic level. The reasons for the acceptance of the generic rank are given in the case ofAcetosa, Pulegium and of some sections ofOrobanche s. l. andSilene s. l. The taxonomic rank ofGentiana blepharophora Bordzi?. from the Caucasus has been revised and the taxon is classified as a subspecies ofGentianopsis ciliata. Nomenclatural problems of not numbered “species” inHoffmann's “Flora Deutschlands” from 1800 are demonstrated on the example ofArmeria elongata.     

New nomenclatural combinations in the North American perennial Triticeae (Gramineae)

Recent generic realignments of the perennial grasses of the tribe Triticeae necessitate some new name combinations for North American species. Three new species combinations and three new subspecies combinations are made to accommodate six long-anthered and usually cross-pollinating species ofAgropyron sensu A. S. Hitchcock in the genusElytrigia sensu N. N. Tzvelev. Three new species combinations are made to accommodate three long-anthered and usually cross-pollinating species ofElymus sensu A. S. Hitchcock in the genusLeymus sensu N. N. Tzvelev. A complete listing is given of the North American species and subspecies ofElytrigia andLeymus as I perceive them.     

An insight into molecular taxonomy of bufonids,microhylids, and dicroglossid frogs: First genetic records from Pakistan

The current study was focused on documentation of amphibian assemblage in North Punjab and Islamabad Capital Territory, Pakistan, by using mitochondrial gene sequences of 16S rRNA. Our study entailed 37% of the known amphibian species of the country. We provided a phylogenetic analysis based on 74 newly generated mitochondrial 16S rRNAs from nine species of genus Microlyla, Duttaphrynus, Allopaa, Nanorana, Sphaerotheca, Minervarya, Hoplobatrachus, and Euphlyctis. We employed the maximum‐likelihood inference and Bayesian analysis to assess the taxonomic status of the samples obtained from Pakistan, with respect to other congeneric species from surrounding regions. Our findings confirmed the taxonomic status of South Asian anuran species Duttaphrynus stomaticus, Duttaphrynus melanostictus, Microhyla nilphamariensis, Allopaa hazarensis, Nanorana vicina, Sphaerotheca maskeyi (synonym: S. pashchima), Minervarya pierrei, Hoplobatrachus tigerinus, and Euphlyctis kalasgramensis in Pakistan. We have reported new country records of genus Minervarya ( M. pierrei). Minervarya pierrei was previously misidentified as Fejervarya limnocharis, due to dearth of genetic information. We provided the first genetic records of our endemic species N. vicina. The results revealed the taxonomic placement of N. vicina with respect to its congeners and validated the taxonomic status of N. vicina from its type locality (Murree) for the first time. The findings of the present study also indicated the paraphyletic relationship of A.‐ hazarensis with Nanorana species. So, based on our phylogenetic inferences, morphological characters, and habitat preferences, validity of generic status of A. hazarensis is undecided. As our data were not enough to resolve this issue, we suggest sequencing of additional mitochondrial and nuclear genes in the future studies to get a better resolution. We recommend carrying out extensive surveys throughout the country for proper scientific documentation of amphibians of Pakistan. Many new species, some of them might be endemic to Pakistan, are expected to be discovered, and taxonomic status of other species would be resolved.     

A novel specific DNA marker in Saccharomyces bayanus for species identification of the Saccharomyces sensu stricto complex

This study was based on RAPD fingerprinting for species identification of the Saccharomyces sensu stricto complex. 40 random primers were used for RAPD analysis. The results showed that one of these primers, OPT-18, produced a 974 bp species-specific band, which was only found in the tested S. bayanus. Afterward this specific fragment was isolated from agarose gel and ligated into vector for DNA sequencing. A pair of primer SpeOPT18Sbay-F2 and SpeOPT18Sbay-R2 were designed according to the cloned species-specific sequence, which was employed for PCR with the template DNA of the S. sensu stricto strains, single 779 bp species-specific band was only found in S. bayanus. Therefore, we conclude that our novel species DNA marker could be used to rapidly and accurately identify the species of S. bayanus from S. sensu stricto complex by direct PCR.     

Odonellia,a new genus of Convolvulaceae from tropical America

A new genus of Convolvulaceae is described to accommodate two species previously included withinJacquemontia. A discussion is given of generic limits in the family, and a taxonomic treatment of the new genusOdonellia is presented.     

The genus Taxodium (Cupressaceae) in the Palaeogene and Neogene of Central Europe

Fossil remains of Taxodium from upper Eocene to lower Miocene localities in Germany, the Czech Republic and Russia are investigated to reconsider taxonomic concepts. It is demonstrated that all material belongs to one species which is named Taxodium dubium (Sternberg) Heer emend. Using the whole-plant concept, T. dubium is considered as a synthetic species comprising foliage, seed cones, seeds, and male cones with pollen in situ. Shared identity of T. dubium and the wood morpho-taxon Taxodioxylon taxodii Gothan is assumed. Taxodium dubium underwent evolutionary changes through the Oligocene expressed mainly in changes of the cone scale ornamentation. To designate this intraspecific variation taxonomically two morpho-formae are distinguished: T. dubium forma heerii (Dorofeev) Kunzmann, Kva?ek, Mai et Walther stat. nov. et emend. and T. dubium forma dubium. Simultaneous intraspecific variations in leaf morphology and leaf epidermal anatomy are missing. Taxodium dubium occurs from the late Eocene to late Miocene in the (Atlantic-) Boreal province sensu Mai of Central Europe and from the late Oligocene to late Pliocene in the Transeuropean Paratethys province sensu Mai.