Nasogastric intubation technique for bile sampling in the baboon (Papio ursinus).

A duodenal tube was introduced into the duodenum of the fasted baboon via the nasal passage. After the application of vacuum for several minutes, the baboon received an intravenous injection of pancreozymin and cholecystokinin which caused contraction of the gall bladder. Aspiration of the bile sample was carried out via the duodenal tube.     

A simple syringe sampler for sampling bottom waters

SUMMARY. A cheap messenger-operated device for sampling water immediately above sediment is described.     

A blood sampling technique for prehatched chicks

ABSTRACT Collecting blood from neonatal or prehatched chicks is sometimes necessary, requiring specialized blood collection techniques and skills. However, such sampling can be difficult and could potentially have adverse effects. I developed a method for collecting blood from chicks still in an egg. The technique involves enlarging the pipping hole, removing the chick's head to take blood from a jugular vein, and returning the chick into its original position in the egg to complete hatching back in the nest. I used this technique on Crested Tern (Thalasseus bergii) chicks (N= 13), with no apparent adverse effects to growth or short‐term survival. The amount of blood extracted (0.1–0.15 ml) was sufficient for a blood smear, hematocrit, and total white blood cell count. This method should be useful for eggs as small as 40 mm in length; eggs smaller than this would likely not be good candidates for this technique because eggshells may be too thin to safely handle. This technique may be useful for investigators studying the immunological and endocrinological transition between embryos and hatchlings.     

Low-mass molecular dynamics simulation: A simple and generic technique to enhance configurational sampling

CLN025 is one of the smallest fast-folding proteins. Until now it has not been reported that CLN025 can autonomously fold to its native conformation in a classical, all-atom, and isothermal–isobaric molecular dynamics (MD) simulation. This article reports the autonomous and repeated folding of CLN025 from a fully extended backbone conformation to its native conformation in explicit solvent in multiple 500-ns MD simulations at 277 K and 1 atm with the first folding event occurring as early as 66.1 ns. These simulations were accomplished by using AMBER forcefield derivatives with atomic masses reduced by 10-fold on Apple Mac Pros. By contrast, no folding event was observed when the simulations were repeated using the original AMBER forcefields of FF12SB and FF14SB. The results demonstrate that low-mass MD simulation is a simple and generic technique to enhance configurational sampling. This technique may propel autonomous folding of a wide range of miniature proteins in classical, all-atom, and isothermal–isobaric MD simulations performed on commodity computers—an important step forward in quantitative biology.     

Estimating biomass of submersed vegetation using a simple rake sampling technique

We evaluated the use of a simple rake sampling technique for predicting the biomass of submersed aquatic vegetation. Vegetation sampled from impounded areas of the Mississippi River using a rake sampling technique, was compared with vegetation harvested from 0.33-m² quadrats. The resulting data were used to model the relationship between rake indices and vegetation biomass (total and for individual species). We constructed linear regression models using log-transformed biomass data for sites sampled in 1999 and 2000. Data collected in 2001 were used to validate the resulting models. The coefficient of determination (R ²) for predicting total biomass was 0.82 and ranged from 0.59 (Potamogeton pectinatus) to 0.89 (Ceratophyllum demersum) for individual species. Application of the model to estimate total submersed aquatic vegetation is illustrated using data collected independent of this study. The accuracy and precision of the models tested indicate that the rake method data may be used to predict total vegetation biomass and biomass of selected species; however, the method should be tested in other regions, in other plant communities, and on other species. Handling editor: S. M. Thomaz     

A nondamaging blood sampling technique for waterfowl embryos

ABSTRACT.   Development of minimally invasive techniques to collect blood in free-living birds is desirable for both ethical and conservation reasons. We describe a new, simple technique for collecting blood samples from waterfowl eggs that involves recovering blood from a small hemorrhage after puncturing the shell of eggs showing the first signs of hatching. This technique allowed us to obtain a large number of blood samples from hatchling Greater Snow Geese ( Chen caerulescens atlantica ) and did not require the sacrifice or retention of any individuals, thus minimizing stress. High-quality blood samples for genetic studies were obtained, with no adverse effects on either embryos or the post-hatch survival of young geese.