Effects of Environmental Heterogeneity and Disturbance on the Native and Non-native Flora of Desert Springs

Vegetation often is used as a decision variable for conservation and resource management. Because time and money are limited, it is useful to identify predictable relationships between measures of vegetation diversity or status, the physical environment, and disturbance; native and non-native plants may have different functional responses. Working towards development of effective, practical strategies for management and ecological restoration in the Spring Mountains, an isolated mountain range in the eastern Mojave Desert (Nevada, USA) that is a focus of regional conservation planning, we examined whether native and non-native assemblages of spring-associated perennial plants have predictable relationships with elevation, springbrook length, and various land uses. We also tested whether elevation, springbrook length, and overall disturbance were associated with the degree of predictability of local species presence and absence. Consistent with work in other systems, species richness and cover of native plants tended to decrease as intensity of disturbance increased, whereas species richness (but not cover) of non-native plants tended to peak with intermediate disturbance. Our results may suggest that invasions of non-native plants at springs in the Spring Mountains are relatively recent, and that rapid restoration and management actions may help protect ecological processes and viability of native plants. Ability to predict the order in which individual species are likely to be extirpated from or colonize springs was limited, perhaps reflecting considerable environmental heterogeneity among springs.     

DNA barcoding reveals extraordinary cryptic diversity in an amphipod genus: implications for desert spring conservation

DNA barcoding has revealed unrecognized species in several animal groups. In this study we have employed DNA barcoding to examine Hyalella, a taxonomically difficult genus of amphipod crustaceans, from sites in the southern Great Basin of California and Nevada, USA. We assessed the extent of species diversity using a species screening threshold (SST) set at 10 times the average intrapopulation cytochrome c oxidase subunit I (COI) haplotype divergence. Despite the fact that this threshold approach is more conservative in delineating provisional species than the phylogenetic species concept, our analyses revealed extraordinary levels of cryptic diversity and endemism. The SST discriminated two provisional species within Hyalella sandra, and 33 provisional species within Hyalella azteca. COI nucleotide divergences among these provisional species ranged from 4.4% to 29.9%. These results have important implications for the conservation of life in desert springs - habitats that are threatened as a result of groundwater over-exploitation.     

Multivariate analysis of vegetational changes in permanent woodland plots with different sewage sludge treatments

Vegetation data from an experiment on the impact of sewage sludge on woodland vegetation dynamics are analysed by ordination to examine the reaction of a forest community to sludge disturbance. Two different kinds of vegetational response are discussed in relation to horizontal patchiness of vegetation. It is suggested that the species-poor component of the vegetation mosaic observed reveals quicker recovery from sludge disturbance than the species-rich component, which is characterized by a more complicated network of interspecific relations. A high correlation between plot-scores on the first ordination axis and sludge dose is found, indicating that in the altered community the main vegetational gradient reflects the intensity of disturbance. An attempt is made to interpret the main gradients of vegetational variation in terms of ecological indicator values of species. It is concluded that the modified competitive ability of species in a changed environment plays the most important role in building up a new community structure.     

Ecological structure of assemblages of coral reef fishes on isolated patch reefs

A 9-year study of the structure of assemblages of fish on 20 coral patch reefs, based on 20 non-manipulative censuses, revealed a total of 141 species from 34 families, although 40 species accounted for over 95% of sightings of fish. The average patch reef was 8.5 m² in surface area, and supported 125 fish of 20 species at a census. All reefs showed at least a two-fold variation among censuses in total numbers of fish present, and 12 showed ten-fold variations. There was also substantial variation in the composition and relative abundances of species present on each patch reef, such that censuses of a single patch reef were on average about 50% different from each other in percent similarity of species composition (Czekanowski's index). Species differed substantially in the degree to which their numbers varied from census to census, and in the degree to which their dispersion among patch reefs was modified from census to census. We characterize the 40 most common species with respect to these attributes. The variations in assemblage structure cannot be attributed to responses of fish to a changing physical structure of patch reefs, nor to the comings and goings of numerous rare species. Our results support and extend earlier reports on this study, which have stressed the lack of persistant structure for assemblages on these patch reefs. While reef fishes clearly have microhabitat preferences which are expressed at settlement, the variations in microhabitat offered by the patch reefs are insufficient to segregate many species of fish by patch reef. Instead, at the scale of single patch reefs, and, to a degree, at the larger scale of the 20 patch reefs, most of the 141 species of fish are distributed without regard to differences in habitat structure among reefs, and patterns of distribution change over time. Implications for general understanding of assemblage dynamics for fish over more extensive patches of reef habitat are considered.     

Factors influencing fish distribution in two desert reservoirs,Central Arizona

Fishes introduced into western reservoirs are intrinsically shallow-water, littoral inhabitants and remain so because of inherent limnological factors characteristic of mid-latitude lentic systems. Depth of euphotic zone and thermocline and dissolved oxygen concentrations limited the majority (90%) of fish in two desert reservoirs to the upper 10 m of water.     

Evolutionary history of Ash Meadows pupfish (genus <Emphasis Type="Italic">Cyprinodon</Emphasis>) populations inferred using microsatellite markers

Pupfish (genus Cyprinodon) persist in a series of isolated warm springs in Death Valley. Here we describe an analysis of microsatellite variation at six loci for nine populations encompassing three distinct taxa. Levels of genetic variation within populations and the pattern of relatedness among populations are best explained by spring elevation. Springs at higher elevations harbored less variation and exhibited greater among population divergence than lower elevation springs. This pattern reflects regional paleohydrological history showing a declining water table over the last 20,000 years. Continuing decline of the water table, a trend accelerated by local ground water mining, portends a future of increasing isolation and declining within-population variation.     

柴达木盆地荒漠灌丛群落谱系结构研究

谱系信息是群落生态学和保育生物学研究的主要内容之一。为探究柴达木盆地荒漠灌丛群落谱系结构及其与环境因子的关系,该研究以柴达木盆地荒漠灌丛为对象,基于群落中物种存在与否的物种组成数据,使用R语言中picante软件包计算了灌丛群落谱系多样性指数和谱系结构指数,并且分析了谱系结构指数与年均温度、年均降水以及土壤含水量之间的关系,以揭示柴达木盆地灌丛群落物种之间的亲缘关系和群落生物多样性维持机制。结果表明:(1)柴达木盆地灌丛群落谱系结构与土壤含水量之间存在极显著相关性(P=2.77×10-6),随着土壤含水量的增加,群落谱系结构聚集程度逐渐降低,表现出生境过滤作用逐步减弱,生物间相互作用逐渐加强的变化趋势。(2)群落谱系结构与年均温度、年均降水之间无显著相关性。(3)典型荒漠生境灌丛和河谷(河漫滩)生境灌丛群落的谱系结构差异显著(P0.05),整体上分别表现为谱系聚集状态和谱系发散状态;河谷(河漫滩)生境灌丛群落的谱系多样性显著高于典型荒漠生境灌丛(P0.05)。(4)将群落谱系信息应用在生物多样性保护实践中,发现河谷(河漫滩)生境灌丛群落较典型荒漠生境的灌丛群落可能具有更高的保护价值。研究认为,将群落谱系研究与保育生物学理论结合将会使生物多样性保护策略更加科学有效。     

Decadal trends in a coral community and evidence of changed disturbance regime

A 23 year data set (1981–2003 inclusive) and the spatially explicit individual-based model “Compete^©” were used to investigate the implications of changing disturbance frequency on cover and taxonomic composition of a shallow coral community at Lizard Island, Australia. Near-vertical in situ stereo-photography was used to estimate rates of coral growth, mortality, recruitment and outcomes of pair-wise competitive interactions for 17 physiognomic groups of hard and soft corals. These data were used to parameterise the model, and to quantify impacts of three acute disturbance events that caused significant coral mortality: 1982—a combination of coral bleaching and Crown-of-Thorns starfish; 1990—cyclone waves; and 1996—Crown-of-Thorns starfish. Predicted coral community trajectories were not sensitive to the outcomes of competitive interactions (probably because average coral cover was only 32% and there was strong vertical separation among established corals) or to major changes in recruitment rates. The model trajectory of coral cover matched the observed trajectory accurately until the 1996 disturbance, but only if all coral mortality was confined to the 3 years of acute disturbance. Beyond that date (1997–2003), when the observed community failed to recover, it was necessary to introduce annual chronic background mortality to obtain a good match between modelled and observed coral cover. This qualitative switch in the model may reflect actual loss of resilience in the real community. Simulated over a century, an 8 year disturbance frequency most closely reproduced the mean community composition observed in the field prior to major disturbance events. Shorter intervals between disturbances led to reduced presence of the dominant hard coral groups, and a gradual increase in the slow growing, more resilient soft corals, while longer intervals (up to 16 years) resulted in monopolization by the fastest growing table coral, Acropora hyacinthus.     

退化植物群落结构及其物种组成在人为干扰梯度上的响应

在岷江上游大沟流域,沿着人为干扰梯度,调查了退化榛栎群落的结构及其物种组成变化。结果表明：（１）除密度外,群落木本层的结构特性（密度、高度、生物量、基径面积和物种多样性）与干扰强度的增加呈负相关,而其草本物种多样性、生态优势度呈正反应,但地上生物量变化呈现相反的趋势;（２）根据群落内植物种群密度（或盖度）在干扰梯度上的响应变化,群人４７个种可基本上分成３个反应种组：１６个为扩展种（ｉｎｖａｓｉｖｅ     

Quantitative analysis of the community structure of tropical amphibian assemblages and its significance to conservation

Amphibian community structure in five tropical sites was studied using dominance, diversity, evenness indices, niche breadth and overlapping scores and association analysis. Ten species of amphibians with average density/ha varying from 8 to 49 in different sites were collected.Rana limnocharis andBufo melanostictus were respectively the dominant amphibia in paddy fields and other sites. Niche breadth scores indicatedRana limnocharis, Bufo melanostictus andRana cyanophlyctis as habitat generalists indicating wide tolerance to environmental gradients. Five frog speciesi.e. Rana tigerina, Microhyla ornata, Ramanella variegata, Uperedon systoma andPolypedates maculatus were considered habitat specialists indicating narrow tolerance to environmental gradients. Niche breadth scores were found to be a function of the cumulative relative abundance value of different species. The niches ofRana limnocharis andRana cyanophlyctis, Bufo melanostictus andBufo stomaticus showed maximum overlapping.Rana tigerina showed maximum niche overlapping withRana variegata in paddy fields and withMicrohyla ornata when all sites were taken together. The coefficient of community index was maximum between the paddy fields and minimum between the paddy fields and forest site.Rana tigerina occurred very sparsely and analysis of data indicates that its population are threatened and require conservation measure.     

黄山陈村水库上游河源溪流的鱼类群落及其纵向梯度格局

确定鱼类群落的分布格局及其对人类活动的响应,是合理保护、恢复和管理鱼类多样性的基础。基于2011年5月和10月自黄山陈村水库上游3条河源溪流共39个样点的调查数据,比较研究了溪流间鱼类群落及其纵向梯度格局的异同,着重探讨了人类活动对溪流鱼类群落纵向梯度格局的影响。研究结果显示,同人为干扰较轻的舒溪相比,人为干扰严重的浦溪和麻溪中水宽、底质和植被覆盖率等局域栖息地条件显著变化,这造成了后者的鱼类多样性显著下降及物种组成的显著变化,主要表现为敏感性的地方物种(如宽鳍鱲、光唇鱼、原缨口鳅等)数量减少、耐受性的广布物种(如泥鳅、麦穗鱼、高体鰟鲏等)数量增多。舒溪的鱼类物种数及其组成均与海拔显著相关,但这种\"海拔-鱼类群落\"关系在麻溪和浦溪中削弱甚至消失。底质、植被覆盖率对舒溪鱼类群落具有重要影响,但对浦溪和麻溪鱼类群落却无显著影响。研究结果表明,在子流域空间尺度上,诸如城镇化发展、土地利用、河道治理等人类活动可通过对局域栖息地条件的影响,导致溪流鱼类多样性下降及其物种组成的变化,破坏鱼类群落的纵向梯度格局,并改变栖息地与鱼类群落之间的联系。     

Population Substructuring in a Migratory Freshwater Fish Prochilodus argenteus (Characiformes, Prochilodontidae) from the São Francisco River

The construction of hydroelectric dams, pollution of rivers and other environmental changes are responsible for the disappearance of many natural fish stocks. The purpose of this work was to analyze the fish Prochilodus argenteus inhabiting the region of the Três Marias dam in the São Francisco River (Brazil) collected in two sites having distinct environmental characteristics. Three novel homologous and one known cross-specific microsatellites were used to assess genetic variation within and between the two collection sites (namely A and B) in order to confirm the occurrence of population substructuring previously suggested using RAPD markers. A higher number of exclusive alleles and a greater genetic variability in region B strongly reinforce the co-existence of different reproductive units in this area. F _ST estimates showed a significant population differentiation between the two sites, indicating the possible existence of distinct gene pools. Considering the economic importance of this fishery resource in the São Francisco River, these findings could provide very important information for fisheries management, aquaculture and conservation of the stocks of this species.     

Desert fishes: an interdisciplinary approach to endangered species conservation in North America

The habitat degradation and species endangerment that preceded and accompanied the North American environmental movement in the late 1960s and early 1970s found the conservation community ill-prepared. Protective legislation and basic research necessary for structuring recovery efforts did not exist. Desert aquatic communities were among the first to need attention, and an interdisciplinary effort was mounted in an early application of conservation biology. The history and evolution of desert ecosystem preservation are discussed, and case histories are presented that may prove helpful in other parts of the world as habitats are inexorably reduced. The role of the Desert Fishes Council in co-ordinating efforts of research scientists and resource managers to achieve common objectives is emphasized.