Soil bacterial communities of different natural forest types in Northeast China

Background and aims

The types of natural forests have long been suggested to shape below-ground microbial communities in forest ecosystem. However, detailed information on the impressionable bacterial groups and the potential mechanisms of these influences are still missing. The present study aims to deepen the current understanding on the soil microbial communities under four typical forest types in Northeast Asia, and to reveal the environmental factors driving the abundance, diversity and composition of soil bacterial communities.

Methods

Four forest types from Changbai Nature Reserve, representing mixed conifer-broadleaf forest and its natural secondary forest, evergreen coniferous forest, and deciduous coniferous forest were selected for this study. Namely, Broadleaf-Korean pine mixed forest (BLKP), secondary Poplar-Birch forest (PB), Spruce-Fir forest (SF), and Larch forest (LA), respectively. Soil bacterial community was analyzed using bar-coded pyrosequencing. Nonmetric multidimensional scaling (NMDS) was used to illustrate the clustering of different samples based on both Bray-Curtis distances and UniFrac distances. The relationship between environmental variables and the overall community structure was analyzed using the Mantel test.

Results

The two mixed conifer-broadleaf forests (BLKP and PB) displayed higher total soil nutrients (organic carbon, nitrogen, and phosphorus) and soil pH, but a lower C/N ratio as compared to the two coniferous forests (SF and LA). The mixed conifer-broadleaf forests had higher alpha-diversity and had distinct bacterial communities from the coniferous forests. Soil texture and pH were found as the principle factors for shaping soil bacterial diversity and community composition. The two mixed conifer-broadleaf forests were associated with higher proportion of Acidobacteria, Verrucomicrobia, Bacteroidetes, and Chloroflexi. While the SF and LA forests were dominated by Proteobacteria and Gemmatimonadetes.

Conclusions

Different natural forest type each selects for distinct microbial communities beneath them, with mixed conifer-broadleaf forests being associated with the low-activity bacterial groups, and the coniferous forests being dominated by the so-called high-activity members. The differentiation of soil bacterial communities in natural forests are presumably mediated by the differentiation in terms of soil properties, and could be partially explained by the copiotroph/oligotroph ecological classification model and non-random co-occurrence patterns.     

Leaf litter of a dominant cushion plant shifts nitrogen mineralization to immobilization at high but not low temperature in an alpine meadow

Aims

We evaluated the effects of temperature and addition of leaf litter of Androsace tapete MaximWe–a dominant cushion plant species of alpine meadows on the Tibetan Plateau–on carbon (C) and nitrogen (N) mineralization, microbial biomass C (MBC) and N (MBN).

Methods

A laboratory incubation experiment with and without cushion plant litter addition was conducted for 112 days at three temperature regimes (?1, 5 and 11 °C). C and net N mineralization were simultaneously measured during the incubation period.

Results

C and N mineralization were affected by interactions between litter addition and temperature. Litter addition increased C mineralization and MBN but shifted N mineralization to immobilization at higher temperature. The positive relationship between net N mineralization and MBC and MBN was shifted to a negative one through cushion plant litter addition. Cushion plant litter also changed the relationship between C mineralization and net N mineralization from insignificantly positive to significantly negative.

Conclusions

These findings indicate that low temperature in winter could be important for alpine plants because low temperature can increase net N mineralization and supply plants with available N for their growth in the early growing season. During the growing season, climate warming–either directly through a temperature effect or indirectly through triggering increased cushion plant litter production–might lead to stronger competition for N between alpine plants and microorganisms.     

Warming and increased precipitation frequency on the Colorado Plateau: implications for biological soil crusts and soil processes

Aims

Changes in temperature and precipitation are expected to influence ecosystem processes worldwide. Despite their globally large extent, few studies to date have examined the effects of climate change in desert ecosystems, where biological soil crusts are key nutrient cycling components. The goal of this work was to assess how increased temperature and frequency of summertime precipitation affect the contributions of crust organisms to soil processes.

Methods

With a combination of experimental 2°C warming and altered summer precipitation frequency applied over 2?years, we measured soil nutrient cycling and the structure and function of crust communities.

Results

We saw no change in crust cover, composition, or other measures of crust function in response to 2°C warming and no effects on any measure of soil chemistry. In contrast, crust cover and function responded to increased frequency of summer precipitation, shifting from moss to cyanobacteria-dominated crusts; however, in the short timeframe we measured, there was no accompanying change in soil chemistry. Total bacterial and fungal biomass was also reduced in watered plots, while the activity of two enzymes increased, indicating a functional change in the microbial community.

Conclusions

Taken together, our results highlight the limited effects of warming alone on biological soil crust communities and soil chemistry, but demonstrate the substantially larger effects of altered summertime precipitation.     

Soil microorganisms respond to five years of climate change manipulations and elevated atmospheric CO2 in a temperate heath ecosystem

Background and aims

Soil microbial responses to global change can affect organic matter turnover and nutrient cycling thereby altering the overall ecosystem functioning. In a large-scale experiment, we investigated the impact of 5 years of climate change and elevated atmospheric CO₂ on soil microorganisms and nutrient availability in a temperate heathland.

Methods

The future climate was simulated by increased soil temperature (+0.3 °C), extended pre-summer drought (excluding 5–8 % of the annual precipitation) and elevated CO₂ (+130 ppm) in a factorial design. Soil organic matter and nutrient pools were analysed and linked to microbial measures by quantitative PCR of bacteria and fungi, chloroform fumigation extraction, and substrate-induced respiration to assess their impact of climate change on nutrient availability.

Results

Warming resulted in higher measures of fungi and bacteria, of microbial biomass and of microbial growth potential, however, this did not reduce the availability of nitrogen or phosphorus in the soil. Elevated CO₂ did not directly affect the microbial measures or nutrient pools, whereas drought shifted the microbial community towards a higher fungal dominance.

Conclusions

Although we were not able to show strong interactive effects of the global change factors, warming and drought changed both nutrient availability and microbial community composition in the heathland soil, which could alter the ecosystem carbon and nutrient flow in the long-term.     

Warming and grazing increase mineralization of organic P in an alpine meadow ecosystem of Qinghai-Tibet Plateau, China

Background and aims

Little is known about the soil phosphorus (P) biogeochemical cycling in response to combined warming and grazing, especially in the alpine meadow ecosystem of the Qinghai-Tibet Plateau. Here, we used a free-air temperature enhancement system in a controlled warming-grazing experiment to test the hypothesis that combined warming and grazing would significantly accelerate mineralization of soil organic P.

Methods

A two factorial design of warming (1.2–1.7°C temperature increase) and moderate grazing was utilized. A fractionation method was applied to investigate the sizes of different soil inorganic and organic P fractions.

Results

Results showed that both warming and grazing significantly decreased the quantity of organic P extracted by first NaOH (N(I)Po), as well as the total extractable organic P (TPo) at the 0–10?cm depth. Warming also decreased the total P of soil at 0–10?cm. The combined warming and grazing treatment (WG) led to the reduction of major soil organic P fractions (N(I)Po, TPo) by 40–48% and 28–32%, respectively compared with other treatments at 0–10?cm. The activities of acid and alkaline phosphomonoesterase (AcPME and AlPME) were both enhanced by warming and grazing, and their interaction. Decreased concentrations of soil N(I)Po and TPo were accompanied by increased AcPME activity (P?<?0.01) and soil temperature (P?<?0.05), indicating the enhanced mineralization of organic P under rising temperature. Meanwhile, leaf biomass P of two major species (Potentilla anserine and Gentiana straminea) within these plots were significantly enhanced by either grazing or warming.

Conclusions

The microbial mineralization of soil organic P could be strongly increased under combined warming and grazing conditions as driven by increasing plant demand for P and enhanced microbial activities.     

The impact of <Emphasis Type="Italic">Carpobrotus</Emphasis> cfr. <Emphasis Type="Italic">acinaciformis</Emphasis> (L.) L. Bolus on soil nutrients,microbial communities structure and native plant communities in Mediterranean ecosystems

Background and aims

Carpobrotus spp. are amongst the most impactful and widespread plant invaders of Mediterranean habitats. Despite the negative ecological impacts on soil and vegetation that have been documented, information is still limited about the effect by Carpobrotus on soil microbial communities. We aimed to assess the changes in the floristic, soil and microbial parameters following the invasion by Carpobrotus cfr. acinaciformis within an insular Mediterranean ecosystem.

Methods

Within three study areas a paired-site approach, comparing an invaded vs. a non-invaded plot, was established. Within each plot biodiversity indexes, C and N soil content, pH and microbial biomass and structure (bacterial and fungal) were assessed.

Results

Invaded plots showed a decrease of α-species richness and diversity. The least represented plant species in invaded plots were those related to grassland habitats. In all invaded soils, a significant increase of carbon and nitrogen content and a significant decrease of pH were registered. Carpobrotus significantly increased bacterial and fungal biomass and altered soil microbial structure, particularly favoring fungal growth.

Conclusions

Carpobrotus may deeply impact edaphic properties and microbial communities and, in turn, these strong modifications probably increase its invasive potential and its ability to overcome native species, by preventing their natural regeneration.

     

Aspect-vegetation complex effects on biochemical characteristics and decomposability of soil organic carbon on the eastern Qinghai-Tibetan Plateau

Background

Meadows and shrublands are two major vegetation types on the Qinghai-Tibetan Plateau, but little is known about biochemical characteristics and its relation to decomposability of soil organic carbon (OC) under these two vegetation types. The present study was designed to evaluate effects of aspect-vegetation complex on biochemical characteristics and decomposability of soil OC.

Methods

Two hills were randomly selected; both with vegetation being naturally divided into southward meadows and northward shrublands by a ridge, and soils were sampled at depths of 0–15 and 15–30 cm, along contours traversing the meadow and shrubland sites. Particulate (particle size 2–0.05 mm) OC and nitrogen (N), microbial biomass C and N, non-cellulosic sugars, and CuO lignin were analyzed, and OC mineralization was measured for 49 days at 18 and 25 °C under laboratory incubation, respectively.

Results

More than half of soil OC was present as particulate fraction across all samples, indicating the coarse nature of soil organic matter in the region. Averaging over depths, shrublands contained 87.7???114.1 g OC and 7.7???9.3 g N per kg soil, which were 63???78 and 26???31 % higher than those in meadows, respectively. Meanwhile the C/N ratio of soil organic matter was 11.4???12.3 under shrublands, being 29???40 % higher than that under meadows. Soil OC under meadows was richer in noncellulosic carbohydrates and microbial biomass in the 0–15 and 15–30 cm depths but contained less lignin in the 15–30 cm depth. Ratios of microbially- to plant-derived monosaccharides and between acid and aldehyde of the vanillyl units were greater in soils under shrublands, showing more abundant microbially-derived sugars and microbially-transformed ligneous substances in OC as compared to meadow soils. By the end of 49 days’ incubation, total CO₂–C evolution from soils under meadows was 15.0–16.2 mg g^?1 OC averaging over incubation temperatures and soil depths, being 27–55 % greater than that under shrublands. Across all soil samples over two sites, total CO₂ ? C evolved per g OC at either 18 or 25 °C was closely correlated to enrichments of noncellulosic carbohydrates and microbial biomass. This indicates that the greater soil OC decomposability under meadows was associated with its larger abundances of readily mineralizable fractions compared with shrublands. However, temperature increase effect on soil OC decomposability did not differ between the two types of vegetation.

Conclusions

Our findings suggest that the aspect-vegetation complex significantly affected pool size, biochemical characteristics, and decomposability of soil OC on the northeastern edge of Qinghai-Tibetan Plateau. However, the response of soil OC decomposability to temperature was similar between southward meadows and northward shrublands.     

Effects of forest wildfire on soil microbial-community activity and chemical components on a temporal-seasonal scale

Background

Soil response and rehabilitation after wildfires are affected by natural environmental factors such as seasonality, and other time-dependent changes, such as vegetation recovery (e.g., % soil cover). These changes affect soil microbial-community activity. During summer 2006, almost 1,200 hectares (ha) of coniferous forest in northern Israel, including Byria Forest, burned.

Methods

Soil samples were collected seasonally from severely burned and unburned areas, on a time scale of 7?days to 4?years after wildfire. Chemical and microbial parameters of the forest soil system were examined.

Results

Results obtained show that increase in total soluble nitrogen (TSN) in burned areas may limit microbial activity during the first year after wildfire. Two years after wildfire, soil TSN levels in burned areas decreased to unburned levels after plant growth, allowing the microbial community to proliferate.

Conclusions

Wildfire had a significant impact on TSN, soil moisture (SM), and microbial nitrogen (MBN) compared to seasonality. These parameters are recommended for monitoring post-fire soil state. The direct effect of wildfire on soil constituents at the study site was stronger during the first 2–4?years. Indirect changes due to vegetation cover could have a longer effect on burned soil systems and should be further examined.     

Phytoremediation of soil co-contaminated with heavy metals and deca-BDE by co-planting of Sedum alfredii with tall fescue associated with Bacillus cereus JP12

Aim

The objective of this study was to develop a remediation strategy for soil co-contaminated with decabromodiphenyl ether (BDE-209) and heavy metals (Cd, Pb and Zn) using co-plantation of the hyperaccumulator plant (Sedum alfredii) with tall fescue (Festuca arundinaceae) associated with a BDE degrader (Bacillus cereus strain JP12).

Methods

A 120-day remediation experiment was conducted under greenhouse conditions. S. alfredii and tall fescue were grown in monoculture and intercropped in artificially contaminated soil. Plant biomass, concentration of polybrominated diphenyl ethers, density of soil bacteria, soil enzyme activity, and the physiological profile of the soil microbial community were determined.

Results and discussion

Inoculation with JP12 significantly increased BDE-209 dissipation in soil. Phytoextraction of metals was also enhanced by JP12 inoculation due to the improved plant growth. Planting of tall fescue significantly enhanced BDE-209 dissipation as compared to that in the bare soil because of the increased soil microbial activity. Tall fescue showed higher Pb phytoextraction efficiency than S. alfredii, but Pb was principally retained in the roots of tall fescue. BDE-209 dissipation and metal phytoextraction were highest when co-planting S. alfredii with tall fescue inoculated with strain JP12. Pyrosequencing analysis revealed that the inoculated JP12 could functionally adapt to the introduced soil, against competition with indigenous microorganisms in soil.

Conclusions

Co-planting of S. alfredii with tall fescue combined with BDE-degrading bacterial strain JP12 is promising for remediation of soil co-contaminated with BDE-209 and metals.     

Composition and activity of rhizosphere microbial communities associated with healthy and diseased greenhouse tomatoes

Aims

The goal of this study was to investigate the structure and functional potential of microbial communities associated with healthy and diseased tomato rhizospheres.

Methods

Composition changes in the bacterial communities inhabiting the rhizospheric soil and roots of tomato plants were detected using 454 pyrosequencing. Microbial functional diversity was investigated with BIOLOG technology.

Results

There were significant shifts in the microbial composition of diseased samples compared with healthy samples, which had the highest bacterial diversity. The predominant phylum in both diseased and healthy samples was Proteobacteria, which accounted for 35.7–97.4 % of species. The class Gammaproteobacteria was more abundant in healthy than in diseased samples, while the Alphaproteobacteria and Betaproteobacteria were more abundant in diseased samples. The proportions of pathogenic Ralstonia solanacearum and Actinobacteria species were also elevated in diseased samples. The proportions of the various bacterial populations showed a similar trend both in rhizosphere soil and plant roots in diseased versus disease-free samples, indicating that pathogen infection altered the composition of bacterial communities in both plant and soil samples. In terms of microbial activity, functional diversity was suppressed in diseased soil samples. Soil enzyme activity, including urease, alkaline phosphatase and catalase activity, also declined.

Conclusions

This is the first report that provides evidence that R. solanacearum infection elicits shifts in the composition and functional potential of microbial communities in a continuous-cropping tomato operation.     

Influence of agricultural practices and seasons on the abundance and community structure of culturable pseudomonads in soils under no-till management in Argentina

Background and aims

Members of the genus Pseudomonas are common inhabitants of rhizospheres and soils, and it is known that soil types and crop species influence their population density and structure. 20?×?10⁶ ha are cultivated under no-tillage in Argentina and there is a need to find new biologically-based soil quality indexes to distinguish between sustainable and non-sustainable agricultural practices. Pseudomonads abundance and community structure were analyzed in no-till soils with different agricultural practices, in productive fields along 400 km of Argentinean Pampas.

Methods

We sampled soils and root systems from agricultural plots in which sustainable or non-sustainable agricultural practices have been applied. Samples were collected in summer and winter during 2010 and 2011. Culturable fluorescent and total pseudomonads were enumerated by plating on Gould’s selective medium S1. Colonies from these plates served as DNA source to carry out PCR-RFLP community structure analysis of the pseudomonads-specific marker genes oprF and gacA.

Results

Abundance of total and fluorescent culturable pseudomonads in bulk soils was influenced by seasonal changes and agricultural practices. Rhizospheric counts from the same crop were affected by agricultural treatments. Also, crop species influenced pseudomonads density in the rhizosphere. Combined PCR-RFLP profile of both genes showed a seasonal grouping of samples.

Conclusions

Sustainable soil management seems to promote pseudomonads development in soils, favoring root colonization of crops from those plots. Crop species influence total pseudomonads load of rhizospheres and its community structure. Total or relative pseudomonads load could function as soil quality indicator of good agricultural practices.     

Temporal variation in microbial and plant biomass during summer in a Mediterranean high-mountain dry grassland

Aims

We assessed the temporal changes on microbial biomass in relation to changes in soil moisture, dissolved organic carbon and plant biomass during the summer season in a Mediterranean high-mountain grassland.

Methods

Temporal variations were tested by two-way ANOVA. The relationships among microbial biomass, plant biomass, soil water content, soil organic carbon, dissolved organic carbon and total soil nitrogen during the summer season were assessed by means of structural equation modeling.

Results

Microbial biomass did not show variation, while dissolved organic carbon and root biomass decreased throughout the summer. Aboveground plant biomass peaked in the middle of the summer, when soil water content was at its minimum. Soil water content directly and negatively affected soil microbial biomass, and positively affected dissolved organic carbon. Moreover soil microbial biomass and dissolved organic carbon were negatively related. Plant biomass effects on soil microbial biomass were driven by root biomass, which indirectly affected soil microbial biomass through effects on soil organic carbon and soil nitrogen.

Conclusions

The temporal dynamic of microbial biomass during the summer season appeared to differ from previous observations in temperate alpine communities, and indicated the drought resistance of the microbial community during the summer in Mediterranean high-mountain grasslands. During the dry period, microbial biomass may play an alternative role in soil carbon conservation.     

Minor contribution of leaf litter to N nutrition of beech (Fagus sylvatica) seedlings in a mountainous beech forest of Southern Germany

Aims

Our aims were to characterize the fate of leaf-litter-derived nitrogen in the plant-soil-microbe system of a temperate beech forest of Southern Germany and to identify its importance for N nutrition of beech seedlings.

Methods

¹⁵N-labelled leaf litter was traced in situ into abiotic and biotic N pools in mineral soil as well as into beech seedlings and mycorrhizal root tips over three growing seasons.

Results

There was a rapid transfer of ¹⁵N into the mineral soil already 21 days after tracer application with soil microbial biomass initially representing the dominant litter-N sink. However, ¹⁵N recovery in non-extractable soil N pools strongly increased over time and subsequently became the dominant ¹⁵N sink. Recovery in plant biomass accounted for only 0.025 % of ¹⁵N excess after 876 days. After three growing seasons, ¹⁵N excess recovery was characterized by the following sequence: non-extractable soil N?>>?extractable soil N including microbial biomass?>>?plant biomass?>?ectomycorrhizal root tips.

Conclusions

After quick vertical dislocation and cycling through microbial N pools, there was a rapid stabilization of leaf-litter-derived N in non-extractable N pools of the mineral soil. Very low ¹⁵N recovery in beech seedlings suggests a high importance of other N sources such as root litter for N nutrition of beech understorey.     

Microbial communities may modify how litter quality affects potential decomposition rates as tree species migrate

Background and aims

Climate change alters regional plant species distributions, creating new combinations of litter species and soil communities. Biogeographic patterns in microbial communities relate to dissimilarity in microbial community function, meaning novel litters to communities may decompose differently than predicted from their chemical composition. Therefore, the effect of a litter species in the biogeochemical cycle of its current environment may not predict patterns after migration. Under a tree migration sequence we test whether litter quality alone drives litter decomposition, or whether soil communities modify quality effects.

Methods

Litter and soils were sampled across an elevation gradient of different overstory species where lower elevation species are predicted to migrate upslope. We use a common garden, laboratory microcosm design (soil community x litter environment) with single and mixed-species litters.

Results

We find significant litter quality and microbial community effects (P?<?0.001), explaining 47 % of the variation in decomposition for mixed-litters.

Conclusion

Soil community effects are driven by the functional breadth, or historical exposure, of the microbial communities, resulting in lower decomposition of litters inoculated with upslope communities. The litter x soil community interaction suggests that litter decomposition rates in forests of changing tree species composition will be a product of both litter quality and the recipient soil community.     

Soil nutrients and microbial biomass in three contrasting Mediterranean forests

Aims

The extent to which the spatial and temporal patterns of soil microbial and available nutrient pools hold across different Mediterranean forest types is unclear impeding the generalization needed to consolidate our understanding on Mediterranean ecosystems functioning.

Methods

We explored the response of soil microbial, total, organic and inorganic extractable nutrient pools (C, N and P) to common sources of variability, namely habitat (tree cover), soil depth and season (summer drought), in three contrasting Mediterranean forest types: a Quercus ilex open woodland, a mixed Q. suber and Q. canariensis woodland and a Pinus sylvestris forest.

Results

Soil microbial and available nutrient pools were larger beneath tree cover than in open areas in both oak woodlands whereas the opposite trend was found in the pine forest. The greatest differences in soil properties between habitat types were found in the open woodland. Season (drought effect) was the main driver of variability in the pine forest and was related to a loss of microbial nutrients (up to 75 % loss of N_mic and P_mic) and an increase in microbial ratios (C_mic/N_mic, C_mic/P_mic) from Spring to Summer in all sites. Nutrient pools consistently decreased with soil depth, with microbial C, N and P in the top soil being up to 208 %, 215 % and 274 % larger than in the deeper soil respectively.

Conclusions

Similar patterns of variation emerged in relation to season and soil depth across the three forest types whereas the direction and magnitude of the habitat (tree cover) effect was site-dependent, possibly related to the differences in tree species composition and forest structure, and thus in the quality and distribution of the litter input.     

Soil N forms and gross transformation rates in Chinese subtropical forests dominated by different tree species

Background and aims

Knowledge related to extent of differing soil N forms and N transformation rates in subtropical southern China is severely limited. Accordingly, the purpose of this study was to investigate if and how tree species of different foliage types (coniferous, deciduous, and evergreen broadleaved) influence N forms and microbial biomass carbon (MBC) and microbial biomass nitrogen (MBN) content as well as gross N transformation rates in the organic and mineral soils of three distinct subtropical forests in China.

Methods

Chloroform fumigation extraction was used to determine MBC and MBN content while ¹⁵N-isotope dilution techniques were used to measure gross N transformation rates. Canonical correspondence analysis (CCA) was used to quantify relationships between soil chemical characteristics and changes in soil N transformation rates.

Results

Soil N forms, MBC and MBN content, and N transformation rates were found to be significantly different between tree species. Deciduous forest soil exhibited the highest N transformation rates. Soil N transformation rates were closely associated with total soil C and N and MBC and MBN content.

Conclusions

Soil substrate quantity and soil microbial activity play a more important role in soil N transformation processes than does soil quality in China’s subtropical forests. Tree species type should therefore be taken into account when trying to determine ecosystem N cycling.     

Effect of methyl 3-4-hydroxyphenyl propionate, a Sorghum root exudate, on N dynamic, potential nitrification activity and abundance of ammonia-oxidizing bacteria and archaea

Aims

It has been reported that root exudates of Sorghum bicolor can inhibit nitrification in a bioassay using Nitrosomonas, and methyl 3-(4-hydroxyphenyl) propionate (MHPP) was identified as one of the nitrification inhibiting compounds. Therefore, we have investigated the effects of this compound on nitrogen dynamic, potential nitrification activity and on soil microorganisms.

Methods

We conducted soil incubation experiments using synthetic MHPP to evaluate its effect on changes in inorganic soil nitrogen pools, on nitrification activity and on abundance of ammonia-oxidizing bacteria and archaea. Addition of MHPP at two concentrations equivalent to 70 and 350 μg C g^?1 soil was compared to glucose as a carbon source and to the commercially available nitrification inhibitor dicyandiamide (DCD).

Results

Soil amended with the high dose of MHPP and with DCD showed reduced nitrate content and low nitrification activity after 3 and 7 days of incubation. This was mirrored by a 70 % reduction in potential nitrification activity compared to a nitrogen-only control. None of the incubation treatments affected non-target microbial counts as estimated by 16S rRNA gene copy numbers, however, the high dose of MHPP significantly reduced the abundance of ammonia-oxidizing bacteria and archaea.

Conclusions

These findings suggest that MHPP is capable of suppressing nitrification in soil, possibly by reducing the population size and activity of ammonia-oxidizing microorganisms.     

Impact of the invasive tree black locust on soil properties of Mediterranean stone pine-holm oak forests

Background and aims

Invasion by N₂-fixing species may alter biogeochemical processes. We hypothesized that the grade of invasion by the N₂-fixer black locust (Robinia pseudoacacia L.) could be related to the distribution and pools of carbon (C) and nitrogen (N) along the profile of two Mediterranean mixed forests of stone pine (Pinus pinea L.) and holm oak (Quercus ilex L.).

Methods

A low-invaded (LIN) and a high-invaded (HIN) mixed forest were studied. We assessed: N concentration in green and in senescent leaves; C and N pools along the soil profile; seasonal changes of soluble C and N fractions, and microbial activity.

Results

Compared to coexisting holm oak and stone pine, black locust had higher N content in green and in senescent leaves. In the mineral soil: N stocks were similar in LIN and HIN; water soluble C and microbial activity, were lower in HIN compared to LIN; water soluble N showed seasonal changes consistent with tree growth activity in both HIN and LIN. In the organic layer of HIN, C and N stocks were about twofold larger than expected on the basis of stand density.

Conclusion

Black locust increased C and N stocks in the upper organic layers that are more vulnerable to disturbance. However, it did not increase N stocks in the mineral soil.     

Growth response of crops to soil microbial communities from conventional monocropping and tree-based intercropping systems

Background and aims

Recent studies have shown that tree-based intercropping (TBI) systems support a more diverse soil microbial community compared to conventional agricultural systems. However, it is unclear whether differences in soil microbial diversity between these two agricultural systems have a functional effect on crop growth.

Methods

In this study, we used a series of greenhouse experiments to test whether crops respond differently to the total soil microbial community (Experiment 1) and to arbuscular mycorrhizal (AM) fungal communities alone (Experiment 2) from conventionally monocropped (CM) and TBI systems.

Results

The crops had a similar growth response to the total soil microbial communities from both cropping systems. However, when compared to sterilized controls, barley (Hordeum vulgare) and canola (Brassica napus) exhibited a negative growth response to the total soil microbial communities, while soybean (Glycine max) was unaffected. During the AM fungal establishment phase of the second experiment, ‘nurse’ plants had a strong positive growth response to AM fungal inoculation, and significantly higher biomass when inoculated with AM fungi from the CM system compared to the TBI system. Soybean was the only crop species to exhibit a significant positive growth response to AM fungal inoculation. Similar to the total soil microbial communities, AM fungi from the two cropping systems did not differ in their effect on crop growth.

Conclusion

Overall, AM fungi from both cropping systems had a positive effect on the growth of plants that formed a functional symbiosis. However, the results from these experiments suggest that negative effects of non-AM fungal microbes are stronger than the beneficial effects of AM fungi from these cropping systems.     

Impact of historic grazing on steppe soils on the northern Tibetan Plateau

Aims

Few studies have focused on changes in the physical and chemical properties of soils that are induced by grazing at high altitudes. Our aim was to identify potential responses of soil to grazing pressure on the semiarid steppe of the northern Tibetan Plateau and their probable causes.

Methods

Fractal geometry to describe soil structure, soil dynamics, and physical processes within soil is becoming an increasingly useful tool that allows a better understanding of the performance of soil systems. In this study, we sampled four experimental areas in the northern part of the Tibetan Plateau under different grazing intensities: ungrazed, lightly grazed, moderately grazed and heavily grazed plots. Fractal methods were applied to characterise particle-size distributions and pore patterns of soils under different grazing intensities.

Results

Our results reveal a highly significant decrease in the fractal dimensions of particle size distributions (D ₁ ) and the fractal dimensions of all pores (D ₂ ) with increasing grazing intensity. Soil organic carbon (SOC), total N and total P concentrations increased significantly with decreasing grazing intensity. We did not find differences in soil pH in response to grazing.

Conclusions

Grazing induced a significant deterioration of the physical and chemical topsoil properties in the semiarid steppe of the northern Tibetan Plateau. Fractal dimensions can be a useful parameter for quantifying soil degradation due to human activities.