Non-wadeable river bioassessment: spatial variation of benthic diatom assemblages in Pacific Northwest rivers,USA

Current bioassessment efforts are focused on small wadeable streams, at least partly because assessing ecological conditions in non-wadeable large rivers poses many additional challenges. In this study, we sampled 20 sites in each of seven large rivers in the Pacific Northwest, USA, to characterize variation of benthic diatom assemblages among and within rivers relative to environmental conditions. Analysis of similarity (ANOSIM) indicated that diatom assemblages were significantly different among all the seven rivers draining different ecoregions. Longitudinal patterns in diatom assemblages showed river-specific features. Bray–Curtis dissimilarity index values did not increase as a function of spatial distance among the sampled reaches within any river but the Malheur. Standardized Mantel r of association between assemblage similarity and spatial distance among sites ranged from a high of 0.69 (Malheur) to a low of 0.18 (Chehalis). In the Malheur River, % monoraphids, nitrogen-tolerant taxa, and beta-mesosaprobous taxa all decreased longitudinally while % motile taxa, especially Nitzschia, showed an opposite trend, reflecting a strong in-stream water quality gradient. Similar longitudinal trends in water quality were observed in other rivers but benthic diatom assemblages showed either weak response patterns or no patterns. Our study indicated that benthic diatom assemblages can clearly reflect among-river factors. The relationships between benthic diatom assemblages and water quality within each river may depend on the strength of the water quality gradients, interactive effects of water quality and habitat conditions, and diatom sampling design.     

Impact of Urban Pollution from the Hanoi Area on Benthic Diatom Communities Collected from the Red, Nhue and Tolich Rivers (Vietnam)

The effects of urban pollution from Hanoi city on the benthic diatom communities of the Nhue–Tolich river system were studied during the 2003 dry season. Benthic diatoms were allowed to grow on glass slides suspended in the water flow for 4 weeks. To reveal the relationship between water quality and diatom communities, Canonical correspondence analysis (CCA) was used on data concerning relative abundances of diatom species and environmental variables. Two diatom indices, IPS and DAIpo, were applied to evaluate water quality in the three rivers. A total of 291 diatom taxa were found in the Red, Nhue and Tolich Rivers. These were mainly cosmopolitan taxa, with some tropical, subtropical and endemic taxa. The most abundant taxa at the Red site were Aulacoseira granulata, Achnanthidium minutissimum, Encyonema minutum, Navicula recens and other halophilous taxa such as Nitzschia kurzii, Seminavis strigosa, Entomoneis paludosa, Bacillaria paradoxa. Diatom assemblages at the Tolich site consisted mainly of Nitzschia umbonata, Nitzschia palea and Eolimna minima. Diatom density ranged from 660 to 30,000 cells/cm². Environmental variables and diatom assemblage composition at all sites were significantly correlated. Two diatom indices gave similar results and indicate the Tolich River with the lowest values as a highly polluted site.     

Epilithic diatoms as indicators in tropical African rivers (Lake Victoria catchment)

We investigated epilithic diatoms in rivers draining to the Nyanza Bay in Lake Victoria (Kenya) with the aim of determining environmental gradients in the assemblages and testing the usefulness of diatom metrics from temperate regions. Spatial and temporal variations of assemblages were studied in 12 sites of three rivers. Kibos, Nyando, and Kisat rivers contained 224 diatom taxa collected on seven sampling occasions over 4 years. Species richness showed a marginal decrease downstream and was the lowest at sites with high conductivity and ammonia–nitrogen levels. Two-Way Indicator Species Analysis and Canonical Correspondence Analysis revealed two major groups of river sites. Conductivity, alkalinity, turbidity, dissolved oxygen, and silicate were the most important variables influencing species distribution. Ecological diatom metrics of temperate regions and the Specific Pollution sensitivity Index showed good relationships with environmental variables. Both diatom assemblages and averaged indicator values were strong in predicting sites of ecological deterioration and in differentiating an upstream site of better quality (drinking water supply of Kisumu), thereby confirming epilithic diatoms as suitable water quality indicators in equatorial rivers. The use of metrics initially designed for temperate rivers, however, appears less valuable in good quality tropical rivers because potential indicators are not considered.     

Ecology of the Major Periphytic Diatom Communities from the Mesta River,Bulgaria

Epilithon, epiphyton, epipelon, epipsammon and plocon diatom samples and water chemistry samples were collected bimonthly from 11 stations along the Mesta River, Bulgaria between December 1989 and April 1991. Principal component analysis (PCA), correlation, and dominance analysis were employed for describing the seasonal dynamics of diatom assemblages and estimating the correlation between diatom distribution and the physico-chemical parameters. All periphytic communities were compared by PCA, MANOVA and Fisher's LSD multiple comparison test. Ionic strength and eutrophication were the major abiotic factors affecting diatom distribution in the epilithon, epiphyton, epipelon and epipsammon. Current velocity had an important influence on the diatom assemblages from the epilithon and epiphyton. Epilithon showed the lowest correlation with most of the environmental factors and had significantly lower species diversity than epiphyton, epipelon and epipsammon. Multivariate analysis of the diatom data suggested that in all benthic habitats of the Mesta River seasonal replacement of diatom assemblages was controlled by the water chemistry rather than substratum, current velocity or discharge. The oligotrophic, mesotrophic and eutrophic diatom communities in the Mesta River comprised early-, mid- and late-successional colonizers respectively. Multiple comparisons of all periphytic communities showed that habitat specificity was positively correlated with current velocity.     

Copepod communities related to water masses in the southwest East China Sea

The East China Sea is characterized by a complex hydrographic regime and high biological productivity and diversity. This environmental setting in particular challenged a case study on the use of mesozooplankton community parameters as indicators of water masses. In order to reveal spatial patterns of zooplankton communities during summer, a large scale oceanic transect study was conducted. Two transects were taken in the southwest East China Sea region, covering for the first time the China shelf, slope, and the estuaries of the Yangtze river and of the Minjiang river, the northern Taiwan Strait, and the Kuroshio Current region. A total of 77 copepod species were quantified. Copepod abundance was significantly higher in the estuary of the Yangtze River runoff mixture waters and lowest at the Kuroshio Current Region. The calanoid Parvocalanus crassirostris was the most frequently occurring and abundant species retrieved from 27 samples of a total of 39 samples. The use of multivariate cluster analysis separated the Mainland China Shelf from the northern Taiwan Strait and the Kuroshio Current Region at the first hierarchical level. The use of an indicator value method (IndVal) associated with each cluster of stations revealed characteristic species assemblages. Two hierarchical levels defined 4 assemblages within geographical sectors representing copepod assemblages of the Kuroshio Current Region, of the northern Taiwan Strait and the southern China Shelf near the estuary of the Minjiang River and northern stations near the estuary of the Yangtze River. Overall, there was a strong correspondence between the distribution of certain copepod species and water masses. Differences between the Mainland China shelf, the northern Taiwan Strait and the Kuroshio Current Region were characterized by differences in species composition and abundance. Water mass boundaries in the study area were exclusively indicated by distinct differences in species composition, emphasizing a correlation between copepod communities and water masses of the southwest East China Sea in summer.     

Assessing ecological status with diatoms DNA metabarcoding: Scaling-up on a WFD monitoring network (Mayotte island,France)

Diatoms are excellent ecological indicators of water quality because they are broadly distributed, they show high species diversity and they respond rapidly to human pressures. In Europe, the Water Framework Directive (WFD) gives the legal basis for the use of this indicator for water quality assessment and its management. Several quality indices, like the Specific Polluosensitivity Index (SPI), were developed to assess the ecological quality status of rivers based on diatom communities. It is based on morphological identifications and count of diatom species present in natural biofilms using a microscope. This methodology requires high taxonomic skills and several hours of analysis per sample as 400 individuals must be identified to species level. Since several years, a molecular approach based on DNA metabarcoding combined to High-Throughput Sequencing (HTS) is developed to characterize species assemblages in environmental samples which is potentially faster and cheaper. The ability of this approach to provide reliable diatom inventories has been demonstrated and its application to water quality assessment is currently being improved. Despite optimization of the DNA metabarcoding process with diatoms, few studies had yet extended it at the scale of a freshwater monitoring network and evaluated the reliability of its quality assessment compared to the classical morphological approach.In the present study we applied DNA metabarcoding to the river monitoring network of the tropical Island Mayotte. This island is a French département since 2011 and the WFD has to be applied. This offered the opportunity to scale up the comparison of molecular and morphological approaches and their ability to produce comparable community inventories and water quality assessments. Benthic diatoms were sampled following WFD standards in 45 river sites in 2014 and 2015 (80 samples). All samples were submitted in parallel to the molecular and the morphological approaches. DNA metabarcoding was carried out using Genelute DNA extraction method, rbcL DNA barcode and PGM sequencing, while microscopic counts were carried out for the classical methodology. Diatom community structures in terms of molecular (OTUs) and of morphological (species) were significantly correlated. However, only 13% of the species was shared by both approaches, with qualitative and quantitative variation due to i) the incompleteness of the reference library (82% of morphological species are not represented in the database), ii) limits in taxonomic knowledge and iii) biases in the estimation of relative abundances linked to diatom cell biovolume. However, ecological quality status assessed with the molecular and morphological SPI values were congruent, and little affected by sequencing depth. DNA metabarcoding of diatom communities allowed a reliable estimation of the quality status for most of the rivers at the scale of the full biomonitoring network of Mayotte Island.     

171 Light-Induced Growth of Winter Phytoplankton Collected from the Benthic Boundary Layer in Coastal Oregon Waters

The objective of this study was to examine the influences of the adjacent river and surrounding landuse on wetland diatom distributional patterns. Diatoms were identified in surface sediment samples from 35 riverine-impounded wetlands within the Willamette Valley, OR. A total of 221 species were identified and no single species dominated the assemblage at all sites. Diatom richness was high throughout the area (median 71, range 66–75). The Araphidineae:Centrales index, a measure of periphytic to planktonic species ratio, was lowest at sites within the river's annual floodplain zone. A low A:C index is to be expected at wetlands that receive inputs of river planktonic species through regular flooding by adjacent large rivers. Surrounding landuse can confound the influence of riverine flooding on wetland diatom assemblages by influencing water quality. Relative abundance of the two most common species, Aulacoseira crenulata and Fragilaria capusina related negatively to % agricultural landuse surrounding the wetland. These results indicate that riverine wetland diatom assemblages may be influenced by flooding from adjacent rivers and surrounding landuse and therefore wetland sediment diatoms might serve as useful indicators of both historical environmental changes in nearby large rivers and surrounding watersheds.     

Mesohabitat-specific macroinvertebrate assemblage responses to water quality variation in mid-continent (North America) great rivers

We compared the responsiveness of macroinvertebrate assemblages to variation in water quality (ions, nutrients, dissolved metals, and suspended sediment) in two mesohabitats within the main channel of three North American great rivers, the Upper Mississippi, Missouri, and Ohio. Based on about 400 paired samples, we examined the responsiveness of benthic assemblages sampled in the littoral zone and assemblages sampled from the surface of woody snags in the main channel. The assemblages in the two mesohabitats were different in all rivers. Taxa richness was much higher in the benthos than on snags. Macroinvertebrate assemblage response to water quality variation was weak on the Mississippi River, but the reasons for this are unknown. Based on analysis of the similarity between the composition of assemblages from groups of sites with high and low concentrations of water quality variables, benthic assemblages were only slightly more sensitive to water chemistry variation than were snag assemblages. Results of two-sample comparisons between groups of sites with high and low concentrations of water quality variables were consistent with rank correlations of assemblage metrics with water quality. In general, there was little difference between habitats in response to variation in water quality on any river. Our simple method of snag sampling in great rivers is usually much easier than littoral benthic sampling because it does not require wading. Snag sampling in large rivers has some limitations (e.g., natural snags are sometimes absent, samples are semi-quantitative), but lack of sensitivity to water quality gradients compared to the benthos is not among them.     

Distribution of Epilithic Diatoms in Response to Environmental Conditions in an Urban Tropical Stream, Central Kenya

Use of diatoms in monitoring water quality is well acknowledged in developed countries, but only recently has the assessment started gaining importance in developing countries. Diatoms can be obtained from natural and artificial substrates. Appreciating the differences and similarities of diatom assemblages on both substrates may contribute to a better understanding and standardization particularly during monitoring of water quality. During this study we assessed diatom assemblages, biodiversity and trophic indices in relation to water quality along the Nairobi River. Fifteen sites were sampled in September 2000 during the dry season. Diatoms were collected from natural substrates (stones, pebbles) and artificial substrates (100% acrylic wool). On artificial and natural substrates, a total of 190 and 151 taxa were found, respectively, the majority of these taxa (80%) have cosmopolitan distribution and are also widespread throughout tropical African. Species composition changed downstream, five taxa dominated upper and mid stream sites whereas lower stream sites were dominated by one or two taxa. Species richness, diversity, dominance and evenness were positively correlated with NO₃, O₂ and altitude but decreased markedly downstream with a simultaneous increase in total dissolved solids, alkalinity, chemical oxygen demand and PO₄. Ordination and classification (CANOCO and TWINSPAN) showed that diatom assemblages in the Nairobi River responded strongly to water quality changes with respect to concentrations of NO₃, NO₂, total dissolved solids and temperature. Taxa common at less impacted upstream sites included Gomphonema gracilis, Anomoeoneis brachysira and Fragilaria biceps; while common taxa at midstream sites with agricultural catchments were Gomphonema parvulum, Navicula cryptocephala, N. schroeteri, N. bryophila, N. halophila, Nitzschia linearis var. linearis and Cymbella silesica. Achnanthes minutissima var. saprophila, Gomphonema angustum, Navicula subminuscula, N. arvensis, Nitzschia palea and N. umbonata were most common at urban sites, which were polluted by residential and industrial effluents. Trophic diatom indices suggested that water quality was poor at most sites in the Nairobi River. Most sites along the river had low Generic Diatom Index values, GDI (<12) and high Trophic Diatom Index values, TDI 73–78 (median = 76) and 75–84 (median = 77) for artificial and natural substrates, respectively. This study showed that diatoms' response on natural and artificial substrates were similar and reflected environmental conditions correctly.     

Variation of upwelling/oceanic conditions during the latest Pleistocene through Holocene off the central Peruvian coast: A diatom record

Diatoms are well preserved in partly laminated Holocene and late Pleistocene sediments on the upper continental slope of central Peru. Accumulation rates of diatom species previously recognized as tropical (oceanic, warm water) and subtropical (neritic, cooler water, upwelling) changed markedly downcore in Kasten cores obtained at 11°15′S, 12°58′S, and 13°37′S latitude. Subtropical species (e.g., Thalassiosira eccentrica “group”, Thalassiothrix frauenfeldii, Chaetoceros spp. resting spores, Delphineis spp.) predominated in late Pleistocene sediments of the two southern cores. A mix of tropical and subtropical diatom assemblages occurred in latest Pleistocene sediments, while tropical species (e.g., Coscinodiscus nodulifer/radiatus, Pseudoeunotia doliolus, Thalassionema nitzschioides var. parva) predominated in the late Holocene sediments. In the northern core latest Pleistocene sediments also contained a mix of tropical and subtropical species. Similarly, late Holocene sediments contained predominately tropical species of diatoms. Neoglacial periods (200–400 yr B.P., 2000–2700 yr B.P.), however, were sometimes characterized by a greater abundance of subtropical species and punctuated periodically with blooms of Skeletonema costatum and Rhizosolenia shrubsolei. It is proposed that during times of Southern Hemisphere cooling, Peruvian coastal waters north of 12°S were subjected to episodic mixing with warmer water masses before being overwhelmed by tropical waters that may have either passed southward across a weakened Equatorial Front or arose from intensified offshore countercurrents. Coastal waters south of 12°S latitude were probably unaffected by the tropical influence. Rather, these waters may have undergone intensified upwelling during the last Glacial epoch.     

170 Wetland Diatom Assemblages as Indicators of Flooding Influence and Surrounding Landuse in the Willamette Valley,OR

The objective of this study was to examine the influences of the adjacent river and surrounding landuse on wetland diatom distributional patterns. Diatoms were identified in surface sediment samples from 35 riverine‐impounded wetlands within the Willamette Valley, OR. A total of 221 species were identified and no single species dominated the assemblage at all sites. Diatom richness was high throughout the area (median 71, range 66–75). The Araphidineae:Centrales index, a measure of periphytic to planktonic species ratio, was lowest at sites within the river's annual floodplain zone. A low A:C index is to be expected at wetlands that receive inputs of river planktonic species through regular flooding by adjacent large rivers. Surrounding landuse can confound the influence of riverine flooding on wetland diatom assemblages by influencing water quality. Relative abundance of the two most common species, Aulacoseira crenulata and Fragilaria capusina related negatively to % agricultural landuse surrounding the wetland. These results indicate that riverine wetland diatom assemblages may be influenced by flooding from adjacent rivers and surrounding landuse and therefore wetland sediment diatoms might serve as useful indicators of both historical environmental changes in nearby large rivers and surrounding watersheds.     

Response of diatom indices to simulated water quality improvements in a river

Various diatom indices are routinely used in European countries to monitor water quality in waterways. In order to assess their sensitivities and their integration interval after a sudden and lasting environmental change, epilithic diatom biofilms were transferred from several polluted rivers to an unpolluted stream. To monitor the changes of the index values, the biofilms were sampled in a first experiment 20 and 40 days after transfer, and in a second experiment 30 and 60 days after transfer. Sensitivities of the indices to the water quality improvement were assessed calculating the differences between the index values of the reference and the transferred assemblages. Some indices have intermediate sensitivities (BDI, GDI, ILM, SLA), others higher sensitivities (CEE, EPI, ROT, SPI, TDI). The integration interval of these indices was 40–60 days. Some differences were observed between the indices, but their results were homogeneous when compared to those obtained with other metrics such as Bray-Curtis or Chord distances, used to assess the difference between the transferred and the reference diatom assemblages. These other metrics showed that even after 60 days, the transferred assemblages still differed from the reference. This underlines that metrics do not have the same integration intervals and do not assess the same stresses; the choice of the metric used to assess water quality is of prime importance.     

Changes in diatom-dominated biofilms during simulated improvements in water quality: implications for diatom-based monitoring in rivers

Although benthic diatoms are used to assess river water quality, there are few data on the rate at which diatom assemblages react to changes in water quality. The aim of this study was to assess the reaction time of diatoms and to discuss the changes occurring during water quality improvement on the basis of their autecological characteristics. In order to simulate this improvement, diatom-dominated biofilms grown on artificial sandstone substrata were transferred from several polluted rivers to an unpolluted river. They were sampled three times: before transfer and 1 and 2 months after transfer. The ecology and growth-forms of the taxa explained most of the changes in species composition observed during the experiment. Adnate diatoms gradually replaced motile and stalked taxa. Gomphonema parvulum, a stalked diatom positioned vertically in the biofilm, is adapted for light and space competition in high-density algal biofilms. When transferred to an unpolluted site, this growth-form is less competitive and does not tolerate the high grazing pressure. Fistulifera saprophila is a single celled motile diatom, living in organic matrices. When the artificial substrata were transferred to the unpolluted site, this particular ecological niche disappeared quickly. On the other hand, Achnanthidium minutissimum, which is considered to be cosmopolitan and an early colonizer, increased during the first month of transfer and then decreased. It was gradually replaced by A. biasolettianum, which was the taxon best suited to this pristine stream. The changes observed differed between treatments depending on the species composition and architecture of the biofilms. In particular, biofilms dominated by stalked and motile diatoms were more quickly modified than those dominated by small motile diatoms. The diatom index reflects these changes, and its values showed that about 60 days following a water quality improvement were necessary for transferred diatom assemblages to reach diatom index values similar as those at the unpolluted river.     

Zambian Invertebrate Scoring System (ZISS): A macroinvertebrate-based biotic index for rapid bioassessment of southern tropical African river systems

An extensive survey of tropical rivers, conducted during 2009–2012 throughout Zambia, collected 151 samples of benthic macroinvertebrates, located on 95 rivers in six of the nine freshwater ecoregions. Associated data for physico-chemistry, human activities and ecosystem stressors were collected. Data were used to develop and test a new Rapid Bioassessment Protocol (the Zambian Invertebrate Scoring System: ZISS) for assessment of water quality and river condition in both wadeable and non-wadeable rivers. ZISS, which is based on the South African Scoring System (SASS), includes a total of 85 taxa, of which 79 are shared with SASS. Assignment of sensitivity weightings to new ZISS taxa was based on sensitivity weightings of closely related SASS families; known life-history modes and anatomical adaptations; and correlation of occurrence to impact ratings. The ability of the ZISS to measure impacts was assessed by determining the relationships between ZISS metrics and impacts. ZISS data for the Kafue River demonstrated the efficacy of the ZISS for detecting moderate to high impacts on water quality and river condition. ZISS represents a major step in developing a user-friendly, widely applicable, macroinvertebrate-based biotic index, which can provide easily interpretable assessments of river condition for southern tropical African rivers.     

Characterization of diatom assemblages in mid-altitude streams of NW Italy

Following the European Water Framework Directive, this study aims to be the first step to (i) identify diatom type assemblages in unpolluted streams in NW Italy, and (ii) find which ecological factors explain most of the variation. To achieve this, we collected physical, chemical and benthic community data from four streams in NW Italy from 2001 to 2004, for a total of 72 samples. All sampling sites were between 200 m a.s.l. and 800 m a.s.l., but differed in the dominant lithological substrate, i.e. alluvial or siliceous. Relationships between diatom communities and environmental factors were examined using canonical correspondence analysis (CCA), while Indicator Species Analysis was used to define characterizing species and accompanying species of three environmental groups identified by CCA: (1) high water quality and medium saline content, (2) high water quality and low saline content, (3) poor water quality. The diatom assemblages of the three groups of sites differed significantly, as shown by the Multi-Response Permutation Procedure. There were strong correlations between diatoms and environmental factors, especially chlorides (also highly correlated with sulphates and carbonate hardness), nitrate concentration and conductivity. The group 1 assemblage was typical of the alluvial Alpine streams with medium saline content and was characterized by mostly oligosaprobic/β-mesosaprobic taxa such as Cymbella affinis, Diatoma ehrenbergii and Staurosira pinnata. The species assemblage found in the siliceous Alpine rivers with good water quality make them suitable reference sites for a benthic diatom community. Electronic Supplementary Material Supplementary material is available for this article at and accessible for authorised users Handling editor: K. Martens     

Choice of biota in stream assessment and monitoring programs in tropical streams: A comparison of diatoms,macroinvertebrates and fish

The objective of this study was to compare the responses of diatoms, macroinvertebrates and fish to agriculture, urbanization and mining in the Manyame River Basin. Water quality sampling and benthic diatom, macroinvertebrate and fish community data were collected in April (end of the rain season) and September (dry season) 2013 at 44 sampling stations spread out across three land-use categories: commercial agricultural, communal agricultural and urban-mining areas. Commercial agricultural areas were relatively pristine as they were characterized by mature deciduous riparian forest strips which acted as riparian buffers thus protecting water resources from nonpoint source pollution. In communal agricultural areas a combination of poor agricultural practices (stream bank cultivation, overgrazing, soil erosions) and high human population densities had negative effects on water quality of streams draining these areas. Streams in urban-mining areas were highly stressed, being impacted primarily by physical habitat degradation and both point and nonpoint sources of pollution. A suite of environmental variables that varied with land-use pattern was assessed to find the combination of variables that best explained patterns of biota community composition. Community metrics i.e. the Trophic Diatom Index (TDI) based on diatoms, the South African Scoring system version 5 (SASS 5) based on macroinvertebrates and the Fish Assemblage Integrity Index (FAII) were used to determine the ecological status of study streams in relation to human-induced stressors. Data were also subjected to multivariate statistical techniques; canonical correspondence analysis (CCA), mantel test and cluster analysis to determine environmental gradients along which the diatom, macroinvertebrate and fish assemblages were distributed as well as to elucidate hypothesized differences in response to stressors among communities per land-use type. Using CCA, we assessed the individual importance of a set of environmental variables on each biotic community structure. ANOVA, showed a significant difference (p < 0.05) in physical and chemical variables among commercial agricultural, communal agricultural and urban-mining sampling stations with no significant differences (p > 0.05) between the 2 sampling periods. Based on CCAs carried out using individual variables, the strengths of relationships between diatoms and macroinvertebrates was generally high for nutrient levels, organic and metal pollution and other variables. However, fish assemblages showed a relatively low association with all water quality variables in the study; this might be explained by the high abundance of omnivores and air breathers which are able to tolerate a variety of environmental conditions. These patterns were also confirmed by the mantel test as well as the other CCAs carried out to investigate the simultaneous effects of environmental variables. These findings indicate that diatoms are more powerful indicators in accessing ecological stream/river quality and have potential for application in routine monitoring programs in tropical streams.     

Geographical and seasonal patterns of epiphytic diatoms on a subtropical mangrove (Kandelia candel) in southern China

Geographical and seasonal patterns of epiphytic diatoms on a subtropical mangrove (Kandelia candel (L.) Druce) were examined at four sites in southern China. A total of one hundred and three epiphytic diatom species and varieties belonging to 40 genera were identified. Dominant species included Nitzschia fasciculata, Luticola mutica and Achnanthes javanica var. subcontricta. Further analysis using canonical correspondence analysis revealed three diatom associations which could be closely related to environmental variables such as salinity and nutrients resources of nitrogen and phosphate. Epiphytic diatom assemblages on roots would be a good indicator for the evaluation of water quality in mangroves.     

Fish larvae assemblages in the Gulf of California

The distributional diversity and assemblages of fish larvae in the Gulf of California indicated two main seasonal stages and two transitional periods: in winter, the tropical water mass is confined to the south‐east portion of the mouth of the Gulf and larval fish assemblages are dominated by subtropical and temperate‐subarctic species; in summer; tropical water invades the Gulf and assemblages are dominated by tropical species. Both seasonal stages are separated by transitional periods coinciding with strong latitudinal temperature gradients. During the autumn and spring transitional periods, the Gulf of California splits into three regions: a northern region where temperate and subarctic species spawn from autumn to spring, a southern region dominated by tropical and subtropical species year round and a central region where tropical and temperate assemblages merge. Seasonal changes in the location of the regions, as well as the borders between them, show expansion and contraction of the northern and southern faunas related to the general oceanic circulation patterns during the year.     

A 5-year study of the influence of the northeast and southwest monsoons on copepod assemblages in the boundary coastal waters between the East China Sea and the Taiwan Strait

Danshuei River in the northwestern tip of Taiwan dischargesinto the boundary coastal waters between the East China Seaand the Taiwan Strait. We conducted a 5-year study between October1998 and September 2003 to assess the influence of the northeast(NE) and the southwest (SW) monsoons on copepod assemblagesin the area. A total of 110 copepod species were identified.Temora turbinata, Paracalanus aculeatus, Acrocalanus gibber,Parvocalanus crassirostris and Oithona rigida comprised 80%of the copepod assemblages that consisted of coastal speciesfrom the East China Sea and species associated with the KuroshioBranch Current. The effect of the NE monsoon was observed duringa short period of each winter when species such as Calanus sinicuswere transported into the study area by the China Coastal Current.In summer, species such as A. gibber, Acrocalanus gracilis andCanthocalanus pauper may be transported into the study areafrom Southern Taiwan by the combined effect of the SW monsoonand the Kuroshio Current. Influence of the NE monsoon on thecopepod assemblages in terms of introduction of species fromthe Yellow Sea and the East China Sea during winter was observedevery year but was unlikely to represent an important carbonsource into the region due to its short-term nature. Local speciessuch as T. turbinata, P. crassirostris and O. rigida form amajor component of the copepod assemblage. The high copepoddiversity in the area was caused by the year-round presenceof many local species and the aggregation of different speciesfrom subtropical, tropical, and temperate water masses. Monsoon-drivenwater currents and the Kuroshio Branch Current appeared to maskthe effect of river discharge in the region.