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1.
THE initial reaction following absorption of light in the retina is the isomerization of the 11-cis retinal chromophore of the visual pigment1. Isolated 11cis retinal will undergo the same isomerization to the all-trans form when excited by light of wavelength shorter than about 450 nm and this reaction can be sensitized to light of longer wavelengths by the addition of trace amounts of iodine to the solution2.  相似文献   

2.
Studies on a Missing Reaction in the Visual Cycle   总被引:1,自引:0,他引:1  
DEVELOPMENT in the biochemistry of vision during the past twenty-five years can be summarized by equations (1) and (2) in Fig. 1, which envisage1 that 11-cis-retinal combines with the visual protein opsin in a dark reaction to form the photolabile complex rhodopsin, λmax 497 nm. When rhodopsin absorbs light it stimulates, through a process whose mechanism is not understood, the transmission of impulses, which are responsible for the visual sensation, although much is known about the biochemical changes accompanying the absorption of light by rhodopsin. These changes culminate in the formation of all-trans-retinal (λmax 385 nm) and opsin (equation (2), Fig. 1), through a number of intermediates2 and for the completion of the cycle one needs a molecular process which may regenerate 11-cis-retinal from all-trans-retinal (equation (3), Fig. 1).  相似文献   

3.
The vertebrate retina contains typical photoreceptor (PR) cones and rods responsible for day/night vision, respectively, and intrinsically photosensitive retinal ganglion cells (ipRGCs) involved in the regulation of non-image-forming tasks. Rhodopsin/cone opsin photopigments in visual PRs or melanopsin (Opn4) in ipRGCs utilizes retinaldehyde as a chromophore. The retinoid regeneration process denominated as “visual cycle” involves the retinal pigment epithelium (RPE) or Müller glial cells. Opn4, on the contrary, has been characterized as a bi/tristable photopigment, in which a photon of one wavelength isomerizes 11-cis to all-trans retinal (Ral), with a second photon re-isomerizing it back. However, it is unknown how the chromophore is further metabolized in the inner retina. Nor is it yet clear whether an alternative secondary cycle occurs involving players such as the retinal G-protein-coupled receptor (RGR), a putative photoisomerase of unidentified inner retinal activity. Here, we investigated the role of RGR in retinoid photoisomerization in Opn4x (Xenopus ortholog) (+) RGC primary cultures free of RPE and other cells from chicken embryonic retinas. Opn4x (+) RGCs display significant photic responses by calcium fluorescent imaging and photoisomerize exogenous all-trans to 11-cis Ral and other retinoids. RGR was found to be expressed in developing retina and in primary cultures; when its expression was knocked down, the levels of 11-cis, all-trans Ral, and all-trans retinol in cultures exposed to light were significantly higher and those in all-trans retinyl esters lower than in dark controls. The results support a novel role for RGR in ipRGCs to modulate retinaldehyde levels in light, keeping the balance of inner retinal retinoid pools.  相似文献   

4.
Sedimentation of Bovine Rhodopsin—Digitonin Micelles   总被引:1,自引:0,他引:1  
RHODOPSIN, the photo-sensitive pigment of vertebrate vision receptors, consists of the lipoprotein opsin bound to the 11-cis isomer of retinal. Light isomerizes the 11-cis configuration to the all-trans, which makes the pigment unstable, leading eventually to the dissociation of the retinal from the lipoprotein. The belief that these dark steps involve conformational changes in the lipoprotein moiety stems from spectroscopic measurements which show the disappearance of lipoprotein-chromophore interactions and from kinetic and thermodynamic considerations1–5, but more direct evidence has come from the changes in circular dichroism and optical rotatory dispersion which occur with bleaching6–9. There is also an increase of Stokes radius on bleaching11.  相似文献   

5.
Summary Two retinal-binding proteins (RBP-A and RBP-B) isolated from the honeybee retina were further purified by ion-exchange chromatography. Whereas RBP-A seems to be denatured by this procedure, RBP-B remains intact with respect to its photochemical characteristics (Fig. 3a). Analysis of the geometric isomers of retinal bound to RBP-B by high performance liquid chromatography demonstrated that all-trans retinal was the chromophore of the non-irradiated RBP-B. Irradiation converted RBP-B (max 440 nm) into a photoproduct (max 370 nm) the chromophore of which was 11-cis retinal, i.e., light isomerized all-trans retinal almost exclusively to the 11-cis form (Fig. 3b). Irradiation of a solution of RBP-B in the presence of excess all-trans retinal also led to the formation of 11-cis retinal indicating that RBP catalyzes the photoisomerization of all-trans retinal. The physiological significance of RBP-B is discussed with respect to the renewal of rhodopsin.Abbreviations RBP retinal-binding protein - HPLC high performance liquid chromatography  相似文献   

6.
The mechanisms of the formation of cyclobutane dimers (CBD) of cytosine and 2,4-diaminopyrimidine were studied at the CC2 theoretical level and cc-pVDZ basis functions. Four orientations of the two monomers are explored: cys-syn, cis-anti, trans-syn, and trans-anti. The research revealed that in all cases the cyclobutane structures are formed along the 1ππ* excited-state reaction paths of the stacked aggregates. We localized the S1/S0 conical intersections mediating those transformations. The results obtained agree well with the previously reported investigations on the cis-syn cyclodimer formations of other pyrimidines.  相似文献   

7.
9-cis-Retro-γ;rhodopsin (λmax = 420 nm) was prepared from 9-cis-retro-γ-retinal and cattle opsin. After cooling to liquid nitrogen temperature (77 K), the pigment was irradiated with light at 380 nm. The spectrum shifted to the longer wavelengths, owing to formation of a batho product. This fact indicates that the conjugated double bond system from C-5 to C-8 of the chromophoric retinal in rhodopsin was not necessary for formation of bathorhodopsin. Reirradiation of the batho product with light at wavelengths longer than 520 nm yielded a mixture composed of presumably 9- or 11-cis forms of retro-γ-rhodopsin. These three isomers are interconvertible by light at liquid nitrogen temperature. Thus the retro-γ-rhodopsin system is similar in photochemical reaction at 77 K to cattle rhodopsin system. Each system has its own batho product. Based on these results, it was infered that the formation of bathorhodopsin is due to photoisomerization of the chromophoric retinal of rhodopsin and is not due to translocation of a proton on the ring or on the side chain from C-6 to C-8 of the chromophoric retinal to the Schiff-base nitrogen.  相似文献   

8.
The ultraviolet absorbance of squid and octopus rhodopsin changes reversibly at 234 nm and near 280 nm in the interconversion of rhodopsin and metarhodopsin. The absorbance change near 280 nm is ascribed to both protein and chromophore parts. Rhodopsin is photoregenerated from metarhodopsin via an intermediate, P380, on irradiation with yellow light (λ > 520 nm). The ultraviolet absorbance decreases in the change from rhodopsin to metarhodopsin and recovers in two steps; mostly in the process from metarhodopsin to P380 and to a lesser extent in the process from P380 to rhodopsin. P380 has a circular dichroism (CD) band at 380 nm and its magnitude is the same order as that of rhodopsin. Thus it is considered that the molecular structure of P380 is close to that of rhodopsin and that the chromophore is fixed to opsin as in rhodopsin. In the change from metarhodopsin to P380, the chromophore is isomerized from the all-trans to the 11-cis form, and the conformation of opsin changes to fit 11-cis retinal. In the change from P380 to rhodopsin, a small change in the conformation of the protein part and the protonation of the Schiff base, the primary retinal-opsin link, occur.  相似文献   

9.
The molecular mechanisms that regulate invertebrate visual pigment absorption are poorly understood. Through sequence analysis and functional investigation of vertebrate visual pigments, numerous amino acid substitutions important for this adaptive process have been identified. Here we describe a serine/alanine (S/A) substitution in long wavelength-absorbing Drosophila visual pigments that occurs at a site corresponding to Ala-292 in bovine rhodopsin. This S/A substitution accounts for a 10–17-nm absorption shift in visual pigments of this class. Additionally, we demonstrate that substitution of a cysteine at the same site, as occurs in the blue-absorbing Rh5 pigment, accounts for a 4-nm shift. Substitutions at this site are the first spectrally significant amino acid changes to be identified for invertebrate pigments sensitive to visible light and are the first evidence of a conserved tuning mechanism in vertebrate and invertebrate pigments of this class.Organisms use color vision for survival behaviors such as foraging, mating, and predator avoidance (13). Color vision in invertebrates ranges from trichromatic systems capable of detecting UV, blue, and green (e.g. bees and flies) to the highly complex mantis shrimps (stomatopods) having 12 spectrally distinct classes of photoreceptor cells (4). Despite the diversity of invertebrate color vision systems and the large collection of naturally occurring visual pigments, important questions remain concerning the molecular mechanisms that regulate color sensitivity.In both vertebrates and invertebrates, the visual pigment rhodopsin consists of a chromophore (e.g. 11-cis retinal) covalently bound to an opsin apoprotein via a protonated Schiff base. Upon light absorption, the chromophore isomerizes from cis to all-trans, inducing conformational changes in the opsin that produce activated metarhodopsin. Specific interactions between the retinal chromophore and residues in the opsin tune the λmax of the chromophore. Studies have shown that Glu-113 (bovine position) serves as the retinylidene Schiff base counter-ion in vertebrate visual pigments (57). Removing the negative charge of the counter-ion from the binding pocket deprotonates the chromophore and yields a UV-absorbing pigment (57). Using sequence alignments, phylogenetic analysis, analysis of the bovine rhodopsin crystal structure (PDB2 entry 1U19), and functional experiments, a large number of amino acids involved in the spectral tuning of vertebrate visual pigments have been identified (8).In contrast, the counter-ion for invertebrate rhodopsin remains unknown, and only one spectrally relevant residue has been identified: an amino acid substitution in Drosophila pigments responsible for UV versus visible sensitivity (9). Interestingly, this amino acid substitution (Gly-90 in bovine rhodopsin) coincides with a substitution that mediates UV versus blue sensitivity in several bird species (10, 11). This discovery highlights the value of a cross-phyla comparison of visual pigments as a means to identify structural differences that may regulate color vision in invertebrates.In the present study, we identify an amino acid substitution in Drosophila visual pigments that regulates the color sensitivity of blue- and green-absorbing rhodopsins. For these studies, we employed sequence analysis of invertebrate and vertebrate visual pigments and a functional examination of mutant invertebrate opsins. This amino acid substitution red-shifts the λmax of the Drosophila Rh1 pigment and reciprocally blue-shifts the λmax of Rh6 pigment. Interestingly, this site also affects the spectral tuning of vertebrate pigments and corresponds to Ala-292 in bovine rhodopsin (8, 1216).  相似文献   

10.
11.
Sequential photo-and biodegradation of p-cresol was studied using a mercury lamp, as well as KrCl and XeCl excilamps. Preirradiation of p-cresol at a concentration of 10?4 M did not affect the rate of its subsequent biodegradation. An increase in the concentration of p-cresol to 10?3 M and in the duration preliminary UV irradiation inhibited subsequent biodegradation. Biodegradation of p-cresol was accompanied by the formation of a product with a fluorescence maximum at 365 nm (λex = 280 nm), and photodegradation yielded a compound fluorescing at 400 nm (λex = 330 nm). Sequential UV and biodegradation led to the appearance of bands in the fluorescence spectra that were ascribed to p-cresol and its photolysis products. It was shown that sequential use of biological and photochemical degradation results in degradation of not only the initial toxicant but also the metabolites formed during its biodegradation.  相似文献   

12.
Crown exposure to light (CE) and tree allometry were investigated for 11 species in a snowy cool-temperate secondary forest dominated by Fagus crenata and Betula ermanii in Japan. The 11 species differentiated horizontal and vertical light gradients for regeneration. CE was highly variable across species in small trees, but variation in CE decreased with increasing height. The 11 species were classified into three patterns of height-dependent change in CE in comparison to community-level trends, and rank reversal of CE with increasing height was not apparent. Allometric relationships between trunk diameter (D) and height (H) and between D and trunk length (L) differed little between trees of high and low CE within species. In contrast, slopes of the allometric relationships between D and H differed across species; species with larger maximum height (H max) were taller at a given D, as was noted in previous studies of warm-temperate and tropical forest trees. Differences in trunk angle among the species of different H max were the main factor generating the differences in allometric relationships between D and H in this forest. Trunk angle increased with increasing height in the species of large H max but decreased in those of small H max. Hence, allometric relationships between D and L were not related to H max. Since the species of small H max grow laterally and are easily covered in snow during winter while those of large H max grow vertically above snow cover, differences in trunk angle may reflect species mechanical properties.  相似文献   

13.
  • 1.1. Total chromophore contents as well as the contributions made by 11-cis retinal were determined by high pressure liquid chromatography in light- and dark-adapted eyes of Orchomene plebs and Glyptonotus antarcticus (Amphipoda and Isopoda, respectively).
  • 2.2. In O. plebs the highest amount of total chromophore in pmol/eye was found to be 18.5 in 36 hr dark-adapted animals. The lowest amount (11.6 pmol/eye) was recorded in 24 hr light-adapted individuals.
  • 3.3. In dark-adapted O. plebs, irrespective of whether dark-adapted for 36 or 60 hr, the percentage of 11-cis retinal was maximally 96.6%. In the light-adapted material it reached 71.2%
  • 4.4. In eyes of 20 hr dark-adapted Glyptonotous antarcticus, possibly because of insufficient dark adaptation, a total chromophore content of only 3.2 pmol/eye was found. The percentage of 11-cis retinal was 55.8.
  • 5.5. Porphyropsin with its testable 3-dehydroretinal (vitamin A2-aldehyde) was not encountered in any of our samples.
  • 6.6. Calculations of photopigment per gram body weight and a comparison with data from freshwater crayfish show that dark-adapted O. plebs possess approximately 20 times the relative photopigment amount of the crayfish. Absolute sensitivity of the eye of O. plebs is, therefore, expected to be very high.
  相似文献   

14.
The biochemical properties of Spirulina platensis in an internally illuminated photobioreactor (IlPBR) were investigated under different light-emitted diode (LED) wavelengths; blue (λmax= 450 and 460 nm), green (λmax= 525 nm), red (λmax = 630 and 660 nm), and white (6,500K), with various light intensities (200, 500, 1,000, and 2,000 μmol/m2/sec) were examined. The highest specific growth rate, maximum biomass, and phycocyanin productivity occurred under the red LEDs (0.39/day, 0.10 g/L/day, and 0.14 g/g-cell/day, respectively) at 1,000 μmol/m2/sec; the lowest growth rate was obtained under blue LEDs. Indeed, the size of trichomes was changed into short form under blue LEDs at all light intensities or all LEDs at 2,000 μmol/m2/sec for the first 2 days after inoculation, and S. platensis did not grow in the IlPBR under the dark condition. These results provide a base for different approaches for designing the pilot scale photobioreactor and developing cost-effective light sources.  相似文献   

15.

Key message

Co-segregation analysis and high-throughput genotyping using SNP, SSR, and KASP markers demonstrated genetic linkage between Ur-14 and Co-3 4 /Phg-3 loci conferring resistance to the rust, anthracnose and angular leaf spot diseases of common bean.

Abstract

Rust, anthracnose, and angular leaf spot are major diseases of common bean in the Americas and Africa. The cultivar Ouro Negro has the Ur-14 gene that confers broad spectrum resistance to rust and the gene cluster Co-3 4 /Phg-3 containing two tightly linked genes conferring resistance to anthracnose and angular leaf spot, respectively. We used co-segregation analysis and high-throughput genotyping of 179 F2:3 families from the Rudá (susceptible) × Ouro Negro (resistant) cross-phenotyped separately with races of the rust and anthracnose pathogens. The results confirmed that Ur-14 and Co-3 4 /Phg-3 cluster in Ouro Negro conferred resistance to rust and anthracnose, respectively, and that Ur-14 and the Co-3 4 /Phg-3 cluster were closely linked. Genotyping the F2:3 families, first with 5398 SNPs on the Illumina BeadChip BARCBEAN6K_3 and with 15 SSR, and eight KASP markers, specifically designed for the candidate region containing Ur-14 and Co-3 4 /Phg-3, permitted the creation of a high-resolution genetic linkage map which revealed that Ur-14 was positioned at 2.2 cM from Co-3 4 /Phg-3 on the short arm of chromosome Pv04 of the common bean genome. Five flanking SSR markers were tightly linked at 0.1 and 0.2 cM from Ur-14, and two flanking KASP markers were tightly linked at 0.1 and 0.3 cM from Co-3 4 /Phg-3. Many other SSR, SNP, and KASP markers were also linked to these genes. These markers will be useful for the development of common bean cultivars combining the important Ur-14 and Co-3 4 /Phg-3 genes conferring resistance to three of the most destructive diseases of common bean.
  相似文献   

16.

Key message

The negative association between the I - 3 gene and increased sensitivity to bacterial spot is due to linkage drag (not pleiotropy) and may be remedied by reducing the introgression size.

Abstract

Fusarium wilt is one of the most serious diseases of tomato (Solanum lycopersicum L.) throughout the world. There are three races of the pathogen (races 1, 2 and 3), and the deployment of three single, dominant resistance genes corresponding to each of these has been the primary means of controlling the disease. The I-3 gene was introgressed from S. pennellii and confers resistance to race 3. Although I-3 provides effective control, it is negatively associated with several horticultural traits, including increased sensitivity to bacterial spot disease (Xanthomonas spp.). To test the hypothesis that this association is due to linkage with unfavorable alleles rather than to pleiotropy, we used a map-based approach to develop a collection of recombinant inbred lines varying for portions of I-3 introgression. Progeny of recombinants were evaluated for bacterial spot severity in the field for three seasons, and disease severities were compared between I-3 introgression haplotypes for each recombinant. Results indicated that increased sensitivity to bacterial spot is not associated with the I-3 gene, but rather with an upstream region of the introgression. A survey of public and private inbred lines and hybrids indicates that the majority of modern I-3 germplasm contains a similarly sized introgression for which the negative association with bacterial spot likely persists. In light of this, it is expected that the development and utilization of a reduced I-3 introgression will significantly improve breeding efforts for resistance to Fusarium wilt race 3.
  相似文献   

17.
A new anti-Prelog short-chain dehydrogenase/reductase (SDR) encoding gene lcsdr was cloned from Lactobacillus composti DSM 18527, and heterologously expressed in Escherichia coli. LcSDR is nicotinamide adenine dinucleotide phosphate (NADPH)-dependent and has a molecular weight of approximately 30 kDa. The optimal pH and temperature were 6.5 and 30?°C, respectively. The maximal reaction rate Vmax was 133.9 U mg?1; the Michaelis–Menten constant K m of LcSDR were 0.345 mM for acetophenone (1a), and 0.085 mM for NADPH. Through introducing an EsGDH-catalyzed NADPH regeneration system, a biocatalytic process for (R)-1-phenylethanol ((R)-1b) was developed with outstanding time–space yield. Under the optimized conditions, 50 g l?1 1a was converted to (R)-1b in 2 h with a yield of 93.8%, enantiomeric excess of product (e.e.p) above 99% and space–time yield of 562.8 g l?1 d?1.  相似文献   

18.
To predict selenium cycling in sediments, it is crucial to identify and quantify the processes leading to selenium sequestration in sediments. More specifically, it is essential to obtain environmentally-relevant kinetic parameters for selenium reduction and information on how they spatially vary in sediments. The Salton Sea (California, USA) is an ideal model system to examine selenium processes in sediments due to its semi-enclosed conditions and increasing selenium concentration over the last century. Selenium enters the Salton Sea mainly as selenate and might be sequestered in the sediment through microbial reduction. To determine the potential selenium sequestration of Salton Sea littoral sediments and which sediment properties are controlling selenate reduction kinetics, we determined the centimeter-scale vertical distribution of potential selenate reduction rates and apparent kinetic parameters (maximum selenate reduction rates, Vmax, and selenate half-saturation concentration, Km) using flow-through reactor (FTR) experiments. We compared sediments from two littoral sites (South and North) and four depth intervals (0–2, 2–4, 4–6 and 6–8 cm). Furthermore, we characterized the selenium fractions in the sediment recovered from the FTR experiments to identify the processes leading to the sequestration of selenium. Our results reveal higher potential for selenium reduction and sequestration in the topmost sediment (0–2 cm) suggesting that microorganisms inhabiting surface sediment are well adapted to reduce selenate entering the Salton Sea. As apparent Km values (103–2144 µM) exceed the average selenium concentration in the overlying water (6–25 nM), in situ selenate reduction is limited by the low availability of selenate and the resident selenate-reducing microorganisms operate well below their Vmax (11 and 43 nmol cm?3 h?1). Selenium speciation after FTR experiments confirms the primary sequestration of reduced biomass-associated and elemental selenium (68–99% of total selenium) in the sediment. Further, the absence of correlation between the tested sediment physical (porosity, bulk density, clay content), chemical (Corg, Ntot, total selenium content) and biological characteristics (abundance of culturable selenate-reducers) with the kinetic parameters of selenate reduction indicates that these sediment characteristics cannot be used as predictors of apparent Vmax or Km. Conclusively, microbial selenate reduction is an important, if not the primary process, leading to the sequestration of reduced selenium in the Salton Sea sediments and making the surficial Salton Sea sediments an important selenium sink.  相似文献   

19.
Oxygen-responsive promoters can be useful for synthetic biology applications, however, information on their characteristics is still limited. Here, we characterized a group of heterologous microaerobic globin promoters in Escherichia coli. Globin promoters from Bacillus subtilis, Campylobacter jejuni, Deinococcus radiodurans, Streptomyces coelicolor, Salmonella typhi and Vitreoscilla stercoraria were used to express the FMN-binding fluorescent protein (FbFP), which is a non-oxygen dependent marker. FbFP fluorescence was monitored online in cultures at maximum oxygen transfer capacities (OTRmax) of 7 and 11 mmol L?1 h?1. Different FbFP fluorescence intensities were observed and the OTRmax affected the induction level and specific fluorescence emission rate (the product of the specific fluorescence intensity multiplied by the specific growth rate) of all promoters. The promoter from S. typhi displayed the highest fluorescence emission yields (the quotient of the fluorescence intensity divided by the scattered light intensity at every time-point) and rate, and together with the promoters from D. radiodurans and S. coelicolor, the highest induction ratios. These results show the potential of diverse heterologous globin promoters for oxygen-limited processes using E. coli.  相似文献   

20.
A controversy of long standing in membrane electrophysio-logy is whether the sodium ion current (INa) and potassium ion current (IK) pass through the membrane in separate channels, or through a single set of channels which conduct first INa and then IK. In support of the latter hypothesis it has been noted that the sodium conductance (gNa) decline, called inactivation, proceeds with about the same time course as the potassium conductance (gK) increase. This could mean that Na+ selective channels are being converted into K+ selective channels. The hypothesis is especially interesting because of the possibility that the carrier postulated in active transport is convertible from Na+ to K+ selectivity1. An explicit statement of the single channel hypothesis and the means for disproving it were given by Mullins2. Because a single channel could not simultaneously conduct INa and IK, disproof requires that membrane conductance (gm) be made somehow to exceed the maximum value of gNa or gK. We report here that inactivation of gNa can be destroyed fairly selectively by the action from inside the axon of the unspecific proteolytic enzymes of pronase. In many cases gm after pronase treatment is greater than maximum gK before treatment, making untenable the single channel hypothesis.  相似文献   

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