Invertébrés Sans Frontières: Large Scales of Connectivity of Selected Freshwater Species among Caribbean Islands

The freshwater fauna (crustaceans, molluscs, fish) of many tropical islands in the Caribbean and Pacific share an amphidromous life‐cycle, meaning their larvae need to develop in saline conditions before returning to freshwater as juveniles. This community dominates the freshwaters of much of the tropics, but is poorly known and at risk from development, in particular dam construction. Amphidromy can theoretically lead to dispersal between different freshwater areas, even to distant oceanic islands, via the sea. The extent and scale of this presumed dispersal, however, is largely unknown in the Caribbean. Recent genetic work in Puerto Rico has shown that many freshwater species have little or no population structure among different river catchments, implying high levels of connectivity within an island, whereas between‐island structure is unknown. We used genetic techniques to infer the geographic scales of population structure of amphidromous invertebrates (a gastropod and a number of crustacean species) between distant parts of the Caribbean, in particular Puerto Rico, Panama and Trinidad. We found virtually no geographic population structure across over 2000 km of open sea for these freshwater species. This implies that they are indeed moving between islands in sea currents as larvae, meaning that continued recruitment requires a continuum of healthy habitat from the freshwater to marine environment. We further discuss the role of amphidromy and suggest its ecological and biogeographic role may be more important than previously presumed.     

Detecting dispersal of Nuphar lutea in river corridors using microsatellite markers

1. River corridors are well-known for their role in plant dispersal. The buoyancy of seeds, the possibility of dispersal by vegetative fragments, and the frequency and efficiency of dispersal among different river catchments determine linear distribution patterns. Little is known about the relative importance of these factors to observed patterns of genetic variation.
2. One hundred and fifty-six Nuphar lutea individuals from forty-four sampling sites in the river catchments of the Cidlina River, the Mrlina River and the Labe River (Czech Republic) were studied using ten microsatellite markers. Interpretation of patterns in genetic variation allowed several conclusions about dispersal mechanisms.
3. Vegetative long-distance dispersal is probably very limited in this species. Only one multilocus genotype was found in more than one sampling site. The distance between the sites was about 75 km.
4. To explain the distribution of Bayesian based clusters of related multilocus genotypes, both along-river and inter-river long-distance dispersals have to be invoked.
5. A marginally significant tendency for higher genetic diversity in the lower part of the river Cidlina was detected. Continuous downstream dispersal of seeds by water currents could be a valid explanation.
6. Significant positive autocorrelation was found among individuals at within-river distances of up to 25 km. Repeated dispersal of seeds over distances in the range of tens of kilometers is common.     

Intraspecific phylogeography of Percina evides (Percidae: Etheostomatinae): an additional test of the Central Highlands pre-Pleistocene vicariance hypothesis

North America exhibits the most diverse freshwater fish fauna among temperate regions of the world. Species diversity is concentrated in the Central Highlands, drained by the Mississippi, Gulf Slope and Atlantic Slope river systems. Previous investigations of Central Highlands biogeography have led to conflicting hypotheses involving dispersal and vicariance to explain the diversity and distribution of the freshwater fish fauna. In this investigation predictions of the Central Highlands pre-Pleistocene vicariance hypothesis are tested with a phylogeographic analysis of the percid species Percina evides, which is widely distributed in several disjunct areas of the Central Highlands. Phylogenetic analysis of complete gene sequences of mitochondrially encoded cytochrome b recover three phylogroups, with very low levels of sequence polymorphism within groups. The two western phylogroups are monophyletic with respect to the eastern phylogroup. The recovery of two monophyletic lineages with an eastern and western distribution in the disjunct highland areas is a pattern expected from vicariance, but is not predicted by the Central Highlands pre-Pleistocene vicariance hypothesis. The recovery of very limited mitochondrial DNA polymorphism and lack of phylogeographic structuring across the entire range of the eastern clade, very shallow polymorphism between the disjunct Missouri River and upper Mississippi River populations, and lack of sequence polymorphism in the upper Mississippi River populations, support a hypothesis of dispersal during or following the Pleistocene. The present distribution of P. evides is best explained by both vicariant and dispersal events.     

Intertidal colonization rates. A matched latitude, north v. south, remote v. near shore island experiment

Colonization of artificial substrata was monitored on sheltered rocky shores at Husvik, South Georgia (54° 11'S; 36° 40'W) and Cumbrae, Scotland (55° 46'N; 4° 55'W) from mid summer to early autumn. South Georgia is a remote island (1,330 km from other land); Cumbrae is only 2 km from nearby coasts. Both islands were heavily glaciated for a period up to about 10,000 ybp, so the intertidal fauna is of geologically recent origin. The South Georgian fauna is depauperate and consists mainly of direct developers; that of Cumbrae is rich and largely larviparous. Colonization rates at Cumbrae were one to four orders of magnitude greater than at Husvik. It is suggested that the fauna of South Georgian shores stems from colonization by rafting from remote sources, while Cumbrae has been supplied predominantly by short-range pelagic larval dispersal. The measured differences in colonization rates reflect the substantial local advantage of larval dispersal over direct development in established communities.     

Fate of 2 year-old, hatchery-reared trout cod Maccullochella macquariensis (Percichthyidae) stocked into two upland rivers

Radio-tracking was used in monitoring the reintroduction of on-grown 2 year-old trout cod Maccullochella macquariensis (Percichthyidae) (a nationally endangered freshwater fish) in both a large and small upland river. Thirty-six radio-tagged M. macquariensis were stocked into a site in each of the Murrumbidgee and Cotter Rivers (Australian Capital Territory). Restricted dispersal occurred in both rivers, with both samples of M. macquariensis remaining within 5 km of the release site for the duration of the study. Mortality was rapid and 1 month after release 61 and 31% of the sample was alive in the Murrumbidgee and Cotter Rivers, respectively. In the Murrumbidgee River, complete mortality had occurred 6 months after release. An individual survived in the Cotter River until 7 months after release. Predation by cormorants Phalacrocorax spp. and predation or scavenging by the common water rat Hydromys chrysogaster were the probable causes of mortality. Predator-assisted movement of radio-tags by cormorants occurred in both groups and had the potential to confound interpretation of active dispersal movements.     

Genetic structure of Melanotaenia australis at local and regional scales in the east Kimberley, Western Australia

The Kimberley region of Western Australia possesses a poorly studied freshwater fish fauna with high endemism in an aquatic landscape subject to monsoonal floods and dry season isolation. In the first population genetic study of freshwater fish in this region, the authors tested the effects of geographic barriers on genetic structure at multiple spatial scales in east Kimberley populations of the western rainbowfish, Melanotaenia australis , the most widespread and abundant species in the region. Based on allozyme comparisons, hierarchical analysis of F _ST revealed increasing genetic subdivision with spatial scale. Minimal genetic structure within creeklines demonstrated that wet season dispersal, rather than dry season isolation, determines genetic structure at small scales. At the scale of sub-catchments, a pattern of isolation by distance along creeklines was evident. Genetic subdivision between adjacent river systems was greater between rivers separated by a plateau than by lowlands. This implies greater connectivity of populations in lowland areas and may explain the greater similarity of the east Kimberly freshwater fish fauna with lowlands to the east than with the more rugged regions to the west. Similarly, greater connectivity between lowland populations may account for the on-average larger distribution of lowland Melanotaeniids.     

Distribution pattern, threats and conservation of fish biodiversity in the East Tiaoxi, China

East Tiaoxi River is one of the largest inflowing rivers into Taihu Lake, and the fish fauna in the river is poorly understood. In the present study, an extensive survey of fish was conducted in October and November 2009, May and September 2010 and May 2011 covering a total of 55 sites along the whole river. A total of 84 freshwater fish species belonging to 8 orders, 18 families and 52 genera have been recorded. Among these are 35 species endemic to China, and 3 newly recorded exotic species. The fish composition varies greatly from headwaters to downstream. Based on cluster analysis with presence-absence data, the East Tiaoxi River is divided into four regions, specifically, the upper reach, middle-up reach, middle reach and lower reach. It is observed that species richness and the proportion of omnivorous species increased from upstream to downstream while the proportion of invertivorous species decreased consequently. Habitat alteration, overfishing, pollution and inland navigation adversely affect the fish diversity and ecosystem functioning in the East Tiaoxi River. To protect fish diversity more effectively in the area, the conservation of fish biodiversity in the North Tiaoxi River and Middle Tiaoxi River should be considered as a priority. Meanwhile, shallow zones or backwater areas should be created in the middle-lower reaches. Furthermore, river restoration, in terms of habitat creation, should be considered to protect the structure and diversity of fish communities, halt the progressive deterioration of freshwater ecosystems and sustain a valuable ecological resource for humans.     

Genetic diversity and dispersal of Phragmites australis in a small river system

Even though the reed, Phragmites australis, is an extensively studied wetland species, little is known about reproduction and dispersal modes within and among reed populations at the scale of small river systems. Using microsatellite analysis of 189 individuals from three adjacent river catchments in the Czech Republic, we elucidated the role of the river corridors in the dispersal of P. australis. Using Bayesian clustering of individuals, we found that 19% of clusters were distributed only along one river, which implied dispersal by water (or by wind) along river corridors, whereas 38% of clusters were widely distributed and were likely the product of wind long-distance dispersal among rivers. Intensive exchange of propagules among river systems is further demonstrated by only 6% of total variance being attributed to the variance among rivers in the AMOVA-analysis. Spatial autocorrelation analysis revealed a decreasing pattern up to 5–10 km and no clear pattern over longer distances. This gives an evidence for pollen and seed dispersal at short distances (up to 1 km), whereas most likely only seed dispersal at longer distances up to 10 km. We found five multilocus genotypes distributed in two different populations. The distances between populations with the same genotype ranged from 0.5 to 10.8 km. This can be interpreted as long-distance vegetative dispersal.     

The macroinvertebrates of the Cunene River from the Ruacana Falls to the river mouth and assessment of the conservation status of the river

The proposed construction of a second hydroelectric power-generating dam on the Cunene (Kunene) River on the Namibia-Angola border, more than 100km downstream of the Ruacana hydroelectric power plant, will have a major influence on the aquatic biota of this river. In order to assess the potential impact of this impoundment a more detailed inventory of the biota in the river prior to this development was needed. Unfortunately the river presently does not represent an entirely undisturbed system as the operation of the Ruacana hydroelectric power station since 1970 has had a long-term effect on its biota. In the low-flow mid-summer season in particular, large areas of the river become irregularly inundated and exposed, sometimes on a daily basis, making them unsuitable for macroinvertebrate colonisation. There are six impoundments along the Cunene River upstream of the Ruacana Falls in Angola. These, however, do not have any major disruptive effects on daily flow variation in the Cunene River in Namibia although whole system biological consequences could be considerable but are unstudied. The Cunene River has a diverse freshwater fish fauna but, prior to the surveys reported here, the aquatic macroinvertebrates had been poorly studied. Surveys conducted by staff of the Department of Water Affairs (DWA) of Namibia and the Albany Museum, Grahamstown, in 1997 and 1998 have resulted in 216 aquatic macroinvertebrate species being recorded from Ruacana to the river mouth. The lower Cunene River, flowing through a very arid region, is biogeographically isolated and therefore highly vulnerable to change. The biota recorded reflects a fauna of widespread species and several elements of tropical origin. Several undescribed species may reflect some endemics but because of limited knowledge of the tropical rivers, this cannot be ascertained with certainty. From the aspect of conservation, the river contains a diversity of species with an abundance of filter-feeding species. Further surveys conducted during different seasons will undoubtedly record more taxa.     

Variation of snail's abundance in two water bodies harboring strains of Pseudosuccinea columella resistant and susceptible to Fasciola hepatica miracidial infection, in Pinar del Río Province, Cuba

The abundance of freshwater snails in two rural sites of Pinar del Río, Cuba, which harbor Pseudosuccinea columella susceptible and resistant to miracidia of Fasciola hepatica was followed for one year. Susceptible snails were found in the most anthropic site (IPA) whereas the resistant population inhabited the most preserved one (El Azufre). Only two snail species coexisted with P. columella at IPA site (Physa cubensis and Tarebia granifera) while five species were found at El Azufre, including an endemic from that province (Hemisinus cubanianus). Populations of both resistant and susceptible snails showed stable densities throughout the year, although the susceptible strain attained higher abundance. The highest densities were observed in April-May 2004 for the susceptible population whereas the resistant strain attained its highest abundance in January 2004. No record of Fossaria cubensis was made and the thiarid T. granifera occurred only at low densities. One of the sampled sites (IPA) meets all the conditions for the first report of P. columella naturally infected with larvae of F. hepatica.     

Seasonal movement, dispersal, and home range of Northern Snakehead Channa argus (Actinopterygii, Perciformes) in the Potomac River catchment

Knowledge of the movement behaviour and dispersal ability of non-native species can aid in their management by informing risk assessments and the development of control strategies. To improve understanding of the seasonal movement and dispersal behaviour of Northern Snakehead (Channa argus), we implanted 49 fish in the Potomac River with radio tags and tracked movements from October 2006 to 2007. In addition, we tested the hypotheses that activity level, dispersal ability, and home range size varied with fish size. Home range was calculated for 24 fish. Of these, 19 exhibited stable home ranges averaging 1.2 km² in size. Thirteen fish (31% of survivors) dispersed an average distance of 18 km between 30 April and 7 June, mostly upstream (92%) and across the main river channel. Fish moved greater distances during the pre-spawn season compared to the spawning season. There was no relationship between fish length and any behavioural measure. Upstream dispersal was restricted by barriers such as dams; therefore, Northern Snakehead can likely disperse greater distances than observed here. Our observations demonstrate the invasiveness of Northern Snakehead by showing that a large portion of adults dispersed over considerable distances, suggesting spread may be rapid in large, open freshwater systems.     

In-stream and overland dispersal across a river network influences gene flow in a freshwater insect, Calopteryx splendens

Gene flow in riverine species is constrained by the dendritic (branching) structure of the river network. Spatial genetic structure (SGS) of freshwater insects is particularly influenced by catchment characteristics and land use in the surroundings of the river. Gene flow also depends on the life cycle of organisms. Aquatic larvae mainly drift downstream whereas flying adults can disperse actively overland and along watercourses. In-stream movements can generate isolation by distance (IBD) at a local scale and differentiation between subcatchments. However, these patterns can be disrupted by overland dispersal. We studied SGS across the Loire River in the damselfly Calopteryx splendens which is able to disperse along and between watercourses. Our sampling design allowed us to test for overland dispersal effects on genetic differentiation between watercourses. Amplified fragment length polymorphism markers revealed high genetic differentiation at the catchment scale but the genetic structure did not reflect the geographical structure of sampling sites. We observed IBD patterns when considering the distance following the watercourse but also the Euclidean distance, i.e. the shortest distance, between pairs of sites. Altogether, our results support the hypothesis of overland dispersal between watercourses. From a conservation perspective, attention should be paid to the actual pathways of gene flow across complex landscapes such as river networks.     

Spatial and seasonal distribution patterns of fish assemblages in the Río Champotón, southeastern Mexico

Río Champotón in the Yucatán Peninsula is within the Usumacinta Province, the most diverse in fish fauna in Mexico, and is part of the Mesoamerican hotspot, with high endemism and exceptional habitat loss. The spatial and seasonal variability of its fish fauna and their relation to physical habitat characteristics were studied, finding 53 taxa. Canonical correspondence analysis shows salinity, distance from the river mouth, and substratum type differentiate an estuarine and a freshwater region. Fish fauna replacement was observed, with taxa exclusive to each region: 26 estuarine and 27 freshwater species. Six freshwater species enter the estuarine region when the high river flow depletes salinity. Estuary showed greater seasonal differences in specific richness than the freshwater region, which have sites with higher local specific richness. Despite its small drainage, Río Champotón has a highly diverse fish fauna and some areas are affected by human activity and the hurricane season. Its conservation is of critical importance.     

新疆阿勒泰地区额尔齐斯河和乌伦古河流域鱼类多样性演变和流域健康评价

为了解阿勒泰地区额尔齐斯河和乌伦古河流域的鱼类多样性现状和历史演变, 本研究于2013-2016年间在该流域的鱼类多样性进行了连续调查, 并结合历史资料和标本, 以Margalef丰富度指数、Shannon-Wiener多样性指数、Pielou均匀度指数分析评估了流域内鱼类的多样性水平和时空变化。该流域历史上分布有土著鱼类23种, 当前记录到19种, 流域内还有外来鱼类15种。阿勒泰鱼类的区系组成以鲤科种类为主, 其中特有和珍稀濒危物种占比高, 具有重要的保护价值。多样性指数计算结果显示, 2013-2016年鱼类多样性情况整体稳定, 额尔齐斯河鱼类物种数多于乌伦古河。研究还基于鱼类生物完整性指数(Fish Index of Biological Integrity, F-IBI)对34个采集点的河流健康状况进行了评价, 结果显示额尔齐斯河流域大多数调查点的健康状况处于“亚健康”或“一般”水平, 乌伦古河流域多数调查点的健康状况处于“健康”水平。水利工程、外来物种、过度捕捞是影响阿勒泰地区鱼类多样性的重要因素。未来应通过水利工程的联合调度、下泄合理生态流量、布设鱼类通道、规范养殖渔业、严控外来物种、本地土著鱼类的人工增殖放流, 以及合理的就地保护措施对阿勒泰地区的鱼类多样性加以保护, 提升水体健康程度。     

Spatio-temporal patterns of the decline of freshwater mussels in the Little South Fork Cumberland River,USA

The Little South Fork Cumberland River, Kentucky and Tennessee, USA, was a globally important conservation refugium for freshwater mussels (Mollusca: Unionidae) because it supported an intact example (26 species) of the unique Cumberland River mussel fauna including imperiled species. We used previous surveys and our 1997–1998 survey to reconstruct the historical fauna, to describe spatio-temporal patterns of density and number of species, and to evaluate the probable sequence and cause of observed mussel declines. We were specifically interested in better understanding how mussel assemblages respond to chronic disturbances, and how these changes manifest in persistence patterns. Density and numbers of species declined steadily from 1981 to 1998, but declines occurred first in the lower river (early 1980s), followed by declines in the upper river (late 1980s to early 1990s). Of the total species recorded from the Little South Fork, 17 (65%) are seemingly extirpated and five others appear near extirpation. Declines are associated with at least two, temporally distinct major insults. Lower river declines are associated with surface mining, whereas, oil extraction activities are implicated in upper river declines. Regardless of causal factors, species persistence was primarily a function of predecline population size with only the most numerous and widespread species surviving. At this time, the river appears lost as a conservation refugium for mussels despite its remoteness, predominantly forested watershed, and several layers of existing statutory and regulatory environmental safeguards. We suggest that the river could be restored and mussels reintroduced if an interagency task force is formed to identify and mitigate specific stressors now affecting most mussel species in the river.Nomenclature: Turgeon et al. (1998).     

Longitudinal variation in the composition of the benthic macroinvertebrate fauna of a typical North coast Jamaican river

Benthic macroinvertebrate fauna plays a major role in river ecosystems, especially those of tropical islands. Since there is no information on the distribution of benthic invertebrates along a Jamaican river, we report here on the composition of the benthic fauna of the Buff Bay river, on the Northern coast of Jamaica. A total of 14 samples were collected from five sites, using kick nets and a Surber sampler, between May 1997 and October 1998. We also examined the applicability of the rhithron/potamon model, and some of the premises of the River Continuum Concept (RCC) in relation to the distribution of invertebrate taxa. The results showed a total of 38 taxa of identified invertebrates. A group of dominant taxa, composed mainly of immature stages of insects, occurred at all sites. Two notable characteristics of the river were the absence of a true potamonic fauna and the low representation of the shredder functional feeding group in the community We conclude that, while there was minor variation in the composition of the benthic macroinvertebrate fauna among the sites, this was a response to local conditions within the river system. The characteristics of the community did not conform to either of the models.     

An assessment of macroinvertebrate functional feeding groups as water quality indicators in the Buffalo River, eastern Cape Province, South Africa

The aim of this paper was to investigate the potential for using functional feeding groups (FFGs) as indicators of water quality conditions in rivers, using the Buffalo River, South Africa, as a specific example. Multivariate classification and ordination techniques were used to investigate species and FFG distributions in relation to a number of physico-chemical variables at 16 sites from the headwaters to the estuary of the Buffalo River.Two-way indicator species analysis (TWINSPAN) of species composition ranked most of the sites sequentially down the river, irrespective of water quality conditions. Ordination of FFGs from a set of riffle samples collected in mid-late summer showed only weak relationships between FFG distribution and water quality changes, except where variables changed sequentially down the river (e.g. pH and temperature). Individual species responses to water quality gradients were examined for nine riffle-dwelling species representing diverse FFGs. Following correspondence analysis of a matrix of environmental variables and species frequencies, some species showed strong associations with defined ranges of some variables. In particular, Adenophlebia auriculata (Leptophlebiidae, Ephemeroptera) from the headwater sampling site, was associated with low pH and low temperature. Simulium damnosum occurred under conditions of high turbidity, while Afronurus harrisoni was found under high concentrations of potassium, ammonium and nitrite ions.We conclude that although there was a distinct headwaters fauna in the Buffalo River, and sequential downstream changes in species composition, most FFGs (apart from shredders) were represented down the whole length of the river. FFG classifications are therefore unlikely to provide useful indications of water quality conditions in the Buffalo River.Using a categorical approach to classifying water quality variables, and by applying correspondence analysis to the resulting matrix, we recognised nine species that could be used to define water quality. These indicator species can be used to define tolerance ranges of the fauna for water quality conditions in different parts of the Buffalo river.     

Clonal diversity and spatial genetic structure of Potamogeton pectinatus in managed pond and river populations

Higher levels of genetic diversity of river macrophytes are expected in downstream parts because of potential accumulation of various genotypes from upstream sites. We assessed the clonal diversity and spatial genetic structure of fennel pondweed (Potamogeton pectinatus or Stuckenia pectinata) populations with emphasis on the estimation of dispersal via clonal propagules along a river in connection to upstream ponds. We analysed genetic diversity of 354 plant shoots sampled in 2005 and 2006 at three pond and five river sites in the Woluwe river catchment (Belgium). Nine microsatellite DNA markers revealed 88 genets of which 89% occurred in only one site. Clonal propagule dispersal was detected up to 10 km along the river. Few multilocus genotypes were repeatedly present along a major part of the river indicating vegetative spread. Populations of ponds contained a higher amount of clonal diversity, indicating the importance of local seed recruitment. A fine-scaled spatial genetic structure indicated that most seedling recruitment occurred at a distance <5 m in pond populations whereas clones in river sites were unrelated and showed no spatial autocorrelation. The clonal diversity decreased along the river from upstream to downstream due to establishment of few large clones.     

Genetic differentiation of submerged plant populations and taxa between habitats

Ceratophyllum spp., Callitriche spp., Zannichellia spp. and Potamogeton pectinatus L. are widespread submerged macrophyte species, often occurring at high abundance and forming an integral part of the vegetation of many types of shallow aquatic systems. Several species occur in both freshwater and brackish water habitats. Most have a mixed reproduction system and can reproduce sexually by seeds and propagate asexually by rhizomes, turions, root tubers or axillary tubers. It is hypothesized that sexual propagules are more important than vegetative fragments to ensure long-distance-dispersal, which in case of frequent bird or water flow-mediated dispersal should lead to lowered genetic differentiation. At a regional level, we used dominant ISSR markers in a multi-species approach and observed the largest clonal differentiation between brackish water and freshwater populations of the western European lowland (Belgium). Differentiation was pronounced at taxon level (e.g. Zannichellia), as a salinity gradient (P. pectinatus) or as a coastal-to-inland conductivity gradient (Callitriche obtusangula). These differences and trends suggested a very limited dispersal at regional level across both habitats and regions. To test the hypothesis whether vegetative reproduction and dispersal may have an important function in maintenance of the species at local scale, we investigated the microsatellite diversity and clonal distribution within and between populations of P. pectinatus from a single catchment, representing upstream forest ponds and downstream river sites along the Woluwe (Brussels, Belgium). Clonal diversity was low on average, however, with a higher number of multilocus genotypes in upstream forest ponds than in downstream river sites. A few but abundant clones were present along various stretches of the river indicating clonal spread and establishment over larger distances within the river. Clonal dispersal at a local scale was more pronounced in river than in pond habitats, indicating a higher relative importance of water flow than bird-mediated dispersal for establishment of P. pectinatus in river sites. Dispersal of seeds and establishment of seedlings were assumed more effective within ponds than in river habitats. Upstream forest ponds can be regarded as source populations and refuges of clonal diversity for recolonization of the more stressful downstream river habitat.     

Fish fauna, biogeography and conservation of freshwater fish in Poyang Lake Basin, China

A checklist of the fish of Poyang Lake Basin based on an extensive survey and literature review is presented. A total of 220 species and subspecies belonging to12 orders, 27 families and 100 genera, have been recorded. Of these, 131 species are endemic to China. Based on cluster analysis with presence-absence data, freshwater ecosystems in Jiangxi Province are divided into two regions, the Xunwushui River region and the region of Poyang Lake. The Xunwushui River flows into the Pearl River, whereas the region of Poyang Lake flows into the Yangtze River. The fish fauna and evolution of the fish fauna in Poyang Lake Basin owes much to geological events and belongs to the Oriental Region, South-east Asiatic sub-region and East China area. Anthropogenic activities including habitat alteration, overfishing, pollution and soil erosion have severely reduced the fish biodiversity in Poyang Lake Basin. River modifications (i.e. dam construction and sand excavation) and heavy metal pollution are the most significant threats to fish diversity and ecosystem functioning in the majority of the river systems in the province. To protect fish diversity and fisheries more effectively in Poyang Lake Basin, law enforcement should be strengthened, and the following measures could be introduced: restocking economically important fish species; establishing fish sanctuaries and freshwater protected areas, ordering a close season and developing sustainable aquaculture.