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1.
In this work we investigate the level of theory necessary for reproducing the non-linear variation of the 129Xe nuclear magnetic resonance (NMR) chemical shift with the density of Xe in supercritical conditions. In detail we study how the 129Xe chemical shift depends under supercritical conditions on electron correlation, relativistic and many-body effects. The latter are included using a sequential-QM/MM methodology, in which a classical MD simulation is performed first and the chemical shift is then obtained as an average of quantum calculations of 250 MD snapshots conformations carried out for Xe n clusters (n =?2 ? 8 depending on the density). The analysis of the relativistic effects is made at the level of 4-component Hartree-Fock calculations (4c-HF) and electron correlation effects are considered using second order Møller-Plesset perturbation theory (MP2). To simplify the calculations of the relativistic and electron correlation effects we adopted an additive scheme, where the calculations on the Xe n clusters are carried out at the non-relativistic Hartree-Fock (HF) level, while electron correlation and relativistic corrections are added for all the pairs of Xe atoms in the clusters. Using this approach we obtain very good agreement with the experimental data, showing that the chemical shift of 129Xe in supercritical conditions is very well described by cluster calculations at the HF level, with small contributions from relativistic and electron correlation effects.  相似文献   

2.
The neutral PrSi n (n = 12–21) species considering various spin configurations were systematically studied using PBE0 and B3LYP schemes in combination with relativistic small-core potentials (ECP28MWB) for Pr atoms and cc-pVTZ basis set for Si atoms. The total energy, growth-pattern, equilibrium geometry, relative stability, hardness, charge transfer, and magnetic moments are calculated and discussed. The results reveal that when n < 20, the ground-state structure of PrSi n evaluated to be prolate clusters. Starting from n = 20, the ground-state structures of PrSi n are evaluated to be endohedral cagelike clusters. Although the relative stabilities based on various binding energies and different functional is different from each other, the consensus is that the PrSi13, PrSi16, PrSi18, and PrSi20 are more stable than the others, especially the PrSi20. Analyses of hardness show that introducing Pr into Si n (n = 12–21) elevates the photochemical sensitivity, especially for PrSi20. Calculated result of magnetic moment and charge transfer shows that the 4f electrons of Pr in the clusters are changed, especially in endohedral structures such as PrSi20, in which one electron transfers from 4f to 5d orbital. That is, the 4f electron of Pr in the clusters participates in bonding. The way to participate in bonding is that a 4f electron transfers to 5d orbital. Although the 4f electron of Pr atom participates in bonding, the total magnetic moment of PrSi n is equal to that of isolated Pr atom. The charge always transfers from Pr atom to Si n cluster for the ground state structures of PrSin (n = 12–19), but charge transfer is reverse for n ≥ 20. The largest charge transfer for endohedral structure reveals that the bonding between Pr and Si n is ionic in nature and very strong. The fullerenelike structure of PrSi20 is the most stable among all of these clusters and can act as the building blocks for novel functional nanotubes.  相似文献   

3.
The total energies, growth patterns, equilibrium geometries, relative stabilities, hardnesses, intramolecular charge transfer, and magnetic moments of HoSi n (n?=?12–20) clusters have been reexamined theoretically using two different density functional schemes in combination with relativistic small-core Stuttgart effective core potentials (ECP28MWB) for the Ho atoms. The results show that when n?=?12–15, the most stable structures are predicted to be exohedral frameworks with a quartet ground state, but when n?=?16–20, they are predicted to be endohedral frameworks with a sextuplet ground state. These trend in stability across the clusters (gauged from their dissociation energies) was found to be approximately the same regardless of the DFT scheme used in the calculations, with HoSi13, HoSi16, HoSi18, and HoSi20 calculated to be more stable than the other clusters. The results obtained for cluster hardness indicated that doping the Ho atom into Si13 and Si16 leads to the most stable HoSi n clusters, while doping Ho into the other Si n clusters increases the photochemical sensitivity of the cluster. Analyses of intracluster charge transfer and magnetic moments revealed that charge always shifts from the Ho atom to the Si n cluster during the creation of exohedral HoSi n (n?=?12–15) structures. However, the direction of charge transfer is reversed during the creation of endohedral HoSi n (n?=?16–20) structures, which implies that Ho acts as an electron acceptor when it is encapsulated in the Si n cage. Furthermore, when the most stable exohedral HoSi n (n?=?12–15) structures are generated, the 4f electrons of Ho are virtually unchanged and barely participate in intracluster bonding. However, in the most stable endohedral HoSi n (n?=?16–20) frameworks, a 4f electron does participate in bonding. It does this by transferring to the 5d orbital, which hybridizes with the 6s and 6p orbitals and then interacts with Si valence sp orbitals. Meanwhile, the total magnetic moments of the HoSi n (n?=?16–20) clusters are considerably higher than those of HoSi n (n?=?12–15). Interestingly, the endohedral HoSi16 and HoSi20 clusters can be viewed as the most suitable building blocks for novel high-density magnetic storage nanomaterials and for novel optical and optoelectronic photosensitive nanomaterials, respectively.  相似文献   

4.
To understand the chemical behavior of uranyl complexes in water, a bis-uranyl [(phen)(UO2)(μ2–F)(F)]2 (A; phen?=?phenanthroline, μ2?=?doubly bridged) and its hydrated form A?·?(H2O)n (n?=?2, 4 and 6) were examined using scalar relativistic density functional theory. The addition of water caused the phen ligands to deviate slightly from the U22–F)2 plane, and red-shifts the U–F-terminal and U?=?O stretching vibrations. Four types of hydrogen bonds are present in the optimized hydrated A?·?(H2O)n complexes; their energies were calculated to fall within the range 4.37–6.77 kcal mol-1, comparable to the typical values of 5.0 kcal mol-1 reported for hydrogen bonds. An aqueous environment simulated by explicit and/or implicit models lowers and re-arranges the orbitals of the bis-uranyl complex.
Figure
A bis(uranyl) complex [(phen)(UO2)(μ2–F)(F)]2 (A) and its solvated form A?·?(H2O)n were examined using scalar relativistic density functional theory. Hydrogen bonds cause the phen ligand to slightly deviate from the equatorial plane of the uranyl ion, resulting in a pronounced red-shift of the U–F-terminal and U?=?O asymmetric stretching vibrations. The calculated energies fall within 4.4?–6.8 kcal/mol. Explicit and/or implicit aqueous solvation re-arranges the molecular orbitals of the complex  相似文献   

5.
Calculations performed at the ab initio level using the recently reported planar concentric π-aromatic B18H6 2+(1) [Chen Q et al. (2011) Phys Chem Chem Phys 13:20620] as a building block suggest the possible existence of a new class of B3n H m polycyclic aromatic hydroboron (PAHB) clusters—B30H8(2), B39H9 2?(3), B42H10(4/5), B48H10(6), and B72H12(7)—which appear to be the inorganic analogs of the corresponding C n H m polycyclic aromatic hydrocarbon (PAHC) molecules naphthalene C10H8, phenalenyl anion C13H9 ?, phenanthrene/anthracene C14H10, pyrene C16H10, and coronene C24H12, respectively, in a universal atomic ratio of B:C?=?3:1. Detailed canonical molecular orbital (CMO), adaptive natural density partitioning (AdNDP), and electron localization function (ELF) analyses indicate that, as they are hydrogenated fragments of a boron snub sheet [Zope RR, Baruah T (2010) Chem Phys Lett 501:193], these PAHB clusters are aromatic in nature, and exhibit the formation of islands of both σ- and π-aromaticity. The predicted ionization potentials of PAHB neutrals and electron detachment energies of small PAHB monoanions should permit them to be characterized experimentally in the future. The results obtained in this work expand the domain of planar boron-based clusters to a region well beyond B20, and experimental syntheses of these snub B3n H m clusters through partial hydrogenation of the corresponding bare B3n may open up a new area of boron chemistry parallel to that of PAHCs in carbon chemistry.
Figure
Ab initio calculations predict the existence of polycyclic aromatic hydroboron clusters as fragments of a boron snub sheet; these clusters are analogs of polycyclic aromatic hydrocarbons  相似文献   

6.
Two-exposure holographic interferometry was used to study the structure of current sheets formed in three-dimensional magnetic configurations with a singular X line in heavy noble gases (Ar, Kr, and Xe). It is found that, in the presence of a longitudinal magnetic field B Z directed along the X line, plasma sheets take on an unusual shape: they are titled and asymmetric. Their asymmetry becomes more pronounced as the mass of a plasma ion increases—a manifestation of the two-fluid properties of the plasma. The observed effects can be attributed to additional forces arising due to the interaction of the longitudinal magnetic field B Z with Hall currents excited in a plane perpendicular to the X line. A qualitative model describing plasma dynamics with allowance for the Hall effect and accounting for most of the experimentally observed effects is proposed.  相似文献   

7.
A Gram-negative, polar flagella, rod-shaped bacterium LV T was isolated from a soil sample subjected to long-term manganese pollution in Hunan Province, China. Cells grow optimally on Luria–Bertani agar medium at 30 °C in the presence of 0–5.0 % (w/v) NaCl and pH 78. 16S rRNA gene sequence analysis revealed that strain LV T belonged to the genus Pseudomonas, with sequence similarity values of 98.6, 98.2, 98.7, and 97.3 % to Pseudomonas monteilii BCRC 17520 T , Pseudomonas putida BCRC 10459 T , Pseudomonas plecoglossicida BCRC 17517 T , and Pseudomonas asplenii BCRC 17131 T , respectively. The level of DNA–DNA relatedness between the five strains was <30 %. The DNA G+C content of strain LV T is 68.8 mol%. Chemotaxonomic data revealed that the strain LVT possesses ubiquinone Q-9. The polar lipid profile of strain LV T contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, and phosphatidylethanolamine. The major cellular fatty acids present are C10:03-OH (12.33 %), C16:0 (23.99 %), summed feature 3(C16:1ω7c and/or C16:1ω6c), and summed feature 8(C18:1 ω7c and C18:1 ω6c). Based on the genotypic, chemotaxonomic and phenotypic data, strain LV T is distinguishable from related members of the genus Pseudomonas. Thus, strain LV T represents a novel species of the genus Pseudomonas, for which the name Pseudomonas hunanensis sp. nov. is proposed. The type strain is LV T (=CICC 10558T = NCCB 100446T).  相似文献   

8.
A stochastic exploration of the quantum conformational spaces in the microsolvation of divalent cations with explicit consideration of up to six solvent molecules [Mg (H 2 O) n )]2+, (n?=?3, 4, 5, 6) at the B3LYP, MP2, CCSD(T) levels is presented. We find several cases in which the formal charge in Mg2+ causes dissociation of water molecules in the first solvation shell, leaving a hydroxide ion available to interact with the central cation, the released proton being transferred to outer solvation shells in a Grotthus type mechanism; this particular finding sheds light on the capacity of Mg2+ to promote formation of hydroxide anions, a process necessary to regulate proton transfer in enzymes with exonuclease activity. Two distinct types of hydrogen bonds, scattered over a wide range of distances (1.35–2.15 Å) were identified. We find that in inner solvation shells, where hydrogen bond networks are severely disturbed, most of the interaction energies come from electrostatic and polarization+charge transfer, while in outer solvation shells the situation approximates that of pure water clusters.
Figure
Water dissociation in the first solvation shell is observed only for [Mg(H2O)n]2+ clusters. The dissociated proton is then transferred to higher solvation shells via a Grotthus type mechanism  相似文献   

9.
A systematic theoretical investigation on cobalt lithium clusters LinCo [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12] was performed with a DFT approach. The location of global minima and structural evolution were carried out using the partical swarm optimization method. Li6Co is the transition structure in going from low-coordinated structures to three-dimensional torispherical structures with a cobalt atom enclosed by lithium atoms. Maxima of ?2 E and E b for LinCo were found at n?=?3, 6, 8, 10, indicating that these clusters possess higher relative stability than their neighbors. In comparison with small clusters, n?=?1–6, the greater electron transfer from Li-2s to Co-3d within cage-like clusters LinCo (n?=?7–12) strengthens the bonding effect between Lin and Co, which is reflected in the Wiberg bond index of Co and atomic binding energy analysis. AdNDP analysis verified the presence of both Lewis bonding elements (1c–2e objects) and delocalized bonding elements (6c–2e, 9c–2e and 10c–2e bonds). It is hoped that this theoretical work will provide favorable information to help understand the influence of dopant transition metal atoms on the properties of lithium-based materials.  相似文献   

10.
A series of new silver(I) saccharinate (sac) complexes, [Ag2(sac)2(μ-dppm)H2O]·H2O (1), {[Ag2(μ-sac)2(μ-dppe)]·3H2O·CH2Cl2} n (2), [Ag2(μ-sac)2(μ-dppp)] n (3), and [Ag(sac)(μ-dppb)] n (4) [dppm is 1,1-bis(diphenylphosphino)methane, dppe is 1,2-bis(diphenylphosphino)ethane, dppp is 1,3-bis(diphenylphosphino)propane, and dppb is 1,4-bis(diphenylphosphino)butane], have been synthesized and characterized by C, H, N elemental analysis, IR spectroscopy, 1H NMR, 13C NMR, and 31P NMR spectroscopy, electrospray ionization mass spectrometry, and thermogravimetry–differential thermal analysis. Single-crystal X-ray studies show that the diphosphanes act as bridging ligands to yield a dinuclear complex (1) and one-dimensional coordination polymers (2 and 4), whereas the sac ligand adopts a μ2-N/O bridging mode in 2, and is N-coordinated in 1 and 4. The interaction of the silver(I) complexes with fish sperm DNA was investigated using UV–vis spectroscopy, fluorescence spectroscopy, and agarose gel electrophoresis. The binding studies indicate that the silver(I) complexes can interact with fish sperm DNA through intercalation, and complexes 1 and 3 have the highest binding affinity. The gel electrophoresis assay further confirms the binding of the complexes with the pBR322 plasmid DNA. The minimum inhibitory concentrations of the complexes indicate that complex 1 exhibits very high antibacterial activity against standard bacterial strains of Escherichia coli, Salmonella typhimurium, and Staphylococcus aureus, being much higher than those of AgNO3, silver sulfadiazine, ciprofloxacin, and gentamicin. Moreover, complexes 13 exhibit very high cytotoxic activity against A549 and MCF-7 cancer cell lines, compared with AgNO3 and cisplatin. The bacterial and cell growth inhibitions of the silver(I) complexes are closely related to their DNA binding affinities.  相似文献   

11.
The interaction of 1.07-μm laser radiation with plasma of a continuous optical discharge (COD) in xenon and argon at a pressure of p = 3–25 bar and temperature of T = 15 kK has been studied. The threshold power required to sustain COD is found to decrease with increasing gas pressure to P t < 30 W in xenon at p > 20 bar and to P t < 350 W in argon at p > 15 bar. This effect is explained by an increase in the coefficient of laser radiation absorption to 20?25 cm–1 in Xe and 1?2 cm–1 in Ar due to electronic transitions between the broadened excited atomic levels. The COD characteristics also depend on the laser beam refraction in plasma. This effect can be partially compensated by a tighter focusing of the laser beam. COD is applied as a broadband light source with a high spectral brightness.  相似文献   

12.
The gas phase molecular structure of a single isolated molecule of [Ag(Etnic)2NO3];1 where Etnic = Ethylnicotinate was calculated using B3LYP method. The H-bonding interaction between 1 with one (complex 2) and two (complex 3) water molecules together with the dimeric formula [Ag(Etnic)2NO3]2;4 and the tetrameric formula [Ag(Etnic)2NO3]4;5 were calculated using the same level of theory to model the effect of intermolecular interactions and molecular packing on the molecular structure of the titled complex. The H-bond dissociation energies of complexes 2 and 3 were calculated to be in the range of 12.220–14.253 and 30.106–31.055 kcal?mol?1, respectively, indicating the formation of relatively strong H-bonds between 1 and water molecules. The calculations predict bidentate nitrate ligand in the case of 1 and 2, leading to distorted tetrahedral geometry around the silver ion with longer Ag–O distances in case of 2 compared to 1, while 3 has a unidentate nitrate ligand leading to a distorted trigonal planar geometry. The packing of two [Ag(Etnic)2NO3] complex units; 4 does not affect the molecular geometry around Ag(I) ion compared to 1. In the case of 5, the two asymmetric units of the formula [Ag(Etnic)2NO3] differ in the bonding mode of the nitrate group, where the geometry around the silver ion is distorted tetrahedral in one unit and trigonal planar in the other. The calculations predicted almost no change in the charge densities at the different atomic sites except at the sites involved in the C–H?O interactions as well as at the coordinated nitrogen of the pyridine ring.
Figure
Molecular structure (left) and electrostatic potentials mapped on the electron density surface (right) calculated by DFT/B3LYP method for Etnic, and complexes 1 and 2  相似文献   

13.
A site-directed C14G mutation was introduced into the stromal PsaC subunit of Synechococcus sp. strain PCC 7002 in vivo in order to introduce an exchangeable coordination site into the terminal FB [4Fe–4S] cluster of Photosystem I (PSI). Using an engineered PSI-less strain (psaAB deletion), psaC was deleted and replaced with recombinant versions controlled by a strong promoter, and the psaAB deletion was complemented. Modified PSI accumulated at lower levels in this strain and supported slower photoautotrophic growth than wild type. As-isolated PSI complexes containing PsaCC14G showed resonances with g values of 2.038 and 2.007 characteristic of a [3Fe–4S]1+ cluster. When the PSI complexes were illuminated at 15 K, these resonances partially disappeared and two new sets of resonances appeared. The majority set had g values of 2.05, 1.95, and 1.85, characteristic of FA ?, and the minority set had g values of 2.11, 1.90, and 1.88 from FB′ in the modified site. The S?=?1/2 spin state of the latter implied the presence of a thiolate as the terminal ligand. The [3Fe–4S] clusters could be partially reconstituted with iron, producing a larger population of [4Fe–4S] clusters. Rates of flavodoxin reduction were identical in PSI complexes isolated from wild type and the PsaCC14G variant strain; this implied equivalent capacity for forward electron transfer in PSI complexes that contained [3Fe–4S] and [4Fe–4S] clusters. The development of this cyanobacterial strain is a first step toward translation of in vitro PSI-based biosolar molecular wire systems in vivo and provides new insights into the formation of Fe/S clusters.  相似文献   

14.
A bisexual multiple branching process is studied. Consider a population with respect to three genotypes in both the female and male populations and let $$X(n) = \left\langle {X_1 (n), X_2 (n), X_3 (n)} \right\rangle and Y(n) = \left\langle {Y_1 (n), Y_2 (n), Y_3 (n)} \right\rangle$$ be random vectors giving the number of females and males (respectively) of each genotype in generationn. The mating of females and males is accommodated in the model withZ ij (n) representing the number of females of theith genotype mated with a male of thejth genotype in generationn. The mating system is such that a female may be mated to only one male but a male may be mated with more than one female. By arranging the nine random variablesZ ij (n),i, j=1, 2, 3, in a 1×9, vectorZ(n) it is shown that under certain conditions there is a positive constant ? such that when ?>1 the vectorsZ n n,X n n andY n n converge almost surely asn→∞ to random vectors with fixed directions. The paper is divided into four sections. In section 1 the model is described in detail and its potential applications to population genetics are discussed. In section 2, the generating function of the transition probabilities of theZ-process are derived. Section3 is devoted to the study of the limiting behavior of the first and second moments of theZ-process, and in section4 the results of section3 are utilized to study the behavior of the random vectorsZ(n),X(n) andY(n) asn→∞.  相似文献   

15.
Results are presented from the study of the electrical and optical characteristics of a transverse RF discharge in Xe/Cl2 mixtures at pressures of p≤400 Pa. The working mixture was excited by a modulated RF discharge (f=1.76 MHz) with a transverse electrode configuration (L≤17 cm). The emission spectrum in the spectral range of 210–600 nm and the waveforms of the discharge current, discharge voltage, and plasma emission intensity were investigated. The UV emission power from the discharge was studied as a function of the pressure and composition of a Xe/Cl2 mixture. It is shown that a discharge in a xenon-chlorine mixture acts as planar excimer-halogen lamp operating in the spectral range of 220–450 nm, which contains a system of overlapping XeCl(D, B-X; B, C-A) and Cl2(D′-A′) bands. Transverse RF discharges in Xe/Cl2 mixtures can be used to create a wideband lamp with two 50-cm2 planar apertures and the low circulation rate of the working mixture.  相似文献   

16.
17.
Searching for materials and technologies of efficient CO2 capture is of the utmost importance to reduce the CO2 impact on the environment. Therefore, the (AlN)n clusters (n = 3–5) are researched using density functional theoretical calculations. The results of the optimization show that the most stable structures of (AlN)n clusters all display planar configurations at B3LYP and G3B3 methods, which are consistent with the reported results. For these planar clusters, we further systematically studied their interactions with carbon dioxide molecules to understand their adsorption behavior at the B3LYP/6–311+G(d,p) level, including geometric optimization, binding energy, bond index, and electrostatic. We found that the planar structures of (AlN)n (n = 3–5) can capture 3–5 CO2 molecules. The result indicates that (AlN)n (n = 3–5) clusters binding with CO2 is an exothermic process (the capture of every CO2 molecule on (AlN)n clusters releases at least 30 kcal mol-1 in relative free energy values). These analysis results are expected to further motivate the applications of clusters to be efficient CO2 capture materials.  相似文献   

18.
Experimental results and model concepts concerning the relation between the index K of the interelectrode gap filling with spark channels and the peak current I peak of a single-pulse submicrosecond multichannel complete sliding discharge on an alumina ceramic surface are discussed. The spatial structure of an incomplete discharge at the threshold for the surface spark breakdown of gas is considered. The experiments were performed with three gases, Ne, Ar, and Xe, at pressures of 30 and 100 kPa and opposite polarities of the discharge voltage, with two discharge chambers differing in the geometry of the discharge gap and the thickness of the ceramic plate. It is shown that, although the structure of the incomplete discharge at the threshold for spark breakdown varies from diffuse homogeneous to pronounced filamentary, the dependence \(K\left( {\sqrt[6]{{I_{peak} }}} \right)\) for a complete discharge is close to linear and can be qualitatively explained by the earlier proposed semiempirical model of the time evolution of the structure of a multichannel discharge. In particular, the estimated steepness of the dependence \(K\left( {\sqrt[6]{{I_{peak} }}} \right)\) agrees best with the experimental results when the local density of free electrons at the threshold for spark breakdown is 1016 cm?3 or higher.  相似文献   

19.
Dem’yanov  A. V.  Lo  D. 《Plasma Physics Reports》2004,30(12):1052-1060

The optical and electrical characteristics of pulsed discharges in pure Ar at pressures of up to 7 atm, at which the discharge becomes unstable, are studied in a simple experimental device with automatic preionization. The gas temperature in the discharge is estimated from the width of the recorded emission spectrum. An analytical model of the vibrational relaxation of Ar *2 (v) is used to better determine the constants of the vibrational-translational relaxation of Ar *2 (v) molecules in their collisions with Ar atoms. The zerodimensional numerical model of a pulsed discharge in Ar is modified. The experimental and calculated results are compared in detail. Good agreement is achieved between the measured and calculated time dependences of the electrode voltage and the intensity of spontaneous emission in the pressure range of 1–6 atm, as well as between the measured and calculated values of the gas temperature at pressures of 3–6 atm. Preliminary results from numerical studies of the possibility of achieving generation are discussed.

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20.
The structures, stabilities, and aromaticities of a series of (BCO) n (CH)4–n NH (n?=?0–4), (BCO) n (CH)4–n O (n?=?0–4), and (BCO) n (CH)4–n S (n?=?0–4) clusters were investigated at the B3LYP density functional level of theory. The most stable positional isomers of the individual clusters were obtained. All of the calculated CO binding energies were exothermic, suggesting that these BCO-substituted species are stable. Calculated differences in strain energy between the BCO-substituted structures and their corresponding hydrocarbon clusters were all exothermic, indicating that the BCO-substituted structures are less strained. The negative nucleus-independent chemical shift (NICS) values obtained show that these BCO-substituted clusters are aromatic compounds, in good agreement with the aromaticities of the corresponding hydrocarbon species. To aid further experimental investigations, CO-stretching frequencies were also computed.  相似文献   

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