II. Cereal disease: the interplay between resistance and pathogenicity: Inheritance of pathogenicity in Gaeumannomyces graminis var. tritici

Variation in host response of isolates of the eyespot pathogen from different sources was examined over a number of years. Pathogen types were found in intensively-cropped couch-infested cereal sites that were almost as virulent on Agropyron repens (couch) as on wheat or barley. The commonly occurring wheat (W) type isolates from couch-free cereal crops were virulent on wheat and barley but avirulent on couch. Couch (C) types were isolated not only from couch but also from wheat, barley and oat crops with couch infestation. In pathogenicity tests on rye, C. types did not differ in virulence from the more commonly occurring W types. Aegilops ventricosa was equally resistant to both types. W type isolates from wheat and barley were examined to assess differential pathogenicity on wheat and barley. Sequential cropping with single cereal crops was used to separate out possible specific types. Isolates from fourth wheat and fourth barley crops were more pathogenic on the original than on the alternative host. When comparisons were made between isolates from third and fifth consecutive wheat and barley crops only those from barley showed a preference for the original host. An experiment comparing isolates from third and seventh consecutive wheat and barley crops showed a decline in virulence from the short to the longer sequences on the alternative but not on the original host.     

Components of partial resistance to Septoria nodorum in winter wheat

Components of partial resistance to Septoria nodorum were investigated in 10 cultivars of winter wheat having similar field resistances. The components measured were infection frequency, latent period, size, shape and rate of growth of lesions, spore production and its rate of increase. Latent period was found to be lognormally distributed. Some of the components of resistance were found to be significantly different between cultivars. Cluster analysis also showed that cultivars could be distinguished on the basis of their components of resistance. Principal components analysis indicated that resistance could be broken down into four underlying factors, three of which could be readily interpreted. The measurements of the components of resistance were combined in a model, the r-index, based on Van der Plank's r. The amount of variation between cultivars cast some doubt on the predictive value of the index but all the cultivar values were well within the range bounded by two ‘synthetic’ cultivars made up of combinations of either the most resistant or the most susceptible components. It is considered that the r-index has potential in screening for field resistance. The possibility of incorporating the most resistant-type components into one cultivar is discussed. The use of cultivar mixtures containing cultivars having similar field resistances is also discussed in the light of the variability found in this study.     

Bacteria associated with Stagonospora (Septoria) nodorum increase pathogenicity of the fungus

In studies with a laboratory isolate of the fungal pathogen Stagonospora ( Septoria ) nodorum three different isolates of bacteria were closely associated with the fungus. Bacteria were also closely associated with fresh isolates of S. nodorum obtained from artificially and naturally infected field material. Although a range of bacteria was isolated, only one type of bacterium was found to be associated with each isolate of S. nodorum . In co-inoculation studies with pycnidiospores of the fungus on detached leaves, some of the bacterial isolates significantly increased the pathogenicity of the fungus, particularly Xanthomonas maltophilia , Sphingobacterium multivorum , Enterobacter agglomerans and Erwinia amylovora . Evidence is presented indicating that one of the ways that the 'helper bacteria' may assist in the establishment of infections is by the production of lipases that were not detected in germinating fungal spores.     

In vitro screening for resistance against Septoria nodorum blotch in wheat

This study was carried out to develop an in vitro test for the identification of genotypes resistant to Septoria nodorum blotch. The basis for this project was a previous study in which a crude extract of S. nodorum was used as a selective agent (Keller et al. 1994). It was possible to distinguish resistant and susceptible cultivars in an in vitro test with zygotic embryos. In our project we wanted to test whether this in vitro test can also be used to detect resistant and susceptible genotypes in early segregating populations. Specific crosses between eight winter wheat lines showing contrasting resistance reaction for S. nodorum blotch on leaves and ears were made. The resistance level of both leaf and ear was evaluated after artificial inoculation in the field for the parental lines, the F₁ progenies, as well as for segregating F₃ and F₄ populations. In addition, this plant material was tested in vitro using methods similar to those described by Keller et al. (1994), i.e. culturing immature zygotic embryos and mature seeds on selective media. A good agreement between in vitro screening and field resistance on the ear was found for the parental lines, the F₁ and F₄ generation but not for the F₃ generations. This leads to the conclusion that the in vitro screening might be integrated into wheat breeding programs. Populations showing a high susceptibility to the pathogen metabolites in vitro could be discarded. Another promising implementation for wheat breeding would be the screening of advanced breeding material or candidate partners in a crossing program for resistance on the ear. However, the in vitro screening is not precise enough to select single plants in early segregating populations. Received: 18 January 1999 / Accepted: 30 April 1999     

The relationship between the resistance of Aegilops umbellulata Zhuk. seedlings to Septoria nodorum Berk. and peroxidase isozyme pattern

The resistance of Aegilops umbellulata Zhuk. to blotch pathogen Septoria nodorum Berk. has been studied. Cytoplasmic peroxidase activity in normal seedlings could not be used for biochemical prediction of Ae. umbellulata resistance to Septoria blotch. At the same time, isoperoxidases with pI ～7.5 and infection-induced activity of anionic isoforms with pI ～3.5 were markers of the resistant Aegilops plants. Aegilops resistance to the fungus depended on the activity of cell wall peroxidases.     

A bioassay for predicting the resistance of wheat leaves to Septoria nodorum

Plants of the winter wheat cv. Bounty were inoculated with Septoria nodorum and then assayed for ergosterol. A detached leaf technique was used in which leaf segments were incubated on agar containing benzimidazole. Four levels of a conidial suspension inoculum were applied using a measured droplet technique. Ergosterol in plant extracts was measured using HPLC and its identity confirmed by co-injection with pure ergosterol as an internal standard. The extracts were also assayed by silica-gel thin layer chromatography with the sterol being visualised with rhodamine; the presence of ergosterol in the material from the two higher disease level treatments was confirmed by analysing the eluted spots in a spectrophotometer. Additional confirmation of ergosterol was obtained using gas-liquid chromatography comparing a mixture of known plant sterols with a sample from the diseased leaf tissue. The ergosterol assay was found to be very sensitive and offers a high level of reproducibility. It would therefore appear that such assays could be of value in breeding programmes when it is necessary to screen wheat cultivars for their reaction to S. nodorum or other fungal pathogens.     

Variation in Metabolite Production by Septoria nodorum Isolates Adapted to Wheat or to Barley

The production of secondary metabolites by S. nodorum strains was examined in relation to their adaptation to wheat or to barley. Eleven strains of each type previously characterized were tested for the production in culture of (-)-(3R)-mellein (ochracin), (3R)-O-metbylmellein; (-)-(3R,4R)-4-hydroxyniellein, (-)-(3R,4S)-4-hydro-xymellein, mycophenolic acid, septorine, N-methoxy-septorine, N-methoxyseptorinol, and a new compound (=UN).
Mellein was produced by every strain. Both 4-hydro-xymellein isomers were yielded by all wheat-adapted strains and six barley-adapted strains. Most of the strains produced mycophenolic acid. On the other hand the pigmentation of culture filtrates of wheat-adapted strains was pale-yellow whereas the pigmentation of barley-adapted strains was grey-blue. The productions of O-methylmellein, septorine, N-metboxyseptorine and N-methoxyseptorinol were typical for wheat-adapted strains. The detection of UN was restricted to the filtrates of barley-adapted strains. If the pigmentation of filtrates and the production of septorines, UN and O-methyl-mellein are considered the strains fell into two groups. This classification is related to the host adaptation except for one barley-adapted strain that showed characteristics of wheat-adapted strains and one wheat-adapted strain which did not produce septorines.     

Inheritance of resistance to leaf and glume blotch caused by Septoria nodorum Berk. in winter wheat

Sixteen crosses between eight winter wheat cultivars were screened for resistance to Septoria nodorum leaf and glume blotch in the F₁ and F₄ generations using artificial inoculation in the field. The F₁ of most crosses showed dominance for susceptibility on both ear and leaf. The effects of general combining ability were of similar magnitude as the effects for specific combining ability. On the basis of the phenotypic difference of the parents, no prediction was possible about the amount and the direction of genetic variance in the segregating populations. The variation observed in this study both within and among the segregating populations suggests a quantitative inheritance pattern influencing the expression of the two traits. The components of variance between F₂ families within a population were as high as (for S. nodorum blotch on the ear) or higher (for S. nodorum blotch on the leaf) than those between populations. Therefore, strong selection within a few populations may be as effective to obtain new resistant genotypes as selection in a large number of populations. In almost all crosses, progenies were found that were more resistant than the better parent. Thus transgression breeding may be a tool to breed for higher levels of resistance to S. nodorum blotch. Highly resistant genotypes were found even in combination with two susceptible parents. The genetic source for Septoria resistance is probably broader than is generally assumed and could be used to improve S. nodorum resistance by combination breeding followed by strong selection in large populations. Received: 18 January / Accepted: 30 April 1999     

The effect of the plasmon on the inheritance of resistance to Septoria nodorum Berk. in soft wheat

The genetic control of resistance to Septoria nodorum in common wheat line Transec have been investigated. There have been concluded that high level of resistance of this line is connected with the presence in its genome of partially recessive gene which is located on wheat-rye translocation T4BS.4BL-2RL or closely linked with it. Plant plasmon can have an influence on inheritance of resistance to Septoria blotch in hybrid progeny.     

Identification of molecular markers for resistance to Septoria nodorum blotch in durum wheat

The development of Septoria nodorum blotch-resistant cultivars has become a high priority objective for durum wheat breeding programs. Marker-assisted selection enables breeders to improve selection efficiency. In order to develop markers for resistance to Septoria nodorum blotch, a set of F₅ recombinant inbred lines, derived from the crosses Sceptre/3–6, Sceptre/S9–10 and Sceptre/S12–1, was developed based on the F₂-derived family method. Two RAPD markers, designated UBC521₆₅₀ and RC37₅₁₀, were detected by bulked segregant analysis and located approximately 15 and 13.1 centiMorgans (cM) from the resistance gene snbTM, respectively. A SCAR marker was also successfully developed for marker-assisted selection in breeding programs based on the sequence of the RAPD marker UBC521₆₅₀. This is the first report of DNA-based markers linked to resistance for Septoria nodorum blotch in durum wheat. Received: 8 March 2000 / Accepted: 25 June 2000     

Novel sources of resistance to Septoria nodorum blotch in the Vavilov wheat collection identified by genome-wide association studies

Key message

The fungus Parastagonospora nodorum causes Septoria nodorum blotch (SNB) of wheat. A genetically diverse wheat panel was used to dissect the complexity of SNB and identify novel sources of resistance.

Abstract

The fungus Parastagonospora nodorum is the causal agent of Septoria nodorum blotch (SNB) of wheat. The pathosystem is mediated by multiple fungal necrotrophic effector–host sensitivity gene interactions that include SnToxA–Tsn1, SnTox1–Snn1, and SnTox3–Snn3. A P. nodorum strain lacking SnToxA, SnTox1, and SnTox3 (toxa13) retained wild-type-like ability to infect some modern wheat cultivars, suggesting evidence of other effector-mediated susceptibility gene interactions or the lack of host resistance genes. To identify genomic regions harbouring such loci, we examined a panel of 295 historic wheat accessions from the N. I. Vavilov Institute of Plant Genetic Resources in Russia, which is comprised of genetically diverse landraces and breeding lines registered from 1920 to 1990. The wheat panel was subjected to effector bioassays, infection with P. nodorum wild type (SN15) and toxa13. In general, SN15 was more virulent than toxa13. Insensitivity to all three effectors contributed significantly to resistance against SN15, but not toxa13. Genome-wide association studies using phenotypes from SN15 infection detected quantitative trait loci (QTL) on chromosomes 1BS (Snn1), 2DS, 5AS, 5BS (Snn3), 3AL, 4AL, 4BS, and 7AS. For toxa13 infection, a QTL was detected on 5AS (similar to SN15), plus two additional QTL on 2DL and 7DL. Analysis of resistance phenotypes indicated that plant breeders may have inadvertently selected for effector insensitivity from 1940 onwards. We identify accessions that can be used to develop bi-parental mapping populations to characterise resistance-associated alleles for subsequent introgression into modern bread wheat to minimise the impact of SNB.

     

Antifungal compounds in winter wheat resistant and susceptible to Septoria nodorum

The content of benzoxazinone compounds in Septoria nodorum resistant and susceptible wheat cultivars fell with time, reaching an undetectable level 3–4 wk after germination. The compounds were absent from field-grown plants extracted at growth stages 2–3, 6–7, 10, 10.5 and 11. Additional antifungal compounds were detected in healthy and diseased field-grown plants of both cultivars at all growth stages, although qualitative and quantitative differences in inhibitory activity were small and their role in resistance remains open to discussion.