Principal component analysis of intraspecific responses of tartary buckwheat to UV-B radiation under field conditions

Fifteen populations of tartary buckwheat (Fagopyrum tataricum Gaertn.) occurring in habitats with different natural UV-B levels were sampled, and the plants were exposed to enhanced UV-B radiation under field conditions simulating 25% depletion of the stratospheric ozone layer. The experimental design was a 2 × 15 factorial, with two levels of UV-B radiation (ambient and enhanced UV-B radiation) and plants from 15 populations. The responses of plants in growth, morphology, productivity and in the composition of photosynthetic pigments were measured. The results demonstrated that there were significant differences among populations in responses to UV-B radiation: some populations exhibited a positive effect while others were negatively affected. The UV-B effects on plant traits were correlated with the constitutive values. A principal component analysis (PCA) was used to evaluate the overall sensitivity of responses to UV-B radiation. Our results suggest that the sensitivity of plants to UV-B radiation is not only associated with the ambient UV-B level in natural habitats but also with the relative growth rate and other factors.     

Root morphological and proteomic responses to growth restriction in maize plants supplied with sufficient N

The primary objective of this study was to better understand how root morphological alteration stimulates N uptake in maize plants after root growth restriction, by investigating the changes in length and number of lateral roots, ¹⁵NO₃⁻ influx, the expression level of the low-affinity Nitrate transporter ZmNrt1.1, and proteomic composition of primary roots. Maize seedlings were hydroponically cultured with three different types of root systems: an intact root system, embryonic roots only, or primary roots only. In spite of sufficient N supply, root growth restriction stimulated compensatory growth of remaining roots, as indicated by the increased lateral root number and root density. On the other hand, there was no significant difference in ¹⁵NO₃⁻ influx between control and primary root plants; neither in ZmNrt1.1 expression levels in primary roots of different treatments. Our data suggested that increased N uptake by maize seedlings experiencing root growth restriction is attributed to root morphological adaptation, rather than explained by the variation in N uptake activity. Eight proteins were differentially accumulated in embryonic and primary root plants compared to control plants. These differentially accumulated proteins were closely related to signal transduction and increased root growth.     

Root growth and nitrate utilization of maize cultivars under field conditions

In a 2-year field study conducted on a high fertilized Gleyic Luvisol in Stuttgart-Hohenheim significant differences among 10 maize cultivars were observed in soil nitrate depletion. The different capability of the cultivars to utilize nitrate particularly from the subsoil was positively correlated with (a) shoot N uptake at maturity, and (b) root length density (L_v) in the subsoil layers at silking. Critical root length densities for nitrate uptake were estimated by (a) calculating uptake rates per unit root length (U), (b) subsequent calculation of needed nitrate concentration in soil solution (C₁) to sustain calculated U according to the Baldwin formula, and (c) reducing measured L_v and proportionate increase of U until needed concentration equaled measured concentration. Uptake rate generally increased with soil depth. Critical root length densities for cultivar Brummi (high measured root length densities and soil nitrate depletion) at 60–90 cm depth ranged from 7 % (generative growth) to 28 % (vegetative growth) of measured L_v Measured root length density of each other cultivar was higher than critical root length density for Brummi indicating that the root system of each cultivar examined would have been able to ensure N uptake of Brummi. Positive relationships between root length density and nitrate utilization as indicated by correlation analysis therefore could not be explained by model calculations. This might be due to simplifying assumptions made in the model, which are in contrast to non-ideal uptake conditions in the field, namely irregular distribution of roots and nitrate in the soil, limited root/soil contact, and differences between root zones in uptake activity. It is concluded from the field experiment that growing of cultivars selected for high N uptake-capacity of the shoots combined with high root length densities in the subsoil may improve the utilization of a high soil nitrate supply.     

Sensitivity of US Gulf of Mexico coastal marsh vegetation to crude oil: Comparison of greenhouse and field responses

Greenhouse and field studies were conducted to evaluate the effect of crude oil on selected US Gulf of Mexico coastal marsh species. Species showed different levels of sensitivity to oiling between greenhouse and field conditions. In greenhouse studies, two crude oils were used: South Louisiana crude oil (SLC) and Arabian Medium crude oil (AMC). The majority of Spartina patens plants died within one month following oiling with little or no recovery after three months. Panicum hemitomon and Spartina alterniflora were also adversely affected by oiling under greenhouse conditions but to a lesser extent than S. patens. The SLC or AMC oiling led to biomass reductions in S. alterniflora and S. patens. The dry biomass was not affected by oiling in P. hemitomon, Sagittaria lancifolia, Typha latifolia, and Scirpus olneyi. Results showed that S. patens plants were more sensitive to SLC as compared to AMC oil. Gross CO₂-C fixation data collected in the greenhouse indicated no differences in recovery among species across oiling treatments for S. lancifolia, S. olneyi, and T. latifolia. Field studies with S. alterniflora, S. patens and S. lancifolia demonstrated initial sensitivity of these species to oiling, and recovery following oiling with SLC. Our data also showed that caution must be employed whenever results from greenhouse studies are extrapolated to predict oil impact on vegetation under field conditions. Development of any sensitivity index of plant responses to oiling should not be based on greenhouse experiments only. Field evaluations should be included which best depict plant responses to oiling. Thus, restoration measures of US Gulf of Mexico coastal marshes following oiling should rely primarily on field studies. The field research suggests that the US Gulf of Mexico coastal marsh vegetation are likely to recover from oil spills naturally without the need for remediation procedures.     

Modulated increased UV-B radiation affects crop growth and grain yield and quality of maize in the field

Current research on the effect of increased UV-B radiation on crop production has been limited to exposing plants to improbable UV-B dose or growth condition. The objective of this study was to test the effects of short-term modulated increased UV-B radiation on maize (Zea mays L.) growth, grain yield, and quality under field conditions for three years. A modulated irradiance system was used to maintain UV-B radiation at 30% above the ambient level and was applied daily between the elongation and silking stages of maize. The result indicated that increased UV-B radiation adversely affected maize growth and yield, especially on plant height when UV-B was enhanced at the elongation stage and on yield when UV-B was enhanced near the silking stage. Yield reduction that induced by enhanced UV-B radiation was associated with reductions in number of kernels per row and kernel mass. Protein content of grains was increased with enhanced UV-B radiation, but oil and starch contents were not affected. This study confirmed the sensitivity of maize to increased UV-B radiation under the field condition, and contributed to understand the full negative and positive effects of increased UV-B radiation on crop production.     

Root responses to soil physical conditions; growth dynamics from field to cell

Root growth in the field is often slowed by a combination of soil physical stresses, including mechanical impedance, water stress, and oxygen deficiency. The stresses operating may vary continually, depending on the location of the root in the soil profile, the prevailing soil water conditions, and the degree to which the soil has been compacted. The dynamics of root growth responses are considered in this paper, together with the cellular responses that underlie them. Certain root responses facilitate elongation in hard soil, for example, increased sloughing of border cells and exudation from the root cap decreases friction; and thickening of the root relieves stress in front of the root apex and decreases buckling. Whole root systems may also grow preferentially in loose versus dense soil, but this response depends on genotype and the spatial arrangement of loose and compact soil with respect to the main root axes. Decreased root elongation is often accompanied by a decrease in both cell flux and axial cell extension, and recent computer-based models are increasing our understanding of these processes. In the case of mechanical impedance, large changes in cell shape occur, giving rise to shorter fatter cells. There is still uncertainty about many aspects of this response, including the changes in cell walls that control axial versus radial extension, and the degree to which the epidermis, cortex, and stele control root elongation. Optical flow techniques enable tracking of root surfaces with time to yield estimates of two-dimensional velocity fields. It is demonstrated that these techniques can be applied successfully to time-lapse sequences of confocal microscope images of living roots, in order to determine velocity fields and strain rates of groups of cells. In combination with new molecular approaches this provides a promising way of investigating and modelling the mechanisms controlling growth perturbations in response to environmental stresses.     

Impact of pre-sowing magnetic field exposure of seeds to stationary magnetic field on growth, reactive oxygen species and photosynthesis of maize under field conditions

Impact of pre-sowing exposure of seeds to static magnetic field were studied on 1 month old maize [Zea mays _. var: HQPM.1] plants under field conditions. Pre-standardized magnetic field strength of 100 mT (2 h) and 200 mT (1 h), which were proven best for improving different seedling parameters under laboratory condition, were used for this study. Magnetic field treatment altered growth, superoxide radical level, antioxidant enzymes and photosynthesis. Among the different growth parameters, leaf area and root length were the most enhanced parameters (78–40%, respectively), over untreated plants. Electron paramagnetic resonance spectroscopy study showed that superoxide radical was reduced and hydroxyl radical was unaffected after magnetic field treatment. With decrease in free radical content, antioxidant enzymes like superoxide dismutase and peroxidase were also reduced by 43 and 23%, respectively, in plants that emerged from magnetically treated seeds. Measurement of Chlorophyll a fluorescence by plant efficiency analyzer showed that the potential of processing light energy through photosynthetic machinery was enhanced by magnetic field treatment. Performance index of the plant enhanced up to two-fold and phenomenological leaf model showed more active reaction centers after magnetic field treatment. Among the two field strengths used, 200 mT (1 h) was more effective in altering all these parameters. It is concluded that pre-sowing magnetic field treatment can be effectively used for improving plant growth and development under field conditions.     

Liver tumors in wild flatfish: a histopathological, proteomic, and metabolomic study

Fish play host to viral, bacterial, and parasitic diseases in addition to non-infectious conditions such as cancer. The National Marine Monitoring Programme (NMMP) provides information to the U.K. Government on the health status of marine fish stocks. An aspect of this work relates to the presence of tumors and other pathologies in the liver of the offshore sentinel flatfish species, dab (Limanda limanda). Using internationally agreed quality assurance criteria, tumors and pre-tumors are diagnosed using histopathology. The current study has expanded upon this work by integrating these traditional diagnostic approaches with ones utilizing modern technologies for analysis of proteomic and metabolomic profiles of selected lesions. We have applied SELDI and FT-ICR technologies (for proteomic and metabolomic analyses, respectively) to tumor and non-tumor samples resected from the liver of dab. This combined approach has demonstrated how these technologies are able to identify protein and metabolite profiles that are specific to liver tumors. Using histopathology to classify "analysis groups" is key to the success of such an approach since it allows for elimination of spurious samples (e.g., those containing parasite infections) that may confuse interpretation of "omic" data. As such, the pathology laboratory plays a central role in collating information relating to particular specimens and in establishing sampling groups relative to specific diagnostic questions. In this study, we present pilot data, which illustrates that proteomics and metabolomics can be used to discriminate fish liver tumors and suggest future directions for work of this type.     

Growth and yield responses of cowpea and maize to inoculation withGlomus mosseae in sterilized soil under field conditions

Summary The effects of inoculation of cowpea and maize withGlomus mosseae and sowing into field soil fumigated with formalin are reported. Root infection was significantly, though temporarily, decreased and grain yield increased, by sterilization. Inoculation increased root infection, shoot yields, P contents and grain yield. IITA Journal Series Paper No. 205.     

Biological control and plant growth promoting capacity of rhizobacteria on pepper under greenhouse and field conditions

Plant growth promoting rhizobacteria Ochrobactrum lupini KUDC1013 and Novosphingobium pentaromativorans KUDC1065 isolated from Dokdo Island, S. Korea are capable of eliciting induced systemic resistance (ISR) in pepper against bacterial spot disease. The present study aimed to determine whether plant growth-promoting rhizobacteria (PGPR) strains including strain KUDC1013, strain KUDC1065, and Paenibacillus polymyxa E681 either singly or in combinations were evaluated to have the capacity for potential biological control and plant growth promotion effect in the field trials. Under greenhouse conditions, the induced systemic resistance (ISR) effect of treatment with strains KUDC1013 and KUDC1065 differed according to pepper growth stages. Drenching of 3-week-old pepper seedlings with the KUDC-1013 strain significantly reduced the disease symptoms. In contrast, treatment with the KUDC1065 strain significantly protected 5-week-old pepper seedlings. Under field conditions, peppers treated with PGPR mixtures containing E681 and KUDC1013, either in a two-way combination, were showed greater effect on plant growth than those treated with an individual treatment. Collectively, the application of mixtures of PGPR strains on pepper might be considered as a potential biological control under greenhouse and field conditions.     

Comparison of responses of bean, pea and rape plants to UV-B radiation in darkness and in light

Effect of UV-B radiation on leaves of bean, pea and rape plants was studied. UV-B radiation (11.2 kJ·m⁻²) induced more distinct reduction of the primary photosynthesis activity when applied in darkness than the same UV-B dose, extended in time, and applied with photosynthetic active radiation (PAR). The pea plants were more susceptible to UV-B in darkness, but in the presence of PAR their tolerance was higher. The CO₂ fixation in the bean and rape plants, exposed to UV-B was decreased, but for the pea plants it remained unchanged. The UV-B irradiation caused an increase in the content of ultraviolet-absorbing pigments. Additionally, the bean plants grown at UV-B increased the thickness of leaves, described as SLW.