Characteristics of the membranes of the pellicle of the ciliatePseudomicrothorax dubius

Summary The membranes of the pellicle of the ciliatePseudomicrothorax dubius are investigated using thin section electron microscopy and freeze-fracture replicas. The plasma membrane is covered by a surface coat and is connected to the outer alveolar membrane by short, sometimes branched, bridges. The inner alveolar membrane is coated on both sides. The epiplasm lies in intimate contact with the cytoplasmic surface of this membrane, and there is a corresponding deposit on the other surface. This deposit is regularly striated.The epiplasmic layer and the alveoli are interrupted at sites of cytotic activity,e.g., the attachment sites of trichocysts, the cytoproct, and the parasomal sacs. The striated deposit ends where the epiplasm ends, indicating a direct relationship between these two epimembranous layers.There is a deposit along the sides of the first part of the tip of the trichocysts, and in this region the trichocyst membrane is free of intramembranous particles.The membrane of the parasomal sacs has a coat on both surfaces. That on the extraplasmic surface is similar to the surface coat of the plasma membrane. The origin of the cytoplasmic coat is unknown. The cytotic activity of these sacs is indicated by their highly irregular profiles.     

Theoretical study of the optimal shape of the front profile of the lens in the eye of the scallop,Pecten

The optimal shape of the front profile of the thick lens in the eye of the scallop,Pecten is theoretically, geometric optically investigated as a function of the refractive index of the lens and the retina, as well as of the geometrical parameters of the eye. The shape of the theoretical front surfaces is compared with that of the real, experimentally determined front face of the lens. The degree of correction of the lens for spherical aberration of the reflecting spherical mirror in thePecten eye is examined. The optimal shape of the front profile of the lens depends strongly on a set of parameters, such that a certain fine tuning is required among them to assure a full correction for spherical aberration. The extreme variability of the eye parameters and the shape of the front face of the lens in the scallop is inconsistent with this fine tuning requirement. The degree of correction of thePecten lens for spherical aberration might not be as good as it could be, a possible biooptical reason for which is discussed.     

On the neurodynamics of the creation of consciousness

Consciousness is expected to have a specific temporal dynamics. The COrollary Discharge of Attention Movement (CODAM) model of consciousness is deduced from an engineering approach to attention and motor attention. This model is briefly described, as is support arising from brain dynamics, especially that for the attentional blink. The understanding of known temporal dynamics in the brain associated with the emergence of consciousness is then developed from CODAM, and specifically related to the N2 ERP brain signal. How the pre-reflective self, as content-free, interacts with the content of experience is discussed in terms of the possibility that such experience arises from some proto-self generated by body signals; experiments are described which indicate that no pre-reflective self based on body signals is observable. Only a content-free pre-reflective self is consistent with this data, as CODAM suggests. How such a pre-reflective self can be further fused to give temporal continuity of a sense of self is considered in terms of various mechanisms which could be present for preserving the sense of self. The observation of the N2 signal in hippocampal encoding is proposed as providing a justification for the encoding of the N2–P3 sequence of brain signals. This would correspond to episodic encoding of the sequence of experiences of the pre-reflective self; this will thereby provide the necessary control signals in time so that ‘I’ is experienced as part of the retrieval of such memories.     

On the nature of the horny scales of the pangolin

The pangolin scale is a horny derivative of the epidermis. It is complex in structure and is divisible into three distinct regions. The dorsal plate forms approximately one-sixth of the scale thickness. It is composed of flattened solid keratinized cells without basophilic nuclear remnants. This region tends to fray easily. The dorsal plate contains bound phospholipids and sulphydryl groups but is weak in disulphide bonds.
The bulk of the scale is made up of the intermediate plate formed of less flattened cells without basophilic nuclei. This region is rich in disulphide bonds but contains no appreciable bound phospholipids or sulphydryl groups.
The ventral plate is only a few cells thick and is rich in bound phospholipids, which also occur in the underlying scale bed epidermis.
These three regions of the scale are formed from separate epidermal germinal areas which do not develop a granular layer. Keratohyalin granules are, however, formed in the epidermis between the scales.
It is suggested on the basis of histological structure and dishribution of chemical constituents that pangolin scales are probably homologous with primate nails.
Evidence against the views that they are homologous with reptilian scales or are derived from compressed hairs is presented.     

Estimation of the size of the vCJD epidemic

Estimates of the final size of the variant Creuzfeldt-Jakob Disease epidemic have been made by fitting theoretical curves of the incubation period distribution to the histogram of observed annual deaths to 2002, using various assumptions of the mean and standard deviation of this distribution, and also of the efficacy of the Specified Bovine Offals ban of 1989. Unless the mean incubation time is greater than 15 to 20 years the estimates lie in the low hundreds to about a thousand, and the most likely situation, of a mean between 11 and 15 years, gives estimates of about 150 to 500 deaths. Numbers above a few thousands would only occur if the mean incubation period is of the order of 25 to 30 years and reasons are adduced to indicate this is very unlikely. These numbers are not greatly increased if the ban was poorly observed. This method of analysis may be applicable to other situations where a cause that is limited in space and time is expected to have late effects.     

On the origin of the genetic code and the stability of the translation apparatus

An “error theory” is developed which can be applied to determine the stability of a macromolecular translation machinery which reproduces itself. It is shown that the overall effects of a multitude of possible error versions of macromolecules can be treated statistically, and that such a statistical approach is of considerable usefulness in the theoretical treatment of complex macromolecular systems. The theory is developed within the context of a detailed treatment of the “frozen accident” hypothesis for the origin of the genetic code. A model is described which permits some thermodynamic characterization of the components involved in the code nucleation. The model also proves useful in resolving a stability “paradox” described by Orgel, which relates to the translation stability in present-day organisms and mechanisms of ageing. It indicates that any experimentally found decrease in translation accuracy with age is probably not due to an inherent instability in the translation apparatus. Relevant experiments are suggested.     

On the diversity of the Cladocera in the tropics

The mythical concept of an impoverished tropical cladoceran fauna is refuted. On a planetary scale, around half of the cladoceran species presently known occur exclusively in the tropics-subtropics, often with considerable restriction to particular geographical subzones. On a regional (political) scale, the situation is often unclear because of the continued fragmentary nature of studies, and because political units are not a good basis for biogeographical comparisons. At the finest level of resolution (lake-perlake comparisons), there appears to be an upper limit of c. 50 cladoceran species per individual lake. No significant difference between lakes in the temperate zone and in the tropics could be established here. Daphnia is largely absent from the tropics, but is replaced by more Sidids, Moinids, and Bosminids, such that the average cladoceran community in the limnetic zone of a tropical lake is not characterized by less species but rather by lower population densities. This, in turn, is considered a consequence of higher prevalent predation levels in the tropics.     

Ultrastructure of the salivary bladder of the nine-banded armadillo

Summary The nine-banded armadillo possesses a salivary bladder which is a dilated portion of the main duct of the submandibular gland at its origin. The wall of the bladder is composed of an epithelium, a submucosa and a thick coat of skeletal muscle. The ultrastructure of the epithelium reveals that it is complex and consists of three cell types: 1) principal cells, 2) light cells, and 3) basal cells. The general organization of the epithelium suggests that it is a transporting type of epithelium such as that found in the amphibian and reptilian urinary bladders and the mammalian gall bladder. The submucosa is composed primarily of densely-packed collagen fibers. The skeletal muscle is very vascular and richly innervated.This study was supported in part by a research grant from U.S.P.H.S. (GRS 5-S01-RR-05705)The authors wish to acknowledge the technical assistance of Elizabeth Underwood     

The variances of the distributions of the combinations of the sexes within mammalian litters: Notes to mark the centenary of the problem

It is 100 years since Gini noted that in some samples of litters of mice and rabbits, the variances of the distributions of the combinations of the sexes are sub-binomial. In other words, in contrast with binomial expectation, there are too many litters in which the sexes are equally balanced, and there are too few unisexual litters. In the intervening years, this finding has been replicated in a number of further species, but no explanation has become established. Potential explanations are reviewed here, and it is suggested that the most likely cause is that, at the time of formation of the zygotes, p, the probability that a zygote will be male, varies from one zygote to another within litters, thus constituting an example of Poisson variation. And it is a standard result in probability theory that such variation causes sub-binomial variance.     

Study on the morphology of the gall-bladder of the goat

200 gall-bladders of goat were studied for histology and histochemistry. The lining epithelium is tall columnar with striated border. The glands are mucous and serous, and the secretion of both surface and glands is a polyssaccharide-protein complex. The regional differences at neck, body and fundus of the gall-bladder are described. Few enterochromaffin cells with granules, which are PAS-positive and contain 5-hydroxytryptamine, are encountered at the wedge between the granular epithelial cells and the cells lining the crypts. The relationship between these cells and lymphocytic infiltration is discussed. The thick circular muscle layer at the neck region is considered a sphincter of the gall-bladder.     

Characterization of the guanidinobenzoatase in the epididymal fluids of the mouse

Guanidinobenzoatase (GB), a proteolytic enzyme found in the epididymal fluids of mice, was purified to apparent homogeneity by molecular sieving and affinity chromatography. It has a molecular mass of 71 kDa and its enzymatic activity is heat labile and sensitive to EGTA. Its kinetic parameters (Km of 6.66 μM and a Vmax of 4.38 nmol/min/mg) were determined using 4-methylumbelliferyl-p-guanidinobenzoate (MUGB) as the substrate. GB activity is concentrated in the cauda epididymal region of the genital tract. Heat-solubilized whole zonae, biologically active ZP3, and several serine proteinase inhibitors, including a proteinase inhibitor endogenous to the male genital tract, effectively block the ability of GB to hydrolyze MUGB. Pretreating cumulus-free, zonae intact oocytes with purified GB reduces, in a concentration-dependent manner, the number of sperm able to bind to the zonae. The function of the soluble enzyme is not known. Its ability to bind both trypsin inhibitors and ZP3 suggests a possible role in gamete recognition. Mol. Reprod. Dev. 47:204–209, 1997. © 1997 Wiley-Liss, Inc.     

Contributions of the surface of the root tip to the growth of Zea roots in soil

The development of the epidermal layer of roots of Zea is traced from the quiescent centre to the zone where root hairs develop. In the zone of cell division a three layered coat forms on the outside of the epidermal cells consisting of the outer epidermal walls, overlaid by a two-layered pellicle composed of a thick fibrillar inner layer of polysaccharide, and a thin fibrillar outer layer of protein. The epidermal cells divide several times in the same longitudinal file but rarely across a radius to give a new longitudinal file. Thus, the radial walls become much thicker than all but the original transverse walls, and packets of up to 32 daughter cells derived from a single initial may be distinguished. The pellicle develops during these divisions as a continuum over the outer walls of the daughter cells. It is proposed that the pellicle provides a stiffening to the forward end of the root which permits it to penetrate soil without bending. Support for this hypothesis is shown by the Zea mays mutant Ageotropic in which the pellicle is absent, the epidermal surface is disorganized, and which grows crookedly through soil. In the zone of extension growth of normal roots of two Zea species the pellicle thins and disappears. Circumferential strips of the pellicle were peeled off the young epidermal cells and could be stretched to twice their length. This deformation is partly the result of the pellicle stretching and breaking above the attachments of the radial walls. After normal thinning of the pellicle, detachment of the radial walls at their outer ends produces a corrugated surface in the proximal zone of the root tips. In dicotyledons (e.g., soybean), there is no similar pellicle, but a stiff root tip is produced by a long multi-layered root cap, the proximal portion of which covers the elongating epidermal surface.     

Unusual structure of the biliary system in the liver of the grass carp and the silver carp

It is known that the bile canaliculus in the liver of almost all vertebrates is made up of membranes of two or more adjacent liver cells. Studying the liver cell ultrastructure of lasting and fed grass carp and silver carp, it was demonstrated that a bile canaliculus is formed by deep invagination of a cell membrane of one hepatocyte. The membrane forms microvilli along the bile canaliculus. The bile canaliculus is seen in the centre of liver cell cytoplasm on the cross section and stretches from the centre of the liver cell cytoplasm to the cell membrane on the longitudinal section. The bile canaliculus is connected with a small duct cell, which is distinct from a liver cell in its small size, little amount of cell organelles and the presence of cytoplasmic filaments. The terminal part of the biliary tract consists of one liver cell and one bile duct cell. The part of the tract adjacent to the terminal one is composed of two or three small bile duct cells devoid of basal membrane. Thus, the liver parenchyma is constituted of a net of numerous bile ducts. In the portal tract, there is a large bile duct, consisting of 12-13 bile duct cells, surrounded by basal membrane and connective tissue cells.     

On the mechanisms of the effect of imino acids on the physical characteristics of collagens

The effect of imino acids on thermodynamic characteristics of the collagen-type structures in collagens from different sources is analyzed. It is demonstrated that the main mechanism of the entropy increase in the system water-protein with an increase in the imino acid content in a polypeptide chain is a change in the number of cooperative regions, detectable during the melting of a fibrous macromolecule. The variation of physical characteristics of the cooperative units determines, in particular, the variation of the hydrogen bond parameters, which appears as a broadening of the bands of NH valence vibrations and the half-widths of transitions in postdenaturation structures. Thus, the main mechanism of how imino acids act on the thermodynamic characteristics of collagens is connected with a complex nature of the denaturation process, when any substitutions of imino acids for amino acids significantly change the dehydration-hydration of the native and denatured states.     

Exploring the origin of the ion selectivity of the KcsA potassium channel

The availability of structural information about biological ion channels provides an opportunity to gain a detailed understanding of the control of ion selectivity by biological systems. However, accomplishing this task by computer simulation approaches is very challenging. First, although the activation barriers for ion transport can be evaluated by microscopic simulations, it is hard to obtain accurate results by such approaches. Second, the selectivity is related to the actual ion current and not directly to the individual activation barriers. Thus, it is essential to simulate the ion currents and this cannot be accomplished at present by microscopic MD approaches. In order to address this challenge, we developed and refined an approach capable of evaluating ion current while still reflecting the realistic features of the given channel. Our method involves generation of semimacroscopic free energy surfaces for the channel/ions system and Brownian dynamics (BD) simulations of the corresponding ion current. In contrast to most alternative macroscopic models, our approach is able to reproduce the difference between the free energy surfaces of different ions and thus to address the selectivity problem. Our method is used in a study of the selectivity of the KcsA channel toward the K+ and Na+ ions. The BD simulations with the calculated free energy profiles produce an appreciable selectivity. To the best of our knowledge, this is the first time that the trend in the selectivity in the ion current is produced by a computer simulation approach. Nevertheless, the calculated selectivity is still smaller than its experimental estimate. Recognizing that the calculated profiles are not perfect, we examine how changes in these profiles can account for the observed selectivity. It is found that the origin of the selectivity is more complex than generally assumed. The observed selectivity can be reproduced by increasing the barrier at the exit and the entrance of the selectivity filter, but the necessary changes in the barrier approach the limit of the error in the PDLD/S-LRA calculations. Other options that can increase the selectivity are also considered, including the difference between the Na+...Na+ and K+...K+ interaction. However, this interesting effect does not appear to lead to a major difference in selectivity since the Na+ ions at the limit of strong interaction tend to move in a less concerted way than the K+ ions. Changes in the relative binding energies at the different binding sites are also not so effective in changing the selectivity. Finally, it is pointed out that using the calculated profiles as a starting point and forcing the model to satisfy different experimentally based constraints, should eventually provide more detailed understanding of the different complex factors involved in ion selectivity of biological channels.     

The early development of the tail and the transformation of the shape of the nucleus of the spermatid of the domestic fowl,Gallus gallus

Summary The differentiation of the spermatid, especially in reference to the formation of the flagellum, and transformation of the shape of the nucleus was investigated in the domestic fowl.In the early stage of the spermatid, a prominent Golgi apparatus appears around the centrioles. The Golgi vesicles then surround the axial-filament complex which develops from the distal centriole. These vesicles fuse to form continuous membrane at the earliest stage of flagellar formation, and in the succeeding stage Golgi lamellae are attached to the plasma membrane of the developing flagellum. From these observations, it is assumed that Golgi apparatus may be a source of the membrane system of the flagellum.The microtubules distributed around the nucleus form the circular manchette. The anterior region of the nucleus with the manchette is cylindrical in shape and the posterior region without it remains irregular in shape. When the circular manchette has been completed, the whole nucleus acquires a slender cylindrical shape. The circular manchette then changes into the longitudinal manchette. The nuclei of spermatids without a longitudinal manchette are abnormal in shape. In view of these observations it is assumed that the nuclear shaping of the spermatid may be accomplished by circular manchette and the maintenance of shape of the elongated nucleus by longitudinal manchette.The authors wish to thank Mr. Takayuki Mori for his helpful suggestions and technical advices     

Evaluation of the role of the adaptive result in the theory of the functional systems

The fundamental of the theory of the functional systems, i.e., the concept of the useful adaptive result as a universal system-forming factor is considered. It is suggested that the adaptive result is not system-forming in behaviors actualized exclusively due to activity of systems developed earlier. It is argued that positive mutations may serve as the system-forming factor for hereditary determined behavioral forms. In all other cases of goal-directed behavior (except conditioning) the aim of performance as a model of the future result plays the decisive role. Only in conditioning the classical concept of the system-forming role of the adaptive result seems to be undeniable. The refined ideas about the mechanisms of formation of the functional systems may be useful in analysis of a number of animal and human functions (learning, emotional stress, neuroses, etc.).     

Separation of the pineal vesicle from the wall of the third ventricle during the post-hatching development of the chicken

Summary According to light- and electron-microscopic observations the pineal organ of the 3-day-old chicken consists of a prominent end vesicle and a tapering parenchymal stalk. During this stage the pineal lumen is in open communication with the third ventricle. However, in the 40-day-old chicken, which still possesses a well-developed end vesicle, the proximal portion of the pineal stalk displays regressive changes leading to local fragmentation. At this stage the pineal stalk is reduced, and the pineal lumen is missing. In 1-year-old chickens the parenchyma of the proximal portion of the stalk is further diminished, and in 3-year-old domestic fowl is completely displaced by bundles of collagenous fibers, only some nerve fibers being present. This post-hatching pineal development may reflect the sequence of changes leading from pineal sense organs to pineal glands.This work was supported by a grant-in-aid for Scientific Research from the Ministry of Education, Science and Culture of Japan     

Review of the taxonomy of the Calanidae (Copepoda) and the limits to the genus Calanus

Conflicting systems of classifying the Calanidae (Brodsky, 1972; Bradford & Jillett, 1974) are analysed and a preferred system recommended. Brodsky's system, based on characters with assumed adaptive and functional significance is rejected as is his claim to have produced a phylogenetic scheme. Bradford & Jillett's system, based on a variety of characters, results in a coherent classification which aims to be neutral concerning phylogenetic relationships among genera. Species of Calanoides, Calanus, Nannocalanus, and Neocalanus are surveyed and the need for further taxonomic work is assessed.     

The evolution of the Brachycytheride Ostracoda in the context of the breakup of Pangea

The ostracode Family Brachycytheridae is one of the most common taxa of Late Cretaceous shallow marine microfossils, and occurs in the marginal basins of Africa, Madagascar, the Middle East, South and North America and the Caribbean region. Their migration pathways were controlled largely by the plate tectonic events associated with the breakup of Pangea and the formation of the North and South Atlantic Oceans, the Caribbean Sea and the Gulf of Mexico. This study is an attempt to combine specific information on the plate tectonic events as evidenced by the timings of continental-scale structural movements, sea level dynamics (largely the product of mantle processes), the creation and destruction of migration pathways, and taxonomy of the group, and thus relate deep-seated Earth processes, surficial expression of these movements, and biological evolution. Although the Late Cretaceous Brachycytheridae are very widely distributed, their use for correlation has been hampered due to their conservative external morphology, with all of them having a posteriorly-sloped dorsal margin and a swollen ventrolateral carapace, and all of them were long assigned to a single genus, Brachycythere. In 2002, Puckett defined a new genus, Acuminobrachycythere, based on a distinctive clade of North American brachycytherids. It was also recognized at that time that the members of the family from Gondwana (mainly Africa and South America) were distinct in having a single (unsplit) second adductor muscle scar, whereas all of those from North America had a split second adductor. This tiny difference holds significant paleogeographic—and presumably evolutionary—information. Two new genera are therefore described herein, Sapucariella, which is restricted to Gondwana, and Tricostabrachycythere, which is an early, short-lived genus that occurred around the margins of Gondwana. Three new species are described and one is re-described. In all, there are six genera in the Family Brachycytheridae, which include Acuminobrachycythere, Brachycythere, Kaesleria (which is restricted to the Middle East), Opimocythere (which evolved in the Paleogene of North America and is the last of the Brachycytheridae), Sapucariella and Tricostabrachycythere. Taxonomic information is presented for 85 species, including new images of many of the type specimens. A summary of the breakup of Pangea is also presented, with precise paleogeographic reconstructions based on global magnetic anomalies.