Phylogenetic relationships of Early–Middle Ordovician ostracods of Baltoscandia

Phylogenetic analysis of the Early and early Middle Ordovician (Tremadoc and Arenig) ostracod species of Baltoscandia suggests a polyphyletic origin for the suborder Beyrichiocopa. Binodicopes, leiocopes and eridostracans are excluded from the beyrichiocopide clade. An independent origin from the basal ostracods is suggested for the binodicopes and eridostracans. The palaeocopes form a strongly supported monophyletic clade. Within this suborder, the ctenonotellid and the tetradellid families together form a monophyletic clade. The tetradellids are paraphyletic, being a stem-group for the ctenonotellids. Nanopsis nanella , the earliest known ostracod from the Tremadoc, is a basal palaeocope. The early eridostracans Conchoprimitia and Incisua , with their uncomplicated carapace morphology, might be the most primitive ostracods.     

低等六足动物系统学研究进展

低等六足动物包括原尾纲、弹尾纲和双尾纲三个类群,是探讨六足动物起源和进化问题的关键类群,近十年来成为节肢动物系统进化研究中的焦点之一。低等六足动物的系统发育地位以及它们之间的关系一直是备受争论的问题。通过介绍三类低等六足动物最新的分类系统,从经典分类学和系统发育两个方面对低等六足动物近十年来的研究进展进行了综述。迄今,对于三类低等六足动物都建立了比较完备的分类体系,原尾纲划分为3目10科,弹尾纲划分为4目30科,双尾纲划分为2亚目3总科10科。系统发育研究中,大多数的系统发育分析结果不支持传统的缺尾类假说,缺尾纲应摒弃不用。分子数据分析的结果普遍支持原尾纲与双尾纲近缘,但仍需要进一步探讨。线粒体基因组、比较胚胎学和比较精子学的研究结果表明,原尾纲可能经历了长期的趋异进化历史。最近的比较精子学研究支持了双尾纲的单系性。总之,三类低等六足动物系统学研究均取得了长足的发展,但仍然存在诸如研究人员匮乏和研究水平不均衡等问题。系统发育研究中,分子系统学研究成为关注的焦点,而基于核基因和线粒体基因的数据分别建立的系统发育假说存在分歧,亟需开发更优的数据分析方法。此外,需加强低等六足动物比较形态学、比较胚胎学、发育生物学等方面的研究,以便将来进行全证据的系统发育研究。     

Higher-level classification of the Archaea: evolution of methanogenesis and methanogens

We used a phylogenetic approach to analyze the evolution of methanogenesis and methanogens. We show that 23 vertically transmitted ribosomal proteins do not support the monophyly of methanogens, and propose instead that there are two distantly related groups of extant archaea that produce methane, which we have named Class I and Class II. Based on this finding, we subsequently investigated the uniqueness of the origin of methanogenesis by studying both the enzymes of methanogenesis and the proteins that synthesize its specific coenzymes. We conclude that hydrogenotrophic methanogenesis appeared only once during evolution. Genes involved in the seven central steps of the methanogenic reduction of carbon dioxide (CO(2)) are ubiquitous in methanogens and share a common history. This suggests that, although extant methanogens produce methane from various substrates (CO(2), formate, acetate, methylated C-1 compounds), these archaea have a core of conserved enzymes that have undergone little evolutionary change. Furthermore, this core of methanogenesis enzymes seems to originate (as a whole) from the last ancestor of all methanogens and does not appear to have been horizontally transmitted to other organisms or between members of Class I and Class II. The observation of a unique and ancestral form of methanogenesis suggests that it was preserved in two independent lineages, with some instances of specialization or added metabolic flexibility. It was likely lost in the Halobacteriales, Thermoplasmatales and Archaeoglobales. Given that fossil evidence for methanogenesis dates back 2.8 billion years, a unique origin of this process makes the methanogenic archaea a very ancient taxon.     

Apigenin and amentoflavone glycosides in the psilotaceae and their phylogenetic significance

Documentation of amentoflavone O-glucosides as the predominant flavonoid glycosides in both genera of the Psilotaceae clearly distinguishes this family from all other families of vascular plants. Psilotum and Tmesipteris also possess apigenin C- and O-glycosides as common flavonoid types. Apigenin 7-O-rhamnoglucoside occurs in both genera and the previously undocumented apigenin 7-O-rhamnoglucoside-4′-O-glucoside, although identified only in Tmesipteris, may also be present in Psilotum. The existence of flavone C-glycosides in both genera may provide a phytochemical relationship between the Psilotaceae and some ferns. The phylogenetic significance of these results is discussed.     

基部藓类分子系统学研究

基部藓类是稳定地处于藓类系统发育树基部的类群.它包括7纲,2亚纲,10目,10科,34属,637种.基部藓类虽然只占藓类种类的5％,但由于其内部各类群孢子体形态极为丰富,因此对于理解整个藓类植物的系统发育具有重要意义.通过对48个种(36个藓类、4个维管植物、2个角苔、4个苔类和2个藻类)的9个DNA片段(NU:26S,18S; MT:nad5,cox1; CP:rbcL,rps4,cp-LSU,cp-SSU,atpB)进行分子系统学分析,综合最大似然法(maximum likelihood)、最大简约法(most parsimony)和贝叶斯分析(Bayesian inference)方法的建树结果,理清了前人研究中存在冲突的类群之间的关系并为已确定的关系提供了更高的支持率.研究结果如下:(1)藻苔纲和泥炭藓纲互为姐妹类群,处于整个藓类的最基部;(2)黑藓纲与黑真藓纲互为姐妹类群(3)长台藓纲和具齿藓类组成单系;(4)四齿藓纲是所有具齿藓类的基部类群;(5)烟杆藓亚纲处于真藓纲的最基部,其次是短颈藓亚纲.以上结论在分子系统树上得到了很高的支持率.     

木霉菌及其系统分类学研究回顾

从木霉菌(Trichodermaspp.)的分类历史、主要分类系统、分子生物学在木霉菌分类研究中的应用、我国木霉菌分类研究状况等几个方面,对木霉菌的分类研究进展进行了简要回顾。近些年来国际上对木霉菌的分类研究取得了显著进展,陆续发表了许多新种,目前木霉属已报道有3组60种和2个变型。另外,对木霉分类研究中存在的问题也进行了讨论。     

鸡油菌属研究概述

鸡油菌属(Cantharellus)真菌种类众多、分布广泛,是一类重要的食药用菌资源,具有较高的经济、药用和科研价值.本文回顾了鸡油菌属真菌资源与分类学、系统发育研究的主要历程,概述了其化学成分与药理药化、生态习性和人工栽培等方面的研究现状,指出了研究过程中出现的分类混乱、重名异名等问题,展望了亚洲和非洲地区资源挖掘的...     

湖南益阳早、中奥陶世的叶笔石属（Phyllograptus）

报道湖南益阳早、中奥陶世的叶笔石1属5种,包括Phyllograptus anna Hall,1865,Phyllograptus anna longus Ruedemann,1947,Phyllograptus anna ultimus Ruedemann,1904,Phyllograptus claviger Monsen,1937,Phyllograptus claviger acuminatus(Chen and Xia),1979。研究表明,该属主要产出于弗洛晚期至大坪中期,在早、中奥陶世笔石多样性演变事件第一阶段的后期(Corymbograptus deflexus带),叶笔石所代表的上攀伸展类型就已萌芽,且在第二阶段(Pseudophyllograptus angustifolius elongatus带—Isograptus victoriae divergens带)于均分笔石动物群中占据优势地位,对该动物群内部类群的演替起着承前启后的作用,同时也验证了笔石动物群自身的演替对于其多样性演变具有重要影响。     

链霉菌分类方法学研究近展

链霉菌是重要的资源微生物 ,由于具有重要的商业及学术价值而被广泛研究。但链霉菌属内的分类关系仍未能很好解决。主要介绍了当前链霉菌的分类方法研究状况 ,强调了运用基因型和表型相结合多相分类方法对链霉菌进行分类的重要性。     

头束霉属及其近似属真菌的分类研究进展

头束霉属(Cephalotrichum Link)真菌分布广泛,具重要的经济学及生态学意义。文中简要介绍了该类群真菌的分类历史,总结了该属的分类研究进展;对中国已经发现的头束霉属真菌进行详细列表,并与近似属进行了相关比较。     

网衣属3个中国新记录种

该研究以采集于中国新疆地区的网衣科网衣属地衣标本为试验材料,采用形态解剖学、地衣化学物质检测方法和系统发育学方法,观察分析网衣属地衣的形态解剖特征、次生代谢产物以及核糖体DNA内转录间隔区(internal transcribed spacer,ITS)系统发育树,依据形态解剖数据、次生代谢产物种类以及系统发育树分类地位更为综合的鉴定种。结果显示：(1)共鉴定出网衣科网衣属3个中国新记录种——暗色网衣(Lecidea fuscoatrina Hertel & Leuckert)、珠光网衣(Lecidea perlatolica Hertel & Leuckert)和多器网衣(Lecidea polypycnidophora U. Rupr. & Türk),并提供了3个新记录的形态解剖图。(2)ITS系统发育树结果表明,暗色网衣与近缘种Lecidea atrobrunnea原种及亚种、Lecidea fuscoatra、珠光网衣与近缘种Lecidea promiscens以及Lecidea polypycnidophora与近缘种Lecidea andersonii各形成一个分支,依据分支组成可将形态差异不明显的近缘种鉴别开。     

黑茶砖茶中两种产生“金花”的曲霉菌

"金花"是曲霉属Aspergillus真菌在黑茶后发酵过程中,在砖茶内部形成的黄色闭囊壳。从广西和湖南产的黑茶砖茶中分离获得2株"金花菌",均能在培养基上形成闭囊壳。根据分离菌株的培养特征和微观形态特征及β-微管蛋白基因(Ben A)、钙调蛋白基因(Ca M)及RNA聚合酶Ⅱ基因(RPB2)的系统发育分析,参照Hubka最新的曲霉属曲霉组Aspergillus section Aspergillus分类系统,将分离菌株分别鉴定为假灰绿曲霉A.pseudoglaucus及冠突曲霉A.cristatus。另外,通过扫描电镜对这2株"金花菌"进行了形态观察,并记录了菌株A672闭囊壳的发育过程。在广西产砖茶中分离鉴定出的"金花菌"假灰绿曲霉为国内首次报道。通过比较,将过去湖南产砖茶中广泛报道的"金花菌"冠突散囊菌修订为冠突曲霉A.cristatus。黑茶茶砖中"金花菌"的分离与鉴定对于黑茶品种的鉴别和质量评价具有重要指导意义。