Range expansion due to urbanization: Increased food resources attract Grey‐headed Flying‐foxes (Pteropus poliocephalus) to Melbourne

Abstract Urbanization profoundly alters the biota of areas that become cities and towns. Many species are introduced by humans while indigenous species often decline. Although these changes are well known, the long‐term ecological effects of new species and their interactions are seldom considered and rarely documented. This study examines changes in diversity and temporal availability of the food resources of Pteropus poliocephalus (Grey‐headed Flying‐fox) in the Melbourne region using a variety of historical and current data sources. Our results indicate that urbanization has influenced the distribution, abundance and ecology of P. poliocephalus through a dramatic increase in the quantity and temporal availability of food resources. Prior to European settlement, only 13 species recorded in the range‐wide diet of P. poliocephalus grew in the Melbourne area. Compilations of street‐tree databases indicate that an additional 87 species have been planted on Melbourne’s streets and that there are at least 315 500 trees that are able to provide food for P. poliocephalus. Phenology records indicate that street trees have lengthened the temporal availability of food for P. poliocephalus. A period of natural food scarcity between May and August has been ameliorated by street trees which have provided nectar and a previously absent fruit resource. These changes are likely to be a major factor contributing to the recent range expansion of P. poliocephalus and the establishment of a permanent camp in Melbourne.     

A mapping technique to evaluate age‐0 salmon habitat response from restoration

To combat decades of anthropogenic degradation, restoration programs seek to improve ecological conditions through habitat enhancement. Rapid assessments of condition are needed to support adaptive management programs and improve the understanding of restoration effects at a range of spatial and temporal scales. Previous attempts to evaluate restoration practices on large river systems have been hampered by assessment tools that are irreproducible or metrics without clear connections to population responses. We modified a demonstration flow assessment approach to assess the realized changes in habitat quantity and quality attributable to restoration effects. We evaluated the technique's ability to predict anadromous salmonid habitat and survey reproducibility on the Trinity River in northern California. Fish preference clearly aligned with a priori designations of habitat quality: the odds of observing rearing Chinook or coho salmon within high‐quality habitats ranged between 10 and 16 times greater than low qualities, and in all cases the highest counts were associated with highest quality habitat. In addition, the technique proved to be reproducible with “substantial” to “almost perfect” agreement of results from independent crews, a considerable improvement over a previous demonstration flow assessment. These results support the use of the technique for assessing changes in habitat from restoration efforts and for informing adaptive management decisions.     

Long‐distance geneflow and habitat specificity of the rock‐dwelling coppertail skink,Ctenotus taeniolatus

Rock boulders or ‘bush‐rocks’ provide essential habitat for many organisms and there has been interest in rehabilitating areas denuded of rock with artificial substitutes. We examine whether the density and size of bush rock influences the density of the coppertail skink (Ctenotus taeniolatus). The success of habitat rehabilitation is contingent on dispersal of rock‐dwelling organisms into areas that have been remediated. To gauge the likelihood of this we characterize geneflow of coppertail skinks among discrete patches of rocky habitat associated with ridge tops. We genotyped 154 individuals from seven localities at six microsatellite DNA loci and from a subset of these individuals we obtained sequence data from the mitochondrial ND4 region. Our field survey established that lizard density was positively associated with the availability of suitably sized bush‐rock (P < 0.001), highlighting the importance of maintaining this habitat element, or replacing it where it has been lost. Despite the presence of habitat features that might be presumed as barriers to dispersal for coppertail skinks, such as intervening gullies and dense vegetation, our genetic data demonstrated high levels of geneflow among rocky ridge tops. Levels of partitioning estimated by global F_ST were significant but low for both microsatellite (F_ST = 0.020) and mitochondrial data (F_ST = 0.113). Spatial autocorrelation of genotypic similarity supports our conclusion of regular longer‐distance geneflow, and we infer lower levels of dispersal in juveniles than in adults. This study suggests that dispersal of coppertail skinks can be sufficient to naturally colonize areas of restored habitat.     

On‐farm habitat restoration counters biotic homogenization in intensively managed agriculture

To slow the rate of global species loss, it is imperative to understand how to restore and maintain native biodiversity in agricultural landscapes. Currently, agriculture is associated with lower spatial heterogeneity and turnover in community composition (β‐diversity). While some techniques are known to enhance α‐diversity, it is unclear whether habitat restoration can re‐establish β‐diversity. Using a long‐term pollinator dataset, comprising ～9,800 specimens collected from the intensively managed agricultural landscape of the Central Valley of California, we show that on‐farm habitat restoration in the form of native plant ‘hedgerows’, when replicated across a landscape, can boost β‐diversity by approximately 14% relative to unrestored field margins, to levels similar to some natural communities. Hedgerows restore β‐diversity by promoting the assembly of phenotypically diverse communities. Intensively managed agriculture imposes a strong ecological filter that negatively affects several important dimensions of community trait diversity, distribution, and uniqueness. However, by helping to restore phenotypically diverse pollinator communities, small‐scale restorations such as hedgerows provide a valuable tool for conserving biodiversity and promoting ecosystem services.     

Allee效应对具有生境恢复的集合种群的影响

Allee效应与种群的灭绝密切相关,其研究对生态保护和管理至关重要。Allee效应对物种续存是潜在的干扰因素,濒危物种更容易受其影响,可能会增加生存于生境破碎化斑块的濒危物种的死亡风险,因此研究Allee效应对种群的动态和续存的影响是必要的。从包含由生物有机体对环境的修复产生的Allee效应的集合种群模型出发,引入由其他机制形成的Allee效应,建立了常微分动力系统模型和基于网格模型的元胞自动机模型。通过理论分析和计算机模拟表明:(1)强Allee效应不利于具有生境恢复的集合种群的续存;(2)生境恢复有利于种群续存;(3)局部扩散影响了集合种群的空间结构、动态行为和稳定性,生境斑块之间的局部作用将会减缓或消除集合种群的Allee效应,有利于集合种群的续存。     

‘Branching’ with complex coarse woody debris reduces herbivory on recovering erosion scalds

Coarse woody debris (CWD) has many benefits in restoration, including protecting seedlings from herbivory, and it is often reintroduced where CWD is depauperate. At Calperum Station on the Murray River floodplain, artificially applied CWD (‘branching’) is being trialled to restore erosion scalds. At two erosion scalds, we applied 900 m² of branching and created a 900 m² branching‐free control. We predicted that branching would protect seedlings from browsing by mammalian herbivores. We planted Nitre Goosefoot (Chenopodium nitrariaceum) seedlings in each treatment and measured the number of terminal ends affected by herbivory and plant height for 8 weeks. Branching reduced the number of terminal ends affected by herbivory by ~80% and plant height loss by ~60%. Remote cameras detected some browsing by kangaroos, the most abundant herbivores on the Calperum floodplain, although cameras were too few to directly observe much of the browsing that occurred. We did not detect an effect of site browsing pressure on overall herbivory or the effectiveness of the branching. Despite the small sample size, our results suggest that branching can effectively reduce herbivory. It is likely that the effectiveness of branching in reducing herbivory is conditional on a range of factors, such as browsing pressure (i.e. scat density), so a large‐scale trial is required to clarify the role branching has on reducing herbivory in relation to these complex interactions.     

Meta‐analysis of anthropogenic habitat disturbance effects on animal‐mediated seed dispersal

Anthropogenic habitat disturbance is a strong biodiversity change driver that compromises not only the species persistence but also the ecological interactions in which they are involved. Even though seed dispersal is a key interaction involved in the recruitment of many tree species and in consequence critical for biodiversity maintenance, studies assessing the effect of different anthropogenic disturbance drivers on this interaction have not been performed under a meta‐analytical framework. We assessed the way habitat fragmentation and degradation processes affect species diversity (abundance and species richness) and interaction rates (i.e., fruit removal and visitation rates) of different groups of seed‐disperser species at a global scale. We obtained 163 case studies from 37 articles. Results indicate that habitat degradation had a negative effect on seed‐disperser animal diversity, whereas habitat fragmentation had a negative effect on interaction rates. Birds and insects were more sensitive in terms of their diversity, whereas mammals showed a negative effect on interaction rates. Regarding habitat, both fragmentation and degradation had a negative effect on seed‐disperser animal diversity only in temperate habitats, and negative effects on interaction rates in tropical and temperate habitats. Our results indicate that the impact of human disturbance on seed‐disperser species and interactions is not homogeneous. On the contrary, the magnitude of effects seems to be dependent on the type of disturbance, taxonomic group under assessment, and geographical region where the human impact occurs.     

Invertebrates and restoration: Interview with Jonathan Majer

Entomologist Jonathan Majer is a world pioneer in using ants as indicators of restoration success. With hundreds of published works to his name (and five species of ants named after him), he reflects in this interview on his undimming passion for learning and teaching about invertebrates – a group of animals that can include up to 95% of faunal species in a reference community.     

Habitat preferences and habitat restoration options for small‐bodied and juvenile fish species in the northern Murray–Darling Basin

Degradation of instream habitats in the northern Murray–Darling Basin has occurred through numerous stressors, including siltation, clearing of bankside vegetation, intrusion of livestock and impacts of pest species. A better understanding of habitat preferences of native fish species could help guide future instream habitat restoration actions. The habitat choices of seven native fish species, juvenile Murray Cod (Maccullochella peelii), juvenile Golden Perch (Macquaria ambigua ambigua), juvenile Silver Perch (Bidyanus bidyanus), adult Murray–Darling Rainbowfish (Melanotaenia fluviatilis), adult Olive Perchlet (Ambassis agassizii), adult Un‐specked Hardyhead (Craterocephalus stercusmuscarum fulvus) and adult carp gudgeons (Hypseleotris spp.) were tested in preference troughs to help inform potential habitat restoration actions in the Condamine catchment. Each species was given a choice between pair combinations of open sandy habitat, submerged macrophytes, emergent plants and rocky rubble. Habitat preferences varied between species. Murray Cod, Golden Perch, carp gudgeons and Olive Perchlets preferred structure over open sandy habitat, whilst juvenile Silver Perch, Un‐specked Hardyhead and Murray–Darling Rainbowfish did not avoid open sandy habitats. Juvenile Murray Cod preferred rocky rubble habitat over all other habitat choices. Use of complex rock piles to provide nursery habitat for Murray Cod populations is a potential restoration option. Introduction of rock could also benefit Golden Perch and carp gudgeons. Use of emergent plants, submerged macrophytes and rocky rubble for habitat restoration all appear to have merit for one or more species of small‐bodied fishes or juvenile stages of larger sized fishes. Rocky rubble or floating attached macrophytes could be viable restoration options in areas too turbid to establish submerged macrophytes. These habitat interventions would complement existing actions such as re‐snagging and provision of fish passage to assist with sustainable management of native fish populations.     

Nest box revealed habitat preferences of arboreal mammals in box‐ironbark forest

Habitat preferences need to be understood if species are to be adequately managed or conserved. Habitat preferences are presumed to reflect requirements for food, shelter and breeding, as well as interactions with predators and competitors. However, one or more of these requirements may dominate. Tree‐cavity‐dependent wildlife species are one example where shelter or breeding site requirements may dominate. We installed 120 nest boxes across 40 sites to target the vulnerable Brush‐tailed Phascogale (Phascogale tapoatafa) and the non‐threatened Sugar Glider (Petaurus breviceps). The provision of shelter sites where few of quality are available may enable better resolution of habitat preferences. Over three years, we observed the Brush‐tailed Phascogale at 17 sites, whereas the Sugar Glider was observed at 39 sites. We tested four broad hypotheses (H1–H4) relating to habitat that may influence occupancy by these species. There was no influence of hollow (cavity) abundance (H1) on either species suggesting our nest boxes had satisfied their shelter requirements. There was no influence of habitat structure (canopy and tree proximity) (H2) immediately around the nest box trees. We found no influence of distance to the forest edge (H3). Variables at and away from the nest box site that appear to reflect foraging substrates (H4) were influential on the Brush‐tailed Phascogale. Sugar Glider occupancy was only influenced by a single variable at the nest box site. The lack of influence of any other variables is consistent with the very high occupancy observed, suggesting most of the forest habitat is suitable when shelter sites are available. We found no evidence that the Sugar Glider reduced site use by the Brush‐tailed Phascogale.     

Influence of within‐patch habitat quality on high‐Andean Polylepis bird abundance

Habitat restoration strategies for fragmented high Andean forest landscapes must consider the influence of within‐patch habitat quality on bird abundance. I examined vegetation and bird abundance at three locations within a highly fragmented Polylepis forest landscape in the Cordillera Vilcanota, southern Peru. Across the landscape, there was significant variation in the vegetation structure of Polylepis forest patches of different size categories, especially in terms of tree girth, tree height, tree density, and canopy vegetation structure. Principal Component Analysis extracted five factors of habitat quality, which together accounted for 74.2% of the variability within 15 habitat variables. Polylepis bird species differed in their responses to habitat quality but, overall, variation in Polylepis bird abundance was not fully captured by the range of habitat quality variables. Tall, dense vegetation cover was clearly important for 11 conservation‐important species, a high density of large trees was important for 10 species and primary forest ground cover was important for eight species. Habitat quality exhibited no significant influence on the abundance of only one species –Asthenes urubambensis. The abundance of seven species was associated with lower elevation forest, but only one species was associated with higher elevation forest. Management of habitat quality in large and medium remnant forest patches throughout the Cordillera Vilcanota, particularly in the 3800–4200 m elevation range, will be a cornerstone in ensuring the persistence of the majority of conservation‐important bird species populations.     

Local habitat restoration in streams: Constraints on the effectiveness of restoration for stream biota

Summary   The restoration of physical habitat has emerged as a key activity for managers charged with reversing the damage done by humans to streams and rivers, and there has been a great expenditure of time, money and other resources on habitat restoration projects. Most restoration projects appear to assume that the creation of habitat is the key to restoring the biota ('the field of dreams hypothesis'). However, in many streams where new habitat is clearly required if populations and communities are to be restored, there may be numerous other factors that cause the expected link between habitat and biotic restoration to break down. We discuss five issues that are likely to have a direct bearing on the success, or perceived success of local habitat restoration projects in streams: (i) barriers to colonization, (ii) temporal shifts in habitat use, (iii) introduced species, (iv) long-term and large-scale processes, and (v) inappropriate scales of restoration. The purpose of the study was primarily to alert ecologists and managers involved in stream habitat restoration to the potential impacts of these issues on restoration success. Furthermore, the study highlights the opportunities provided by habitat restoration for learning how the factors we discuss affect populations, communities and ecosystems.     

Softening the agricultural matrix: a novel agri‐environment scheme that balances habitat restoration and livestock grazing

The loss and degradation of woody vegetation in the agricultural matrix represents a key threat to biodiversity. Strategies for habitat restoration in these landscapes should maximize the biodiversity benefit for each dollar spent in order to achieve the greatest conservation outcomes with scarce funding. To be effective at scale, such strategies also need to account for the opportunity cost of restoration to the farmer. Here, we critique the Whole‐of‐Paddock Rehabilitation program, a novel agri‐environment scheme which seeks to provide a cost‐effective strategy for balancing habitat restoration and livestock grazing. The scheme involves the revegetation of large (minimum 10 ha) fields, designed to maximize biodiversity benefits and minimize costs while allowing for continued agricultural production. The objectives and design of the scheme are outlined, biodiversity and production benefits are discussed, and we contrast its cost‐effectiveness with alternative habitat restoration strategies. Our analysis indicates that this scheme achieves greater restoration outcomes at approximately half the cost of windbreak‐style plantings, the prevailing planting configuration in southeastern Australia, largely due to a focus on larger fields, and the avoidance of fencing costs through the use of existing farm configuration and infrastructure. This emphasis on cost‐effectiveness, the offsetting of opportunity costs through incentive payments, and the use of a planting design that seeks to maximize biodiversity benefits while achieving production benefits to the farmer, has the potential to achieve conservation in productive parts of the agricultural landscape that have traditionally been “off limits” to conservation.     

Predicting the distribution of a suitable habitat for the white stork in Southern Sweden: identifying priority areas for reintroduction and habitat restoration

The loss of wetlands and semi-natural grasslands throughout much of Europe has led to a historic decline of species associated with these habitats. The reinstatement of these habitats, however, requires spatially explicit predictions of the most suitable sites for restoration, to maximize the ecological benefit per unit effort. One species that demonstrates such declines is the white stork Ciconia ciconia , and the restoration of habitat for this flagship species is likely to benefit a suite of other wetland and grassland biota. Storks are also being reintroduced into southern Sweden and elsewhere, and the a priori identification of suitable sites for reintroduction will greatly improve the success of such programmes. Here a simple predictive habitat-use model was developed, where only a small but reliable presence-only dataset was available. The model is based on the extent and relative soil moisture of semi-natural pastures, the extent of wetlands and the extent of hayfields in southern Sweden. Here the model was used to predict the current extent of stork habitat that is suitable for successful breeding, and the extent of habitat that would become suitable with moderate habitat restoration. The habitat model identifies all 10 occupied nesting sites where breeding is currently successful. It also identifies ∼300 km² of habitat that is predicted to be suitable stork habitat, but that is presently unused; these sites were identified as potential areas for stork reintroduction. The model also identifies over 100 areas where moderate habitat restoration is predicted to have a disproportionate effect (relative to the restoration effort) on the area of suitable habitat for storks; these sites were identified as priorities for habitat restoration. By identifying areas for reintroduction and restoration, such habitat suitability models have the potential to maximize the effectiveness of such conservation programmes.     

On the edge: habitat restoration priorities for three critically endangered bird species on Sangihe,Indonesia

Remnant forests on the small Wallacean island of Sangihe north of Sulawesi hold the entire ranges of more critically endangered (CR) bird species than any other comparable area on earth. We develop habitat association models for three of these CR species to identify critical habitat features as well as areas where habitat falls slightly short of suitability, and to determine whether another area of forest away from the largest block might be suitable as an insurance site for a translocated population. Hopes for all three species appear almost totally pinned to forest within a 13 km² area of the Sahendaruman crater, with virtually no near-suitable habitat away from this site. There is, however, little overlap in habitats between one CR species and the other two: cerulean flycatcher Eutrichomyias rowleyi is associated with mature streamside forest with full canopy cover, lianas, and mid-level growth, while Sangihe whistler Coracornis sanghirensis and Sangihe golden bulbul Hypsipetes platenae are restricted to ridgetop forest with full canopy cover and large trees. We pinpoint small areas (around 5 km²) of forest in the crater that are already suitable or can be made so with habitat management, and these are absolute priorities for conservation action. We show how habitat characteristics identified within models might be enhanced, and how features, especially certain tree species, can be used as indicators of future habitat improvement.     

Small‐scale field experiments provide important insights to restore the rock habitat of Australia's most endangered snake

Habitat disturbance poses a major threat to biodiversity worldwide. The broad‐headed snake (Hoplocephalus bungaroides) has become Australia's most endangered snake due to a dependence on rock habitats that are subject to high rates of human‐induced degradation. The permanence of degradation can only be reversed by outcrop restoration. We constructed experimental outcrops near (<150 m) and far (>500 m) from roads and walking trails (access points). We tested two hypotheses over a 14‐year period: that outcrop restoration can restore habitat quality, and that the frequency of outcrop degradation is influenced by distance from access points. We confirmed that habitat value was restored: lizard prey of the broad‐headed snake was more abundant in constructed compared to natural outcrops; broad‐headed snakes were detected equally in constructed and natural outcrops. Disturbance to constructed outcrops occurred more often and was more severe at near compared to far outcrops. The probability of occupancy by broad‐headed snakes was 0.75 ± 0.13 in 29 far outcrops compared to 0.41 ± 0.11 in 35 near outcrops, suggesting a response to disturbance and more frequent poaching at near outcrops. Habitat restoration for the broad‐headed snake should have its greatest value at locations far from access points. Restricting access should be a principal strategy to manage rock outcrop ecosystems. Outcrop disturbance is not unique to Australia. These findings have relevance to management of rock outcrops worldwide. Habitat restoration is an expensive conservation tool for endangered species, particularly if unsuccessful. Small‐scale restoration experiments that aim to refine procedures should precede large‐scale restoration.     

Landscape context affects the success of habitat restoration: large‐scale colonization patterns of saproxylic and fire‐associated species in boreal forests

Aim Restoration of habitats may be used as a conservation tool when ecosystems have lost their natural structure, dynamics or functioning over large areas. Controlled and planned use of fire could be an effective way to restore habitats of many threatened species in boreal forests where fire suppression has been effective. We asked whether the large‐scale landscape context affects the occurrence of rare and threatened species in forest habitats that have been burned to restore their fire‐related structures. Location Boreal forests in southern Finland. Methods We designed a large‐scale field experiment that included nine Pinus sylvestris forests (5–10 ha each) in southern Finland. Sites were located in two regions: (1) in eastern region with shorter management history and (2) in western region where intensive forestry has continued longer. We evaluated whether restoration of dead/burned wood is beneficial for rare and conservation‐dependent species and measured the recovery of pyrophilous and red‐listed insects (beetles and flatbugs) in burned forests, using standardized sampling effort. Altogether, 956 individuals of 29 red‐listed and pyrophilous species were sampled. Results Rare species colonized areas quickly, but there was a clear difference in species richness between the regions. The eastern forests harboured higher species richness after restoration. In these sites, the average species richness was 13.7 species per site, whereas in western forests it was 5.0 species per site. Similar pattern was also observed in subgroups: the corresponding numbers for pyrophilous species were 9.7 vs. 3.8, for red‐listed 8.7 vs. 2.3 and for red‐listed pyrophiles 4.7 vs. 1.2. Main conclusions Introducing fire back to boreal forests can aid in the recovery of rare species, but the landscape context considerably affects the success of restoring species. If restored habitats are located in landscapes that have lost their natural properties long ago, the success of restoration seems to be more challenging than in landscapes where habitats have been modified more recently.     

Linking fish trait responses to in‐stream habitat in reconstructed valley‐plugged stream reaches of the Coastal Plain,U.S.A.

Valley‐plug formation is a challenging consequence of stream channelization especially in physiographic regions with highly erodible soils. Upstream channel degradation and incision results in accelerated sediment delivery processes wherein downstream aggradation decreases stream power and creates sand‐clogged channels. Channel reconstruction is now meeting hydrogeomorphic goals related to valley‐plug remediation, yet there exists a need to understand how this practice also facilitates ecological restoration. We evaluated fish trait response to in‐stream habitat conditions in channelized, recently restored, and “least‐disturbed” reference reaches of Coastal Plain streams in West Tennessee. Restored reaches were ecologically similar to channelized reaches, having higher proportions of nest‐guarding omnivores that were correlated with higher percentages of pool habitats and lower wetted width:depth ratios compared to reference reaches. Reference reaches had higher proportions of fast‐water dwelling and specialized insectivores that were correlated with high abundance of large woody debris, high‐wetted width:depth ratios, and low percentages of pool habitats. We conclude that in‐stream habitats in reconstructed channels have yet to promote reach‐scale ecological restoration relative to fish assemblage organization because trait‐habitat associations were not similar to reference conditions. However, our results lend to the development of ecological restoration targets that can be incorporated in future channel reconstruction projects in valley‐plugged, channelized streams of the Coastal Plain.