Molecular phylogeny of Macrolycus (Coleoptera: Lycidae) with description of new species from China

Macrolycus is a genus of net‐winged beetles with 69 species distributed in the eastern Palearctic and northernmost part of the Oriental region. The first molecular phylogeny of Macrolycus was produced using an rrnL + tRNA‐Leu + nad1 mtDNA fragment. The major lineages and species limits were identified with morphology and molecular data. We propose that Cerceros is a subgenus of Macrolycus to enable identification of all adult specimens in the genus without DNA sequencing. Two species groups are proposed in Macrolycus s. str. and six in Cerceros. Additionally, twelve Macrolycus species are newly described from China: M. aquilinus, M. baihualingensis, M. bicolor, M. guangxiensis, M. jianfenglingensis, M. kuatunensis, M. lizipingensis, M. parvus, M. phoeniceus, M. rhodoneurus, M. rosaceus and M. sichuanensis. Macrolycus holzschuhi is proposed to be a junior subjective synonym of M. jeanvoinei. The highest diversity of Macrolycus is found in southern China. The species from the main islands of Japan are placed in two species groups: M. excellens is a sister to remaining species of the M. murzini group and the M. flabellatus group is a monophylum of closely related species in a sister position to the M. bicolor group.     

A New Functional Equation Analogous to CAUCHT-PEXIDER Functional Equation and its Application

The CAUCHY-PEXIDER functional equation H (x±y)=F(x) G(y) is generalized to the form H ((x^c±y^c)^1/c) = F(x) G(y), c≠0, assuming the function H(x) possesses a measurable majorant on a set of positive measure. The result is used to obtain a characterization of WEIBULL distribution. This functional equation is generalized to functions of vector variables.     

TFS1: A suppressor of cdc25 mutations in Saccharomyces cerevisiae

Summary The TFS1 gene of Saccharomyces cerevisiae is a dosage-dependent suppressor of cdc25 mutations. Overexpression of TFS1 does not alleviate defects of temperature-sensitive adenylyl cyclase (cdc35) or ras2 disruption mutations. The ability of TFS1 to suppress cdc25 is allele specific: the temperature-sensitive cdc25-1 mutation is suppressed efficiently but the cdc25-5 mutation and two disruption mutations are only partially suppressed. TFS1 maps to a previously undefined locus on chromosome XII between RDN1 and CDC42. The DNA sequence of TFS1 contains a single long open reading frame encoding a 219 amino acid polypeptide that is similar in sequence to two mammalian brain proteins. Insertion and deletion mutations in TFS1 are haploviable, indicating that TFS1 is not essential for growth.     

Convergence to Normality of the Asymptotic Quasi‐Score Function on a Linear Model

The asymptotic quasi‐likelihood method is considered for the model y_t = f_t(θ) + M_t, t = 0,1, …,T where f_tθ) is a linear predictable process of the parameter of interest θ, M_t is a martingale difference, and the nature of E(M_t² | ℱ_t–1) is unknown. This paper is concerned with the limiting distribution of the asymptotic quasi‐score function of such a model. Confidence intervals and hypothesis testing of θ is derived from the limiting distribution. Comparison is made between the estimates obtained through this method and those obtained through the least squares method.     

Molecular phylogeny of Pottiaceae (Musci) based on chloroplast rps4 sequence data

Comparative sequencing of the chloroplast rps4 gene was used to reconstruct the phylogenetic relationships within the family Pottiaceae (Musci). The results confirm that Ephemerum spinulosum, Splachnobryum obtusum, Goniomitrium acuminatum and Cinclidotus fontinaloides are clearly positioned within the Pottiaceae and that Hypodontium dregei is not a member. At subfamily level, the data support the subfamily Pottioideae as being a monophyletic clade. The Trichostomoideae are probably paraphyletic. Neither the subfamily Chionolomideae, represented in this study by Pseudosymblepharis schimperiana, nor the subfamily Erythrophyllopsoideae, represented by both known species, Erythrophyllastrum andinum and Erythrophyllopsis fuscula, are supported by the sequence data. The Timmielloideae should be excluded from the Pottiaceae. The Merceyoideae, represented in this study by Scopelophila cataractae, might form a sister clade to all other Pottiaceae, but their position is not fully resolved. At the genus level, Barbula is clearly polyphyletic since Barbula bolleana and Barbula indica appear in a clade clearly separated from Barbula unguiculata. Pottiopsis caespitosa and Leptobarbula berica are placed within the Trichostomoideae. Likewise, the genera Gymnostomum and Anoectangium are excluded from the Pottioideae and placed within the Trichostomoideae. Leptophascum leptophyllum is closely related with Syntrichia; Aloina is not closely related to Tortula or Crossidium. Evidence of a clade within the Pottioideae, formed of Leptodontium and Triquetrella, is provided.     

Approximate Michaelis-Menten kinetics displayed in a stochastic model of cell-mediated cytotoxicity

A nonlinear continuous-time Markov chain describing a two-step process of cytolytic cells binding to target and the subsequent lysis and release of label is shown to have kinetics which resemble standard enzyme-substrate kinetics. The Michaelis-Menten saturation function is found as a special case resulting when the target population is in excess. A comparison theorem for the pseudo-steady-state distribution Π is constructed to enable examination of that distribution whose expected value E and variance V satisfy - K_mE + (C_T − E)(T_T − E) + V = 0, where K_m is the Michaelis half-saturation constant and C_T and T_T are the initial populations of the two cell types. Using Π as an initial condition, the release of label process is examined. The main result is that the fraction of specific release, ƒ, has the approximate form when T_t is large, so that a nonlinear regression procedure is appropriate for the determination of the parameters.     

Tests of Independence and Zero Correlations Among P Random Variables

Suppose it is desired to determine whether there is an association between any pair of p random variables. A common approach is to test H₀ : R = I, where R is the usual population correlation matrix. A closely related approach is to test H₀ : R_pb = I, where R_pb is the matrix of percentage bend correlations. In so far as type I errors are a concern, at a minimum any test of H₀ should have a type I error probability close to the nominal level when all pairs of random variables are independent. Currently, the Gupta-Rathie method is relatively successful at controlling the probability of a type I error when testing H₀: R = I, but as illustrated in this paper, it can fail when sampling from nonnormal distributions. The main goal in this paper is to describe a new test of H₀: R_pb = I that continues to give reasonable control over the probability of a type I error in the situations where the Gupta-Rathie method fails. Even under normality, the new method has advantages when the sample size is small relative to p. Moreover, when there is dependence, but all correlations are equal to zero, the new method continues to give good control over the probability of a type I error while the Gupta-Rathie method does not. The paper also reports simulation results on a bootstrap confidence interval for the percentage bend correlation.     

Genetic interaction between the nip1 mutation and genes affecting integration and excision in phage P2

Summary The excision of prophage P2 is controlled by two genes, int and cox. (The cox gene discussed in this report is defined by the cox class II mutants, defined by Six and Lindqvist, 1978). The combined activity of these two genes is rather inefficient, however, since only about 1% of the lysogens carrying an int ⁺ cox ⁺ prophage actually produce phage when derepressed. The efficiency of phage production (and presumably excision) can be increased 100-fold by an additional mutation called nip1 (Calendar et al., 1972), which is dominant and is located in or near the int gene.The nip1 mutation was mapped between c5, a mutation in the C gene, and an amber int mutation, int150. Phages carrying nip1 and either int150 or a cox mutation, cox3, were prepared by recombination. The nip1 mutation was found to increase excision only when it was located on the same chromosome as an active int ⁺ gene and only if cox ⁺ gene product was also available. The cox gene, known to be located between genes B and C (Lindahl and Sunshine, 1972), was further localized to a region between 77.2 to 78.1% from the conventional left end of the P2 chromosome by comparing the ability of phages with overlapping deletions to promote excision of the prophage in a P2 nip1 c5 cox3 lysogen.Other features of the integration-excision system in P2 are discussed.     

A statistical model of the reproduction of aphids

1. The logistic function has been generally used to describe the reproductive process of a “population” of animal. However, this model can not give us any information about the reproductive process of “individuals” in the population. In this study a statistical model on the basis of the reproduction of individuals of barley aphid is presented to find the proportion of the mature individuals, the heterogeneity in reproductive ability of the aphids, etc.
2. The model is constructed as follows:
3. The probability that j insects are found on a plant at time t₀ is represented as Q(j).
4. The probability that h individuals of j have reproductive ability, say, mature individuals, in the period t₀ to t₁ is represented as B(h/j)=_jC_hw^h(1−w)^j−h, where w is the proportion of mature individuals.
5. In a population with a homogeneous reproductive ability, the probability that each parent lays i offspring in the period t₀ to t₁ is represented as P(i/m)=e^−mmⁱ/i!, where m is mean. And, in a population, m changes according to the gamma distribution. Hence the probability that a parent lays i offspring between t₀ and t₁ is represented as , where p and k are parameters of negative binomial distribution. The probability that h parents on a plant lays s offspring is represented as .
6. From the assumptions mentioned above, the probability that s offspring are to be found at time t₁ on a plant with the original j individuals at time t₀ is represented by
7. The experimental populations were demonstrated to fit well to the model.

     

The we Gene is a Modifier of the walGene in Mice

Interaction of gene wellhaarig (we) with genes waved alopecia(wal) and hairless (hr) was studied in mice. The mutant gene weis responsible for the development of a specific waved coat in homozygotes. Homozygous mice carrying mutant gene walalso have a wavy coat, though a partial alopecia develops with time in these animals. In homozygotes for thehr gene, hair loss is observed beginning from the age of ten days. A series of crosses we/weand wal/wal yielded animals with we/+wal/wal and we/we wal/wal genotypes. In micewe/+wal/wal carrying gene we at a single dose, alopecia is accelerated significantly as compared to the single-dose homozygotes +/+wal/wal. In we/we wal/wal mice, alopecia starts earlier than in we/+wal/wal mice; by the age of one month, the double homozygotes are almost hairless except for small body areas covered with a sparse coat. In addition, curliness of the first-generation hair in mice we/we wal/wal is much more expressed than in +/+wal/wal and we/we+/+ mice. The obtained evidence suggests that the wegene is a modifier of the wal gene because the former enhances the effects of the walgene, which is confirmed by the earlier onset of alopecia and progression of the latter in mice having the we/+wal/wal genotype and especially in we/we wal/wal animals. The we/we hr/+ mice do not differ in coat from we/we+/+ mice; in both cases, the coat is wavy. The coat of double homozygotes we/we hr/hr, is similar to that of we/we+/+ mice until ten days of age, when the signs of alopecia appear. By the age of 21 days, mice we/we hr/hr have lost their coat completely like mice +/+ hr/hr. Hence, the we gene is a modifier of the walgene though it does not interact with hrgene during the coat formation.     

Phylogenetic relationships within the genus Sargassum (Fucales, Phaeophyceae), inferred from ITS-2 nrDNA, with an emphasis on the taxonomic subdivision of the genus

Sequences from the ribosomal DNA internal transcribed spacer‐2 (ITS‐2) were compared among species of Sargassaceae including the genera Sargassum and Hizikia. Species of different subgenera and sections of Sargassum were used to assess the taxonomic relationships within the genus, especially the subdivisions of the subgenus Bactrophycus. Sequences were aligned in accordance with their common secondary structure. Phylogenetic trees were constructed using neighbor‐joining, maximum likelihood and maximum parsimony methods with three species of Turbinaria as outgroups. The resulting phylogenetic trees showed that the genus Sargassum is divided into three clades corresponding to the subgenera Phyllotrichia, Sargassum and Bactrophycus. This last subgenus is further divided into four distinct groups: a Spongocarpus clade, a Teretia clade, a Hizikia clade, and a Halochloa/ Repentia clade. The position of the section Phyllo‐cystae, excluded from the subgenus Bactrophycus and included within the subgenus Sargassum is once again confirmed by the present study. Current results strongly support the assignation of Hizikia fusiformis to the genus Sargassum. Based on morphological differences and a distinct position in the molecular trees, Hizikia should be recognized as a section in the subgenus Bactrophycus so that Hizikia (Okamura) Yoshida, stat. nov. is proposed. A remarkably low divergence of ITS‐2 sequences was observed for the species in the sections Repentia and Halochloa, suggesting very recent radiation of these species. The subgenus Sargassum is divided into three clades corresponding to the three known sections: Acanthocarpicae, Malacocarpicae and Zygocarpicae, previously recognized by the morphology of receptacles. The position of Sargassum duplicatum, S. carpophyllum, S.yendoi, S. piluliferum and S. patens within the subgenus Sargassum is discussed.     

New Species of Eimeria (Protozoa: Eimeriidae) from Malaysian Rats*

SYNOPSIS. Four new species of Eimeria were found in a survey of 255 rats of 14 species in Malaysia. E. tikusi n. sp. and E. edwardsi n. sp. are described from Edwards' rat Rattus edwardsi. The ellipsoidal, single-layered oocysts of E. tikusi average 30.3 by 24.4 μ. A micropyle is absent; a polar granule is present. Ovoid sporocysts average 14.2 by 9.8 μ. A sporocyst residuum and Stieda body are present. The ovoid, 2-layered oocysts of E. edwardsi average 29.1 by 21.8 μ. A micropyle is present; a polar granule is absent. Ellipsoidal to ovoid sporocysts average 14.5 by 6.5 μ. A sporocyst residuum is present; Stieda body is small or absent. E. surifer n. sp. is described from the red spiny rat Rattus surifer. Its ellipsoidal 3-layered oocysts average 34.7 by 24.8 μ. A micropyle is absent; a polar granule is present. The ellipsoidal sporocysts average 15.4 by 9.5 μ. A sporocyst residuum, Stieda body and sub-Stieda body are present. E. sabani n. sp. is described from the long-tailed giant rat R. sabanus. Its ellipsoidal 2-layered oocysts average 28.5 by 21.7 μ. A micropyle is absent; a polar granule is present. The ellipsoidal-to-ovoid sporocysts average 11.9 by 8.0 μ. A sporocyst residuum and Stieda body are present.     

A novel response-regulator is able to suppress the nodulation defect of a Bradyrhizobium japonicum nodW mutant

The two-component regulatory system Nod-VW of Bradyrhizobium japonicum is essential for the nodulation of the legume host plants Vigna radiata, V. unguiculata and Macroptilium atropurpureum. The NodV protein shares homology with the sensor-kinases, whereas the NodW protein is a member of the response-regulator class. We report here the identification of a new B. japonicum DNA region that is able to suppress the phenotypic defect of a nodW mutant, provided that this region is expressed from a foreign promoter. The minimal complementing region, which itself is not essential for nodulation in a nodW ⁺ background, consists of one gene designated nwsB (nodW-suppressor). The deduced amino acid sequence of the nwsB gene product shows a high degree of homology to NodW. The nwsB gene is preceded by a long open reading frame, nwsA, whose putative product appears to be a sensor-kinase. Downstream of nwsB, an open reading frame encoding a second putative response-regulator was identified. Interspecies hybridization revealed the presence of nwsAB-like DNA also in other Bradyrhizobium strains. Using nwsB-lacZ fusions, the nwsB gene was found to be expressed rather weakly in B. japonicum. This low level of expression is obviously not sufficient to compensate for a nodW ^– defect, whereas strong overexpression of nwsB is a condition that leads to suppression of the nodW ^– mutation.     

Estimation and Verification of Hypotheses in Some Zyskind-Martin Models with Missing Values

Several theorems on estimation and verification of linear hypotheses in some Zyskind-Martin (ZM) models are given. The assumptions are as follows. Let y = Xβ + e or (y, Xβ, σ²V) be a fixed model where y is a vector of n observations, X is a known matrix nXp with rank r(X) = r ≦ p < n, where p is a number of coordinates of the unknown parameter vector β, e is a random vector of errors with covariance matrix σ²V, where σ² is unknown scalar parameter, V is a known non-negative definite matrix such that R(X) ? R(V). Symbol R(A) denotes a vector space generated by columns of matrix A. The expected value of y is Xβ. In this paper four following Zyskind-Martin (ZM) models are considered: ZMd, ZMa, ZMc and ZMqd (definitions in sec. 1) when vector y y₁ y₂ involves a vector y₁ of m missing values and a vector y₂ with (n — m) observed values. A special transformation of ZM model gives again ZM model (cf. theorem 2.1). Ten properties of actual (ZMa) and complete (ZMc) Zyskind-Martin models with missing values (cf. theorem 2.2) test functions F are given in (2.11)) are presented. The third propriety constitutes a generalization of R. A. Fisher's rule from standard model (y, Xβ, σ²I) to ZM model. Estimation of vector y₁ (cf. 3.3) of vector β (cf. th. 3.2) and of scalar σ² (cf. th. 3.4) in actual ZMa model and in diagonal quasi-ZM model (ZMqd) are presented. Relation between y? ₁ and β is given in theorem 3.1. The results of section 2 are illustrated by numerical example in section 4.     

The mathematical theory of group selection. I. Full solution of a nonlinear Levins E = E(x) model

The first complete overtime solution is obtained for a group selection model of Levins E = E(x) type with recolonization but no other gene flow between islands. Assuming a subdivided population at carrying capacity, the model describes selection at a biallelic locus (A, a) where a is opposed by Mendelian selection but is favored by a lower rate of extinction of demes having high a frequency. By contrast to the linear diffusion equations encountered in classical mathematical genetics, the PDE governing the dynamics is now nonlinear in the metapopulation gene frequency distribution φ(x, t); furthermore, the initial conditions now heavily influence the equilibrium distribution φ_∞(x). A fully explicit formula (20) expressing this dependence is derived. The results indicate that a fixation is never reached, but (A, a) polymorphism in the metapopulation will result if , where s 1 parametrizes the strength of Mendelian selection, E(x) is the Levins extinction operator, h (typically in the open interval (0, 1)) is the dominance of a, and B is a parameter measuring the flatness of the initial distribution f(x) in the x → 1 limit.     

Interactions between mgr, asp, and polo: asp function modulated by polo and needed to maintain the poles of monopolar and bipolar spindles

We describe genetic interactions between mutations in mgr, asp, and polo, genes required for the correct behaviour of the spindle poles in Drosophila. The phenotype of a polo ¹ mgr double mutant is more similar to mgr than polo ¹ , but the frequency of circular monopolar figures (CMFs) seen with either mutant alone is additive, suggesting that the two gene products are required for independent functions in the formation of bipolar spindles. The asp ^E3 mgr double mutant arrests much earlier in development than either mutant alone, indicative of a strong block to cell proliferation. We discuss whether the lack of microtubular structures in these cells reflects an extended mitotic arrest, or if it is a more direct consequence of the double mutant combination. A polo ¹ asp ^E3 double mutant shows a dramatic synergistic increase in mitotic frequency. The loss of CMFs normally associated with the polo ¹ phenotype suggests that the Asp microtubule-associated protein is required to maintain the structure of spindle poles. We speculate that Asp protein might be a substrate for the serine-threonine protein kinase encoded by polo. Received: 8 August 1998 / Accepted: 13 September 1998     

Revision of the genera Nemotha Wood-Mason, 1884 and Tricondylomimus Chopard, 1930 stat. rev., with description of a new species (Dictyoptera: Mantodea)

The oriental species previously included in the rarely collected genus Nemotha Wood-Mason, 1884 (Mantodea: Iridopterygidae) are revised. N. coomani (Chopard, 1930) and N. mirabilis Beier, 1933 strongly differ from the type species N. metallica (Westwood, 1845) by family-level morphological features, but share a unique type of forefemoral armament with the genera Hapalopeza Stål, 1877 and Amantis Giglio-Tos, 1915, suggesting Nemotha is of a polyphyletic nature. The genus Tricondylomimus Chopard, 1930 is resurrected from synonymy to accommodate T. coomani, T. mirabilis n. comb. and the species which is newly described in this article, T. intermedius n. sp. The monotypic genus Pseudogousa Tinkham, 1937 and its species P. sinensis Tinkham, 1937 are synonymized with Tricondylomimus and T. mirabilis, respectively. The genus Tricondylomimus is placed in Iridopterygidae, while Nemotha is transferred to Hymenopodidae: Anaxarchini.     

Revalidation of Phyllocaulis renschi (Mollusca: Gastropoda: Veronicellidae) based on radula and mandible structures of taxonomic significance for the genus

Exospermastix robustus Verhoeff, 1951 (Mato Grosso, nr Cuiaba) is regarded as a species of Urostreptus; the gonopods of the type specimen are illustrated and their structure discussed. The species is in many ways similar to U. camerani and U. paxillatus, but is much larger than either. The status of the generic and specific names Stenostreptus hassleri Carl is reviewed after a study of the type material, and the previous estimate of hassleri as a species of Urostreptus is reaffirmed. New drawings made from the lectotype of hassleri are given. The gonopods of a species identified as U. borelli by F. Silvestri, the author of that name, are illustrated, and the suggestion made that borelli may be found to be a senior synonym of hassleri.