Conservation genetics of Sinai’s remnant populations of Moringa peregrina, an economically valuable medicinal plant

Moringa peregrina is an economically valuable tree of Egyptian deserts. It is used medicinally, provides a highly nutritious supplement to Bedouin diets, provides fodder for livestock, and is used for fire wood. M. peregrina seeds have been a source of high-quality oil for cosmetics and perfumes since antiquity. Due to unmanaged grazing and over-collection, M. peregrina has become one of the most endangered tree species in the Egyptian desert ecosystem. A long-term conservation program is urgently needed to maintain or increase the number and size of M. peregrina populations. Ten populations harboring a total of 130 adult M. peregrina were sampled from three disjunct Wadis in South Sinai (W. Me’ar, W. Fieran and W. Zaghra). Open-pollinated seedlings were electrophoretically analyzed to address two basic questions: (1) how is genetic diversity distributed within and among populations within these three Wadis; and (2) what is the mating system of this species. M. peregrina has a mixed mating system with a selfing rate up to 16% and has limited genetic diversity within and significant genetic differentiation among its populations, the majority of which occurs among Wadis. Direct protection is urgently needed to decrease genetic deterioration within M. peregrina populations and to improve their ability to maintain or improve their population numbers. The priority of in situ conservation should be to conserve a few large well-distributed populations representing different Wadis. Ex situ germplasm collections should be made across the species’ range to ensure a representative sample of its genetic variation. Seed orchards designed to maximize cross-fertilization among unrelated individuals should be established to generate propagules to supplement natural populations.     

Science and Sentiment: Grinnell’s Fact-Based Philosophy of Biodiversity Conservation

At the beginning of the twentieth century, the biologist Joseph Grinnell made a distinction between science and sentiment for producing fact-based generalizations on how to conserve biodiversity. We are inspired by Grinnellian science, which successfully produced a century-long impact on studying and conserving biodiversity that runs orthogonal to some familiar philosophical distinctions such as fact versus value, emotion versus reason and basic versus applied science. According to Grinnell, unlike sentiment-based generalizations, a fact-based generalization traces its diverse commitments and thus becomes tractable for its audience. We argue that foregrounding tractability better explains Grinnell’s practice in the context of his time as well as in the context of current discourse among scientists over the political “biases” of biodiversity research and its problem of “reproducibility.”     

Modifying the ‘pulse–reserve’ paradigm for deserts of North America: precipitation pulses,soil water,and plant responses

The ‘pulse–reserve’ conceptual model—arguably one of the most-cited paradigms in aridland ecology—depicts a simple, direct relationship between rainfall, which triggers pulses of plant growth, and reserves of carbon and energy. While the heuristics of ‘pulses’, ‘triggers’ and ‘reserves’ are intuitive and thus appealing, the value of the paradigm is limited, both as a conceptual model of how pulsed water inputs are translated into primary production and as a framework for developing quantitative models. To overcome these limitations, we propose a revision of the pulse–reserve model that emphasizes the following: (1) what explicitly constitutes a biologically significant ‘rainfall pulse’, (2) how do rainfall pulses translate into usable ‘soil moisture pulses’, and (3) how are soil moisture pulses differentially utilized by various plant functional types (FTs) in terms of growth? We explore these questions using the patch arid lands simulation (PALS) model for sites in the Mojave, Sonoran, and Chihuahuan deserts of North America. Our analyses indicate that rainfall variability is best understood in terms of sequences of rainfall events that produce biologically-significant ‘pulses’ of soil moisture recharge, as opposed to individual rain events. In the desert regions investigated, biologically significant pulses of soil moisture occur in either winter (October–March) or summer (July–September), as determined by the period of activity of the plant FTs. Nevertheless, it is difficult to make generalizations regarding specific growth responses to moisture pulses, because of the strong effects of and interactions between precipitation, antecedent soil moisture, and plant FT responses, all of which vary among deserts and seasons. Our results further suggest that, in most soil types and in most seasons, there is little separation of soil water with depth. Thus, coexistence of plant FTs in a single patch as examined in this PALS study is likely to be fostered by factors that promote: (1) separation of water use over time (seasonal differences in growth), (2) relative differences in the utilization of water in the upper soil layers, or (3) separation in the responses of plant FTs as a function of preceding conditions, i.e., the physiological and morphological readiness of the plant for water-uptake and growth. Finally, the high seasonal and annual variability in soil water recharge and plant growth, which result from the complex interactions that occur as a result of rainfall variability, antecedent soil moisture conditions, nutrient availability, and plant FT composition and cover, call into question the use of simplified vegetation models in forecasting potential impacts of climate change in the arid zones in North America.     

Environmental and anthropogenic determinants of the spread of alien plant species: insights from South Africa’s quaternary catchments

Alien plants invasion has negative impacts on the structure and functionality of ecosystems. Understanding the determinants of this process is fundamental for addressing environmental issues, such as the water availability in South Africa’s catchments. Both environmental and anthropogenic factors determine the invasion of alien species; however, their relative importance has to be quantified. The aim of this paper was to estimate the importance of 32 explanatory variables in predicting the distribution of the major invasive alien plant species (IAPS) of South Africa, through the use of Species Distribution Models. We used data from the National Invasive Alien Plants Survey, delineated at a quaternary catchment level, coupled with climatic, land cover, edaphic, and anthropogenic variables. Using two-part generalized linear models, we compared the accuracy of two different sets of variables in predicting the spatial distribution of IAPS; the first included environmental correlates alone, and the second included both environmental and anthropogenic variables. Using Random Forest, we explored the relative importance of the variables in producing a map of potential distribution of IAPS. Results showed that the inclusion of anthropogenic variables did not significantly improve model predictions. The most important variables influencing the distribution of IAPS appeared to be the climatic ones. The modeled potential distribution was analyzed in relation to provinces, biomes, and species’ minimum residence time.     

On the Value of Taxonomy,Phylogeny, and Systematics to Orchid Conservation: Implications for China’s Yachang Orchid Reserve

Orchid classification has undergone a series of significant changes during the past decade as molecular phylogenetic studies have examined relationships at all taxonomic levels in the family. Today, the 750 genera and 25,000 species of Orchidaceae are organized into five subfamilies, the two largest of which (Epidendroideae and Orchidoideae) are further divided into 19 tribes and 43 subtribes. Whereas some of these groups are relatively small in terms of total species numbers, and may be of little horticultural or medicinal value, they are especially important for understanding orchid evolution and may deserve to be conserved for this reason alone. The question of which orchids to conserve is a complex one, but the science of systematics, including taxonomy and phylogenetics, has an undeniable role to play in answering that question. Among the many ways that phylogenetic trees can assist biologists in setting conservation priorities are by: 1) guiding taxonomists in naming species, which is essential for creating checklists within floras, monographs, and inventories; 2) discovering overlooked, rare or cryptic species that deserve recognition and protection; 3) determining whether or not a taxon is actually a species or simply a variant or hybrid; 4) predicting species that may be of value to humans for economic value; 5) identifying species that may have particularly important scientific value for better understanding the biology of plants. In the same way that we cannot protect all habitats, we may not be able to save every orchid species. Priorities must be established. The Yachang Orchid Reserve has been recognized as important not only because of the number of individual orchid plants that grow there, but also because of its great orchid diversity. Diversity is a product of evolution by natural selection, and the science of phylogenetics has a role to play in better understanding that process.     

Limiting similarity and Darwin’s naturalization hypothesis: understanding the drivers of biotic resistance against invasive plant species

Several hypotheses have been proposed to explain biotic resistance of a recipient plant community based on reduced niche opportunities for invasive alien plant species. The limiting similarity hypothesis predicts that invasive species are less likely to establish in communities of species holding similar functional traits. Likewise, Darwin’s naturalization hypothesis states that invasive species closely related to the native community would be less successful. We tested both using the invasive alien Ambrosia artemisiifolia L. and Solidago gigantea Aiton, and grassland species used for ecological restoration in central Europe. We classified all plant species into groups based on functional traits obtained from trait databases and calculated the phylogenetic distance among them. In a greenhouse experiment, we submitted the two invasive species at two propagule pressures to competition with communities of ten native species from the same functional group. In another experiment, they were submitted to pairwise competition with native species selected from each functional group. At the community level, highest suppression for both invasive species was observed at low propagule pressure and not explained by similarity in functional traits. Moreover, suppression decreased asymptotically with increasing phylogenetic distance to species of the native community. When submitted to pairwise competition, suppression for both invasive species was also better explained by phylogenetic distance. Overall, our results support Darwin’s naturalization hypothesis but not the limiting similarity hypothesis based on the selected traits. Biotic resistance of native communities against invasive species at an early stage of establishment is enhanced by competitive traits and phylogenetic relatedness.     

Derivation of soil to plant transfer functions for metals and metalloids: impact of contaminant’s availability

Plant and Soil - Soil to plant transfer models (SPT) are needed to predict levels of potentially toxic elements (PTE’s) in crops in view of risk assessment. Here we developed a field study to...     

Some Mediterranean plant species (Lavandula spp. and Thymus satureioides) act as potential ‘plant nurses’ for the early growth of Cupressus atlantica

The mycorrhizal status of several representative shrub species (Lavandula spp. and Thymus satureioides) in Moroccan semiarid ecosystems, was evaluated as well as their contribution to the mycorrhizal potential of the soil. Furthermore, the rhizosphere soils collected under these target species were tested for their influence on the growth of Cupressus atlantica, a tree species whose natural stands has declined in this area. Soil samples were collected from the rhizosphere of L. stoechas, L. dentata and of C. atlantica existing in the experimental area. Control samples were randomly collected from bare soil sites, away from plant influence.All the target species formed AM symbiosis and the extent of AM fungal colonization was not significantly different between plant species. No significant difference was detected between the total number of AM fungal spores of the bare soil and those recorded in the root zones of target species and C. atlantica. Three genera of AM fungi (Scutellospora, Glomus and Acaulospora) were present in the rhizospheres of the plant species and in the bare soil.The number of mycorrhizal propagules in soil originating from around the four target plant species was significantly higher than the one in the bare soil (Figure 1). The most probable number (MPN) of mycorrhizal propagules per 100 g of dry soil ranged from 7.82 (bare soil) to 179.7 (L. dentata and C. atlantica) and 244.5 (L. stoechas and T. satureioides). As the total number of spores was not different for the soil of different origins, the increase of the mycorrhizal soil infectivity (MSI) mainly resulted from larger AM mycelial networks that constituted the main source of AM fungal inoculum. In addition, this MSI enhancement was linked with changes in the functioning of soil microbial communities. In a glasshouse experiment, the growth of C. atlantica seedlings was significantly higher in the C. atlantica and in the shrub species soils than in the bare soil. Although the AM inoculum potential is not sufficient to ensure the development of forest trees in Mediterranean ecosystems, the use of plant nurses such as T. satureioides or Lavandula spp. could be of great interest to restore a self-sustaining vegetation cover to act against desertification.     

Wild-ing the Ethnography of Conservation: Writing Nature’s Value and Agency In

When reading ethnographic literature on nature conservation, one may wonder: where has nature gone? Social anthropologists have written nuanced ethnographies of how the environmental projects of governments and transnational NGOs encounter, dispossess, clash culturally with, and try to govern native people across the world. Yet, these diverse ethnographies often say little about what motivates those encounters firstly: local and global nature, especially wildlife, plants, and the planet’s ecological crisis. Thus, this paper seeks ways how ethnographic writing on conservation practice could better reflect that the planet’s many self-willed, struggling, and valued non-humans, too, enter conservation’s encounters. To find paths toward such a ‘wild-ing’ of ethnography, the paper locates and reviews disparate materials from across the social-anthropological literature on biodiversity conservation. The review is structured through three questions: How does and could the ethnography of conservation represent nature’s value? How can it show that animals, plants, and other nature make and meet worlds? How can it incorporate natural science data about non-human worlds and ecological crisis? Altogether, we understand nature conservation clearer through the interdisciplinary and more-than-human ethnography of world-making encounters. Such wilder ethnography may also better connect people’s suffering and nature’s vanishing – as problems both for anthropology and conservation science.     

Altitudinal patterns of plant species richness on the Baekdudaegan Mountains, South Korea: mid-domain effect, area, climate, and Rapoport’s rule

We studied the altitudinal patterns of plant species richness and examined the effects of geometric constraints, area, and climatic factors on the observed richness patterns along the ridge of the Baekdudaegan Mountains, South Korea. Rapoport’s altitudinal rule was evaluated by examining the relationship between altitudinal range size and midpoint. We also examined the latitudinal effect on species richness. Plant data were collected from 1,100 plots along a 200–1,900 m altitudinal gradient along the ridge of the Baekdudaegan. A total of 802 plant species from 97 families and 342 genera were found. The altitudinal patterns of plant species richness along the ridge of the Baekdudaegan depicted distinctly hump-shaped patterns, although the absolute altitudes of the richness peaks vary somewhat among plant groups. While the mid-domain effect (MDE) was the most powerful explanatory variable in simple regression models, species richness was also associated with climatic factors, especially mean annual precipitation (MAP) and temperature (MAT) in multiple regression models. The relative importance of the MDE and climatic factors were different among plant groups. The MDE was more important for woody plants and for large-ranged species, whereas climatic factors were better predictors for total and herbaceous plants and for small-ranged species. Rapoport’s altitudinal rule and a latitudinal effect on species richness were not supported. Our study suggests that a combined interaction of the MDE and climatic factors influences species richness patterns along the altitudinal gradient of the Baekdudaegan Mountains, South Korea.     

Conservation by trans-border cooperation: population genetic structure and diversity of geoffroy’s bat (Myotis emarginatus) at its north-western european range edge

Biodiversity and Conservation - In the European Union, all bat species are strictly protected and member states must ensure their conservation. However, if populations are genetically structured,...     

Black-Tailed Prairie Dogs,Cattle, and the Conservation of North America’s Arid Grasslands

Prairie dogs (Cynomys spp.) have been eliminated from over 95% of their historic range in large part from direct eradication campaigns to reduce their purported competition with cattle for forage. Despite the longstanding importance of this issue to grassland management and conservation, the ecological interactions between cattle and prairie dogs have not been well examined. We address this issue through two complementary experiments to determine if cattle and prairie dogs form a mutualistic grazing association similar to that between prairie dogs and American bison. Our experimental results show that cattle preferentially graze along prairie dog colony edges and use their colony centers for resting, resembling the mutualistic relationship prairie dogs have with American bison. Our results also show that prairie dog colonies are not only an important component of the grassland mosaic for maintaining biodiversity, but also provide benefits to cattle, thereby challenging the long-standing view of prairie dogs as an undesirable pest species in grasslands.     

Characterization of nine microsatellite loci for a globally vulnerable species, Reeves’s Pheasant (Syrmaticus reevesii)

Reeves’s Pheasant, Syrmaticus reevesii, is an endemic species of China. Due to habitat loss, poaching and human disturbance, its wild population has been decreased drastically and it is listed as a globally vulnerable species by IUCN/BirdLife/WPA (IUCN 2008). Here, we report nine new polymorphic microsatellite markers isolated from the Reeves’s Pheasant. The number of alleles per locus varies between four and fourteen, with expected heterozygosity ranging from 0.349–0.776 (n  = 90). These polymorphic loci provide a valuable tool for future population studies that relate to the conservation of this pheasant.     

Conservation genetics of Boelen’s python (Morelia boeleni) from New Guinea: reduced genetic diversity and divergence of captive and wild animals

Boelen’s python (Morelia boeleni) is a montane New Guinea endemic found in highlands above 1000 m and below the tree line. The ecology, natural history, distribution, population size, and conservation status of this species are largely unknown. It has a protected status in Papua New Guinea but not in Indonesian Papua and several US and European zoos have active captive breeding programs that have been largely unsuccessful. To understand the degree of genetic diversity in wild and captive animals we undertook a genetic analysis of 90 M. boeleni for which we sequenced two mtDNA loci and one nuclear locus for a total of 1,418 bp of sequence data per individual. All 16 wild-caught M. boeleni from Indonesia and all captive M. boeleni are genetically uniform for all three loci. The single wild-caught animal from Papua New Guinea showed extremely low levels of genetic divergence and diversity from the Indonesian and captive samples. Data from two congeners, M. amethistina and M. viridis, suggests that M. boeleni have reduced genetic variation with a small effective population size possibly due to historical bottlenecks. These data demonstrate the need for further studies of genetic diversity of M. boeleni from across its range and raise particular concern for the limited genetic diversity of M. boeleni used captive breeding programs in zoological parks.     

Population Status of the Critically Endangered Preuss’s Red Colobus Monkey (Piliocolobus preussi Matschie 1900) and Recommendations for Its Conservation

International Journal of Primatology - Overhunting and habitat loss from the expansion of agriculture and extractive industries are the primary threats to primate species, 65% of which are...     

The Hitchhiker’s guide to island endemism: biodiversity and endemic perennial plant species in roadside and surrounding vegetation

Roadsides are habitats with very specific environmental conditions, often substantially differing from their natural surroundings. However, roads can have a positive effect on local vascular plant species richness. Endemic species on oceanic islands are considered to be less disturbance-adapted than native non-endemics and thus should be negatively affected by roads. Islands provide optimal conditions for testing this, as they possess a large share of clearly defined endemic species. This study focuses on a comparison of endemic plant species in roadside and surrounding communities and the interacting effects of elevation, vegetation type and trade wind-induced precipitation differences. We applied 96 circular plots with 50 m radius along two elevational gradients on the eastern (humid) and western (dry) slope of La Palma, Canary Islands, ranging from 100 to 2,400 m. Interestingly, we found roads to have a significant positive effect on endemic richness and the percentage of endemics as well as the same tendency for plant species richness after correcting for elevation and precipitation. Endemic species turnover was relatively high. The opening of cliffs during construction and, not to be overlooked, the protection from disturbances such as fire and omnipresent introduced herbivores (mainly rabbits or goats) probably leads to a positive effect of roads on endemics. In addition, many endemics might profit from species-specific dispersal capabilities well suited for roadside conditions. However, we do not argue for the use or even construction of roads for nature conservation but suggest protecting existing endemic populations because natural areas have a higher conservation value.     

Hill’s “Biological Plausibility” Criterion: Integration of Data from Various Disciplines for Epidemiology and Radiation Epidemiology

Biology Bulletin - In this review, various aspects of the causality criterion “Biological Plausibility,” which is sometimes replaced by the criterion “Coherence”...