Field technique using the acetylene reduction method to assay nitrogenase activity and its association with the rice rhizosphere

Summary A plastic bag, used as a field assay chamber, assisted in the investigation of the acetylene reduction method as a technique to measure nitrogen-fixing activity in rice paddy fields. A study of the change in volume of the plastic bag and of the loss of acetylene and ethylene from the bag provided evidence that this plastic bag method was feasible in field assays. The field assay of rice at the grain ripening stage showed that the nitrogen-fixing activity increased linearly after a lag phase of 0 to 3 hours during a time-course experiment.Detachment of the aerial part of the rice plant from its root remaining in the field did not affect the nitrogen-fixing activity of the root.The markedly higher nitrogen-fixing activity in the planted areas of the field compared with the nonplanted areas between the plant rows indicated that the nitrogenase activity in the field is associated with the roots of the rice plant. re]19751204     

Enumeration and identification of nitrogen-fixing bacteria from forage grass roots

Root-soil cores were collected from forage grasses growing in a subtropical region of Texas and tested for acetylene reduction activity. The population density of nitrogen-fixing bacteria was measured, using various media and incubation conditions. Bacteria were confirmed as nitrogen fixing, using the acetylene reduction assay, and were classified according to standard biochemical and cultural methods. The majority of the nitrogen-fixing bacteria isolated from roots were Enterobacter cloacae or Klebsiella pneumoniae. Root-associated, nitrogen-fixing bacteria were isolated from 21 of 24 root-soil cores. The population densities of nitrogen-fixing bacteria ranged from approximately 10 to 3 x 10 per g of root. Population density on roots was significantly correlated with the rate of acetylene reduction but the relationship was not linear.     

Nitrogen fixation throughout growth,and varietal differences in nitrogen fixation by the rhizosphere of rice planted in pots

Summary The nitrogen-fixing activity in the rhizospheres of various rices was measured by the acetylene-reduction method throughout plant growth in green-house pots. The activity began to increase 4 weeks after transplanting, increased until heading stage, then decreased. The concentrations of exchangeable ammonium and sugars in the soil were not related to the variation of nitrogen-fixing activity during rice growth.The nitrogen-fixing activities in the rhizospheres of 41 rice varieties in pots were measured to discover varietal differences. Levels of nitrogen fixation were highly correlated with the rices' dry root weight at heading stage.     

Effect of Rice Plants on Nitrogenase Activity of Flooded Soils

In samples of flooded soil containing blue-green algae (cyanobacteria), the presence of rice plants did not influence the nitrogenase activity of the algae. Nitrogenase activity of heterotrophic bacteria was enhanced by the presence of rice plants, but this activity was not affected by changes in plant density. The rate of nitrogen fixation in the rhizosphere, however, varied significantly among the 16 rice varieties tested. A simple method was devised to test the nitrogen-fixing activity in the root zone of rice varieties, and data were obtained showing marked differences in the activities of the 16 varieties. In tests of two varieties with dissimilar rates of nitrogen fixation in their rhizospheres, the variety which had the greater root weight and lesser shoot weight and which supported greater methane formation had the greater nitrogenase activity.     

Population of Aerobic Heterotrophic Nitrogen-Fixing Bacteria Associated with Wetland and Dryland Rice

Nitrogen-fixing activity and populations of nitrogen-fixing bacteria associated with two varieties of rice grown in dryland and wetland conditions were measured at various growth stages during the dry season. Acetylene reduction activities were measured both in the field and for the hydroponically grown rice, which was transferred from the field to water culture 1 day before assay. The activities measured by both methods were higher in wetland than in dryland rice. The population of nitrogen-fixing heterotrophic bacteria associated with rhizosphere soil, root, and basal shoots was determined by the most probable number method with semisolid glucose-yeast extract and semisolid malate-yeast extract media. The number of nitrogen-fixing bacteria was higher in wetland conditions than in dryland conditions. The difference between two conditions was most pronounced in the population associated with the basal shoot. The glucose medium gave higher counts than did the malate medium. Colonies were picked from tryptic soy agar plates, and their nitrogen-fixing activity was tested on a semisolid glucose-yeast extract medium. The incidence of nitrogen-fixing bacteria among aerobic heterotrophic bacteria in association with rhizosphere soil, root, and basal shoots was much lower in dryland rice than in wetland rice.     

Heterotrophic nitrogen fixation (acetylene reduction) associated to flooded rice: A modified measurement technique in the field

A modifiedin situ technique for measuring heterotrophic nitrogen fixing (acetylene reducing) activity associated to rice is proposed. Ethylene evolution rates measured in opaque cylinders covering the stems of rice plants which have been cut 10 cm over the water level were found independent of the diurnal cycle. Cutting of the leaves resulted in decreased variation between plants and suppression of the acceleration of ethylene evolution rate after 12 h incubation as compared to intact plants. In both systems ethylene evolved was swept by a current of methane and the molar ratio between methane and ethylene was stabilized after 12 h. Methane evolution rates remained stable during 12 h and more than 24 h in whole plants and cut plants respectively. It is suggested that alteration in the active gas transport system after 12 h incubation under 10% acetylene may lead to erroneous evaluation of the actual ethylene production in the root's environment. The average values of ethylene evolution rates by cut plants between 12 and 24 h of incubation may be used for comparative studies of nitrogen fixing activity associated to flooded rice.     

Isolation and 16S rRNA sequence analysis of the beneficial bacteria from the rhizosphere of rice

The present study deals with the isolation of plant growth promoting rhizobacteria (PGPR) from rice (variety NIAB IRRI-9) and the beneficial effects of these inoculants on two Basmati rice varieties. Nitrogen-fixing activity (acetylene-reduction activity) was detected in the roots and submerged shoots of field-grown rice variety NIAB IRRI-9. Estimation of the population size of diazotrophic bacteria by ARA-based MPN (acetylene reduction assay-based most probable number) in roots and shoots indicated about 10(5)-10(6) counts/g dry weight at panicle initiation and grain filling stages. Four bacterial isolates from rice roots and shoots were obtained in pure culture which produced phytohormone indoleacetic acid (IAA) in the growth medium. Among these, three isolates S1, S4, and R3 reduced acetylene to ethylene in nitrogen-free semi-solid medium. Morphological and physiological characteristics of the isolates indicated that three nitrogen-fixing isolates S1, S4, and R3 belonged to the genus Enterobacter, while the non-fixing isolate R8 belonged to the genus Aeromonas. 16S rRNA sequence of one isolate from root (R8) and one isolate from shoot (S1) was obtained which confirmed identification of the isolates as Aeromonas veronii and Enterobacter cloacae, respectively. The 1517-nucleotide-long sequence of the isolate R8 showed 99% similarity with Aeromonas veronii (accession No. AF099023) while partial 16S rRNA sequence (two stretches of total 1271 nucleotide length) of S1 showed 97% similarity with the sequence of Enterobacter cloacae (accession No. AJ251469). The seedlings of two rice varieties Basmati 385 and Super Basmati were inoculated with the four bacterial isolates from rice and one Azospirillum brasilense strain Wb3, which was isolated from wheat. In the rice variety Basmati 385, maximum increase in root area and plant biomass was obtained in plants inoculated with Enterobacter S1 and Azospirillum Wb3, whereas in the rice variety Super Basmati, inoculation with Enterobacter R3 resulted in maximum increase of root area and plant biomass. Nitrogen fixation was quantified by using 15N isotopic dilution method. Maximum fixation was observed in Basmati 385 with the inoculants Azospirillum Wb3 and Enterobacter S1 where nearly 46% and 41% of the nitrogen was derived from atmosphere (%Ndfa), respectively. In general, higher nitrogen fixation was observed in variety Basmati 385 than in Super Basmati, and different bacterial strains were found more effective as inoculants for the rice varieties Basmati 385 and Super Basmati.     

In situ acetylene-ethylene assay of biological nitrogen fixation in lowland rice soils

Summary An in situ device for assaying biological nitrogen fixation in flooded rice soils, using the acetylene reduction method, was developed. Diurnal variations in acetylene reduction by an inoculated field plot and by laboratory-grown cultures of nitrogen-fixing algae showed a prominent single-peak pattern of nitrogenase activity. The peak occurred at mid-day for laboratory-grown algae and at late afternoon for the algae grown in the field plot. Some nitrogenase activity was noted during the night. Acetylene reduction studies in rice fields of Albay province, Philippines, showed an estimated fixation of 18.5 to 33.3 kg N/ha each cropping season for the fields of Puro soil and 2.3 to 5.7 kg N/ha each cropping season for the fields of Santo Domingo soil. re]19751202     

Problems of the Acetylene Reduction Technique Applied to Water-Saturated Paddy Soils

The acetylene reduction assay for the measurement of N₂ fixation in a water-saturated paddy soil is limited by the slow diffusion of acetylene and ethylene. In laboratory incubation tests, vigorous shaking after the assay period is needed to release ethylene into the gas within the assay vials. Shaking prior to the incubation is also effective for dissolving acetylene in the water-saturated soil. However, a water-saturated soil depth of less than 10 mm during incubation is recommended. In field assays, some amounts of ethylene remain in the water-saturated soil phase of the acetylene reduction assay chamber, but stirring the water-saturated soil before sampling reduces the amount of ethylene remaining in soil. Evidence of a downward movement of acetylene and an upward movement of ethylene through rice plants was obtained. Because of the rapid transfer of acetylene to rice plant roots, an in situ acetylene reduction assay covering a rice hill is likely to detect nitrogen fixation in the proximity of roots where acetylene is easily accessible. Acetylene introduction to the water-saturated soil phase prior to assay did not greatly increase the acetylene reduction rate. Carbon dioxide enrichment in the assay chamber did not enhance nitrogen fixation in a paddy including rice and algae during a 1-day cycle.     

铝胁迫下水稻幼苗根系的生理特性

以4叶1心期的水稻幼苗为材料,在水培条件下,研究了0、0.5和7.5 mmol·L^-1Al胁迫下水稻Al敏感品种IR24、耐Al品种金优725和两优培九幼苗根系的生理特性.结果表明：在7.5 mmol·L^-1Al胁迫下,耐Al品种根系活力下降幅度远小于Al敏感品种,Al敏感品种H₂O₂含量较Al耐性品种高.在Al胁迫下,各品种根系线粒体中CAT的增加幅度较小;IR24和金优725根系的线粒体POD活性随Al胁迫浓度的增加先升后降,两优培九POD活性则呈增加趋势;IR24根系线粒体APX活性随Al胁迫浓度的增加先升后降,金优725和两优培九的线粒体APX活性则呈上升趋势.随Al胁迫浓度的增加,各品种根系谷氨酸含量先增加后下降,柠檬酸含量下降,磷酸烯醇式丙酮酸含量增加.Al敏感品种抗氰呼吸速率占总呼吸的比率较耐Al品种明显降低.     

Respiration supported nitrogenase activity of isolated Rhizobium meliloti bacteroids

Bacteroids having a high level of respiration-supported nitrogenase activity were isolated from nitrogen-fixing alfalfa root nodules. Gentle maceration under anaerobic conditions in the presence of sodium succinate and a fatty acid scavenging agent were employed in this method. A large proportion of isolated bacteroids retained a triple membrane structure as shown by transmission electron microscopy. Dicarboxylic acids of the TCA cycle (malate, fumarate, succinate), but not glutamate or aspartate, supported sufficient respiratory activity to supply the nitrogenase system with ATP and reducing equivalents and to protect the nitrogenase system from inactivation by 4% oxygen over a period of 20-30 min. Sugars did not support nitrogenase activity in intact bacteroids. The properties of the isolated bacteroids were ascribed to minimal damage to the cytoplasmic membrane and peribacteroidal membrane during isolation. With succinate as substrate and oxygen as terminal electron acceptor, initial nitrogenase activity was determined at 4% oxygen in the gas phase of the assay system employed. At this oxygen concentration, the sustained rate of acetylene reduction by respiring bacteroids was linear up to 30 min. Bacteroid activity declined rapidly with time of exposure to oxygen above 4% in the gas phase. The optimum temperature range for this activity was 10-20 degrees C. Nitrogenase activity was measurable at incubation temperatures below 10 degrees C under 4% oxygen. Functionally intact bacteroids had little nitrogenase activity under anaerobic conditions in the presence of an external source of ATP and reductant. Treatment of the bacteroids with chlorpromazine eliminated respiration-supported activity and rendered the bacteroid cell membrane permeable to external ATP. Bacteroids treated with chlorpromazine had high acetylene reducing activity with external ATP and dithionite in the absence of oxygen.     

氮肥处理对氮素高效吸收水稻根系性状及氮肥利用率的影响

2011—2012年在土培条件下,以氮素吸收效率差异较大的15个常规籼稻为供试材料,研究氮肥运筹对不同氮效率品种根系性状、成熟期吸氮量及氮肥利用率的影响,分析影响氮高效水稻氮素吸收的主要根系性状。结果表明:(1)各氮肥处理下,成熟期吸氮量均表现为氮高效品种氮中效品种氮低效品种。适量增施氮肥及基肥+促花肥处理有利于氮高效品种吸氮量的增加,氮素吸收受品种、氮肥处理的显著影响。(2)在施氮量处理下,氮高效品种单株不定根数、单株根干重、单株不定根总长大或较大,单株根活力在常氮(N2)、高氮(N3)处理下有一定的优势;在施氮时期处理下,氮高效品种单株不定根数、单株不定根总长、单株根干重、单株根系总吸收面积、单株根系活跃吸收面积、抽穗期冠根比多数处理有优势;增施氮肥有利于促进氮高效品种单株不定根总长和单株根活力的提高,适量施氮有利于单株不定根数、单株根干重增加,前期施氮可促进不定根的发生和伸长,后期施氮有利于不定根的充实和根系生理性状的提高。此外,增施氮肥可提高各类品种冠根比;(3)在常氮、高氮处理下,氮高效品种氮肥利用率大于氮中效、氮低效品种。(4)提高单株不定根数、单株不定根总长、单株根活力及抽穗期冠根比有利于各类品种吸氮量的提高,增加根干重对氮高效品种吸氮量的提高也有显著的促进作用。结合相关分析与通径分析结果,抽穗期冠根比及单株不定根数、单株根活力、单株不定根总长、单株根干重是影响氮高效品种吸氮能力的主要根系性状。     

Biology of nitrogen-fixing Rhizobacteria

In non-legumes associative nitrogen-fixing system, several genera of rhizobacteria have been reported. The object of this paper is to summarize the current understanding of how rhizobacteria adhere to the root surface of non-legumes especially rice and other cereal crops. Evidence for involvement of rice lectin in adhesion will be reviewed. An emphasis will be placed on theKlebsiella R15 ammonium assimilation system in free-living state and in associative state with rice seedlings. Nitrogenase and glutamine synthetase (GS) activities of associativeKlebsiella increased significantly in the rhizosphere of rice comparing to the free-living state. In rice, the soluble form of GS specific activity appear to be slightly lower than in rice root in the absence of bacteria. These results suggest that nitrogen-fixing activity has been enhanced during association. The dinitrogen fixed should be changed to amino acids via GS-GOGAT pathway in bacteria. Transfer of fixed nitrogen and assimilation in the rice plant is the problem that needs to be solved in order to improve the efficiency of associative nitrogen fixation.     

长江三角洲主要超级稻CH4排放特征及其与植株生长特性的关系

采用盆栽试验研究了长江三角洲14个主要超级稻品种(6个粳型超级稻和8个籼型杂交超级稻)CH₄排放特征及其与植株生长特性之间的关系.结果表明: 粳型和籼型超级稻全生育期CH₄排放均呈双峰模式,排放峰值分别出现在分蘖盛期和孕穗期.粳型超级稻的平均CH₄排放总量比籼型超级稻高37.6%(P<0.01),品种间排放差异主要出现在生长后期.虽然两种类型超级稻的CH₄排放总量均与最大叶面积呈显著正相关,但CH₄排放与其他生长特性的关系因品种类型而异.在株高上,粳型超级稻CH₄排放总量与株高呈显著正相关,而籼型超级稻的相关不显著.在生产力上,籼型超级稻CH₄排放总量与其总生物量、籽粒产量和收获指数呈显著负相关,而粳型超级稻的相关不显著.籼型超级稻CH₄排放量低主要是由于其根系生物量显著高于粳型超级稻.     

高秆野生稻内生固氮细菌多样性

高秆野生稻(Oryza alta)是一种重要的种质资源, 其组织内也蕴藏着非常宝贵的功能微生物资源。本实验采用无氮培养基, 从高秆野生稻中分离到43株内生固氮菌, 结合乙炔还原法测定其固氮酶活性。经固氮酶基因(nifH)的PCR扩增检测, 43株内生固氮菌代表菌株均能扩增出固氮酶基因片段。利用IS-PCR DNA指纹图谱和SDS-PAGE全细胞蛋白电泳图谱将获得的菌株聚类为6个类群(I、II、III、IV、V、VI)。对各个类群的代表菌株(ZF3, ZF8, ZF13, ZF15, ZF24, ZF43)进行16S rRNA基因序列测定, 结果表明, 类群I属于土生拉乌尔菌(Raoultella terrigena), 类群II属于类肺炎克雷伯氏菌类肺炎亚种(Klebsiella quasipnmoniae subsp. quasipneumoniae), 类群III属于越南伯克氏菌(Burkholderia vietnamiensis), 类群IV的菌株代表肠秆菌属的一个类群(Enterobacter sp.), 类群V的菌株属于门多萨假单胞菌(Pseudomonas mendocina), 类群VI归属于固氮植物菌(Phytobacter diazotrophicus)。Biolog聚类结果与IS-PCR指纹图谱类型及SDS-PAGE全细胞蛋白聚类结果一致。Biolog板测定结果显示, 来自不同类群的代表菌株对碳源的利用差异显著, 说明野生稻内多样的内生固氮菌从环境中获取碳源和氮素的适应能力较强。     

根表铁锰氧化物胶膜对不同品种水稻吸镉的影响

采用土培方法,研究了不同品种水稻吸镉的差异及其与根表铁锰氧化物胶膜的关系,结果表明：不同品种水稻其根膜,根部及地上部含镉量均存在显著性差异,且镉在不同水稻植株体内运输转移能力不同,不同水稻其根表淀积的铁锰氧化物数量也存在显著性差异,根膜及地上部的含镉量与极膜的含铁量均未达到显著性相关,但与根膜的含锰量相关性显著。     

长江三角洲主要超级稻CH4排放特征及其与植株生长特性的关系

采用盆栽试验研究了长江三角洲14个主要超级稻品种(6个粳型超级稻和8个籼型杂交超级稻)CH₄排放特征及其与植株生长特性之间的关系.结果表明: 粳型和籼型超级稻全生育期CH₄排放均呈双峰模式,排放峰值分别出现在分蘖盛期和孕穗期.粳型超级稻的平均CH₄排放总量比籼型超级稻高37.6%(P<0.01),品种间排放差异主要出现在生长后期.虽然两种类型超级稻的CH₄排放总量均与最大叶面积呈显著正相关,但CH₄排放与其他生长特性的关系因品种类型而异.在株高上,粳型超级稻CH₄排放总量与株高呈显著正相关,而籼型超级稻的相关不显著.在生产力上,籼型超级稻CH₄排放总量与其总生物量、籽粒产量和收获指数呈显著负相关,而粳型超级稻的相关不显著.籼型超级稻CH₄排放量低主要是由于其根系生物量显著高于粳型超级稻.     

早籼稻米垩白形成中的生理生化变化特性

以早籼多垩白品种泸红早１号、浙７３３和少垩白品种中优早３号、舟优９０３及中籼中引８５为材料,在自然高温条件下对水稻灌浆过程中胚乳内含物质（如淀粉、可溶性糖等）和酶（淀粉磷酸化酶、Ｑ酶）活性的连续变化进行测定。结果表明,不同垩白度品种其胚乳内部物质增长的时间进程和酶活性的变化存在差异,由此造成灌浆动态明显不同,并导致垩白形成的差异。     

Studies with detached lupin root nodules in culture: I. Maintenance and induction of acetylene reduction activity

A method has been developed for culturing detached nitrogen-fixing root nodules of lupin (Lupinus angustifolius L.) on a simple nutrient medium. Under the best conditions devised, the acetylene reduction activity of mature detached nodules was maintained at 10 to 25 nmoles of ethylene hr⁻¹ mg⁻¹ fresh weight for 3 days. Under the same culture conditions, immature nodules increased their acetylene reduction activity from 0.01 nmole or less to about 1 nmole hr⁻¹ mg⁻¹ fresh weight.     

水稻边缘细胞的生物学特性及对铁毒的响应

以水稻为实验材料,从19个品种中筛选出来相对耐亚铁的水稻品种中优9288和敏感品种汕优10号,研究水稻根边缘细胞的生物学特性及对铁毒的响应.结果表明,第1个水稻边缘细胞几乎与初生根同时出现,当根长为25 mm时,边缘细胞数目最大,分别为1165个(中优9288)、1311个(汕优10号);两个品种边缘细胞活性随着根长的增加而增强,在根长20 mm时活性最强,随着根的进一步伸长,活性下降;根长为2 mm时根冠果胶甲基脂酶(PME)活性最高.随着亚铁溶液浓度的增加,中优9288的边缘细胞数目先增加后减少,当浓度为100 mg/L时达到最大值,汕优10号的边缘细胞数则一直呈现减少趋势;两个品种边缘细胞活性随亚铁溶液浓度增加而降低,当亚铁浓度增加到400 mg/L时,活性有所回升,但当浓度增加到800 mg/L后存活率又下降;根冠PME活性随着亚铁溶液浓度的增加先上升后下降.有关铁毒影响水稻根冠PME活性的机理进行了讨论.