Cloning and sequence analysis of myostatin promoter in sheep.

To better understand the structure and function of the myostatin's gene promoter region in sheep, we cloned and sequenced a 1.517 kb fragment containing the 5'-regulatory region of the sheep myostatin gene (GenBank accession number is AY918121). The promoter sequence consists of three TATA boxes, one CAAT box, and eight putative E-boxes. Some putative muscle growth response elements for Octamer-binding factor 1(Octamer), Activator protein 1(AP1), Growth factor independence 1 zinc finger protein (Gfi-1B), Myocyte enhancer factor 2 (MEF2), Muscle-specific Mt binding site (MTBF), Glucocorticoid response elements (GRE) and Progesterone receptor binding site (PRE) were detected. Some of the motifs are conserved as compared to with that in the goat, bovine and porcine myostatin promoters. However, some differences were also found.     

The myostatin gene is a downstream target gene of basic helix-loop-helix transcription factor MyoD

Myostatin is a negative regulator of myogenesis, and inactivation of myostatin leads to heavy muscle growth. Here we have cloned and characterized the bovine myostatin gene promoter. Alignment of the upstream sequences shows that the myostatin promoter is highly conserved during evolution. Sequence analysis of 1.6 kb of the bovine myostatin gene upstream region revealed that it contains 10 E-box motifs (E1 to E10), arranged in three clusters, and a single MEF2 site. Deletion and mutation analysis of the myostatin gene promoter showed that out of three important E boxes (E3, E4, and E6) of the proximal cluster, E6 plays a significant role in the regulation of a reporter gene in C(2)C(12) cells. We also demonstrate by band shift and chromatin immunoprecipitation assay that the E6 E-box motif binds to MyoD in vitro and in vivo. Furthermore, cotransfection experiments indicate that among the myogenic regulatory factors, MyoD preferentially up-regulates myostatin promoter activity. Since MyoD expression varies during the myoblast cell cycle, we analyzed the myostatin promoter activity in synchronized myoblasts and quiescent "reserve" cells. Our results suggest that myostatin promoter activity is relatively higher during the G(1) phase of the cell cycle, when MyoD expression levels are maximal. However, in the reserve cells, which lack MyoD expression, a significant reduction in the myostatin promoter activity is observed. Taken together, these results suggest that the myostatin gene is a downstream target gene of MyoD. Since the myostatin gene is implicated in controlling G(1)-to-S progression of myoblasts, MyoD could be triggering myoblast withdrawal from the cell cycle by regulating myostatin gene expression.     

Cloning and functional analysis of sheep U6 promoters

Gene silencing mediated by small interfering RNA has become a powerful biological tool for the regulation of gene expression. In order to develop an effective short hairpin RNA (shRNA) expression vector, specifically for use in sheep species, we have identified two sheep U6 promoters based on the highly conserved polymerase III promoter elements. Promoter activity was measured by U6 promoter-driven shRNA to suppress enhanced green fluorescent protein (EGFP) expression. The knock down assay demonstrated that the two sheep U6 promoters and mouse U6 promoter induced a similar level of EGFP knockdown. These results suggest that the two sheep U6 promoters could efficiently drive shRNA expression for gene silencing and may have applications in RNAi-based sheep research.     

Single nucleotide polymorphisms in the upstream regulatory region alter the expression of myostatin

The expression of the gene encoding myostatin (MSTN), the product of which is a negative regulator of skeletal muscle growth and development in mammals, is regulated by many cis-regulatory elements, including enhancer box (E-box) motifs. While E-box motif mutants of MSTN exhibit altered expression of myostatin in many animal models, the phenotypes of these mutations in chicken are not investigated. In this study, we cloned and sequenced the full encoded DNA sequence of MSTN gene and its upstream promoter region in Wenshang Luhua chicken breed. After analysis of the sequence, 13 E-box motifs were identified in the MSTN promoter region, which were denoted by E1 to E13 according to their positions in the region. Although many single nucleotide polymorphisms (SNPs) were revealed in the MSTN promoter region, only two SNPs were in the E-boxes, i.e., the first nucleotide of the E3 and the fifth nucleotide of E4. The effects of these two polymorphisms on the expression of MSTN gene were explored both with MSTN-GFP reporter constructs in vitro and real-time PCR in vivo. The results suggested that the E-boxes in the chicken MSTN promoter region are involved in the regulation of myostatin expression and the polymorphisms in E3 and E4 altered the expression of myostatin.     

羊FSHR基因5′端转录启动调控区生物学特性

文章对小尾寒羊、滩羊和澳洲绵羊等繁殖性状不同的3种绵羊与排卵有关的FSHR基因5′端转录启动调控区进行了克隆和分析,通过对FSHR基因的15个转录调控元件序列进行比较,结果表明,羊不同品种FSHR基因的转录调控元件序列之间没有差异。这说明绵羊的品种与FSHR基因5′端转录启动调控区的相关性不强,排除了因转录调控元件突变而影响转录调节能力的可能性。      

Stra 8基因的激活与精原干细胞的特异性分化研究

视黄酸对维持正常的雄性睾丸结构和功能起着重要的作用。近来的研究发现,在雄性生殖腺发育过程中有一组基因,它们可以被视黄酸特异性的诱导活化,称为Stra(Stimulated by Retinoic Acid)基因。从鼠源分离得到的Stra8基因编码一种细胞质蛋白,该基因只特异性的在成熟雄性生殖细胞中表达,其功能被认为与精子形成有关。为研究Stra8基因的表达特性,我们从小鼠的基因组中克隆了Stra8基因的启动子序列(1.4kb)。将Stra8基因的1.4kb启动子序列克隆到pEGFP-1载体的EGFP基因之前,构建成由Stra8基因1.4kb启动子序列调控表达绿色荧光蛋白的pStra8-EGFP载体。将其分别转化到不同类型的细胞中,如小鼠ES-129细胞、人胎儿胰腺干细胞、小鼠骨髓间充质干细胞和小鼠精原干细胞等,通过荧光显微镜观察发现,绿色荧光蛋白只在小鼠精原干细胞中表达,表明Stra8基因是组织特异性表达的基因。将pStra8-EGFP转化小鼠骨髓间充质干细胞,经G418筛选2周后,用视黄酸诱导,12h培养后,有一部分转化pStra8-EGFP载体的细胞表达绿色荧光蛋白。RT-PCR证明这些细胞中有精原干细胞特异表达基因Stra8的转录,还有生殖细胞特异表达基因CyclinA8和Oct4的转录,这些结果说明小鼠骨髓间充质细胞经视黄酸的诱导可以向生殖细胞方向分化。     

利用Tol2转座子构建斑马鱼心脏组织特异表达转基因载体及其表达分析

为了制备用于在斑马鱼心脏中特异表达目的基因的转基因载体,通过分子克隆的方法对能够在斑马鱼心脏中特异表达EGFP报告基因的Tol2载体进行了改造,在原有的CMLC2启动子与EGFP编码区之间插入带有多克隆位点的IRES序列,获得pTol2-CMLC2-IRES-EGFP转基因表达载体,该载体可以实现在同一个启动子CMLC2的驱动下分别同时表达目的基因和EGFP;为了验证该表达载体的有效性,进一步在CMLC2启动子与IRES序列之间插入DsRed-Monome编码区,利用得到的pTol2-CMLC2-RED-IRES-EGFP转基因载体显微注射到斑马鱼单细胞期胚胎中进行表达分析,结果表明外源目的基因DsRed-Monome和报告基因EGFP均能以相同的表达模式在斑马鱼心脏组织中特异表达。pTol2-CMLC2-IRES-EGFP转基因表达载体的成功构建对于建立心脏发育候选基因的斑马鱼转基因实验模型具有重要意义。     

人NFBD1启动子的鉴定与初步分析

NFBD1,也称MDC1,是一个参与细胞内DNA损伤后细胞应答反应的重要分子.为了进一步深入研究其转录调控机制,本研究克隆鉴定了NFBD1的启动子.首先应用5′ RACE技术鉴定了NFBD1的转录起始位点,首次发现NFBD1至少存在3种丰度和转录起始位点不同的转录变异体.然后,通过PCR定向克隆和酶切亚克隆策略,构建了覆盖NFBD1基因5′侧翼区起始密码子ATG上游5 kb区域的一系列NFBD1启动子荧光素酶报告基因重组体.启动子活性分析表明,NFBD1启动子区域定位于主要转录起始位点区域附近1.5 kb的区域内.采用转录因子结合位点预测分析软件分析表明,NFBD1启动子缺乏TATA盒,但含有典型的CCAAT盒和GC盒以及其它潜在的转录因子结合位点,提示Sp1和NF-Y等转录因子可能参与NFBD1的转录调控     

獐茅HAK基因表达调控区的分离及其在水稻中的功能分析

獐茅高亲和性K+转运蛋白基因(AlHAK1)是从单子叶禾本科盐生植物獐茅(Aeluropus littoralis(Gouan)Parl)中克隆,对于细胞营养和离子渗透调节起关键作用。为了进一步了解AlHAK1基因的表达调控机制,文章采用基因组步移法分离了AlHAK1基因转录起始位点上游长度约1.3 kb的启动子区域。启动子顺式元件分析显示该序列具有典型的TATA和CAAT盒,以及一些与植物生长发育和环境响应相关的顺式元件。为了明确AlHAK1启动子的功能,将其与GUS基因融合构建到植物表达载体pCAMBIA1301上,通过农杆菌介导转化法导入水稻中。对转基因植株进行GUS组织化学染色,结果显示在转化AlHAK1启动子水稻的根、茎、叶、花药和内外稃部位均检测到GUS活性。GUS荧光定量分析显示AlHAK1启动子调节GUS表达活性低于组成型启动子CaMV35S和Ubiquitin,但其根部和茎部的GUS活性相对较高。对转化植株进行不同胁迫处理后检测GUS活性,结果表明受到ABA、干旱、高温的诱导后其茎部和根部GUS活性有所提高,推测位于该启动子-682 bp的HSE元件和-1 268 bp的MybBS元件可能在高温、ABA和干旱诱导的表达调控中起作用。