Assessing the longitudinal structure of the early hominid foot: A two-dimensional architecture analysis

Early hominid feet are often very fragmentary preserved and their architectural approaches stayed limited and subject to controversy. This study proposes an architectural analysis of the primate foot realised on dislocated skeleton. It is based on the angular analysis of geometrical relationships between the joint areas. We investigate the longitudinal structure of the primate foot and we present the results concerning someAustralopithecus afarensis specimens from Hadar (Ethiopia) and theHomo habilis Olduvai Hominid 8 foot (Tanzania). The architectural analysis argues for the lack of a longitudinal medial arch inA. afarensis, their joints being in neutral position. On the contrary, the more recent OH8 specimen is arched both medially and laterally.     

Mapping the knowledge structure of research on patient adherence: knowledge domain visualization based co-word analysis and social network analysis

Background

Patient adherence is an important issue for health service providers and health researchers. However, the knowledge structure of diverse research on treatment adherence is unclear. This study used co-word analysis and social network analysis techniques to analyze research literature on adherence, and to show their knowledge structure and evolution over time.

Methods

Published scientific papers about treatment adherence were retrieved from Web of Science (2000 to May 2011). A total of 2308 relevant articles were included: 788 articles published in 2000–2005 and 1520 articles published in 2006–2011. The keywords of each article were extracted by using the software Biblexcel, and the synonym and isogenous words were merged manually. The frequency of keywords and their co-occurrence frequency were counted. High frequency keywords were selected to yield the co-words matrix. Finally the decomposition maps were used to comb the complex knowledge structures.

Results

Research themes were more general in the first period (2000 to 2005), and more extensive with many more new terms in the second period (2006 to 2011). Research on adherence has covered more and more diseases, populations and methods, but other diseases/conditions are not as hot as HIV/AIDS and have not become specialty themes/sub-directions. Most studies originated from the United States.

Conclusion

The dynamic of this field is mainly divergent, with increasing number of new sub-directions of research. Future research is required to investigate specific directions and converge as well to construct a general paradigm in this field.     

Recent knowledge and innovations related to hexofuranosides: structure, synthesis and applications

Hexofuranosides are widely spread in nature, and notably in numerous pathogenic microorganisms. This particular five-membered ring for hexosides leads to novel biological properties and, as usual in glycochemistry, to completely different reactivity and selectivity. Far from being exhaustive, this review will first focus on the structure of the oligosaccharidic part of hexofuranosyl conjugates found in natural sources. Original syntheses will then be presented, stressing more particularly on the development of chemical and chemo-enzymatic tools for the access to 1,2-trans or 1,2-cis linkages. Finally, innovative applications related to biological, chemical and physicochemical fields for both natural and synthetic hexofuranosyl compounds will be described.     

The impact of widowhood on wellbeing,health, and care use: A longitudinal analysis across Europe

ObjectiveTo estimate whether becoming widowed had a significant effect on individual’s health status as well as on healthcare and non-healthcare resources use, compared to people who remained in a couple in Europe.Data and methodIt was used the Survey of Health, Aging and Retirement in Europe from 2004 to 2015. The statistical technique used was genetic matching which analysed the differences in wellbeing, mental health, health status, risk of death, health care resources and long-term care utilization of people who have become widowed, comparing with people who remained married or with a partner. We considered shortterm and medium-term effects.ResultsIn the short term, those who became widowed had a worse wellbeing and mental health, in addition to a greater probability of receiving formal care and informal care from outside the household. There seems to be a significant effect in the use of formal and informal care from outside the household in the medium term.ConclusionsThe results might help to concentrate a major effort of any policy or strategy, not only in the field of health but also in the provision of long-term care, immediately after the negative shock occurs.     

The consequences of spatial structure for the design and analysis of ecological field surveys

In ecological field surveys, observations are gathered at different spatial locations. The purpose may be to relate biological response variables (e.g., species abundances) to explanatory environmental variables (e.g., soil characteristics). In the absence of prior knowledge, ecologists have been taught to rely on systematic or random sampling designs. If there is prior knowledge about the spatial patterning of the explanatory variables, obtained from either previous surveys or a pilot study, can we use this information to optimize the sampling design in order to maximize our ability to detect the relationships between the response and explanatory variables?
The specific questions addressed in this paper are: a) What is the effect (type I error) of spatial autocorrelation on the statistical tests commonly used by ecologists to analyse field survey data? b) Can we eliminate, or at least minimize, the effect of spatial autocorrelation by the design of the survey? Are there designs that provide greater power for surveys, at least under certain circumstances? c) Can we eliminate or control for the effect of spatial autocorrelation during the analysis? To answer the last question, we compared regular regression analysis to a modified t‐test developed by Dutilleul for correlation coefficients in the presence of spatial autocorrelation.
Replicated surfaces (typically, 1000 of them) were simulated using different spatial parameters, and these surfaces were subjected to different sampling designs and methods of statistical analysis. The simulated surfaces may represent, for example, vegetation response to underlying environmental variation. This allowed us 1) to measure the frequency of type I error (the failure to reject the null hypothesis when in fact there is no effect of the environment on the response variable) and 2) to estimate the power of the different combinations of sampling designs and methods of statistical analysis (power is measured by the rate of rejection of the null hypothesis when an effect of the environment on the response variable has been created).
Our results indicate that: 1) Spatial autocorrelation in both the response and environmental variables affects the classical tests of significance of correlation or regression coefficients. Spatial autocorrelation in only one of the two variables does not affect the test of significance. 2) A broad‐scale spatial structure present in data has the same effect on the tests as spatial autocorrelation. When such a structure is present in one of the variables and autocorrelation is found in the other, or in both, the tests of significance have inflated rates of type I error. 3) Dutilleul's modified t‐test for the correlation coefficient, corrected for spatial autocorrelation, effectively corrects for spatial autocorrelation in the data. It also effectively corrects for the presence of deterministic structures, with or without spatial autocorrelation.
The presence of a broad‐scale deterministic structure may, in some cases, reduce the power of the modified t‐test.     

The structure of carbohydrate chains of blood-group substance. Isolation and elucidation of the structure of higher oligosaccharides from blood-group substance H

Twenty individual higher reduced oligosaccharides, having from seven to eleven monosaccharide units, were isolated after sodium borohydride degradation of blood-group substance H from pig stomach linings. Anion-exchange high-pressure liquid chromatography appears to be a very convenient and effective method for this kind of higher oligosaccharide mixtures separation. The oligosaccharide structures were determined by means of periodate oxidation, methylation analysis, partial acid and enzymic hydrolysis. It has been found that all the oligosaccharides investigated can be divided into four series. The oligosaccharides belonging to each series have the common oligosaccharide fragment to which terminal L-fucose and/or N-acetyl-D-glucosamine residues are attached. Comparison of all the oligosaccharide structures, including tri, penta and hexasaccharides described earlier, shows that the lower oligosaccharides represent the structural element of the higher oligosaccharides.     

褐飞虱遇险释放挥发性物质的提取及成分分析

利用Y型嗅觉仪测定不同试验条件下褐飞虱Nilaparvata lugens(Stl)对同类昆虫遭遇草间小黑蛛Erigonidium graminicolum Sundvall捕食时挥发性物质的行为反应,并利用固相微萃取、气相色谱与质谱技术分离鉴定挥发性物质。目的明确褐飞虱遇险释放挥发性物质的最佳提取条件,并分析该挥发性物质的成分。结果表明,用乙酸乙酯、甲醇和正己烷分别提取"褐飞虱2³龄若虫+草间小黑蛛成蛛"共存体释放的挥发性物质,发现乙酸乙酯提取物能引起褐飞虱极显著的逃避行为。用不同褐飞虱虫量(100、300、600头/500 mL瓶)、不同提取时间(1、3、6 h)和不同溶剂温度(15、25、35℃)分别提取"褐飞虱23龄若虫+草间小黑蛛成蛛"共存体释放的挥发性物质,发现乙酸乙酯提取物能引起褐飞虱极显著的逃避行为。用不同褐飞虱虫量(100、300、600头/500 mL瓶)、不同提取时间(1、3、6 h)和不同溶剂温度(15、25、35℃)分别提取"褐飞虱2³龄若虫+草间小黑蛛成蛛"共存体释放的挥发性物质,发现3003龄若虫+草间小黑蛛成蛛"共存体释放的挥发性物质,发现300⁶00头、3600头、3⁶ h和25℃下的提取物能引起褐飞虱极显著的逃避行为,明确了褐飞虱遇险释放挥发性物质的最佳提取条件。利用固相微萃取法分别萃取"褐飞虱26 h和25℃下的提取物能引起褐飞虱极显著的逃避行为,明确了褐飞虱遇险释放挥发性物质的最佳提取条件。利用固相微萃取法分别萃取"褐飞虱2³龄若虫"释放的挥发性物质和"褐飞虱23龄若虫"释放的挥发性物质和"褐飞虱2³龄若虫+草间小黑蛛成蛛"共存体释放的挥发性物质。气相色谱分析表明,保留时间16 min、21.5 min时,"褐飞虱"与"褐飞虱+草间小黑蛛"共存体释放的挥发物均出现新峰;保留时间10.94 min时,仅"褐飞虱+草间小黑蛛"共存体释放的挥发物出现新峰。推测保留时间10.94 min时出现的峰为褐飞虱被草间小黑蛛捕食时释放的示警挥发物。质谱分析进一步表明,这种挥发物具有与(E)-2-己烯醛相类似的化学结构,但其实际结构还需深入研究。     

The effectiveness of the longitudinal field,coupled with depolarization in activating frog twitch muscles

EFFECTIVE EXCITATION, PRECEDING THE MECHANICAL RESPONSE IN FROG TWITCH MUSCLES, INVOLVES TWO DISTINCT EVENTS: depolarization of the excitable membrane and the flow of internal currents. To distinguish between the effects of these two potential factors in activation of the contractile machinery, experiments ought to be conducted in which one or the other is excluded. Our experiments are designed to distinguish between these effects by indirect methods. Depolarization in a longitudinal electric field can be expected to be greatest at the ends where current leaves the muscle fibers (space constant at [K] = 16 mM/liter is >1 mm.), whereas the internal longitudinal current is known to be greatest in the middle portion. Depolarization, therefore, should affect the ends more strongly and internal current the middle portion. Our experiments show that non-propagating frog twitch muscles shorten, during isotonic work, along their whole length and not only at their ends, when effectively stimulated in a longitudinal A.C. field. At a field strength about twice the new threshold value (at [K](o) = 16 mM) shortening is distinctly greater in the middle portion of the muscle than at the ends. The muscles, although temporarily non-propagating, remain intact throughout the experiment, as demonstrated by complete recovery after repolarization. These findings may be taken as an indication that internal currents are more directly linked to activation than is depolarization, but the latter is an essential priming step, which must precede or coincide with effective current flow.     

IMPALA: A simple restraint field to simulate the biological membrane in molecular structure studies

The lipid bilayer is crucial for the folding of integral membrane proteins. This article presents an empirical method to account for water–lipid interfaces in the insertion of molecules interacting with bilayers. The interactions between the molecule and the bilayer are described by restraint functions designed to mimic the membrane effect. These functions are calculated for each atom and are proportional to the accessible surface of the latter. The membrane is described as a continuous medium whose properties are varying along the axis perpendicular to the bilayer plane. The insertion is analyzed by a Monte Carlo procedure applied to the restraint functions. The method was successfully applied to small α peptides of known configurations. It provides insights of the behaviors of the peptide dynamics that cannot be obtained with statistical approaches (e.g., hydropathy analysis). Proteins 30:357–371, 1998. © 1998 Wiley-Liss, Inc.     

The significance of D-amino acids in soil, fate and utilization by microbes and plants: review and identification of knowledge gaps

Background

D-amino acids are far less abundant in nature than L-amino acids. Both L- and D-amino acids enter soil from different sources including plant, animal and microbial biomass, antibiotics, faeces and synthetic insecticides. Moreover, D-amino acids appear in soil due to abiotic or biotic racemization of L-amino acids. Both L- and D-amino acids occur as bound in soil organic matter and as “free“ amino acids dissolved in soil solution or exchangeably bound to soil colloids. D-amino acids are mineralized at slower rates compared to the corresponding L-enantiomers. Plants have a capacity to directly take up “free“ D-amino acids by their roots but their ability to utilize them is low and thus D-amino acids inhibit plant growth.

Scope

The aim of this work is to review current knowledge on D-amino acids in soil and their utilization by soil microorganisms and plants, and to identify critical knowledge gaps and directions for future research.

Conclusion

Assessment of “free“ D-amino acids in soils is currently complicated due to the lack of appropriate extraction procedures. This information is necessary for consequent experimental determination of their significance for crop production and growth of plants in different types of managed and unmanaged ecosystems. Hypotheses on occurrence of “free“ D-amino acids in soil are presented in this review.     

The structure of myostatin:follistatin 288: insights into receptor utilization and heparin binding

Myostatin is a member of the transforming growth factor‐β (TGF‐β) family and a strong negative regulator of muscle growth. Here, we present the crystal structure of myostatin in complex with the antagonist follistatin 288 (Fst288). We find that the prehelix region of myostatin very closely resembles that of TGF‐β class members and that this region alone can be swapped into activin A to confer signalling through the non‐canonical type I receptor Alk5. Furthermore, the N‐terminal domain of Fst288 undergoes conformational rearrangements to bind myostatin and likely acts as a site of specificity for the antagonist. In addition, a unique continuous electropositive surface is created when myostatin binds Fst288, which significantly increases the affinity for heparin. This translates into stronger interactions with the cell surface and enhanced myostatin degradation in the presence of either Fst288 or Fst315. Overall, we have identified several characteristics unique to myostatin that will be paramount to the rational design of myostatin inhibitors that could be used in the treatment of muscle‐wasting disorders.