A re-evaluation of Hypochnicium (Polyporales) based on morphological and molecular characters

Hypochnicium is a genus of corticioid, wood-inhabiting fungi in the Polyporales with a worldwide distribution. The genus has been characterized by the nature of the spores; they are thick-walled, smooth or ornamented, and cyanophilous. Nine new ITS nrDNA sequences from species of this genus were aligned with 32 sequences from GenBank, and phylogenetic analyses were performed. Six clades were determined within the genus; one contains taxa with smooth spores, and the other three with ornamented spores. Hypochnicium versatum must be included in Gloeohypochnicium, and the new combination Gloeohypochnicium versatum is proposed. Two new species, Hypochnicium michelii from Spain and Hypochnicium guineensis from Equatorial Guinea, are described.     

CHROMOSOME NUMBERS IN CUPHEA (LYTHRACEAE): NEW COUNTS AND A SUMMARY

The American genus Cuphea with ca. 260 species is extremely diverse with respect to chromosome number. Counts are now available for 78 species and/or varieties, or 29% of the genus. Included in this study are first reports for 15 taxa from Brazil, Cuba, Dominican Republic, Mexico, and Venezuela. Twenty-two different numbers are known for the genus, ranging from n = 6 to n = 54. The most common number in the primary center of species diversity in Brazil is n = 8, which is regarded as the base number of the genus. Two numbers are most common in the secondary center in Mexico, n = 10 and n = 12. Species with n = 14 or higher are considered to be of polyploid origin. Polyploids comprise 46% of the total species counted and appear in 9 of the 11 sections for which chromosome numbers have been reported. Aneuploid species comprise ca. 25% of the genus and are known from 7 of the 11 sections. The two subgenera are not characterized by different chromosome numbers or sequences of numbers. None of the 14 sections are circumscribed by a single chromosome number. Morphological and ecological variability in widespread, weedy species is correlated with differing chromosome numbers in some species whereas in others the chromosome number is stable. Summary of chromosome numbers by taxonomic section is presented. Section Euandra, centered in eastern Brazil, and the largest section of the genus, appears to be chromosomally most diverse. In section Trispermum, characterized by difficult, variable species with intermediate forms, two of the four species studied have polyploid races. Section Heterodon, endemic to Mexico and Central America and comprising most of the annual species of the genus, is best known chromosomally. Chromosome numbers have been counted for 25 of 28 species, and 12 different numbers are reported. The most advanced sections, Melvilla and Diploptychia, with numerous species occurring at higher altitudes, are characterized by high polyploids. Apomictic species occur in sect. Diploptycia. The cytoevolution of Cuphea is complex with frequent polyploid and aneuploid events apparently playing a significant role in speciation in both centers of diversity.     

Correlation between phylogenetic structure and function: examples from deep-sea Shewanella

The genus Shewanella is one of the typical deep-sea bacterial genera. Two isolated deep-sea Shewanella species, Shewanella benthica and Shewanella violacea, were found to be able to grow better under high hydrostatic pressure conditions than at atmospheric pressure. These species are not only piezophilic (barophilic), but also psychrophilic. Many psychrophilic and psychrotolerant Shewanella species have been isolated and characterized from cold environments, such as seawater in Antarctica or the North Sea. Some of these cold-adapted Shewanella were shown to be piezotolerant, meaning that growth occurs in a high-pressure habitat. In this review, we propose that two major sub-genus branches of the genus Shewanella should be recognized taxonomically, one group characterized as high-pressure cold-adapted species that produce substantial amounts of eicosapentaenoic acid, and the other group characterized as mesophilic pressure-sensitive species.     

Three new genera representing novel lineages of Sordariomycetidae (Sordariomycetes, Ascomycota) from tropical freshwater habitats in Costa Rica

Three new genera are established in the Sordariomycetidae based on morphological and molecular data (SSU and LSU nrDNA) to accommodate five ascomycete species collected from submerged woody debris in freshwater habitats from Costa Rica. The genus Bullimyces contains three new species, B. communis, B. costaricensis and B. aurisporus. Bullimyces is characterized by globose to subglobose, membranous, black, ostiolate ascomata; deliquescent, hyaline, globose cells that fill the center of the centrum; unitunicate asci that deliquesce early in some species; and septate, thick-walled ascospores with or without gelatinous sheaths or appendages. Bullimyces species form a well supported clade with 100% bootstrap support, but the position of the genus in the Sordariomycetidae remains unclear. The second genus, Riomyces, is represented by a single species, R. rotundus. Riomyces is characterized by globose to subglobose, membranous, black, ostiolate ascomata, unitunicate, cylindrical asci, hyaline, globose cells that fill the hamathecium and septate, thick-walled ascospores with a gelatinous sheath. Although Riomyces is morphologically similar to Bullimyces, the two genera did not group together with support in any analysis. The third genus, Hydromelitis, is represented by a single species, H. pulchella. Hydromelitis is characterized by pyriform, membranous, black, ostiolate ascomata, unitunicate asci lacking an apical structure, simple, thin-walled, septate paraphyses and hyaline to golden yellow, multiseptate, thick-walled ascospores with a gelatinous sheath. Bullimyces, Riomyces and Hydromelitis were nested within an unsupported clade consisting of members of the Ophiostomatales, Magnaporthales and freshwater Annulatacaceae sensu lato and sensu stricto.     

中国大翼甲螨科一新记录属及其一新种（甲螨亚目：大翼甲螨科）

首次报道囊大翼甲螨属Sacculogalumna Engelbrecht, 1973在我国分布,并记述了该属采自贵州省绥阳县宽阔水国家级自然保护区的1新种:绥阳囊大翼甲螨 Sacculogalumna suiyangensis sp. nov.。该新种的主要区别特征为:梁间毛短或缺失;感器细长,光滑,感器头微微膨大,呈纺锤状;后背板毛明显;肛后孔区小,圆形。附有该新种与该属其他种类的区别对照表。模式标本保存于贵州大学昆虫研究所。     

中国东部暖温带地区土壤中的皮司霉属(丝孢纲)真菌

报道从中国东部暖温带地区诸省(市)土壤中分离到的皮司霉属Pithomyces真菌的两个新种:长棒孢皮司霉Pithomyces longiclavisporus和淡色皮司霉Pithomyces pallidus,及两个中国新记录种:卡罗皮司霉Pithomyces karoo和帕夫皮司霉Pithomyces pavgii;对另外三个已知种亦作了分离地点和生境的引证。研究过的标本(干制培养物)与活菌种保存在山东农业大学植物病理学标本室(HSAUP)。     

A revision of Rhynchanthera (Melastomataceae)

The neotropical genus Rhynchanthera (Melastomataceae, Microlicieae) is revised, and 15 of the 84 proposed taxa are recognized; two species are excluded from the genus. The group consists of subshrubs and shrubs with usually purple flowers in thyrsoid inflorescences of uniparous or biparous cymes. It is characterized by androecia with five antepetalous staminodia in addition to the five fertile stamens, and - in most species - dimorphism of the stamens, with one strikingly longer than the other four. The plants always are covered by at least some simple glandular hairs. The majority of the species of Rhynchanthera occur in south-central Brazil, however, the range of the genus extends from southern Mexico to Bolivia and Paraguay. All species grow in wet places in open scrub or savanna vegetation. Micromorphological features of the seeds have been investigated and support the traditional placement of Rhynchanthera in the Microlicieae where it is closest to Microlicia, Lavoisiera , and Trembleya. Two taxa are illustrated with drawings, and the distribution of all is mapped.     

<Emphasis Type="Italic">Choanocystis antarctica</Emphasis> sp. n., a new heliozoan (Centrohelida) species from the littoral zone of King George Island,South Shetland Islands,Antarctica

The morphology of a new marine heliozoan from the sandy littoral of King George Island (the South Shetland Islands, Antarctica) is described. The species is characterized by bent or curved spicules with a spur at the shaft bend point. Similarities and differences between the new species and other representatives of the genus Choanocystis are considered.     

A new species of Opisthioglyphe (Trematoda: Telorchiidae) from gall bladder of turtles in Malaysia

Opisthioglyphe sharmai n. sp. is described from the gall bladder of the Malayan box turtle, Cuora amboinensis, and the black marsh turtle, Siebenrockiella crassicollis, in Malaysia. The new species is morphologically similar to Opisthioglyphe ranae and some other members of the genus parasitic in amphibians and reptiles. Opisthioglyphe sharmai n. sp. is easily differentiated from all other members of the genus by the cirrus sac extending posterior to the ventral sucker, while in all previously known species the cirrus sac is entirely or mostly preacetabular with the base of the structure not reaching beyond mid-line of the ventral sucker. Despite the overall stable morphology, O. sharmai n. sp. is characterized by highly variable arrangement of testes, from tandem to opposite. It is only the second representative of the genus described from turtles and the first species of Opisthioglyphe parasitic in gall bladder, while all previously described members of the genus are parasitic in the intestine of their hosts.     

Discovery of the second species of Pseudohypocrea (Hypocreaceae)

A new species of the monotypic genus Pseudohypocrea is described based on a collection from Tai Po Kau, Hong Kong, China. The fungus is characterized by globose to subglobose perithecia entirely immersed in a pulvinate reddish-brown stroma, cylindrical asci with smooth-walled and lemon-shaped part-ascospores, and occurring on dead leaves. Morphological features of the new species are described and compared with the only known species of the genus.poi     

Complete genome sequence of Deinococcus maricopensis type strain (LB-34)

Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococcus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus-Thermus. Strain LB-34(T) was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geothermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these species adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. maricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.     

Two new species ofConiochaeta with a cephalothecoid peridium wall

Two new species ofConiochaeta, isolated from Japanese soils, are described and illustrated:C. cephalothecoides, which is characterized by dark brown ascomata clothed with short setae, cylindrical asci and ovoid to almond-shaped or pyriform ascospores with a longitudinal germ slit; andC. dumosa, which is characterized by dark brown ascomata clothed with short setae and dense hyphal hairs, cylindrical asci and ellipsoid-fusoid ascospores with a longitudinal germ slit. These species are distinguished from most species of the genus by the unique cephalothecoid peridium of their ascomata. The associated anamorphs of both species are assignable to the form-genusLecythophora.     

Stromatonectria gen. nov. and notes on Myrmaeciella

Myrmaeciella caraganae was recollected in and around Vienna, Austria and found to be morphologically different generically from the type species of Myrmaeciella, M. endoleuca. We redescribe M. caraganae in the new genus Stromatonectria. Phylogenetic analyses of LSU sequences place the genus in the Bionectriaceae, Hypocreales. S. caraganae occurs on branches of Caragana spp., Colutea arborescens and Laburnum anagyroides of the Fabaceae. It is characterized by spheroid perithecia partly or entirely immersed in a Hypocrea-like stroma, a Nectria-like centrum and bicellular hyaline ascospores. Conidia of S. caraganae are produced in compound pycnidia that are formed prior to or in association with perithecia. Sporodochia but no pycnidia are formed in culture. We discuss the genus Myrmaeciella and compare S. caraganae with species of the Nectriaceae, including Nectria balansae, N. eustromatica and N. paraguayensis.     

中国小木层孔菌属研究

小木层孔菌属的种类在我国共有7种,其中芳香小木层孔菌Phellinidium fragrans为中国首次报道,该种发现于吉林省长白山自然保护区,与同属其它种的区别是子实体多年生、平伏、具有芳香气味,其担孢子在同属的种类中最小,菌肉中具有形状不规则的厚垣孢子。根据中国的材料对这个种进行了详细描述和显微结构绘图。给出了该属种类的检索表,并将每种孢子统计数据列在检索表中。     

广西地衣新记录属——炭刺文衣属

该文报道了文字衣科(Graphidaceae)地衣一广西新记录属——炭刺文衣属(Carbacanthographis).该属主要特征是子囊盘面闭合,果壳炭化,盘唇具白色粉霜层,类缘丝具疣,子囊孢子砖壁型或横隔双透镜型,I-或微I+.枯炭刺文衣,标本采自广西金秀圣堂山,该种特征是线盘明显、盘被两侧炭化、子囊孢子无色砖壁型、孢子大小(12.5-20)×(5-7.5)μm、地衣体含有水杨嗪酸.该属是中国稀有属,迄今仅有1种报道.该种首次在内陆自然环境中发现,这对于炭刺文衣属及其类群的区系研究、物种保护和利用具有很重要的意义.     

A mini review on the antimicrobial peptides isolated from the genus <Emphasis Type="Italic">Hylarana</Emphasis> (Amphibia: Anura) with a proposed nomenclature for amphibian skin peptides

Hylarana is a well established frog genus coming under the family Ranidae. An increasing number of antimicrobial peptides have been isolated and characterized from the skin of frogs of this genus. This review covers the antimicrobial peptides reported so far from the frogs of Hylarana genus and to propose a consistent system of nomenclature for amphibian skin peptides. Multiple sequence alignment of the skin peptides from Hylarana genus has grouped them into six peptide families, and three bioactive peptides. Existing nomenclature of amphibian antimicrobial peptides is species centered with no implication to the genus which can lead to disparities, when frogs with same species name belonging to different genus have to be named. As per the proposed system the peptide should have the parent peptide name (e.g. Brevinin-1) followed by two uppercase letter of the genus, if two genera begin with the same letter–first letter should be the same followed by an appropriate second letter (e.g. HU for Huia and HM for Humenerana). This is succeeded by species name in lower case-orthologous peptides from different species may be characterized by the initial letter of that species, when two species begin with the same initial letter, second letter should be used appropriately (e.g. HLat for Hylarana aurata and HLan for Hylarana aurantiaca). Paralogs belonging to the same peptide family are assigned by numbers.     

Two new unusual Leucoagaricus species (Agaricaceae) from tropical China with blue-green staining reactions

Most species of the genus Leucoagaricus have been described from temperate regions in North America and Europe, but little is known about the genus from tropical areas. In this report we describe two new species of Leucoagaricus, namely La. flavovirens and La. atroazureus, from tropical China. The two species are characterized by turning blue-green or dark blue where bruised and by unique phylogenetic placement. Two new combinations, namely La. viriditinctus and La. caerulescens, are proposed. A collection examined and cited under the name of La. viridiflavus by Kumar & Manimohan (2009b), who designated the neotype of the species, (Petch) TKA Kumar & Manimohan, was found to differ from La. flavovirens based on morphology and ITS sequence comparison. [corrected] A monophyletic group of four bluing species from Old World tropics is recovered but with poor measures of branch     

Five new species of Zingiber (Zingiberaceae) from Borneo

Recent collections from Sabah and Sarawak have revealed a wide species diversity among the Bornean members of the genus Zingiber. Four previously unknown and one incompletely known species of the genus are presented. Z. vinosum is a lowland species characterized by its burgundy colour of the lower surface of the leaves. Z. lambii was collected in primary lowland forest on ultramafic soil while Z. argenteum was collected in primary lowland forest on limestone. Both are characterized by their silvery leaves and orange inflorescences. Z. pendulum, found in primary mountain forest, has pending leafy stems and a deeply split labellum with very well developed side-lobes. Z. latifolium, found in secondary mountain forest, is vegetatively distinct by its broad leaves with a densely pubescent margin Z. vinosum, Z. Iambii, Z. pendulum and Z. latifolium are from Sabah and Z. argenteum is from Sarawak.