A key phase in the recruitment dynamics of coral reef fishes: post-settlement transition

Synopsis Recent studies of recruitment dynamics in demersal fishes have placed major emphasis on presettlement mortality, and little on events bridging late larval and early juvenile periods. Observations on 68 taxa of Caribbean coral reef fishes before and during settlement revealed the existence of a distinct post-settlement life phase called the transition juvenile, associated with the act of recruitment. Transition juveniles were found as solitary individuals, in conspecific groups, or in heterospecific groups. The groups were either uniform or heterogenous in appearance. The complexity of the transition phase and its apparently widespread occurrence in coral reef fishes suggests that important aspects of population structure may be determined between settlement and first appearance as a full-fledged juvenile.     

Resource limitation and recruitment patterns in a coral reef fish assemblage

The potential effects of food and shelter availability on the recruitment and early survivorship of coral reef fishes were studied on St. Croix, U.S. Virgin Islands. The faunal assemblage studied included diurnally active fishes found in the “rubble/sand” habitat. The most abundant members were: beaugregory, Stegastes leucostictus (Muller & Troschel), goldspotted goby, Gnatholepis thompsoni Jordan, bridled goby, Coryphopterus glaucofraenum Gill, surgeonfishes, Acanthurus bahianus Castelnau and A. chirurgus (Bloch), and French grunt, Haemulon flavolineatum (Desmarest). Comparisons of recruitment to reefs constructed from substrata that varied in morphological characteristics showed that there were differences in the relative abundances of recruits attracted to and/or surviving on the different reef types. Juveniles of most species appeared to prefer the branching coral Porites porites (Pallas), which provided a large number of small crevices between the branches.Manipulations of the availability of shelter sites for fishes demonstrated that recruitment and/or early survivorship were strongly limited by the number of refuges. This result was found in six separate carried out during different years and in different seasons. Shelter site availability presumably limits fish populations through its effects on prédation rates.Experimental manipulations of food availability indicated that food does not directly influence settlement or early survivorship of coral reef fishes. However, it is probable that correlations between habitat characteristics and food availability have influenced the evolution of settling preferences.     

Patterns of recruitment of coral reef fishes in a monsoonal environment

The abundance of newly settled recruits of coral reef fishes was monitored at a total of 11 sites at two islands and two coastal locations in the central Philippines for a 20-month period (February 2008 to September 2009) that included two monsoon cycles. Recruitment occurred throughout the year. Most of the abundant species exhibited protracted recruitment seasons. This confirms the expectation of extended breeding of reef fishes at lower latitudes. The annual pattern of recruitment of reef fishes as a group was predictable. Annual fluctuations of sea surface temperature and wind strength largely explained the pattern. Rainfall, however, did not significantly influence the pattern of recruitment. Peaks in density and species richness of recruits occurred during the southwest monsoon and the second inter-monsoonal period of the year (July to October) when temperatures were highest and when most of the sites were sheltered from winds or when winds were weak. Conversely, lowest density and species richness were observed during the northeast monsoon (November to March) when temperatures were lowest and most sites were exposed to winds. The same pattern could also be seen in the recruitment of both damselfishes (Pomacentridae) and wrasses (Labridae), notwithstanding a tenfold difference in abundance of recruits between the two families. The pattern was fairly consistent across most sites, among most of the species that were examined, and between the 2 years that were sampled. This study is one of the few to provide insights into the influence of environmental factors on the recruitment patterns of fishes on Indo-Pacific coral reefs situated at lower latitudes.     

Extended breeding and recruitment periods of fishes on a low latitude coral reef

The temporal dynamics of fish recruitment to equatorial Indo-Pacific coral reefs are not well known. This paper documents fish recruitment over a 2.5-year period in Kimbe Bay (PNG) and shows that it is much less seasonal than is typically described for higher latitude coral reefs. Two families, wrasses (Labridae) and damselfishes (Pomacentridae), which accounted for 90% of all non-cryptic reef fish settlers, exhibited contrasting patterns. Most wrasse species had year-round recruitment with irregular peaks in abundance between November and May. Damselfish species showed a wider range of recruitment patterns, but most had negligible recruitment during the wet season (December–February), followed by one or two recruitment peaks between May and November. Species with longer seasonal recruitment periods exhibited higher cumulative levels of recruitment. For three focal damselfish species, reproductive output was reduced during the wet season, but this alone did not account for the low recruitment at this time. The lack of damselfish recruitment during the wet season is hypothesised to be due to a combination of reduced reproductive output and increased larval mortality associated with monsoonal conditions. The results indicate that there are consistent family-wide recruitment strategies that may play a significant role in the dynamics of populations in equatorial waters.     

Localised high-density population of a sea cucumber on a Malaysian coral reef

Coral Reefs - While tropical sea cucumbers are among the most conspicuous mobile invertebrates on coral reefs, information on their population biology and ecology is limited, particularly...     

Demographic theory of coral reef fish populations with stochastic recruitment: comparing sources of population regulation

The effects of three forms of density-dependent regulation were explored in model coral reef fish populations: top-down (predation), bottom-up (competition for food), and pelagic (non-reef-based mechanisms) control. We describe the demographic responses of both biomass and numbers of adult fish, predicting the mean and the variance of temporal fluctuations resulting from stochastic recruitment of juveniles. We find that top-down control acts by suppressing variability of numbers of fish, which in turn suppresses the variability of biomass. Bottom-up control has no effect on fluctuations of numbers of fish, though it strongly reduces fluctuations of biomass. Because fecundity of fish is directly linked to body mass, the regulation of biomass tightly regulates reproductive output independently of the number of individuals in the population. Finally, populations under pelagic control experience bounded fluctuations of biomass and numbers directly proportional to the bounded fluctuations of recruitment. The demographic signatures predicted from both bottom-up and pelagic control are consistent with current evidence supporting the recruitment limitation hypothesis in reef fish ecology. We propose tests to discriminate the dominant mode of density-dependent regulation using qualitative trends in time series demographic data across environmental clines.     

Habitat choice,recruitment and the response of coral reef fishes to coral degradation

The global degradation of coral reefs is having profound effects on the structure and species richness of associated reef fish assemblages. Historically, variation in the composition of fish communities has largely been attributed to factors affecting settlement of reef fish larvae. However, the mechanisms that determine how fish settlers respond to different stages of coral stress and the extent of coral loss on fish settlement are poorly understood. Here, we examined the effects of habitat degradation on fish settlement using a two-stage experimental approach. First, we employed laboratory choice experiments to test how settlers responded to early and terminal stages of coral degradation. We then quantified the settlement response of the whole reef fish assemblage in a field perturbation experiment. The laboratory choice experiments tested how juveniles from nine common Indo-Pacific fishes chose among live colonies, partially degraded colonies, and dead colonies with recent algal growth. Many species did not distinguish between live and partially degraded colonies, suggesting settlement patterns are resilient to the early stages of declining coral health. Several species preferred live or degraded corals, and none preferred to associate with dead, algal-covered colonies. In the field experiment, fish recruitment to coral colonies was monitored before and after the introduction of a coral predator (the crown-of-thorns starfish) and compared with undisturbed control colonies. Starfish reduced live coral cover by 95–100%, causing persistent negative effects on the recruitment of coral-associated fishes. Rapid reductions in new recruit abundance, greater numbers of unoccupied colonies and a shift in the recruit community structure from one dominated by coral-associated fishes before degradation to one predominantly composed of algal-associated fish species were observed. Our results suggest that while resistant to coral stress, coral death alters the process of replenishment of coral reef fish communities.     

Nitrification on a coral reef.

We report that the algal pavement just behind the reef crest at Enewetak Atoll produces nitrate at measurable rates. In situ and in vitro incubations with N-Serve indicate that the autotrophic pathway involving two separate organisms is effective in this oxidation of ammonia to nitrate. Significant nitrification is indicated throughout the reef environment; Nitrobacter agilis has specifically been identified as at least one of the organisms responsible for the terminal oxidation of nitrite to nitrate.     

Strong density-dependent survival and recruitment regulate the abundance of a coral reef fish

Debate on the control of population dynamics in reef fishes has centred on whether patterns in abundance are determined by the supply of planktonic recruits, or by post-recruitment processes. Recruitment limitation implies little or no regulation of the reef-associated population, and is supported by several experimental studies that failed to detect density dependence. Previous manipulations of population density have, however, focused on juveniles, and there have been no tests for density-dependent interactions among adult reef fishes. I tested for population regulation in Coryphopterus glaucofraenum, a small, short-lived goby that is common in the Caribbean. Adult density was manipulated on artificial reefs and adults were also monitored on reefs where they varied in density naturally. Survival of adult gobies showed a strong inverse relationship with their initial density across a realistic range of densities. Individually marked gobies, however, grew at similar rates across all densities, suggesting that density-dependent survival was not associated with depressed growth, and so may result from predation or parasitism rather than from food shortage. Like adult survival, the accumulation of new recruits on reefs was also much lower at high adult densities than at low densities. Suppression of recruitment by adults may occur because adults cause either reduced larval settlement or reduced early post-settlement survival. In summary, this study has documented a previously unrecorded regulatory mechanism for reef fish populations (density-dependent adult mortality) and provided a particularly strong example of a well-established mechanism (density-dependent recruitment). In combination, these two compensatory mechanisms have the potential to strongly regulate the abundance of this species, and rule out the control of abundance by the supply of recruits.     

Algae sediment dynamics are mediated by herbivorous fishes on a nearshore coral reef

Coral Reefs - Epilithic algae are a ubiquitous component of coral reefs. Components of the epilithic algal matrix (EAM) can have a significant influence on coral settlement and benthic feeding by...     

Habitat complexity modifies the impact of piscivores on a coral reef fish population

Patterns in juvenile mortality rates can have a profound affect on the distribution and abundance of adult individuals, and may be the result of a number of interacting factors. Field observations at Lizard Island (Great Barrier Reef, Australia) showed that for a coral reef damselfish, Pomacentrus moluccensis, juvenile mortality (over 1 year) varied between 20 and almost 100% among sites. Correlative data showed that juvenile mortality increased as a function of initial densities (recruitment), predator densities and the availability of preferred coral substrata. A multiple regression showed that these three variables together did not explain significantly more variation in mortality than the single factor showing the strongest relationship. This appeared to be because recruitment, predator densities and preferred coral substrata were all highly correlated, suggesting that one, two or all of these factors may be influencing juvenile mortality rates. One hypothesis was that density-dependent mortality in juveniles was the result of an interaction between predators (which appear to aggregate at high-recruitment sites) and the availability of preferred substrata (predator refuges). We tested this hypothesis by using both laboratory and field experiments to see whether fish predation could significantly alter survivorship of this damselfish, and whether this impact was dependent upon the coral substratum. The laboratory experiment was designed to test the effects of three common predators (Pseudochromis fuscus, Cephalopholis boenak and Thalassoma lunare) and three different coral substrata that varied in their complexity (Pocillopora damicornis, Acropora nasuta and A. nobilis) on the survival of juvenile Pomacentrus moluccensis. There was a significant interaction between predator species and microhabitat in determining survival. Pseudochromis fuscus and C. boenak were both significantly better at capturing juvenile damselfish than T. lunare. Juvenile survivorship was significantly better when they were given the more complex corals, Pocillopora damicornis and A. nasuta, compared with those given the open-structured species A. nobilis. This pattern reflects habitat selection in the field. Predators differed in their strike rates and the proportion of strikes that were successful, but all exhibited greater success at prey capture where A. nobilis was provided as shelter. The interaction between the effect of predator species and microhabitat structure on damselfish survival was tested in the field for a cohort of juvenile Pomacentrus moluccensis. We examined juvenile survival in the presence and absence of two predators that co-occur on natural patch reefs (C. boenak and Pseudochromis fuscus). The experimental patch reefs we used for this purpose were constructed from both high complexity (Pocillopora damicornis) and low complexity (A. nobilis) coral substrata. Both juveniles and predators were translocated to reefs at natural densities. The effects of predation were clearly dependent upon the microhabitat. Reefs of the high-complexity coral with predators supported the same high numbers of Pomacentrus moluccensis as the reefs with no resident predators. However, damselfish abundance was significantly lower on low-complexity reefs with resident predators, relative to the other treatments. Background rates of loss were high, even on preferred coral in the absence of the manipulated predator, suggesting that transient predators may be even more important than the residents. We suggest that adult abundances in this species were strongly influenced by the densities of different predators and the availability of preferred refuges. Received: 3 April 1997 / Accepted: 26 August 1997     

Photoinhibition of photosynthesis on a coral reef

Photoinhibition of macroalgae in the epilithic algal community (KAC) of coral reefs was studied using chlorophyll fluorescence techniques at One Tree Island, Great Barrier Reef, Australia. F_v/F_m (variable to maximum fluorescence, darkened samples) of shallow macroalgae declined by 50% on fine summer and winter days, recovering in late afternoon. Within a species, thalli from low-light habitats were more photoinhibited (2h at 1400μimol m^?2 s^?1) than those from high-light habitats. The sensitivity of Lobophora variegata (Phacophyta) and Chlorodesmis fastigiata (Chlorophyta) increased with depth (1 versus 20 m). However, shallow Halimeda tuna (Chlorophyta) plants growing between corals were more photoinhibited than those from deep, open areas. Photoinhibition and recovery were depth- and species-specific. Shallow Lobophora and Chlorodesmis maintained a greater degree of Q _A oxidation during photoinhibition. In deep thalli, reduced effective quantum yield of open photosystem II centres reflected lower proportions and excitation capture efficiencies of open centres. In Lobophora, zeaxanthin formation accompanied non-photochemical fluorescence quenching (NPQ), but in Chlorodesmis NPQ was limited and no zeaxanthin or antherxanthin formed. Higher photosynthetic efficiency in the lower storey of the EAC may compensate for photoinhibition in the upper storey, thereby reconciling photoinhibition of individual thalli with previous observations of no net inhibition of community productivity.     

Individual movements and population density estimates for moray eels on a Caribbean coral reef

Observations of moray eel (Muraenidae) distribution made on a Caribbean coral reef are discussed in the context of long term population trends. Observations of eel distribution made using SCUBA during 1978, 1979–1980, and 1984 are compared and related to the occurrence of a hurricane in 1979. An estimate of the mean standing stock of moray eels is presented. The degree of site attachment is discussed for spotted morays (Gymnothorax moringa) and goldentail morays (Muraena miliaris). The repeated non-aggressive association of moray eels with large aggregations of potential prey fishes is detailed.     

Validation of a technique for reconstructing daily patterns in the recruitment of coral reef damselfish

Counting growth increments in otoliths recently has become an accepted method of ageing tropical fishes, however, verification is essential for each new species. In this study, growth increments in otoliths of the juveniles of several coral reef damselfishes (Pomacentridae) were deposited daily and a distinct transition from wide to narrow increments coincided with settlement from the pelagic larval phase into the demersal habitat. Thus, the data of settlement for each individual fish could be calculated with acceptable accuracy. The daily pattern of recruitment to a coral reef was successfully reconstructed using the otoliths from a large sample of juvenile fish collected at the end of the breeding season. This was because the original pattern of settlement was preserved in the age distribution for at least 4 to 5 months. This application of otolith ageing techniques may be extended to reveal the temporal patterns of recruitment to many localities encompassing spatial scales larger than would be logistically possible using visual censuses.     

A standard unit for monitoring recruitment of fishes to coral reef rubble

We developed a benthic standard monitoring unit for recruitment of fishes (SMURF) to sample fishes that settle in coral rubble and tested it on three fringing reefs on the west coast of Barbados, West Indies. These rubble SMURFs are inexpensive to construct and permit newly settled fishes, including cryptic, secretive and small species, to be quickly and fairly completely (> 83%) removed by divers without returning the unit to the surface. Over a 3-month period involving 9 collections, 32 units on 3 reefs yielded 948 newly settled fishes belonging to 28 taxa (3.3 ± 0.2 S.E. recruits per sample, n = 287) in addition to numerous crustaceans. Most specimens were Sparisoma spp. (Scaridae) (41.8%) and Stegastes partitus (Pomacentridae) (13.6%), with moderate numbers of Scarus spp. (Scaridae) (8.6%), Lythrypnus spp. (Gobiidae) (7.4%), and Pseudogramma gregoryi (Serranidae) (7.2%). Sampling SMURFs at 1-day rather than 11-day intervals yielded approximately twice as many fish, although some taxa were not affected by sampling frequency, indicating taxon-specific differences in post-settlement loss rates. Netting, intended to reduce predation on settlers, did not affect settlement estimates unless algae grew on it, suggesting that the SMURF design minimizes fish predation even in the absence of the netting. Over time, however, the netting resulted in substantial algal growth that was associated with an increase in abundance of Sparisoma spp. and a decrease in the abundance of S. partitus. This suggests that settler estimates are more affected by microhabitat changes from algal growth than by predation. During low settlement periods, SMURFs performed better than light-traps in assessing the daily input of new settlers of two abundant taxa. Eight SMURFs per reef were sufficient to demonstrate differences in settlement rates and temporal correlations in settlement within and among reefs. This study underscores the potential of benthic SMURFs to measure settlement of coral reef fishes at a range of spatio-temporal scales with moderate research cost and effort, and to facilitate the study of the settlement stage of several taxa.     

Spatio-temporal variability in fish recruitment to a coral reef (Moorea,French Polynesia)

Spatial and temporal patterns of recruitment of juvenile coral reef fishes were studied on the reefs of the high island of Moorea (Society Archipelago, French Polynesia) during the wet season (October 1988 to April 1989). Two size-classes of fishes (new-recruits and juveniles) were censused by visual counts within 24 quadrats along a transect across the lagoon. Correspondence analysis was used to calculate the hypothetical movements of the two size classes. Spatial variability was far more important than temporal variability; six main spatial communities were revealed, which could result from differences among habitats. Temporal variability in recuitment occurred only at nearshore stations; stations on the outer fringing reef and inner barrier reef displayed stable recruitment patterns.     

Configuration of small patch reefs and population abundance of a resident reef fish in a complex coral reef landscape

Habitat use by the resident coral reef anemonefish, Amphiprion frenatus, was examined in the complex coral reef landscape of Shiraho Reef, Ishigaki Island, Okinawa, Japan, using an enlarged color aerial photograph processed using image analysis software as an accurate field map. The anemonefish inhabit assemblages of the host sea anemone, Entacmaea quadricolor (clonal type), which inhabit various patch reefs in the back reef moat. We located all patch reefs inhabited by the host in the map based on snorkel observations: 297 anemonefish were found in 93 host assemblages in the study site of 2.9 ha. These patch reefs could be recognized by the reef colors, including the shadows (blackish color) in the photograph. Using image analysis software, the colors of the patch reefs were chosen and pixels with the same color values were regarded as potential habitat patches for the fish (PHPs). PHPs were 3D patch reefs (>0.5 m in height). Total areas (TA) and total perimeters (TP) of PHPs were measured in nine quadrats in the digitized aerial photograph. Host abundance and anemonefish abundance in a quadrat showed stronger correlations with the product of TA and TP of PHPs than TA alone. A site with numerous large 3D patch reefs (≥0.75 m² in situ) can be a better habitat for the fish than other sites consisting of several huge 3D patch reefs of the same total area. The methodology applied here may be useful for assessing the quality of habitats for small resident animals in shallow subtidal reefs.