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1.
【背景】猪瘟(Classical Swine Fever)是由猪瘟病毒(Classical Swine Fever Virus,CSFV)引起的猪高度接触性传染病,致死率极高。在临床中存在着CSFV与猪其他病原菌共感染的情况,例如CSFV与口蹄疫病毒(Foot-and-Mouth Disease Virus,FMDV)的共感染。【目的】利用CSFV与FMDV共感染猪源宿主细胞,研究CSFV与FMDV共感染对FMDV病毒复制的影响。【方法】构建体外共感染细胞模型,在正常PK-15细胞上进行CSFV共感染FMDV实验,通过观察细胞病变效应(Cytopathic Effect,CPE)、实时荧光定量PCR(RT-qPCR)、Western Blot、间接免疫荧光检测CSFV和FMDV共感染及FMDV单独感染情况下FMDV复制水平的差异。利用RT-qPCR筛选鉴定能够影响FMDV复制的CSFV蛋白。【结果】CSFVC株共感染FMDV能够抑制FMDV的复制,而且灭活的CSFV同样抑制FMDV的复制。通过筛选鉴定出CSFV的C蛋白能够抑制FMDV复制。【结论】研究发现CSFV C株共感染FMDV能够抑制FMDV复制,而其C蛋白具有抑制FMDV复制的能力。  相似文献   

2.
This report describes the use of Bayesian methods to analyze polyprotein coding region sequences (n = 217) obtained from GenBank to define the genome-wide phylogeny of foot and mouth disease virus (FMDV). The results strongly supported the monophyly of five FMDV serotypes, O, A, Asia 1, C, and SAT 3, while sequences for the two remaining FMDV serotypes, SAT 1 and SAT 2 did not separate into entirely distinct clades. The phylogenomic tree revealed three sister-group relationships, serotype O + Asia 1, A + C, and SAT 1 + 3 + 2, with a new branching pattern: {[(O, Asia 1), (A, C)], (SAT 1, 2, 3)}. Within each serotype, there was no apparent periodic, geographic, or host species influence on the evolution of global FMDVs. Analysis of the polyprotein coding region of these sequences provided evidence for the influence of purifying selection on the evolution of FMDV. Using a Bayesian coalescent approach, the evolutionary rate of FMDV isolates that circulated during the years 1932-2007 was estimated to be 1.46 × 10(-3) substitutions/site/year, and the most recent common ancestor of the virus existed approximately 481 years ago. Bayesian skyline plot revealed a population expansion in the early 20(th) century that was followed by a rapid decline in population size from the late 20(th) century to the present day. These findings provide new insights into the mechanisms that impact on the evolution of this important livestock pathogen.  相似文献   

3.
【目的】研究口蹄疫病毒(foot-and-mouth disease virus,FMDV) poly(C)区段的序列长度与FMDV毒力之间的关系。【方法】首先利用NheⅠ/NotⅠ线化FMDV pGEM-XJ/AKT/69全长重组质粒,制备体外转录本,借助Lipofectamine 2000转染BHK-21细胞,获得基因工程毒。随后,在细胞传代过程中,收取不同代数病毒培养液,提取总RNA进行poly(C)的长度测定,并进行乳鼠致病性试验和BHK-21细胞TCID50的测定。【结果】我们发现,基因工程毒在BHK-21上连续传代至第6代时,可见明显的致细胞病变效应(cytopathic effect,CPE);在经过一代乳鼠接种之后再重新适应到BHK-21细胞的过程中,poly(C)区段出现了缩短现象;乳鼠致病性试验和BHK-21细胞TCID50测定结果表明,尽管基因工程毒与母本毒相比毒力偏低,但含有不同长度poly(C)的基因工程毒之间并无显著差异。【结论】poly(C)区段的序列长度在12~17个C之间改变对FMDV基因工程毒的毒力无明显的影响。  相似文献   

4.
从GenBank数据库中获得在我国分离的16株口蹄疫病毒全基因组序列,进而运用常规的系统发生方法分析了这16株病毒的同源重组情况,发现5株重组毒株.这些重组病毒主要来源于亚洲Ⅰ型(Asia1)和O型病毒间的重组.这些重组事件的鉴定也表明口蹄疫病毒间的交叉感染在我国比较常见.另外,在我国还出现了由于Asia1型和O型病毒重组后导致病毒血清型发生转化的现象.这些结果解释了我国口蹄疫病毒(FMDV)遗传多样性和抗原多变性的成因,提示了我国在口蹄疫预防、治疗方面所面临的复杂局面.  相似文献   

5.
【目的】利用反向遗传操作技术,构建含O型口蹄疫病毒(food-and-mouth disease virus, FMDV) 3个拓扑型免疫优势结构蛋白基因的重组FMDV,评估其作为猪O型口蹄疫(food-and-mouth disease, FMD)疫苗候选株的潜力。【方法】通过基因合成,在FMD疫苗株O/HN/CHA/93 (古典中国拓扑型)的基因中嵌合流行株O/NXYCh/CHA/2018 (东南亚拓扑型) VP1结构蛋白的重组病毒骨架上,用O/TUR/5/2009疫苗株(中东-南亚拓扑型) VP1蛋白的G-H环基因替换其对等基因,构建含O型3个拓扑型FMDV结构蛋白基因的重组全长质粒,Not I线性化后转染表达T7 RNA聚合酶的BSR/T7细胞,拯救重组病毒。通过RT-PCR、序列测定、间接免疫荧光鉴定重组病毒;噬斑试验和一步生长曲线分析重组病毒的生物学特性。重组病毒制备疫苗免疫猪,用病毒中和试验分析其对当前流行的O型3个拓扑型FMDV的交叉反应性。【结果】成功拯救到含O型3个拓扑型FMDV结构蛋白基因的重组病毒,重组病毒与亲本病毒具有相似的生物学特性。亲本病毒和重组病毒制备的疫苗免疫猪,均能够对中东-南亚型(Middle East-South Asia, ME-SA)拓扑型和东南亚型(South-East Asia, SEA)拓扑型病毒株产生保护性平均中和抗体(>1.65log10);均不能对古典中国型(Cathay)拓扑型流行株产生保护性平均中和抗体(<1.65log10),但与亲本病毒相比,O/TUR/5/2009疫苗株G-H环基因的替换显著提高了对ME-SA和SEA拓扑型病毒株的交叉反应性(p<0.05)。【结论】本研究对未来FMD疫苗的设计具有重要的指导意义。  相似文献   

6.
口蹄疫病毒(FMDV)感染过程中的特异性受体是FMDV识别,结合宿主细胞的分子基础,研究FMDV受体的结构与功能对防治口蹄疫具有重要的理论意义和应用价值。本论述了近年来关于整联蛋白αvβ3,αvβ6和硫酸乙酰肝素(HS)三种FMDV受体的结构与功能的研究进展。  相似文献   

7.
【目的】测定一株A型口蹄疫流行毒株的全基因组序列,并构建其全长感染性克隆。【方法】参照已公布的A型口蹄疫病毒序列设计引物,将分离的口蹄疫病毒株A/Sea-97/CHA/2014全基因组分为4个重叠的片段进行RT-PCR扩增,并对其进行序列测定与分析。利用酶切连接法将4个基因片段依次克隆至p Blue Script SKhdv载体中,构建该流行毒株的全长c DNA克隆p QAHN。pQAHN经NotⅠ线性化后转染表达T7 RNA聚合酶的BSR/T7细胞,拯救病毒。【结果】口蹄疫病毒全基因组序列测定结果表明该毒株基因组全长8 171 bp[不包括poly(C)区段和poly(A)尾巴],开放阅读框为6 996 bp,编码2 332个氨基酸,5′和3′非编码区分别为1 091 bp和95 bp。VP1系统发生树分析表明该毒株与A/GDMM/CHA/2013毒株亲缘关系最近,相似性为99.1%。线化全长质粒转染BSR/T7细胞68 h后可观察到典型的细胞病变。拯救病毒的间接免疫荧光、RT-PCR和序列测定结果表明成功拯救出了具有感染性的FMDV。拯救病毒与亲本病毒的噬斑表型及生长曲线试验表明二者具有相似的生长表型和增殖能力。【结论】该研究为我国口蹄疫病原生态分布、分子流行病学调查以及A型FMD新型疫苗的研究提供了有益的材料。  相似文献   

8.

Background

Next-Generation Sequencing (NGS) is revolutionizing molecular epidemiology by providing new approaches to undertake whole genome sequencing (WGS) in diagnostic settings for a variety of human and veterinary pathogens. Previous sequencing protocols have been subject to biases such as those encountered during PCR amplification and cell culture, or are restricted by the need for large quantities of starting material. We describe here a simple and robust methodology for the generation of whole genome sequences on the Illumina MiSeq. This protocol is specific for foot-and-mouth disease virus (FMDV) or other polyadenylated RNA viruses and circumvents both the use of PCR and the requirement for large amounts of initial template.

Results

The protocol was successfully validated using five FMDV positive clinical samples from the 2001 epidemic in the United Kingdom, as well as a panel of representative viruses from all seven serotypes. In addition, this protocol was successfully used to recover 94% of an FMDV genome that had previously been identified as cell culture negative. Genome sequences from three other non-FMDV polyadenylated RNA viruses (EMCV, ERAV, VESV) were also obtained with minor protocol amendments. We calculated that a minimum coverage depth of 22 reads was required to produce an accurate consensus sequence for FMDV O. This was achieved in 5 FMDV/O/UKG isolates and the type O FMDV from the serotype panel with the exception of the 5′ genomic termini and area immediately flanking the poly(C) region.

Conclusions

We have developed a universal WGS method for FMDV and other polyadenylated RNA viruses. This method works successfully from a limited quantity of starting material and eliminates the requirement for genome-specific PCR amplification. This protocol has the potential to generate consensus-level sequences within a routine high-throughput diagnostic environment.

Electronic supplementary material

The online version of this article (doi:10.1186/1471-2164-15-828) contains supplementary material, which is available to authorized users.  相似文献   

9.
Song H  Fang W  Wang Z  Zheng D  Du J  Li H  Li Y  Qiu B 《Biotechnology letters》2004,26(16):1277-1281
A codon optimized DNA sequence coding for foot-and-mouth disease virus (FMDV) capsid protein complex epitopes of VP1 amino acid residues 21-40, 135-160, and 200-213 was genetically fused to the C-terminal end of a glutathione-S-transferase (GST) gene in pGEX-6P-1 vector with the synonymous codons preferred by Escherichia coli . The gene was synthesized using PCR and subsequently expressed in E. coli producing an intracellular, soluble fusion protein that retained antigenicity associated with FMDV antibodies by western blot analysis. The chimera was purified from bacterial lysates by affinity chromatography and could be used in ELISA tests for antibodies against FMDV.  相似文献   

10.
旨在建立一种检测口蹄疫病毒非结构蛋白抗体的敏感、特异的ELISA方法。克隆、表达了口蹄疫病毒非结构蛋白3AB基因,原核表达的重组蛋白经亲和层析法纯化及Western blotting鉴定后作为包被抗原,建立检测口蹄疫病毒非结构蛋白抗体的3AB间接ELISA方法,通过与商品化试剂盒3ABC-ELISA的比对试验对其进行评价。结果显示,重组蛋白3AB以包涵体形式表达;能与口蹄疫病毒感染血清发生特异性反应,而不能与疫苗免疫动物血清发生反应;在检测田间样品时,与3ABC-ELISA具有同样的特异性和敏感性 (P>  相似文献   

11.
为了研制口蹄疫抗原表位突变标记疫苗,本研究以含有Asia 1型口蹄疫病毒(FMDV)c DNA全长的感染性克隆p Asia 1-FMDV作为骨架,将3D蛋白中第27位氨基酸的H和31位的氨基酸N分别突变成Y和R,从而突变3D蛋白的一个抗原表位,将构建的带有突变表位的重组质粒转染BHK-21细胞,成功拯救出一株突变FMDV。经比较后发现,重组病毒的生物学特性与亲本毒株相似。病毒中和试验结果显示,抗重组病毒的血清与亲本病毒有良好的反应性。Western blotting结果表明重组病毒诱导的抗体能与突变的表位合成肽反应而不与野生型病毒的表位合成肽发生反应,从而区分重组病毒与亲本病毒。综上所述,这株抗原表位突变FMDV有望作为口蹄疫标记疫苗候株进一步评估。  相似文献   

12.
【目的】利用口蹄疫病毒的反向遗传操作技术,构建含不同外源标签口蹄疫病毒的全长克隆,鉴定口蹄疫病毒结构蛋白VP1容忍不同外源标签的能力。【方法】通过融合PCR技术,在FMDV O/HN/93全长感染性克隆的VP1 G-H环分别引入V5、TC12、KT3、3FLAG外源标签,构建全长质粒。全长质粒经Not I线化后转染表达T7 RNA聚合酶的稳定细胞,拯救重组病毒。RT-PCR、序列测定、间接免疫荧光鉴定病毒,噬斑和一步生长曲线分析重组病毒的生物学特性。【结果】成功拯救到表达V5或KT3表位标签的重组病毒,未能拯救到表达TC12或3×FLAG的重组病毒。V5和KT3表位标签的插入均影响了口蹄疫病毒的复制能力。【结论】重组口蹄疫病毒的成功拯救为未来标记疫苗以及口蹄疫病毒作为表达载体等的研究奠定了基础。  相似文献   

13.
14.
ANXA1促进Ⅰ型干扰素表达抑制口蹄疫病毒的复制   总被引:1,自引:0,他引:1  
【目的】研究膜联蛋白A1(Annexin A1,ANXA1)对Ⅰ型干扰素(I-IFN)表达及口蹄疫病毒(FMDV)复制的影响。【方法】开展过表达及Knockdown实验,检测ANXA1对FMDV复制的影响。利用双荧光素酶报告系统检测ANXA1对ISRE和IFN-β启动子元件活化的影响。双荧光素酶报告系统鉴定ANXA1调控Ⅰ-IFN通路活化靶分子。Western blotting检测ANXA1对干扰素调解因子3(IRF3)磷酸化的影响。Real-time PCR检测ANXA1对干扰素刺激基因(ISGs)的影响。【结果】过表达ANXA1显著抑制FMDV的复制;下调ANXA1表达促进FMDV复制(P0.01或P0.05);ANXA1促Ⅰ型干扰素通路活化,呈现剂量依赖性(P0.01)。ANXA1显著增强IRF3的磷酸化,促进ISGs的表达(P0.01或P0.05)。【结论】ANXA1促进Ⅰ-IFN表达,抑制FMDV的复制。  相似文献   

15.
16.
Infection by foot-and-mouth disease virus (FMDV) is triggered by the acidic pH in endosomes after virus uptake by receptor-mediated endocytosis. However, dissociation of the FMDV 146S particle in mildly acidic conditions renders inactivated foot-and-mouth disease (FMD) vaccines much less effective. Type Asia1 FMDV mutants with increased resistance to acid inactivation were selected to study the molecular basis of viral resistance to acid-induced disassembly and improve the acid stability of FMDV. Sequencing of capsid-coding regions revealed four amino acid replacements (VP1 N17D, VP2 H145Y, VP2 G192D, and VP3 K153E) in the viral population of the acid-selected 10th passage. We performed single or combined mutagenesis using a reverse genetic system, and our results provide direct experimental evidence that VP2 H145Y or VP1 N17D substitution confers an acid-resistant phenotype to type Asia1 FMDV.  相似文献   

17.
为揭示肥大细胞抗口蹄疫病毒VP1-VP4蛋白的天然免疫作用,以重组口蹄疫病毒VP1-VP4蛋白刺激小鼠腹腔肥大细胞(Peritoneal mast cells,PMCs),用高通量ELISA芯片检测PMCs的蛋白质表达谱。结果显示,VP1-VP4蛋白刺激的PMCs(VP1-VP4组)表达CCL19、L-selectin、CCL17和TNF-α的水平极显著低于对照组(PMCs)(P0.001),而VP1-VP4蛋白刺激经甘露糖受体(Mannose receptor,MR)抑制剂预处理的PMCs(MR组)表达CCL19、IL-15、IL-9、G-CSF和Galectin-1的水平则极显著高于对照组(P0.01),IL-10表达水平也有显著升高(P0.05)。MR组与VP1-VP4组相比,PMCs表达IL-10、IL-17、CCL20、IL-15、IL-9、L-selectin、CCL17、TNF-α和CCL19的水平极显著升高(P0.01),CCL21和G-CSF的表达也显著高于VP1-VP4组(P0.05)。生物信息学差异表达分析结果显示,与对照组相比,VP1-VP4组PMCs表达的L-selectin和CCL17为下调性差异表达蛋白(Log2(ratio)≤–1)。MR组与VP1-VP4相比,PMCs表达的CCL20、CCL19、L-selectin和IL-15为上调性差异表达蛋白(Log_2(ratio)≥1)。这表明,PMCs可自发分泌CCL19、L-selectin、CCL17和TNF-α,而VP1-VP4则对PMCs的天然免疫功能具有抑制作用。由于阻断MR后PMCs的蛋白质表达水平显著升高,所以VP1-VP4对小鼠PMCs的免疫抑制作用可能是由MR介导的。  相似文献   

18.
2009~2011年从北方发病鸡群和鸭群中分离出3株新城疫病毒(Newcastle disease virus,NDV)。通过致病性指数测定及交叉血凝抑制试验初步分析了3个毒株的毒力和相互之间的同源性。选取鸡源分离株SDLY01与新城疫疫苗株(LaSota)进行了交叉保护试验,选取鸭源毒株SD03对樱桃谷鸭进行攻毒实验,同时设计引物对3个毒株进行了全基因组测序,并与36株NDV参考株进行了分子进化分析。结果表明3个分离株F蛋白裂解位点的氨基酸序列均为112R-R-Q-K-R-F117符合强毒株的序列特征,并与致病性指数测定结果相符。交叉血凝抑制试验发现3个分离株与疫苗株LaSota 的抗原同源性较低为82.5%~89.4%,两个鸡源分离株间的抗原同源性为90%,而鸭源毒株SD03与鸡源毒株SDSG01同源性为100%。交叉保护试验和攻毒实验结果显示传统的LaSota疫苗能对SDLY01流行株提供100%免疫保护,但第5天仍检测到排毒;鸭源毒株SD03对樱桃谷鸭不致病,但能检出排毒,排毒期最长为5d。全基因组测序与分析表明3个毒株基因组长度均为15192bp,属于基因Ⅶd型毒株,与同期流行的鹅源及鸭源NDV毒株之间全基因组核苷酸序列具有高度的同源性,揭示鸭源、鹅源NDV与鸡源NDV在遗传学和流行病学上密切相关。  相似文献   

19.
表达并纯化猪O型口蹄疫病毒(FMDV)VP1重组蛋白作为检测抗原,建立了一种快速检测猪O型口蹄疫病毒抗体的化学发光酶联免疫(CLEIA)检测方法。建立的VP1-CLEIA方法特异性为100%,板内变异系数在1.10%–6.70%之间,板间变异系数在0.66%–4.80%之间,具有较好的特异性和重复性,且灵敏度高于ELISA方法。通过对山东、辽宁、河北地区采集的250份临床血清的检测表明,该方法与间接ELISA试剂盒的符合率为93.50%,与液相阻断ELISA试剂盒的符合率为94.00%,表明本次建立的VP1-CLEIA检测方法可以用于猪O型FMDV感染或疫苗免疫后抗体水平检测。  相似文献   

20.
The Fab fragment of the neutralizing monoclonal antibody SD6 elicited against foot-and-mouth disease virus (FMDV) C-SBcl and its complex with a peptide, corresponding to the major antigenic site of FMDV (VPl residues 136–150, YTASARGDLAHLTTT), have been crystallized using the hanging drop vapor diffusion techniques. For the isolated Fab, crystals diffracting to 2.5 Å resolution were obtained at room temperature using ammonium sulfate as precipitant. These crystals are monoclinic, space group C2, and unit cell parameters a = 109.53 Å, b = 89.12 Å, c = 64.04 Å, and β = 112.9° and contain one Fab molecule per asymmetric unit. Crystals from the complex diffract, at least, to 2.8 Å resolution and were obtained, at room temperature, using PEG as precipitant. These crystals are monoclinic, space group P2, and unit cell parameters a = 56.11 Å, b = 60.67 Å, c = 143.45 Å, and β = 95.4°, Density packing considerations indicate that there are two Fab molecules in the asymmetric unit. © 1994 John Wiley & Sons, Inc.  相似文献   

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