Plasmid participation in the degradation of alpha-methylstyrene

Pseudomonas acidovorans 9 transforming alpha-methylstyrene into acetophenone contains four types of plasmid DNA with molecular masses of 130, 110, 36 and 54 MD. The loss of the "growth on alpha-methylstyrene" property by this strain correlates with the absence of plasmids with the molecular masses of 130 and 110 MD from the cells. All the types of plasmid DNA are found in transconjugants growing on alpha-methylstyrene and produced by crossing the parent P. acidovorans strain with the plasmidless variant of this strain incapable of alpha-methylstyrene transformation. Apparently, plasmids with the molecular masses of 130 and 110 MD participate in the genetic control of alpha-methylstyrene transformation into acetophenone by P. acidovorans 9.     

TRANSFORMATION OF ROD-SHAPED ALGAL CELLS INTO SPHERICAL CELLS

Transformation of the rod-shaped algal cells, which before the conversion could be considered as belonging to the genus Stichococcus, into spherical cells was achieved by the action of the tryptic soy broth and some other organic media. Transformation did not involve degradation of the cell wall, and the resulting spheres were not sensitive to osmotic shock. The transformed cells could be propagated as spheres for several months but eventually reverted to the original rod shape. The reversion could be hastened by transferring spherical cells back into inorganic medium and growing the cells autotrophically. For a long time after reversion, the cells maintained characteristics different from those of the original rod-shaped cells which did not go through the conversion and reversion processes. The reverted cells had a higher rate of heterotrophic growth, a lower rate of autotrophic growth, and a lower capacity for being again transformed into spheres under the influence of tryptic soy broth.     

Using citizen science to obtain data on large,floating gelatinous spheres from NE Atlantic,attributed to egg mass of ommastrephid squid (Oegopsida,Cephalopoda, Mollusca)

A total of 27 large, gelatinous spherical masses observed in coastal Norwegian waters from Nordland to Aust-Agder Counties in Norway, and off Lysekil in Sweden, Muljica Island in Croatia, Gulf of Naples in Italy, Reqqa Point in Malta, and Saint Mandrier in France, during the months of April to September 2001 to 2017, are reported. Individual spheres measured 0.3–2 m in diameter, averaging one metre (n?=?24, ±0.53 m), with all but four sighted in suspension in the water column between 0.5 and 52 m depth, in water temperatures ranging between 10–21°C. About half of all spheres contained a yellow-red streak through their gelatinous core. Tissue samples were not obtained. We attribute these gelatinous spheres to the egg masses of squid (Cephalopoda, Oegopsida), and most likely to the ommastrephid Todarodes sagittatus, given similarities with egg masses of T. pacificus.     

Tunic phagocytes are involved in allorejection reaction in the colonial tunicate Aplidium yamazii (Polyclinidae, Ascidiacea)

The colonial ascidian Aplidium yamazii exhibited an allorejection reaction when two allogeneic colonies were brought into contact at their growing edges or at artificial cut surfaces. This species has no vascular network in the tunic, unlike the botryllid ascidians, which have a vascular network throughout the colony's common tunic. In the allorejection reaction induced by contact at the growing edges, some small, hard-packed tunic masses were formed at the contact points. Histological and electron microscopic investigation of these tunic masses revealed that they contained aggregates of tunic cells, with tunic phagocytes being the major cell type present. Some of the tunic phagocytes in these tunic masses appeared to be disintegrating. When allogeneic colonies were placed in contact at their artificial cut surfaces, the colonies partially fused, then separated. In this allorejection reaction, some loosely packed tunic masses remained in the gap between the two withdrawn colonies. These results strongly suggest that the tunic phagocytes are likely to be the major effector cells in the allorejection reaction. We also propose that the tunic phagocytes are not only the effector cells in the allorejection reaction but also bear the sites of allorecognition.     

Spherical and rod shaped protoplasts from β-lactam antibiotic treated cultures of Bacillus subtilis

Abstract Addition of β-lactams to exponentially growing cultures of an autolytically deficient Bacillus subtilis met c3 lyt -2 strain FJ6 caused increase in optical density to stop after 1 h when it had about doubled, and thereafter to remain constant for at least 6 h. The number of protoplasts to be derived per unit dry weight of bacteria started to fall when the antibiotic was added and after 1 h had reached 50% of the initial value. Also during the first hour but after a lag of 20–30 min an increasing number of membrane bound rod shaped protoplasts were seen among the normal spherical ones. These swelled to spheres and ultimately burst if the concentration of sucrose in the suspending fluid was gradually reduced. These results would be best explained by rapid inhibition of initiation of cell division followed by membrane damage to an increasing proportion of cells.     

Intracellular Substrates for Endogenous Metabolism During Long-Term Starvation of Rod and Spherical Cells of Arthrobacter crystallopoietes

Cells of Arthrobacter crystallopoietes, harvested during growth as spheres and as rods, were starved by shaking at 30 C in phosphate buffer for 30 days, during which time they maintained 100% viability. Changes in cellular components and the activity of specific enzyme pathways were monitored. A glycogen-like polysaccharide comprised 40% of the dry weight of growing spherical cells and 10% of the dry weight of rod cells. This material was utilized at approximately the same rate, on a percentage basis, during starvation of both cell forms. The rods degraded intracellular protein at approximately twice the rate of the spheres. At the end of 30 days, the rods had degraded 40% and the spheres 20% of their initial content of protein. Ribonucleic acid (RNA) was degraded significantly more rapidly in the rods. After 30 days starvation, 85 and 32% of the initial RNA of rods and spheres, respectively, had been depleted. Magnesium ion followed this same general pattern; the rods lost 65% and the spheres 45% of their initial content during 28 days of starvation. Deoxyribonucleic acid increased by 20% during the first few hours of starvation of both cell forms and then remained constant. The ability of glucose-, succinate-, and 2-hydroxypyridine (2-HP)-grown cells to oxidize glucose remained constant during 14 days of starvation. The ability of succinate-grown cells to oxidize succinate decreased rapidly during the first few hours of starvation to a rate which remained constant for 14 days. Cells adapted to growth on 2-HP completely lost their ability to oxidize this substrate after 3 days starvation.     

Cometabolism of polychlorinated biphenyls: enhanced transformation of Aroclor 1254 by growing bacterial cells.

Acinetobacter sp. strain P6 and a soil isolate, Arthrobacter sp. strain B1B, were tested for their ability to transform Aroclor 1254 as washed resting cells and as growing cells with biphenyl as the substrate. Growing cells were far superior to resting-cell suspensions in terms of total polychlorinated biphenyl (PCB) transformation, transformation of specific PCB congeners, and diversity of congeners that were attacked. Growing cells of Acinetobacter sp. strain P6 and Arthrobacter sp. strain B1B transformed 32 and 23% of the [14C]Aroclor 1254, respectively, whereas resting cells of the same respective cultures transformed only 17 and 8%. Transformation was significantly greater with resting cells in only 2 of 39 cases in which congeners were transformed by both growing and resting cells of both cultures. The components of 19 and 12 capillary gas-chromatographic peaks of Aroclor 1254 were transformed by biphenyl-grown resting cells of Acinetobacter sp. strain P6 and Arthrobacter sp. strain B1B, respectively, whereas the components of an additional 6 and 7 peaks were attacked by growing cells of the same respective cultures. Biphenyl oxidation by resting cells of both cultures decreased with time to less than 8% in 28 h. In addition to the normal 2,3-dioxygenase attack on PCBs, Acinetobacter sp. strain P6 also attacked congeners lacking an open 2,3-position. The ability of Acinetobacter sp. strain P6 to transform the components of 25 of the 40 largest peaks of Aroclor 1254 makes it one of the most versatile PCB-transforming organisms yet reported.     

Purification and characterization of cyanophycin and cyanophycin synthetase from the thermophilic Synechococcus sp. MA19

The biosynthesis and accumulation of cyanophycin in the thermophilic cyanobacterium Synechococcus sp. MA19 were studied. By growing the cells in a 80-l closed tubular photobioreactor under controlled conditions, the cells accumulated cyanophycin amounting up to 3.5% of the dry cell matter. The cyanophycin was purified and chemical analysis showed that it was composed of arginine and aspartic acid occurring at a molar ratio of 1:0.9. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis revealed a broad distribution of the apparent molecular masses ranging from 20 to 130 kDa with a maximum at 50 kDa. During a three-step purification procedure involving ion exchange chromatography and gel filtration, the cyanophycin synthetase from strain MA19 was purified 144-fold to electrophoretic homogeneity. It consisted of only one single type of subunit exhibiting an apparent molecular mass of 130 kDa. The enzyme catalyzed the polymerization of arginine and aspartate at elevated temperatures and was even active at 80 degrees C.     

Cometabolism of polychlorinated biphenyls: enhanced transformation of Aroclor 1254 by growing bacterial cells

Acinetobacter sp. strain P6 and a soil isolate, Arthrobacter sp. strain B1B, were tested for their ability to transform Aroclor 1254 as washed resting cells and as growing cells with biphenyl as the substrate. Growing cells were far superior to resting-cell suspensions in terms of total polychlorinated biphenyl (PCB) transformation, transformation of specific PCB congeners, and diversity of congeners that were attacked. Growing cells of Acinetobacter sp. strain P6 and Arthrobacter sp. strain B1B transformed 32 and 23% of the [14C]Aroclor 1254, respectively, whereas resting cells of the same respective cultures transformed only 17 and 8%. Transformation was significantly greater with resting cells in only 2 of 39 cases in which congeners were transformed by both growing and resting cells of both cultures. The components of 19 and 12 capillary gas-chromatographic peaks of Aroclor 1254 were transformed by biphenyl-grown resting cells of Acinetobacter sp. strain P6 and Arthrobacter sp. strain B1B, respectively, whereas the components of an additional 6 and 7 peaks were attacked by growing cells of the same respective cultures. Biphenyl oxidation by resting cells of both cultures decreased with time to less than 8% in 28 h. In addition to the normal 2,3-dioxygenase attack on PCBs, Acinetobacter sp. strain P6 also attacked congeners lacking an open 2,3-position. The ability of Acinetobacter sp. strain P6 to transform the components of 25 of the 40 largest peaks of Aroclor 1254 makes it one of the most versatile PCB-transforming organisms yet reported.     

Changes in polypeptide composition of Synechocystis sp. strain 6308 phycobilisomes induced by nitrogen starvation.

Phycobilisomes isolated from actively growing Synechocystis sp. strain 6308 (ATCC 27150) consist of 12 polypeptides ranging in molecular mass from 11.5 to 95 kilodaltons. The phycobilisome anchor and linker polypeptides are glycosylated. Nitrogen starvation causes the progressive loss of phycocyanin and allophycocyanin subunits with molecular masses between 16 and 20 kilodaltons and of two linker polypeptides with molecular masses of 27 and 33 kilodaltons. Nitrogen starvation also leads to enrichment of four additional polypeptides with molecular masses of 46, 53, 57, and 61 kilodaltons and a transient enrichment of 35- and 41-kilodalton polypeptides in isolated phycobilisomes. The 57-kilodalton additional polypeptide was identified by immunoblotting as the large subunit of ribulosebisphosphate carboxylase/oxygenase. Proteins with the same molecular weights as the additional polypeptides were also coisolated with the 12 phycobilisome polypeptides in the supernatant of nitrogen-replete Synechocystis thylakoid membranes extracted in high-ionic-strength buffer and washed with deionized water. These observations suggest that the additional polypeptides in phycobilisomes from nitrogen-starved cells may be soluble or loosely bound membrane proteins which associate with phycobilisomes. The composition and degree of association of phycobilisomes with soluble and adjacent membrane polypeptides appear to be highly dynamic and specifically regulated by nitrogen availability. Possible mechanisms for variation in the strength of association between phycobilisomes and other polypeptides are suggested.     

Microbial engineering for easy downstream processing

Downstream is a very expensive process for microbial fermentation. It usually involves complicated equipment and processes to obtain desired chemicals or materials from intra- or/and extracellular spaces of microorganisms. Recently, it becomes possible to simplify the microbial cell separation processes by morphologically engineering the shapes of small microorganisms. Cells can be induced aggregated, or enlarged into fibers or large spheres, so that gravity sedimentation or press filtration becomes a convenient operation. Various genes related to the microbial morphology have been manipulated to obtain large shapes and multiple fission to form long fibers or large spheres. At the same time, induced lysis of cells can be achieved by introducing lysis gene into the cells. To achieve better economy, it is desirable to receive products both in broths and in cell masses. Co-production of different chemicals produced intracellularly and extracellularly could be an effectively economical way. Based on these novel methods, easy cell separation in the downstream processing is expected to be achieved soon.     

Bacillus thuringiensis serovar shandongiensis strain 89-T-34-22 produces multiple cytotoxic proteins with similar molecular masses against human cancer cells

AIMS: To prove that Bacillus thuringiensis serovar shandongiensis strain 89-T-34-22 produces several novel cytotoxic proteins against human leukaemic T cells. METHODS AND RESULTS: Parasporal inclusion protein was solubilized and processed by proteinase K and was separated by anion-exchange chromatography. Cytopathic effects of each fraction against MOLT-4 and Jurkat cells were monitored. CONCLUSIONS: Existence of at least two novel cytotoxic proteins was suggested and N-terminal sequences of the newly identified proteins were determined to be QSTTDVIREY and X (Y or I) (P or I) NLANELA (X indicates uncertain amino acids). Molecular masses of the two proteins were approx. 27-28 kDa. SIGNIFICANCE AND IMPACT OF THE STUDY: In this study, we demonstrated that the strain 89-T-34-22 produces at least two novel cytotoxic proteins with similar molecular masses against human cancer cells. This is the first strain of B. thuringiensis which produces multiple cytotoxic proteins against human cancer cells.     

Gliding motility of Cytophaga sp. strain U67.

Video techniques were used to analyze the motion of the gliding bacterium Cytophaga sp. strain U67. Cells moved singly on glass along the long axis at a speed of about 2 micrometers/s, advancing, retreating, stopping, pivoting about a pole, or flipping over. They did not flex or roll. Cells of different lengths moved at about the same speed. Cells sometimes spun continuously about a pole at a frequency of about 2 HZ, the body moving in a plane parallel to that of the glass or on the surface of a cone having either a large or a small solid angle. Polystyrene latex spheres moved to and fro on the surfaces of cells, also at a speed of about 2 micrometers/s. They moved in the same fashion whether a cell was in suspension, gliding, or at rest on the glass. Two spheres on the same cell often moved in opposite directions, passing by one another in close proximity. Small and large spheres and aggregates of spheres all moved at about the same speed. An aggregate moved down the side of a cell with a fixed orientation, even when only one sphere was in contact with the cell. Spheres occasionally left one cell and were picked up by another. Cell pretreated with small spheres did not adhere to glass. When the cells were deprived of oxygen, they stopped gliding, and the spheres stopped moving on their surfaces. The spheres became completely immobilized; they no longer moved from cell to cell or exhibited Brownian movement. Cytophaga spp. are known to have a typical gram-negative cell envelope: an inner (cytoplasmic) membrane, a thin peptidoglycan layer, and an outer (lipopolysaccharide) membrane. Our data are consistent with a model for gliding in which sites to which glass and polystyrene strongly adsorb move within the fluid outer membrane along tracks fixed to the rigid peptidoglycan framework.     

Growth and differentiation of the cultured secretory cells of the cow oviduct on reconstituted basement membrane

Isolated bovine oviduct epithelial cells were cultured on plastic precoated with matrigel. The epithelial cells seeded on 10 mg/ml matrigel often organized themselves into hollow tubes or spheres with microvilli directed towards the lumen. This is the first report of describing the spontaneous tube formation of oviduct epithelial cells in vitro. The epithelial cells growing on this substratum became fully differentiated with the formation of junctional complexes and the production of secretory vesicles which migrated to apical plasmalemma. Epithelial cells seeded on 2 mg/ml matrigel (dry film) formed a subconfluent monolayer in 15-20 days after seeding. The histoarchitecture of the secretory cells growing on the matrigel dry film closely resembled that of intact epithelial cells. Occasional ciliated cells containing large numbers of mitochondria were observed in cell colonies growing on 2 mg/ml matrigel but they possessed very few intact cilia. The monolayer linearly incorporated 35S-methionine into proteins up to 8 hr in presence of estradiol or progesterone. The fluorography of the newly synthesized proteins indicated that the cell extracts of estradiol-stimulated cells contained an additional protein of approximate molecular weight of 60 kd as compared to the extracts of cells incubated without steroids or incubated with progesterone.     

Responses to Stress and Nutrient Availability by the Marine Ultramicrobacterium Sphingomonas sp. Strain RB2256

Sphingomonas sp. strain RB2256 was isolated from Resurrection Bay in Alaska and possibly represents the dominant bacterial species in some oligotrophic marine environments. Strain RB2256 has a high-affinity nutrient uptake system when growing under nutrient-limiting conditions, and growing cells are very small (<0.08 (mu)m(sup3)). These characteristics indicate that RB2256 is highly evolved for withstanding nutrient limitations and grazing pressure by heterotrophic nanoflagellates. In this study, strain RB2256 was subjected to nutrient starvation and other stresses (high temperature, ethanol, and hydrogen peroxide). It was found that growing cells were remarkably resistant, being able to survive at a temperature of 56(deg)C, in 25 mM hydrogen peroxide, or in 20% ethanol. In addition, growing cells were generally as resistant as starved cells. The fact that vegetative cells of this strain are inherently resistant to such high levels of stress-inducing agents indicates that they possess stress resistance mechanisms which are different from those of other nondifferentiating bacteria. Only minor changes in cell volume (0.03 to 0.07 (mu)m(sup3)) and maximum specific growth rate (0.13 to 0.16 h(sup-1)) were obtained for cells growing in media with different organic carbon concentrations (0.8 to 800 mg of C per liter). Furthermore, when glucose-limited, chemostat-grown cultures or multiple-nutrient-starved batch cultures were suddenly subjected to excess glucose, maximum growth rates were reached immediately. This immediate response to nutrient upshift suggests that the protein-synthesizing machinery is constitutively regulated. In total, these results are strong evidence that strain RB2256 possesses novel physiological and molecular strategies that allow it to predominant in natural seawater.     

Biotransformation of isoeugenol to vanillin by a newly isolated Bacillus pumilus strain: identification of major metabolites

A bacterial strain S-1 capable of transforming isoeugenol to vanillin was isolated. The strain was identified as Bacillus pumilus based on biochemical tests, cellular fatty acid composition, riboprint pattern and 16S rRNA gene sequence analyses. In the biotransformation of isoeugenol, vanillin was the main product. With the growing culture of B. pumilus S-1, 10 g l⁻¹ isoeugenol was converted to 3.75 g l⁻¹ vanillin in 150 h, with a molar yield of 40.5% that is the highest up to now. Dehydrodiisoeugenol, a dimer of isoeugenol, was separated by preparative thin layer chromatography and identified by gas chromatography–mass spectrometry. Based on the accurate masses obtained from gas chromatography–high resolution mass spectrometry, two key intermediates, isoeugenol-epoxide (IE) and isoeugenol-diol (ID), were identified by mass spectra interpretations. The biotransformation with resting cells showed that vanillin was oxidized to vanillic acid and then to protocatechuic acid before the aromatic ring was broken. These findings suggest that isoeugenol is degraded through an epoxide-diol pathway.     

Resistance of Vegetative Cells and Microcysts of Myxococcus xanthus

The resistance of vegetative cells and of microcysts of Myxococcus xanthus to several destructive agents was compared. Fruiting-body microcysts were 300 times more resistant to 60 C, 5.4 times more resistant to ultraviolet light, and 19.3 times more resistant to sonic vibration than were vegetative cells. Whereas resistance to sonic vibration developed during the conversion of rods to refractile spheres, resistance to heat did not appear until after the conversion was complete. Both vegetative cells and microcysts of the yellow variant of this strain were more resistant to ultraviolet irradiation than was the tan variant.     

The squamous cell carcinoma cell line OM-1 retains both p75-dependent stratified epithelial progenitor potential and cancer stem cell properties

The low-affinity nerve growth factor receptor p75 is a stratified epithelial stem/progenitor marker of human epithelia. We found OM-1, a human squamous cell carcinoma (SCC) cell line, showed distinct cells with p75 cluster, especially located at the center of a growing colony in a monolayer culture. A cell with p75 cluster was surrounded by cytokeratin 14- and cytokeratin 13-expressing cells that settled at the outer margin of the colony. OM-1 cells were also capable of forming tumor spheres in a cell suspension culture, an ability which was attenuated by the inhibition of p75-signaling. Intriguingly, we also found a p75-negative cell population from a growing culture of OM-1 that re-committed to become p75-clustering cells. These results indicated the possibility that SCC with epithelial multi-layering capacity can exploit the p75-dependent stratified epithelial progenitor property for the cancer stemness.     

Bacteriophage-associated spherical bodies in Bacteroides fragilis.

Unique spherical bodies with multilayered walls were observed by electron microscopy in cells of a single strain of Bacteroides fragilis subsp. fragilis. Phage-like particles were present in the same cells, both free in the cytoplasm and within the spheres. The proportion of cells containing the phage-associated spherical structures ranged from less than 0.01% to about 7% depending on the culture conditions. Phage particles of morphological type B and spherical bodies were also found free in the medium surrounding the cells. Spherical bodies with discontinuities in their walls, through which phage-like particles sometimes appeared to be escaping, were also found both intra- and extracellularly. The biological significance of these distinctive spherical structures is a matter of conjecture.     

Egg-Mass Size and Cell Size: Effects of Temperature on Oxygen Distribution

Two processes strongly influence the distribution of oxygenwithin egg masses and cells: the supply of oxygen by diffusionand the consumption of oxygen by embryos and mitochondria. Theseprocesses are differentially sensitive to temperature. The diffusioncoefficient of oxygen depends only weakly on temperature, havinga Q₁₀ of approximately 1.4. In contrast, the consumption ofoxygen depends strongly on temperature, having a Q₁₀ between1.5 and 4.0. Thus, at higher temperatures, the ratio of oxygensupply to demand decreases. I show, by extending a model ofoxygen distribution within metabolizing spheres, that maximalegg-mass sizes and cell sizes are predicted to be smaller athigher temperatures. For egg masses, definitive data are notyet available. For ectothermic cells, this prediction appearsto be supported; cells from a variety of ectothermic organisms,unicellular and multicellular, are smaller when the cells areproduced at warmer temperatures. Establishing a specific connectionbetween this pattern and oxygen distributions requires demonstrationof (1) oxygen concentration gradients within metabolizing spheresand (2) central oxygen concentrations low enough to affect function.Egg masses from a variety of taxa show steep oxygen concentrationgradients and often are severely hypoxic or anoxic in centrallocations. Severe hypoxia appears capable of retarding developmentor killing embryos. Similar kinds of data for ectothermic cellshave not yet been collected, but the literature on oxygen gradientswithin mammalian cells suggests that intracellular gradientsmay be important.