Craniometric differences between karyotypic races of the common shrew Sorex araneus (Mammalia) as a result of limited hybridization

The contact points of four karyotypic races (St. Petersburg, Moscow, Seliger and West Dvina) of the common shrew Sorex araneus L. were studied at the Valdai Hills (European Russia) in an area unimpeded by geographic barriers. The populations of the races are separated by narrow hybrid zones that represent the most complex heterozygous hybrid karyotypes. At these points of contact, the morphometric differentiation of karyotype races was examined in 12 cranial measurements in 190 shrews of a known karyotype. A comparison of the mean values in studied samples of immature shrews revealed statistically significant differences and the correlation of some measurements which describe the level of musculus temporalis. It has been proposed that morphometric differences in the karyotypic races were preserved and accumulated because of a 50% reduction of the frequencies of hybrids. The deviation from the Hardy-Weinberg ration in the frequencies of the genotype and haploid sets of chromosomes in the hybrid zones can be attributed to a number of fatalities of hybrid embryos or the nonrandom mating of karyotypic races. The ethological isolation might arise in the evolution of some karyotypic races from the reduced fitness of the hybrids.     

Recombination map of the common shrew, Sorex araneus (Eulipotyphla, Mammalia)

The Eurasian common shrew (Sorex araneus L.) is characterized by spectacular chromosomal variation, both autosomal variation of the Robertsonian type and an XX/XY(1)Y(2) system of sex determination. It is an important mammalian model of chromosomal and genome evolution as it is one of the few species with a complete genome sequence. Here we generate a high-precision cytological recombination map for the species, the third such map produced in mammals, following those for humans and house mice. We prepared synaptonemal complex (SC) spreads of meiotic chromosomes from 638 spermatocytes of 22 males of nine different Robertsonian karyotypes, identifying each autosome arm by differential DAPI staining. Altogether we mapped 13,983 recombination sites along 7095 individual autosomes, using immunolocalization of MLH1, a mismatch repair protein marking recombination sites. We estimated the total recombination length of the shrew genome as 1145 cM. The majority of bivalents showed a high recombination frequency near the telomeres and a low frequency near the centromeres. The distances between MLH1 foci were consistent with crossover interference both within chromosome arms and across the centromere in metacentric bivalents. The pattern of recombination along a chromosome arm was a function of its length, interference, and centromere and telomere effects. The specific DNA sequence must also be important because chromosome arms of the same length differed substantially in their recombination pattern. These features of recombination show great similarity with humans and mice and suggest generality among mammals. However, contrary to a widespread perception, the metacentric bivalent tu usually lacked an MLH1 focus on one of its chromosome arms, arguing against a minimum requirement of one chiasma per chromosome arm for correct segregation. With regard to autosomal chromosomal variation, the chromosomes showing Robertsonian polymorphism display MLH1 foci that become increasingly distal when comparing acrocentric homozygotes, heterozygotes, and metacentric homozygotes. Within the sex trivalent XY(1)Y(2), the autosomal part of the complex behaves similarly to other autosomes.     

The genus Sorex (Mammalia, Soricidae)–distribution and evolutionary aspects of Eurasian species

There are about 60 species of shrews of the genus Sorex distributed over the Nearctic and Palaearctic regions; these are usually divided into the subgenera Sorex, Otisorex and Microsorex . The Old World species are listed and their phylogeny discussed, with special emphasis laid on the karyotypes. It is proposed that the Old World forms should be divided into the subgenera Homalurus, Sorex and Otisorex . It is also suggested that the subgenus Sorex could be divided into at least three taxonomic units.     

Evolutionary history of the genus Sorex (Soricidae,Eulipotyphla) as inferred from multigene data

The genus Sorex is one of the most diverse and ecologically successful lineages of the family Soricidae. We present the first multilocus nuclear phylogeny focusing on the nominal subgenus Sorex s.str., which is distributed mainly in the northern Palearctic. The nuclear tree (six exons) provides more resolution than the mitochondrial data (cytb) and supports subdivision into eight species groups within Sorex s.str., most of which correspond to those recognized from chromosome data. The European species S. alpinus is consistently placed as the basal lineage in the Palearctic clade, while the next split separates the east‐Tibetan group of striped shrews (S. aff. cylindricauda, S. bedfordiae, S. excelsus). Within the remaining species, the following well‐supported clades are identified at the supra‐group level: “araneus” species group+S. samniticus; the “caecutiens” group+the “minutus” group, the latter also including S. minutissimus, S. gracillimus and S. thibetanus. S. raddei and S. roboratus represent separate lineages with no close relatives. The fossil‐calibrated molecular clock placed the divergence between Sorex s.str. and Otisorex at the Early/Middle Miocene boundary. Basal radiation of the crown Sorex s.str. was estimated to have occurred in the middle of the Late Miocene. A more than threefold increase in the diversification rate is inferred for the Early Pliocene. Taxonomic implications including potential genus ranks for Sorex s.str. and Otisorex are discussed. S. alpinus is placed in the monotypic subgenus Homalurus. The full species status of S. buchariensis and S. thibetanus and close relationships between S. cf. cansulus and S. caecutiens are confirmed.     

Phylogeography and recolonization of the Swiss Alps by the Valais shrew (Sorex antinorii), inferred with autosomal and sex‐specific markers

Using one male‐inherited, one female‐inherited and eight biparentally inherited markers, we investigate the population genetic structure of the Valais shrew (Sorex antinorii) in the Swiss Alps. Bayesian analysis on autosomal microsatellites suggests a clear genetic differentiation between two groups of populations. This geographically based structure is consistent with two separate postglacial recolonization routes of the species into Switzerland from Italian refugia after the last Pleistocene glaciations. Sex‐specific markers also confirm genetic structuring among western and eastern areas, since very few haplotypes for either Y chromosome or mtDNA genome are shared between the two regions. Overall, these results suggest that two already well‐differentiated genetic lineages colonized the Swiss Alps and came into secondary contact in the Rhône Valley. Low level of admixture between the two lineages is likely explained by the mountainous landscape structure of lateral valleys orthogonal to the main Rhône valley.     

Multiple refugia and barriers explain the phylogeography of the Valais shrew,Sorex antinorii (Mammalia: Soricomorpha)

The aim of the present study was to investigate the genetic structure of the Valais shrew (Sorex antinorii) by a combined phylogeographical and landscape genetic approach, and thereby to infer the locations of glacial refugia and establish the influence of geographical barriers. We sequenced part of the mitochondrial cytochrome b (cyt b) gene of 179 individuals of S. antinorii sampled across the entire species' range. Six specimens attributed to S. arunchi were included in the analysis. The phylogeographical pattern was assessed by Bayesian molecular phylogenetic reconstruction, population genetic analyses, and a species distribution modelling (SDM)‐based hindcasting approach. We also used landscape genetics (including isolation‐by‐resistance) to infer the determinants of current intra‐specific genetic structure. The phylogeographical analysis revealed shallow divergence among haplotypes and no clear substructure within S. antinorii. The starlike structure of the median‐joining network is consistent with population expansion from a single refugium, probably located in the Apennines. Long branches observed on the same network also suggest that another refugium may have existed in the north‐eastern part of Italy. This result is consistent with SDM, which also suggests several habitable areas for S. antinorii in the Italian peninsula during the LGM. Therefore S. antinorii appears to have occupied disconnected glacial refugia in the Italian peninsula, supporting previous data for other species showing multiple refugia within southern refugial areas. By coupling genetic analyses and SDM, we were able to infer how past climatic suitability contributed to genetic divergence of populations. The genetic differentiation shown in the present study does not support the specific status of S. arunchi. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 105 , 864–880.     

Western Siberia rivers and the boundaries between chromosomal races of the common shrew (<Emphasis Type=Italic>Sorex araneus</Emphasis> L. Lipotyphla,Mammalia)

In Western Siberia, most boundaries between common shrew chromosomal races have been found to pass along the banks of rivers, mainly those flowing in the meridional direction. The races Serov and Novosibirsk co-inhabited the right bank of the Irtysh. The easternmost point of the Novosibirsk race has been found on the middle Yenisei River, while the race Tomsk in this area was only on the right (eastern) bank.     

The helminth fauna of the shrew genus Sorex (Insectivora: Soricidae) in the Kandalksha nature reserve

The helminth fauna of shrews (Sores araneus, S. caecutiens, S. minutus, S. minutissimus) from the Karelian coast and islands of the Kandalaksha nature reserve was studied. 18 helminth species belonging to 3 taxonomic groups, Trematoda (3), Cestoda (8), and Nematoda (7) were found. The main body of the helminth fauna of shrews is represented by the nematodes species Longistriata codrus, L. didas, and the cestode species Ditestolepis diaphana. Inhabiting of shrews in the insular localities leads to the decrease of the species diversity and the abundance of their helminths. The distribution ranges of the shrew parasites have been outlined more accurately.     

Relationships among pest flour beetles of the genus Tribolium (Tenebrionidae) inferred from multiple molecular markers

Model species often provide initial hypotheses and tools for studies of development, genetics and molecular evolution in closely related species. Flour beetles of the genus Tribolium Macleay (1825) are one group with potential for such comparative studies. Tribolium castaneum (Herbst 1797) is an increasingly useful developmental genetic system. The convenience with which congeneric and other species of tenebrionid flour beetles can be reared in the laboratory makes this group attractive for comparative studies on a small phylogenetic scale. Here we present the results of phylogenetic analyses of relationships among the major pest species of Tribolium based on two mitochondrial and three nuclear markers (cytochrome oxidase 1, 16S ribosomal DNA, wingless, 28S ribosomal DNA and histone H3). The utility of partitioning the dataset in a manner informed by biological structure and function is demonstrated by comparing various partitioning strategies. In parsimony and partitioned Bayesian analyses of the combined dataset, the castaneum and confusum species groups are supported as monophyletic and as each other's closest relatives. However, a sister group relationship between this clade and Tribolium brevicornis (Leconte 1859) is not supported. The inferred phylogeny provides an evolutionary framework for comparative studies using flour beetles.     

云南省两种兽类新纪录——藏鼩鼱(Sorex thibetanus Kast-schenko,1905)和甘肃鼩鼱(Sorex cansulus Thomas,1912)

目前对藏鼩鼱(Sorex thibetanus)和甘肃鼩鼱(Sorex catnsulus)的分布范围和生物学资料了解较少.2017年,在云南省西北部的高山区域采集了 48号鼩鼱属(Sorex)动物标本.用形态学和基于Cyt b基因的分子系统学对采集标本进行了物种鉴定.结果显示来自4个地点的27号标本形态上与藏鼩鼱相符...     

The microsatellite polymorphism and gene flow in the contact zone of four common shrew (Sorex araneus L., Mammalia) chromosome races

The variation of microsatellite loci in 130 individuals of four common shrew chromosome races (Moscow, Western Dvina, Seliger, and St. Petersburg) contacting on the Valdai Hills was studied. A low level of genetic differences between the chromosome races, which differ at three-five fixed diagnostic metacentric chromosomes, was found. The genetic differentiation within the races is more considerable as compared with that between the races. A high deficiency in heterozygotes was recorded; presumably, this is connected with regular variation in the population sizes. It is assumed that the fixation of centric chromosome fusions was supported by selection (drive) in the evolution of the common shrew against the background of a neutral evolution of the microsatellite loci.     

The neurobiology and behavior of the American water shrew (Sorex palustris)

American water shrews (Sorex palustris) are aggressive predators that dive into streams and ponds to find prey at night. They do not use eyesight for capturing fish or for discriminating shapes. Instead they make use of vibrissae to detect and attack water movements generated by active prey and to detect the form of stationary prey. Tactile investigations are supplemented with underwater sniffing. This remarkable behavior consists of exhalation of air bubbles that spread onto objects and are then re-inhaled. Recordings for ultrasound both above and below water provide no evidence for echolocation or sonar, and presentation of electric fields and anatomical investigations provide no evidence for electroreception. Counts of myelinated fibers show by far the largest volume of sensory information comes from the trigeminal nerve compared to optic and cochlear nerves. This is in turn reflected in the organization of the water shrew’s neocortex, which contains two large somatosensory areas and much smaller visual and auditory areas. The shrew’s small brain with few cortical areas may allow exceptional speed in processing sensory information and producing motor output. Water shrews can accurately attack the source of a water disturbance in only 50 ms, perhaps outpacing any other mammalian predator.     

Morphometric and pelage color variation of two sibling species of shrew (Mammalia: Soricomorpha)

Pelage color variants have been documented in some small mammals, but there is not any reported about coat color variation in shrews. Here, pelage color variants of the two sibling species (Sorex cylindricauda and Sorex bedfordiae) were uncovered in different sampling sites. Our data may initiate new interest to pelage color variants in small mammals. Furthermore, the classification of two striped shrews has been controversial for several decades. We conducted a detailed examination of the morphometric characters for the two sibling shrews. Significant differences between the two species morphologically confirmed the two-species classification status.     

Isolation and characterization of polymorphic microsatellite DNA markers in two shrew species,Sorex unguiculatus and S. caecutiens

We isolated six microsatellite markers from the partial genomic libraries of two Sorex shrews, S. unguiculatus and S. caecutiens, and examined their allelic variation. All loci showed high allelic variation ranging from 15 to 19 alleles and all but one locus conformed to Hardy–Weinberg expectations in the species where the loci were isolated. Cross-species amplifications showed that all primers derived from S. unguiculatus were useful for S. caecutiens, while among primer sets derived from S. caecutiens only one was useful for S. unguiculatus. Accordingly, at least five microsatellite markers were useful in S. caecutiens and three in S. unguiculatus.     

Holarctic phylogeography of the tundra shrew (Sorex tundrensis) based on mitochondrial genes

A range‐wide phylogeographic study of the tundra shrew (Sorex tundrensis) was performed using cytochrome b and cytochrome oxidase I (COI) mitochondrial genes. The results based on 121 specimens from 42 localities demonstrate that the tundra shrew is divided into five main mitochondrial DNA phylogenetic lineages with largely parapatric distribution. In addition to a single Nearctic clade (Alaska) four Palearctic clades are identified: Western (Northen Urals, Kazakhstan, South‐West Siberia), Eastern (from East Transbaikalia and the Middle Amur to Chukotka), South Central (Central Siberia, the Altai, the Dzhungarian Alatau) and North Central (Northern Siberia, Central Yakutia). Date estimates obtained by use of a molecular clock corrected for potential rate decay suggest Late Pleistocene age for the most recent common ancestor of all contemporary tundra shrew populations. Relatively high genetic divergence between phylogroups (0.95–1.6%) indicates that the observed phylogeographic structure was initiated by historical events that predated the Last Glacial Maximum. We assume that, being more cold‐ and arid‐tolerant, tundra shrew underwent expansion during an early cold phase of the Last Glacial and spread through its recent range earlier than most of other Siberian red‐toothed shrews. Comparative phylogeographic analysis of Siberian shrews and rodents suggests that evolutionary histories of species associated with azonal or open habitats show important differences compared to forest species. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 101 , 721–746.     

Alps,genes, and chromosomes: their role in the formation of species in the Sorex araneus group (Mammalia,Insectivora), as inferred from two hybrid zones

During the Pleistocene glaciations, the Alps were an efficient barrier to gene flow between isolated populations, often leading to allopatric speciation. Afterwards, the Alps strongly influenced the post-glacial recolonization of Europe and represent a major suture zone between differentiated populations. Two hybrid zones in the Swiss and French Alps between genetically and chromosomally well-differentiated species-the Valais shrew, Sorex antinorii, and the common shrew, S. araneus-were studied karyotypically and by analyzing the distribution of seven microsatellite loci. In the center of the Haslital hybrid zone the two species coexist over a distance of 900 m. Hybrid karyotypes, among them the most complex known in Sorex, are rare. F-statistics based on microsatellite data revealed a strong heterozygote deficit only in the center of the zone, due to the sympatric distribution of the two species with little hybridization between them. Structuring within the species (both F(IS) and F(ST)) was low. An hierarchical analysis showed a high level of interspecific differentiation. Results were compared with those previously reported in another hybrid zone located at Les Houches in the French Alps. Genetic structuring within and between species was comparable in both hybrid zones, although chromosomal incompatibilities are more important in Haslital, where a linkage block of the race-specific chromosomes should additionally impede gene flow. Evidence for a more restricted gene flow in Haslital comes from the genetically intermediate hybrid karyotypes, whereas in Les Houches, hybrid karyotypes are genetically identical to individuals of the pure karyotypic races. Genic and chromosomal introgression was observed in Les Houches, but not in Haslital. The possible influence of a river, separating the two species at Les Houches, on gene flow is discussed.     

Phylogenetic relationships among species of Prunus as inferred by isozyme markers

Summary An isozyme survey of 34 species of Prunus representing subgenera Prunus, Amygdalus, Cerasus, and Lithocerasus detected 110 presumptive alleles at 11 isozyme loci. Principal component analysis was conducted on the covariance matrix derived from allelic frequencies calculated for each species. Cluster analysis was performed on the first 30 principal components. Results generally support traditional classification of Prunus at the subgeneric level, except for members of subgenus Lithocerasus and two members of subgenus Amygdalus. Prunus glandulosa Thunb., P. japonica Thunb., and P. tomentosa Thunb. of subgenus Lithocerasus and P. triloba Lindl. of subgenus Amygdalus appear to represent primitive species. P. besseyi Bailey and P. pumila L. of subgenus Lithocerasus and P. andersonii of subgenus Amygdalus should be assigned to subgenus Prunus. Placement of its members indicates that subgenus Lithocerasus is an artificial grouping of species that are very different genetically although similar phenotypically.Paper No. 12529 of the Journal Series of the North Carolina Agricultural Research Service, Raleigh, NC 27695-7643, USA