植物挥发性信号物质介导抗性的生态功能

植物产生的挥发性化合物能够作为媒介参与植物与周围环境之间的信息交流及相互作用。植物挥发性物质在吸引传粉者、促进种子传播、抑制其它植物种子萌发等方面具有重要的作用。近年来,关于植物挥发性物质在生态系统中的信号作用研究已经成为国内外的研究热点,受到广泛关注。总结了植物挥发性物质作为信号物质在提高植物抗性方面的国内外研究成果,阐述了植物挥发性物质不仅能够直接提高植物的抗性,而且可以作为信号物质在同株、同种异株和不同种植物之间进行传递,进而间接提高目标植物的抗性。最后,还对植物挥发性物质的研究方法和潜在的生态功能进行了探讨。     

Volatile organic compounds in the salt-lake sediments of the Tibet Plateau influence prokaryotic diversity and community assembly

Extremophiles - Volatile organic compounds (VOCs) are important environmental factors because they supply nutrients for microbial cells and mediate intercellular interactions. However, few studies...     

Feasibility study of a compact process for biological treatment of highly soluble VOCs polluted gaseous effluent.

Volatile organic compounds (VOCs), representing a wide range of products mainly generated by industrial activity, are involved in air pollution. This study deals with a new biological treatment process of gaseous effluent combining a gas/liquid contactor called an "aero-ejector" and a membrane bioreactor. Combining these two innovative technologies enables a high elimination efficiency to be reached.We first focus on transfer phenomena characterization in a pilot installation on a laboratory scale, using a gaseous effluent polluted with a low ethanol concentration (7.1 x 10(-3) kg.m(-3)). These experiments demonstrated the good transfer performances since 90% of the ethanol was absorbed in the liquid phase in one step. After this physical characterization, the biological aspect of the system was studied using the yeast Candida utilis as microorganism. During the experiment, no ethanol was measured in the fermentation broth nor in the outlet gas, confirming the efficiency of ethanol elimination by C. utilis. The experimental procedure emerging from the present study strongly validates the suitability of this process for ethanol removal from air.     

Antimicrobial volatile organic compounds affect morphogenesis-related enzymes in Guignardia citricarpa,causal agent of citrus black spot

Although non-volatile substances toxic to plant pathogenic microorganisms have been extensively studied over the years, few studies have focused on microbial volatile organic compounds (VOCs). The VOCs produced by the yeast Saccharomyces cerevisiae strain CR-1, used in fermentative processes for fuel ethanol production, are able to inhibit the vegetative development of the fungus Guignardia citricarpa, causal agent of the disease citrus black spot. How microbial VOCs affect the development of fungi is not known. Thus, the objective of the present work was to study the effect of the artificial mixture of VOCs identified from S. cerevisiae on intracellular enzymes involved in the mycelial morphogenesis in G. citricarpa. The phytopathogenic fungus was exposed to artificial mixture of VOCs constituted by alcohols (ethanol, 3-methyl-1-butanol, 2-methyl-1-butanol and phenylethyl alcohol) and esters (ethyl acetate and ethyl octanoate) in the proportions naturally found in the atmosphere produced by the yeast. The VOCs inhibited considerably the mycelial development and interfered negatively with the production of the morphogenesis-related enzymes. After 72 h of exposure to the VOCs the laccase and tyrosinase activities decreased 46 and 32%, respectively, however, the effect on the chitinase and β-1,3-glucanase activities was lower, 17 and 13% of inhibition, respectively. Therefore, the exposure of the fungus to the antimicrobial volatiles can influence both fungal mycelial growth rate and activity of enzymes implicated in morphogenesis. This knowledge is important to understand the microbial interactions mediated by VOCs in nature and to develop new strategies to control plant pathogens as G. citricarpa in postharvest.     

Post-mortem volatiles of vertebrate tissue

Volatile emission during vertebrate decay is a complex process that is understood incompletely. It depends on many factors. The main factor is the metabolism of the microbial species present inside and on the vertebrate. In this review, we combine the results from studies on volatile organic compounds (VOCs) detected during this decay process and those on the biochemical formation of VOCs in order to improve our understanding of the decay process. Micro-organisms are the main producers of VOCs, which are by- or end-products of microbial metabolism. Many microbes are already present inside and on a vertebrate, and these can initiate microbial decay. In addition, micro-organisms from the environment colonize the cadaver. The composition of microbial communities is complex, and communities of different species interact with each other in succession. In comparison to the complexity of the decay process, the resulting volatile pattern does show some consistency. Therefore, the possibility of an existence of a time-dependent core volatile pattern, which could be used for applications in areas such as forensics or food science, is discussed. Possible microbial interactions that might alter the process of decay are highlighted.     

Sponge-associated microbial Antarctic communities exhibiting antimicrobial activity against Burkholderia cepacia complex bacteria

The aerobic heterotrophic bacterial communities isolated from three different Antarctic sponge species were analyzed for their ability to produce antimicrobial compounds active toward Cystic Fibrosis opportunistic pathogens belonging to the Burkholderia cepacia complex (Bcc). The phylogenetic analysis performed on the 16S rRNA genes affiliated the 140 bacterial strains analyzed to 15 genera. Just three of them (Psychrobacter, Pseudoalteromonas and Arthrobacter) were shared by the three sponges. The further Random Amplified Polymorphic DNA analysis allowed to demonstrate that microbial communities are highly sponge-specific and a very low degree of genus/species/strain sharing was detected. Data obtained revealed that most of these sponge-associated Antarctic bacteria and belonging to different genera were able to completely inhibit the growth of bacteria belonging to the Bcc. On the other hand, the same Antarctic strains did not have any effect on the growth of other pathogenic bacteria, strongly suggesting that the inhibition is specific for Bcc bacteria. Moreover, the antimicrobial compounds synthesized by the most active Antarctic bacteria are very likely Volatile Organic Compounds (VOCs), a finding that was confirmed by the SPME-GC-MS technique, which revealed the production of a large set of VOCs by a representative set of Antarctic bacteria. The synthesis of these VOCs appeared to be related neither to the presence of pks genes nor the presence of plasmid molecules. The whole body of data obtained in this work indicates that sponge-associated bacteria represent an untapped source for the identification of new antimicrobial compounds and are paving the way for the discovery of new drugs that can be efficiently and successfully used for the treatment of CF infections.     

Polycyclic aromatic hydrocarbons and volatile organic compounds in biochar and biochar‐amended soil: a review

Residual pollutants including polycyclic aromatic hydrocarbons (PAHs), volatile organic compounds (VOCs), and carbon (aceous) nanoparticles are inevitably generated during the pyrolysis of waste biomass and remain on the solid coproduct called biochar. Such pollutants could have adverse effects on the plant growth as well as microbial community in soil. Although biochar has been proposed as a ‘carbon negative strategy’ to mitigate the greenhouse gas emissions, the impacts of its application with respect to long‐term persistence and bioavailability of hazardous components are not clear. Moreover, the co‐occurrence of low molecular weight VOCs with PAHs in biochar may exert further phytotoxic effects. This review describes the basic need to unravel key mechanisms driving the storage vs. emission of these organics and the dynamics between the sorbent (biochar) and soil microbes. Moreover, there is an urgent need for standardized methods for quantitative analysis of PAHs and VOCs in biochar under environmentally relevant conditions. This review is also extended to cover current research gaps including the influence of biochar application on the short‐ and long‐term fate of PAHs and VOCs and the proper control tactics for biochar quality and associated risk.     

Production of volatile organic compounds by an antagonistic strain Paenibacillus polymyxa WR-2 in the presence of root exudates and organic fertilizer and their antifungal activity against Fusarium oxysporum f. sp. niveum

The volatile organic compounds (VOCs) produced by antagonistic microbes have great antifungal potential against soil-borne fungal pathogens. The VOCs produced by Paenibacillus polymyxa strain WR-2 in the presence of root exudates and organic fertilizer were identified and their effects on the growth and spore germination of Fusarium oxysporum f. sp. niveum were evaluated. The VOCs produced by WR-2 inhibited the growth of F. oxysporum by 38%, 36% and 40% in agar medium, sterilized soil and natural soil, respectively. This inhibitory effect was increased to 60%, 58% and 64% with the addition of organic fertilizer in agar medium, sterilized soil and natural soil, respectively. The addition of root exudates did not affect the production of antifungal VOCs by WR-2. The VOCs produced by WR-2 completely inhibited the germination of F. oxysporum spores. Out of 42 identified VOCs, seven VOCs; benzothiazole, benzaldehyde, undecanal, dodecanal, hexadecanal, 2-tridecanone and phenol were found to inhibit the growth of F. oxysporum. The results of these experiments suggest another significance of using organic fertilizer as a carrier material with the biocontrol agents to control soil-borne fungal pathogens.     

Structural and functional responses of sewage microbial communities used for the treatment of a complex mixture of volatile organic compounds (VOCs)

Aims:  The aim of this work was to assess the impact of the applied mass loading on the selection of an efficient microbial community able to degrade a complex mixture of volatile organic compounds (VOCs).
Methods and Results:  Two reactors were used and were supplied with a gaseous effluent containing 11 VOCs with different concentrations. The response of the microflora was monitored as a function of time: biodegradation activity, bacterial density and diversity. The results showed that the applied mass loading seems to have an impact on the functioning and the genetic structure of the bacterial community.
Conclusions:  A high mass loading seems to induce a low efficient functioning in terms of elimination efficiency and a simplification of the genetic structure of the total bacterial community with the apparition of a dominant microflora. A low mass loading seems to favour a better functioning and allows to keep a healthier bacterial diversity.
Significance and Impact of the Study:  In the treatment processes of gaseous effluents, it would be judicious to define the functioning parameters of the process to keep the diversity of important functional bacterial groups. These results provide also useful information about changes in microbial communities following natural or anthropogenic alterations in different ecosystems.     

Effect of different cultivation conditions on the production of volatile organic compounds by the microalgae Arthrospira platensis and Chlorella sp.

Journal of Applied Phycology - Volatile organic compounds (VOCs) from microalgae have many applications in several industries, and their synthesis can be affected by several factors, such as light...     

Muscodor albus and its biological promise

We have found a novel fungal genus that produces extremely bioactive volatile organic compounds (VOCs). This fungal isolate was initially discovered as an endophyte in Cinnamomum zeylanicum in a botanical garden in Honduras. This endophytic fungus, Muscodor albus, produces a mixture of VOCs that are lethal to a wide variety of plant and human pathogenic fungi and bacteria. It is also effective against nematodes and certain insects. The mixture of VOCs has been analyzed using GC/MS and consists primarily of various alcohols, acids, esters, ketones, and lipids. Final verification of the identity of the VOCs was carried out by using artificial mixtures of the putatively identified compounds and showing that the artificial mixture possessed the identical retention times and mass spectral qualities as those of the fungal derived substances. Artificial mixtures of the VOCs nicely mimicked the biological effects of the fungal VOCs when tested against a wide range of fungal and bacterial pathogens. Potential applications for “mycofumigation” by M. albus are currently being investigated and include uses for treating various plant parts, and human wastes. Another promising option includes its use to replace methyl bromide fumigation as a means to control soil-borne plant diseases.     

Inhibition of biofilm formation on silicone rubber samples using various antimicrobial agents

High-temperature-cured silicone rubber samples (silicone rubber (SIR) based on polydimethylsiloxane (PDMS)) and SIR samples containing three different antimicrobial agents, sodium benzoate (NaB), DCOIT (4,5 Dichloro-2-octyl-2H-isothiazolone-one) and p-aminobenzoic acid (PABA) were inoculated with fungal spore suspensions and incubated for 28 days at 29 ± 1 °C and ≥90% humidity, according to the ISO 846:1997(E) protocol. Prior to the biodegradation test, a powder test was conducted to study the efficacy of the chosen antimicrobial compounds and to determine the correct concentration of the compounds for sample preparation. The extent of the microbial growth was studied visually and by Scanning Electron Microscopy (SEM). Changes in surface hydrophobicity and surface chemical composition were studied by contact angle measurements and Fourier Transform Infrared (FTIR) spectroscopy, respectively. Microbial growth and biofilm formation were observed on the surface of reference samples. DCOIT was the most effective antimicrobial agent, as demonstrated by the lack of microbial growth and unaltered surface hydrophobicity. On the surface of samples containing NaB, an initiation of microbial growth and therefore a slight change in surface hydrophobicity was observed. PABA did not inhibit the fungal growth.     

Recent advances in two-phase partitioning bioreactors for the treatment of volatile organic compounds

Biological processes are considered to be the most cost-effective technology for the off-gas treatment of volatile organic compounds (VOC) at low concentrations. Two-phase partitioning bioreactors (TPPBs) emerged in the early 1990s as innovative multiphase systems capable of overcoming some of the key limitations of traditional biological technologies such as the low mass transfer rates of hydrophobic VOCs and microbial inhibition at high VOC loading rates. Intensive research carried out in the last 5 years has helped to provide a better understanding of the mass transfer phenomena and VOC uptake mechanisms in TPPBs, which has significantly improved the VOC biodegradation processes utilizing this technology platform. This work presents an updated state-of-the-art review on the advances of TPPB technology for air pollution control. The most recent insights regarding non-aqueous phase (NAP) selection, microbiology, reactor design, mathematical modeling and case studies are critically reviewed and discussed. Finally, the key research issues required to move towards the development of efficient and stable full-scale VOC biodegradation processes in TPPBs are identified.     

Volatiles from soil‐borne fungi affect directional growth of roots

Volatiles play major roles in mediating ecological interactions between soil (micro)organisms and plants. It is well‐established that microbial volatiles can increase root biomass and lateral root formation. To date, however, it is unknown whether microbial volatiles can affect directional root growth. Here, we present a novel method to study belowground volatile‐mediated interactions. As proof‐of‐concept, we designed a root Y‐tube olfactometer, and tested the effects of volatiles from four different soil‐borne fungi on directional growth of Brassica rapa roots in soil. Subsequently, we compared the fungal volatile organic compounds (VOCs) previously profiled with Gas Chromatography–Mass Spectrometry (GC–MS). Using our newly designed setup, we show that directional root growth in soil is differentially affected by fungal volatiles. Roots grew more frequently toward volatiles from the root pathogen Rhizoctonia solani, whereas volatiles from the other three saprophytic fungi did not impact directional root growth. GC–MS profiling showed that six VOCs were exclusively emitted by R. solani. These findings verify that this novel method is suitable to unravel the intriguing chemical cross‐talk between roots and soil‐borne fungi and its impact on root growth.     

Microbial community related to volatile organic compound (VOC) emission in household biowaste

Malodorous emissions and potentially pathogenic microorganisms which develop during domestic organic waste collection are not only a nuisance but may also pose health risks. The aim of the present study was to determine whether the presence of specific microorganisms in biowastes is directly related to the composition of the emitted volatile organic compounds (VOCs). The succession of microbial communities during 16 days of storage in organic waste collection bins was studied by denaturing gradient gel electrophoresis (DGGE) of amplified 16S ribosomal DNA in parallel with a classical cultivation and isolation approach. Approximately 60 different bacterial species and 20 different fungal species were isolated. Additionally, some bacterial species were identified through sequencing of excised DGGE bands. Proton transfer reaction mass spectrometry (PTR-MS) was used to detect VOCs over the sampling periods, and co-inertia analyses of VOC concentrations with DGGE band intensities were conducted. Positive correlations, indicating production of the respective VOC or enhancement of microbial growth, and negative correlations, indicating the use of, or microbial inhibition by the respective compound, were found for the different VOCs. Measurement of the VOC emission pattern from a pure culture of Lactococcus lactis confirmed the positive correlations for the protonated masses 89 (tentatively identified as butyric acid), 63 (tentatively identified as dimethylsulfide), 69 (likely isoprene) and 73 (likely butanone).     

Impacts of dietary amino acid composition and microbial presence on preference and performance of immature Lucilia sericata (Diptera: Calliphoridae)

1. As primary colonisers of ephemeral resources, the common green bottle fly, Lucilia sericata, must exercise efficient resource exploitation strategies to maximise fitness. Foraging incurs costs, so the efficient evaluation of resources is essential for individuals relying on fragmented patches whose dissimilarity may result in fitness consequences for offspring. Thus, selective pressures between carrion‐using insects and carrion‐associated microbes are expected to occur. 2. Microbes play a pivotal role in adult fly assessment of resources via production of volatile organic compounds (VOCs) resulting from the breakdown of essential amino acids. If one assumes that chemoreception of these VOCs provides public information regarding the corresponding essential amino acids, the resulting effects on maternal decision‐making could impact larval resource exploitation. 3. The essential amino acids phenylalanine, methionine, valine, and tryptophan, the corresponding VOCs of which are known fly attractants, were used to construct imbalanced diets with and without antimicrobial treatment to investigate the impact of suboptimal food sources on larval L. sericata. 4. The results of this study demonstrate that both amino acid composition and microbial presence influence behaviour, with larvae displaying a preference for untreated diets lacking methionine and a complete reversal in preference for antimicrobial‐treated diets. This interaction between diet and antimicrobial treatment indicates that the presence of microbes that produce essential amino acids may impact larval resource utilisation strategies. This investigation into larval performance on diets deficient in amino acids that provide important VOC cues to maternal flies provides a stepping stone for dissecting larval behavioural strategies on ephemeral resources when faced with limited choices.     

植物释放挥发性有机物(VOCs)的研究进展

植物释放的有机物(VOCs)对大气圈臭氧的动态、一氧化碳的产生和甲烷的氧化起重要作用。本文主要综述了异戊二烯、单萜这两种重要的植物释放物,总结了国内外的研究进展,概括了它们的合成、释放以及环境因子的影响。同时简要介绍了其它几种植物释放的有机物,并就有机物的释放对大气化学、温室效应和全球变化的影响也作了简要分析。