Modelling the Interior Structure of Enceladus Based on the 2014’s Cassini Gravity Data

We present a model for the internal structure of Saturn’s moon Enceladus. This model allows us to estimate the physical conditions at the bottom of the satellite’s potential subsurface water reservoir and to determine the radial distribution of pressure and gravity. This leads to a better understanding of the physical and chemical conditions at the water/rock boundary. This boundary is the most promising area on icy moons for astrobiological studies as it could serve as a potential habitat for extraterrestrial life similar to terrestrial microbes that inhabit rocky mounds on Earth’s sea floors.     

Spawning behavior of the tiger grouper (<Emphasis Type="Italic">Mycteroperca tigris</Emphasis>) in a Caribbean atoll

Many grouper (Epinephelidae) species aggregate to spawn at specific times of year, at consistent locations, and at specific times of day and phases of the moon. The tiger grouper (Mycteroperca tigris) is widely distributed in the Caribbean Sea and aggregates to spawn just after the full moon. In January and February 2003–2005, we conducted visual surveys of a tiger grouper spawning aggregation at Glover’s Reef, Belize. The primary objectives of this study were to describe grouper spawning activities with respect to the timing of the lunar cycle, identify and describe male and female spawning behaviors, and estimate the number of grouper spawning events each day. The peak number of both male and female tiger groupers counted each year occurred from 6 to 10 d after the full moon. The peak count of males was 1.6–2.2 times greater than the peak count of females. Six categories of male–male and six categories of male–female interactions were identified. All male tiger groupers displayed an ability to rapidly change color; this was often triggered by a close encounter with other male or female tiger groupers. The daily spawning activity was remarkably predictable. The first spawning occurred on average 8.1 min before sunset, and the last occurred 5.1 min after sunset. On average, less than half of the females at the spawning site spawned each day, but some females spawned more than once in a given day. Females appeared to choose their mates.     

Survivability of Bacteria Ejected from Icy Surfaces after Hypervelocity Impact

Both the Saturnian and Jovian systems contain satellites with icy surfaces. If life exists on any of these icy bodies (in putative subsurface oceans for example) then the possibility exists for transfer of life from icy body to icy body. This is an application of the idea of Panspermia, wherein life migrates naturally through space. A possible mechanism would be that life,here taken as bacteria, could become frozen in the icy surface ofone body. If a high-speed impact occurred on that surface, ejectacontaining the bacteria could be thrown into space. It could thenmigrate around the local region of space until it arrived at a second icy body in another high-speed impact. In this paper we consider some of the necessary steps for such a process to occur,concentrating on the ejection of ice bearing bacteria in the initial impact, and on what happens when bacteria laden projectiles hit an icy surface. Laboratory experiments using high-speed impacts with a light gas gun show that obtaining icy ejecta with viable bacterial loads is straightforward. In addition to demonstrating the viability of the bacteria carried on the ejecta, we have also measured the angular and size distribution of the ejecta produced in hypervelocity impacts on ice. We have however been unsuccessful at transferring viablebacteria to icy surfaces from bacteria laden projectilesimpacting at hypervelocities.     

Ocean Wave Simulation Based on Wind Field

Ocean wave simulation has a wide range of applications in movies, video games and training systems. Wind force is the main energy resource for generating ocean waves, which are the result of the interaction between wind and the ocean surface. While numerous methods to handle simulating oceans and other fluid phenomena have undergone rapid development during the past years in the field of computer graphic, few of them consider to construct ocean surface height field from the perspective of wind force driving ocean waves. We introduce wind force to the construction of the ocean surface height field through applying wind field data and wind-driven wave particles. Continual and realistic ocean waves result from the overlap of wind-driven wave particles, and a strategy was proposed to control these discrete wave particles and simulate an endless ocean surface. The results showed that the new method is capable of obtaining a realistic ocean scene under the influence of wind fields at real time rates.     

Ocean circulation and terrestrial runoff dynamics in the Mesoamerican region from spectral optimization of SeaWiFS data and a high resolution simulation

The evolution in time and space of terrestrial runoff in waters of the Mesoamerican region was examined using remote sensing techniques combined with river discharge and numerical ocean circulation models. Ocean color SeaWiFS images were processed using a new Spectral Optimization Algorithm for atmospheric correction and ocean property retrieval in Case-2 waters. A total of 157 SeaWiFS images were collected between 1997 and 2006 and processed to produce Colored Detrital Material images of the Mesoamerican waters. Monthly terrestrial runoff load and river discharge computed with a land-elevation model were used as input to a numerical model, which simulated the transport of buoyant matter from terrestrial runoff. Based on land cover for years 2003–2004, modeling results showed that the river discharge seasonality was correlated with the image averaged CDM, and the simulated plume reproduces the spatial patterns and temporal evolution of the observed CDM plume. River discharge peaked in August and CDM peaked from September to January. The buoyant matter concentration was high from October to January, and was at its lowest from March to April. Between October and December the plume was transported out of the Mesoamerican waters by a cyclonic gyre located north of Honduras. Part of the runoff from Honduras was transported towards Chinchorro Banks and the Yucatan Channel, part re-circulated into the Gulf of Honduras, and part taken toward the outside of the Mesoamerican Barrier Reef System. This study shows that all the reefs of the MBRS, including the most offshore atolls of the region, are under the influence of terrestrial runoff on a seasonal basis, with maximum effect during October to January, and minimum from March to April. Furthermore, what is seen as a giant plume in satellite images is in fact composed of runoffs of different ages.     

基于目标检测的东北虎个体自动识别

东北虎个体的自动识别是种群数量评估和制定有效保护策略的重要基础。以东北虎林园和怪坡虎园38 只虎为研究对象,将目标检测方法首次应用到东北虎个体识别研究中,采用多种深度卷积神经网络模型,以实现虎个体的自动识别。首先通过相机在不同角度对 38 只东北虎进行拍摄取样,建立包含13579张图像的虎样本数据集。由于虎的体侧条纹信息不具有对称性,所以运用单次多盒目标检测（Single Shot MultiBox Detector, SSD）方法,对虎的躯干左侧条纹、右侧条纹以及脸部等不同部位图像,进行自动检测并分割提取,极大节省手工截取时间。在检测分割出的左右侧及脸部不同部位图片基础上,运用上、下、左、右平移变换进行数据增强,使图片数目扩大为原来的5 倍。采用LeNet、AlexNet、ZFNet、VGG16、ResNet34共5 种卷积神经网络模型进行个体自动识别。为了提高识别准确率,运用平均值和最大值不同组合方式来优化池化操作,并在全连接层引入概率分别为0.1、0.2、0.3、0.4的丢弃（Dropout）操作防止过拟合。实验表明,目标检测模型耗时较少,截取分割老虎不同部位条纹能达到0.6 s/张,远快于人工截取速度,并且在测试集上准确率能达到97.4%。不同姿态下的目标部位都能正确识别并分割。ResNet34模型的准确率优于其他网络模型,左右侧条纹以及脸部图像识别准确率分别为93.75%、97.01%和 86.28%,右侧条纹识别准确率优于左侧条纹和脸部图像。研究为野生虎自动相机影像的识别提供技术参考。在未来研究中,对东北虎个体影响数据进行扩充,选取更多影像数据进行训练,使网络具有更强的适应性,从而实现更准确的个体识别。     

Modulation of the lipid binding properties of the N-terminal domain of human apolipoprotein E3.

Apolipoprotein E (apoE) plays a critical role in plasma lipid homeostasis through its function as a ligand for the low-density lipoprotein (LDL) receptor family. Receptor recognition is mediated by residues 130-150 in the independently folded, 22-kDa N-terminal (NT) domain. This elongated globular four-helix bundle undergoes a conformational change upon interaction with an appropriate lipid surface. Unlike other apolipoproteins, apoE3 NT failed to fully protect human LDL from aggregation induced by treatment with phospholipase C. Likewise, in dimyristoylglycerophosphocholine (Myr2Gro-PCho) vesicle transformation assays, 100 microg apoE3 NT induced only 15% reduction in vesicle (250 microg) light scattering intensity after 30 min. ApoE3 NT interaction with modified lipoprotein particles or Myr2Gro-PCho vesicles was concentration-dependent whereas the vesicle transformation reaction was unaffected by buffer ionic strength. In studies with the anionic phospholipid dimyristoylglycerophosphoglycerol, apoE3 NT-mediated vesicle transformation rates were enhanced > 10-fold compared with Myr2Gro-PCho and activity decreased with increasing buffer ionic strength. Solution pH had a dramatic effect on the kinetics of apoE3 NT-mediated Myr2Gro-PCho vesicle transformation with increased rates observed as a function of decreasing pH. Fluorescence studies with a single tryptophan containing apoE3 NT mutant (L155W) revealed increased solvent exposure of the protein interior at pH values below 4.0. Similarly, fluorescent dye binding experiments with 8-anilino-1-naphthalene sulfonate revealed increased exposure of apoE3 NT hydrophobic interior as a function of decreasing pH. These studies indicate that apoE3 NT lipid binding activity is modulated by lipid surface properties and protein tertiary structure.     

Europa as an Abode of Life

Life as we know it on Earth depends on liquid water, a suite of `biogenic' elements (most famously carbon) and a useful source of free energy. Here we review Europa's suitability for life from the perspective of these three requirements. It is likely, though not yet certain, that Europa harbors a subsurface ocean of liquid water whose volume is about twice that of Earth's oceans. Little is known about Europa's inventory of carbon, nitrogen, and other biogenic elements, but lower bounds on these can be placed by considering the role of cometary delivery over Europa's history. Sources of free energy are challenging for a world covered with an ice layer kilometers thick, but it is possible that hydrothermal activity and/or organics and oxidants provided by the action of radiation chemistry at Europa's surface and subsequent mixing into Europa's ocean could provide the electron donors and acceptors needed to power a Europan ecosystem. It is not premature to draw lessons from the search for life on Mars with the Viking spacecraft for planning exobiological missions to Europa.     

BOOK REVIEWS

Book reviewed in this article:
M eacham , C. J. 1997. How the tiger lost its stripes. An exploration into the endangerment of a species .     

Microbial ecology of the subsurface at an abandoned creosote waste site

Summary The microbial ecology of pristine, slightly contaminated, and heavily contaminated subsurface materials, and four subsurface materials on the periphery of the plume at an abandoned creosote waste site was investigated. Except for the unsaturated zone of the heavily contaminated material, mineralization of glucose (13.5 ppb) indicated a metabolically active microflora in all subsurface materials. However, mineralization (<40%) of naphthalene, phenanthrene, and 2-methylnaphthalene was observed in contaminated material and material from the periphery of the plume, but not in pristine material. Pentachlorophenol was mineralized in material from the periphery of the plume. Inorganic and organic nutrient amendments and changes in pH and temperature did not increase the extent of mineralization of the aromatic compounds. An array of organic compounds found in creosote were biotransformed in contaminated ground water; however some compounds were still detected after 7 months of incubation. The data suggest that the subsurface microflora in slightly and heavily contaminated subsurface materials and materials from the periphery of the plume has adapted to degrade many compounds found in creosote.     

Mississippi River and sea surface height effects on oil slick migration

Millions of barrels of oil escaped into the Gulf of Mexico (GoM) after the 20 April, 2010 explosion of Deepwater Horizon (DH). Ocean circulation models were used to forecast oil slick migration in the GoM, however such models do not explicitly treat the effects of secondary eddy-slopes or Mississippi River (MR) hydrodynamics. Here we report oil front migration that appears to be driven by sea surface level (SSL) slopes, and identify a previously unreported effect of the MR plume: under conditions of relatively high river discharge and weak winds, a freshwater mound can form around the MR Delta. We performed temporal oil slick position and altimeter analysis, employing both interpolated altimetry data and along-track measurements for coastal applications. The observed freshwater mound appears to have pushed the DH oil slick seaward from the Delta coastline. We provide a physical mechanism for this novel effect of the MR, using a two-layer pressure-driven flow model. Results show how SSL variations can drive a cross-slope migration of surface oil slicks that may reach velocities of order km/day, and confirm a lag time of order 5-10 days between mound formation and slick migration, as observed form the satellite analysis. Incorporating these effects into more complex ocean models will improve forecasts of slick migration for future spills. More generally, large SSL variations at the MR mouth may also affect the dispersal of freshwater, nutrients and sediment associated with the MR plume.     

Reef-Fidelity and Migration of Tiger Sharks,Galeocerdo cuvier,across the Coral Sea

Knowledge of the habitat use and migration patterns of large sharks is important for assessing the effectiveness of large predator Marine Protected Areas (MPAs), vulnerability to fisheries and environmental influences, and management of shark–human interactions. Here we compare movement, reef-fidelity, and ocean migration for tiger sharks, Galeocerdo cuvier, across the Coral Sea, with an emphasis on New Caledonia. Thirty-three tiger sharks (1.54 to 3.9 m total length) were tagged with passive acoustic transmitters and their localised movements monitored on receiver arrays in New Caledonia, the Chesterfield and Lord Howe Islands in the Coral Sea, and the east coast of Queensland, Australia. Satellite tags were also used to determine habitat use and movements among habitats across the Coral Sea. Sub-adults and one male adult tiger shark displayed year-round residency in the Chesterfields with two females tagged in the Chesterfields and detected on the Great Barrier Reef, Australia, after 591 and 842 days respectively. In coastal barrier reefs, tiger sharks were transient at acoustic arrays and each individual demonstrated a unique pattern of occurrence. From 2009 to 2013, fourteen sharks with satellite and acoustic tags undertook wide-ranging movements up to 1114 km across the Coral Sea with eight detected back on acoustic arrays up to 405 days after being tagged. Tiger sharks dove 1136 m and utilised three-dimensional activity spaces averaged at 2360 km³. The Chesterfield Islands appear to be important habitat for sub-adults and adult male tiger sharks. Management strategies need to consider the wide-ranging movements of large (sub-adult and adult) male and female tiger sharks at the individual level, whereas fidelity to specific coastal reefs may be consistent across groups of individuals. Coastal barrier reef MPAs, however, only afford brief protection for large tiger sharks, therefore determining the importance of other oceanic Coral Sea reefs should be a priority for future research.     

Fortuitous Encounters between Seagliders and Adult Female Northern Fur Seals (Callorhinus ursinus) off the Washington (USA) Coast: Upper Ocean Variability and Links to Top Predator Behavior

Behavioral responses by top marine predators to oceanographic features such as eddies, river plumes, storms, and coastal topography suggest that biophysical interactions in these zones affect predators'' prey, foraging behaviors, and potentially fitness. However, examining these pathways is challenged by the obstacles inherent in obtaining simultaneous observations of surface and subsurface environmental fields and predator behavior. In this study, migratory movements and, in some cases, diving behavior of 40 adult female northern fur seals (NFS; Callorhinus ursinus) were quantified across their range and compared to remotely-sensed environmental data in the Gulf of Alaska and California Current ecosystems, with a particular focus off the coast of Washington State (USA) – a known foraging ground for adult female NFS and where autonomous glider sampling allowed opportunistic comparison of seal behavior to subsurface biophysical measurements. The results show that in these ecosystems, adult female habitat utilization was concentrated near prominent coastal topographic, riverine, or inlet features and within 200 km of the continental shelf break. Seal dive depths, in most ecosystems, were moderated by surface light level (solar or lunar), mirroring known behaviors of diel vertically-migrating prey. However, seal dives differed in the California Current ecosystem due to a shift to more daytime diving concentrated at or below the surface mixed layer base. Seal movement models indicate behavioral responses to season, ecosystem, and surface wind speeds; individuals also responded to mesoscale eddies, jets, and the Columbia River plume. Foraging within small scale surface features is consistent with utilization of the inner coastal transition zone and habitats near coastal capes, which are known eddy and filament generation sites. These results contribute to our knowledge of NFS migratory patterns by demonstrating surface and subsurface behavioral responses to a spatially and temporally dynamic ocean environment, thus reflecting its influence on associated NFS prey species.     

The geological history of deep-sea colonization by echinoids: roles of surface productivity and deep-water ventilation

The origins and geological history of the modern fauna of deep-sea echinoids is explored using a combination of palaeontological and molecular data. We demonstrate that, whereas generalist omnivores have migrated into the deep sea in low numbers over the past 200 Myr, there was a short time-interval between approximately 75 and 55 Myr when the majority of specialist detritivore clades independently migrated off-shelf. This coincides with a marked increase in seasonality, continental run-off and surface water productivity, and suggests that increasing organic carbon delivery into ocean basins was an important controlling factor. Oceanic anoxic events, by contrast, appear to have played a subsidiary role in controlling deep-sea diversity.     

Vertical Movement Patterns and Ontogenetic Niche Expansion in the Tiger Shark,Galeocerdo cuvier

Sharks are top predators in many marine ecosystems and can impact community dynamics, yet many shark populations are undergoing severe declines primarily due to overfishing. Obtaining species-specific knowledge on shark spatial ecology is important to implement adequate management strategies for the effective conservation of these taxa. This is particularly relevant concerning highly-mobile species that use wide home ranges comprising coastal and oceanic habitats, such as tiger sharks, Galeocerdo cuvier. We deployed satellite tags in 20 juvenile tiger sharks off northeastern Brazil to assess the effect of intrinsic and extrinsic factors on depth and temperature usage. Sharks were tracked for a total of 1184 d and used waters up to 1112 m in depth. The minimum temperature recorded equaled 4°C. All sharks had a clear preference for surface (< 5 m) waters but variability in depth usage was observed as some sharks used mostly shallow (< 60 m) waters whereas others made frequent incursions into greater depths. A diel behavioral shift was detected, with sharks spending considerably more time in surface (< 10 m) waters during the night. Moreover, a clear ontogenetic expansion in the vertical range of tiger shark habitat was observed, with generalized linear models estimating a ~4-fold increase in maximum diving depth from 150- to 300-cm size-classes. The time spent in the upper 5 m of the water column did not vary ontogenetically but shark size was the most important factor explaining the utilization of deeper water layers. Young-of-the-year tiger sharks seem to associate with shallow, neritic habitats but they progressively move into deeper oceanic habitats as they grow larger. Such an early plasticity in habitat use could endow tiger sharks with access to previously unavailable prey, thus contributing to a wider ecological niche.     

Indoor Air Inhalation Risk Assessment for Volatiles Emanating from Light Nonaqueous Phase Liquids

The indoor air inhalation pathway for volatile contaminants in soil and groundwater has received much attention recently. The risk of exposure may be higher when volatile organic compounds (VOCs) reside as constituents of a free product plume below residential or commercial structures than when dissolved in groundwater or adsorbed on soil. A methodology was developed for assessing the potential for vapor phase migration—and associated risk of indoor air inhalation—of volatile constituents from a light nonaqueous phase liquid (LNAPL) plume on top of the water table. The potential risk from inhalation of VOCs in indoor air emanating from a subsurface Jet Fuel 4 (JP-4) plume by hypothetical residential receptors was assessed at a site. Chemicals of concern (COCs) were identified and evaluated using data from the composition of JP-4 mixtures and published chemical, physical, and toxicological data. The method estimates the equilibrium vapor concentrations of JP-4 constituents using Raoult's Law for partial vapor pressure of mixtures based on assumptions about the mixture composition of JP-4. The maximum allowable vapor concentration at the source (immediately above the LNAPL) corresponding to an indoor air target concentration based on acceptable risk levels are calculated using the Johnson and Ettinger model. The model calculates the attenuation factor caused by the migration of the vapor phase VOCs through the soil column above the JP-4 plume and through subsurface foundation slabs. Finally, the maximum allowable soil gas concentrations above the LNAPL for individual constituents were calculated using this methodology and compared to the calculated equilibrium vapor concentrations of each COC to assess the likelihood of potential risk from the indoor air inhalation pathway.     

Zebra stripes and tiger stripes: the spatial frequency distribution of the pattern compared to that of the background is significant in display and crypsis

Some striped animals are camouflaged in their natural environment, whereas others are conspicuous. Mammals are known to have spatial frequency analysers in their visual mechanism, and it is suggested that the spatial characteristics of a striped pattern are different in camouflaged and conspicuous animals. Fourier analysis of the stripes of the zebra shows spatial frequencies in the pattern that are unlikely to be present so strongly in their natural background scene. A similar analysis of the camouflaging stripes of a tiger show that the distribution of spatial frequencies are similar to that in the background scene.     

Penguin heat-retention structures evolved in a greenhouse Earth

Penguins (Sphenisciformes) inhabit some of the most extreme environments on Earth. The 60+ Myr fossil record of penguins spans an interval that witnessed dramatic shifts in Cenozoic ocean temperatures and currents, indicating a long interplay between penguin evolution and environmental change. Perhaps the most celebrated example is the successful Late Cenozoic invasion of glacial environments by crown clade penguins. A major adaptation that allows penguins to forage in cold water is the humeral arterial plexus, a vascular counter-current heat exchanger (CCHE) that limits heat loss through the flipper. Fossil evidence reveals that the humeral plexus arose at least 49 Ma during a 'Greenhouse Earth' interval. The evolution of the CCHE is therefore unrelated to global cooling or development of polar ice sheets, but probably represents an adaptation to foraging in subsurface waters at temperate latitudes. As global climate cooled, the CCHE was key to invasion of thermally more demanding environments associated with Antarctic ice sheets.     

The effect of factor Va on lipid dynamics in mixed phospholipid vesicles as detected by steady-state and time-resolved fluorescence depolarization of diphenylhexatriene

We have monitored the thermotropic behavior of mixed dimyristoylglycerophosphoserine (Myr2GroPSer)/dimyristoylglycerophosphocholine (Myr2GroPCho) and Myr2GroPSer/dipalmitoylglycerophosphocholine (Pam2GroPCho) vesicles in the presence of blood-clotting factor Va, using 1,6-diphenyl-1,3, 5-hexatriene as a lipid probe. The Ca2+-independent interaction of factor Va with these vesicles caused a small increase (1-2 degrees C) in the phase transition temperature, regardless of whether Myr2GroPChe was the lower or higher-melting component of the mixed vesicles. The major effect of factor Va was to increase the polarization of diphenylhexatriene when the mixed vesicles were in the liquid crystalline phase. The protein did not change the anisotropy in the bilayer gel state. The increase in the polarization value above the transition temperature closely correlated with the amount of phospholipid-bound factor Va, as verified by a direct binding technique. In addition, we found that the affinity of factor Va for Myr2GroPSer/Myr2GroPCho and Myr2GroPSer/Pam2GroPCho greatly increased at temperatures above the transition temperatures. Time-dependent fluorescence anisotropy measurements of diphenylhexatriene embedded in vesicles in the liquid crystalline state give fluorescence decay curves which can best be fitted by two exponential functions with two rotational correlation times and a constant term. Vesicles composed of Myr2GroPSer exhibit more ordering than Myr2GroPCho vesicles. However, the order parameter of mixed vesicles composed of 40% Myr2GroPSer and 60% Myr2GroPCho (mol/mol) approached that of Myr2GroPCho. Factor Va dramatically increased the longer rotational correlation time of diphenylhexatriene embedded in mixed vesicles in the liquid crystalline state from 3.7 ns to about 17 ns. The second rank-order parameter increased only slightly, but the calculated steady-state anisotropy increased by twofold. These results indicate that the acidic phospholipid-dependent binding of factor Va to mixed vesicles has an ordering effect on the acyl chains of the acidic phospholipids in the outer layer, but leaves the bulk of the phospholipids, mainly phosphatidylcholine, unaltered. None of the factor-Va-induced alterations in the anisotropy parameters point to the occurrence of lateral phase separation.     

The development of an improved model trap for monitoring Ephestia cautella

Delta, Covered funnel and Uni-traps containing pheromone used for monitoring male Ephestia cautella (Walker) (Lepidoptera: Phycitidae) moths were compared in a wind tunnel in moving and still air. The shape and design of the traps and the form of pheromone plume emitted from them determined the moth's latency time, numbers orientating, alighting on the traps and captured. To improve trap design, the visual responses of the moths to rectangles of different colours and sizes and to brown and white stripes, showed that more moths were attracted to darker coloured 6×50 cm vertical rectangles on a white background and to 7.5 mm brown and white stripes. A cylindrical trap containing pheromone incorporating these features captured 90% and 80% of the moths released in the wind tunnel in moving and still air respectively, compared with 70% and 35% for the best commercial traps.