基于广泛靶向代谢组学分析黑老虎不同部位成分差异

为提高黑老虎(Kadsura coccinea)资源的综合利用率，采用广泛靶向代谢组学技术鉴定并分析了根、茎、叶代谢组分差异及高度富集成分。结果表明，在根、茎和叶中分别鉴定出642、650和619个代谢物，以酚酸、脂质、类黄酮和有机酸为主；叶与根、茎与根的共有成分分别为566和650个，显著差异成分有442和393个，主要为酚酸、类黄酮和脂质，差异代谢物在苯丙烷生物合成、黄酮与黄酮醇生物合成通路中显著富集。代谢物总丰度和次生代谢物丰度均表现为叶>根>茎，叶中酚酸、类黄酮和脂质及茎中酚酸积累量显著高于根，而氨基酸及其衍生物、萜类、木脂素、香豆素、生物碱的丰度在根中显著上调。因此，黑老虎根、茎、叶有大量共有成分，叶和茎中酚酸、叶中类黄酮和脂质高度富集，含有新绿原酸、绿原酸、槲皮素等多个丰度较高且具有重要生物活性化合物，具有较高利用价值。     

黑老虎内生真菌及根际土壤真菌的群落结构与生态功能分析

为探讨黑老虎(Kadsura coccinea)根际土壤和组织内生真菌菌群的组成及其生态功能，该研究采用ITS高通量测序技术对成熟黑老虎(根、茎、叶)内生真菌及根际土壤真菌群落结构、多样性和生态功能进行了分析。结果表明：(1)从12个样品中共获得2 241个可操作分类单元(OTU),涉及10门、41纲、95目、212科、367属，内生真菌(根、茎、叶)和根际土壤真菌OTU数分别为386、536、258、1 435个，其中共有的OTU为18个。在门水平上，黑老虎内生真菌及根际土壤真菌优势群落均为子囊菌门和担子菌门，其中子囊菌门在叶和茎中占比分别高达96.99%和95.37%;在属水平上，黑老虎根际土壤真菌中腐生真菌被孢霉属占比较高(为13.5%),叶和茎等生长旺盛的组织中子囊菌门未分类属和痂囊腔菌属占比较高。(2)α多样性分析结果显示，黑老虎根际土壤真菌群落的丰度和多样性明显高于内生真菌，茎中内生真菌丰度显著高于根和叶，而根、茎和叶组织间内生真菌多样性差异不显著；PCoA分析结果显示，叶和茎的真菌群落结构相似性更高。(3)利用FUNGuild数据库进行的功能预测分析结果显示，黑老虎根际土...     

杂交兰及其花艺突变体中类黄酮成分差异的代谢-转录组联合分析

为探索杂交兰花艺突变体变异的分子机理,该研究以杂交兰‘玉凤’及其花艺突变体‘双艺金龙’为材料,利用靶向代谢组学和转录组学鉴定两者中类黄酮化合物含量差异及其相关通路上的差异表达基因。结果表明：(1)代谢组分析发现,杂交兰‘玉凤’和‘双艺金龙’花瓣中共检测到271种类黄酮代谢物,其中黄酮醇类和黄酮类代谢物的相对含量约占总类黄酮的30%～50%;共检测到38个差异代谢物(15个上调,23个下调);‘玉凤’中差异最高的代谢物二氢山奈酚-7-O-葡萄糖苷(黄酮醇类)含量是‘双艺金龙’的124 444倍,‘双艺金龙’中差异最高的代谢物3,5,7,3′,4′-五羟基-5′-异戊二烯基黄酮(黄酮醇类)含量是‘玉凤’的7 244倍。(2)KEGG分析显示,差异代谢物显著富集在类黄酮、黄酮和黄酮醇生物合成途径。其中,在类黄酮生物合成途径上,根皮苷、黄腐醇、二氢山奈酚、二氢杨梅素和表没食子儿茶素含量升高,柚皮苷和二氢槲皮素含量降低;在黄酮和黄酮醇生物合成途径上,三叶豆苷和槲皮素含量均下降。(3)转录组分析共筛选到563个差异表达基因,与‘玉凤’相比,‘双艺金龙’中有220(39.1%)个基因上调表达,343...     

黄酮类化合物对大豆脂肪氧合酶的抑制作用研究

研究了几种不同黄酮化合物(黄酮醇类化合物、异黄酮类化合物、查尔酮类化合物、二氢黄酮类化合物)对大豆脂肪氧合酶(LOX)的抑制作用,并根据实验结果初步探讨了不同结构黄酮类化合物对大豆脂肪氧合酶抑制作用的结构-活性抑制作用关系.结果表明:黄酮化合物均可对LOX有不同程度的抑制作用,除橙皮苷外,它们的抑制效果均与加入量成正比,黄酮醇类化合物的抑制效果最为明显,它们对LOX的半数抑制浓度(IC50)依次为芦丁>槲皮素>根皮素>大豆黄素>异甘草素>芒柄花素>甘草素,而橙皮苷的最大抑制率为0.47 μg/mL时的45.1%.     

铁皮石斛化学成分及其抗氧化活性研究

采用硫酸-苯酚法、AlCl^₃比色法、酸性染料比色法测定铁皮石斛(Dendrobium officinale)花、叶、茎中多糖、黄酮、生物碱含量，通过DPPH和ABTS清除实验评价铁皮石斛花、叶、茎的水提物和乙醇提取物的体外抗氧化活性。结果表明，铁皮石斛不同部位的多糖含量茎>花>叶，黄酮含量花>叶>茎，生物碱在各个部位分布均较少。其中茎的多糖含量可达23.92%，花中黄酮含量可达1.847%。抗氧化能力评价表明，铁皮石斛花水提物、茎醇提物、花醇提物的DPPH自由基清除能力相对较好，半效应浓度(EC₅₀)分别为410.4 μg·mL^-1、454.1 μg·mL^-1、573.2 μg·mL^-1；铁皮石斛茎醇提物、花醇提物、花水提物ABTS自由基清除能力相对较好，半效应浓度(EC₅₀)分别为61.1 μg·mL^-1、62.2 μg·mL^-1、103.0 μg·mL^-1。铁皮石斛花的提取物抗氧化活性整体优于叶和茎，醇提物抗氧化能力优于水提物。     

狭叶柴胡营养器官中柴胡皂苷和黄酮类化合物的积累部位及含量比较

采用植物解剖学、组织化学定位和紫外分光光度计分析方法,对狭叶柴胡各营养器官(根、茎、叶)的结构特征、营养器官中柴胡皂苷和黄酮类化合物的积累部位及其含量进行比较研究。结果表明:(1)狭叶柴胡根由周皮、中柱鞘薄壁组织和次生维管组织组成,茎由表皮、皮层和维管柱组成,叶为等面叶结构,其营养器官的结构均表现出对旱生环境的适应性。(2)组织化学定位显示,柴胡皂苷在狭叶柴胡根中主要分布在维管形成层和次生韧皮部及次生木质部靠近维管形成层的木薄壁细胞中,在茎中主要分布在表皮、皮层、维管形成层及韧皮薄壁细胞中,在叶中主要分布于表皮和叶肉中;狭叶柴胡的黄酮类化合物在茎中主要分布于表皮、棱角处的厚角组织及部分皮层细胞中,在叶中主要分布于表皮和位于叶缘及下表皮内的厚角组织中,在根内分布很少。(3)定量分析表明,柴胡总皂苷在狭叶柴胡根、茎、叶中的含量分别为2.635%、1.045%和0.981%;而黄酮类化合物在根、茎、叶中的含量分别为0.032%、1.212%和2.259%;定量分析结果与组织化学实验结果相符。研究表明,柴胡总皂苷在狭叶柴胡的根中含量最高,支持《中国药典》以根入药的结论;而且狭叶柴胡叶中的黄酮类化合物含量较高,建议对狭叶柴胡的叶进行综合开发利用。     

基于转录组和代谢组分析马齿苋根茎叶中类黄酮代谢

为获取马齿苋(Portulaca oleracea)类黄酮相关成分及其合成酶基因信息,该实验以马齿苋根、茎和叶为材料,进行代谢组学和转录组学联合分析,并从中选取6个差异表达基因进行qRT-PCR验证分析.结果显示:(1)代谢组分析发现,在马齿苋根、茎和叶中共获得32个类黄酮相关化合物,包括3个异黄酮、8个黄酮醇、11个...     

遮阴对柠檬香茅类黄酮及其合成酶基因差异表达研究

为了解柠檬香茅(Cymbopogon citratu)中类黄酮及其合成酶基因信息,以阳光直射及遮阴环境下生长的柠檬香茅嫩叶为材料,进行代谢组、转录组结合qRT-PCR验证分析。结果表明,柠檬香茅中含有11类共69种黄酮化合物,其中芦丁、去甲基托罗沙黄酮、紫云英苷及葡萄糖醇等类黄酮化合物在遮阴环境下相对含量显著降低;类黄酮生物合成涉及10类酶54个基因,其中类黄酮3''羟化酶(c99177.1)等4个酶基因在遮阴环境下相对表达量显著降低,而异黄酮合成酶(c51975.0)等6个酶基因相对表达量正好相反;其中5个类黄酮合成酶基因在光照及遮阴柠檬香茅中的上下调表达趋势与转录组测序结果中FPKM值变化一致,而二者检测结果中差异表达倍数存在差异。遮阴使柠檬香茅中大多黄酮类化合物相对含量降低,而其合成酶基因上下调表达趋势规律不明显。     

基于HS-SPME-GC-MS的襄荷不同部位挥发性成分分析

探讨襄荷不同部位的挥发性成分差异,以便从襄荷植株提取天然香料成分。本研究采用顶空固相微萃取法结合气相色谱-质谱联用技术(HS-SPME-GC-MS)测定襄荷不同部位(根、茎、叶、花苞)中的挥发性成分。结果表明：从襄荷四个部位中共鉴定了197种化合物,其中根92种,茎67种,叶64种,花苞96种。烯烃类和醇类化合物是各部位中的主要挥发性化合物,而桧烯(sabinene)为根和花苞中含量最高的化合物,约占13%,但在叶中的含量只有1.98%。β-蒎烯(β-pinene)为茎和叶中含量最高的化合物,在叶中的含量占到53.46%。此外,α-蒎烯(α-pinene)、隐品酮(cryptone)、α-松油醇(α-terpineol)等化合物在襄荷各部位挥发性成分中的占比也较高。襄荷不同部位中均有其特殊的挥发性成分,共有的挥发性成分为23种。     

荷花花粉的类黄酮组成

利用超高效液相色谱质谱联用(I-Class UPLC/Xevo TQ MS)技术, 对50个品种荷花干燥花粉中的类黄酮代谢产物进行了分离及结构鉴定。结果表明, 在荷花(Nelumbo nucifera)花粉中检测到了13种黄酮醇和2种黄酮, 这15种类黄酮化合物均为首次从荷花花粉中检出, 其中槲皮素3-O-葡萄糖醛酸苷(quercetin 3-O-glucuronide)、槲皮素3-O-新橙皮糖苷(quercetin 3-O-rhamnopyranosyl-(1→2)-glucopyranoside)以及槲皮素3-O-阿拉伯糖-(1→2)-半乳糖苷(quercetin 3-O-arabinopy- ranosyl-(1→2)- galactopyranoside)含量较高, 且在所有品种中均有检出。不同品种花粉中检测到的类黄酮总含量(TF)差异较大, 绯云千叶类黄酮总含量最高, 为281.08 mg∙100 g^-1; 仙女散花最低, 仅为82.64 mg∙100 g^-1。通过聚类分析, 将50个品种聚为4组, B组类黄酮化合物种类最多, 而且该组总类黄酮含量最高, 其中绯云千叶、伯里小姐和蜀红莲的干燥花粉中总类黄酮含量均超过200 mg∙100 g^-1, 可推荐为采集荷花花粉用的优良品种。     

栽培与野生化血丹不同部位中两种化学成分含量分析

为探讨并分析栽培与野生化血丹植株中不同部位中两种化学成分的含量差异,该研究采用超声法提取、高效液相色谱法(HPLC)测定栽培与野生化血丹根、茎、叶、花、混合样等部位中桃叶珊瑚苷和梓醇的含量,并进行比较。结果表明:(1)桃叶珊瑚苷在栽培与野生化血丹植株内均有分布,含量均以根中最高,其在栽培与野生化血丹植株内的含量表现分别为根叶混合样茎花、根混合样茎花叶,栽培化血丹不同部位中桃叶珊瑚苷的含量均高于野生化血丹。(2)梓醇在栽培化血丹的茎中未检出,在栽培与野生化血丹其他部位均有分布,含量均以叶中最高,其在栽培与野生化血丹植株内的含量分别表现为叶花混合样根、叶混合样茎花根,野生化血丹不同部位中梓醇的含量均高于栽培化血丹。(3)桃叶珊瑚苷和梓醇在栽培和野生化血丹植株不同部位中的含量均存在显著差异(P0.05),栽培与野生同一部位间总体上无显著差异,为该濒危药用植物资源药用部位选择和合理开发利用提供实验参考。     

不同生境黑老虎根际和内生真菌多样性分析

为探究不同生长条件下黑老虎根际和根部内生真菌群落组成和多样性及其与土壤环境因子的相关性,该文应用Illumina高通量测序方法对贵州3个不同生境下黑老虎根际和根部内生真菌进行了研究。结果表明:(1)3种生境下,根际土壤真菌OTU数量(3 867)远多于根部内生真菌(801),其中根际土壤真菌共有的OTU为72个,共注释到5个门、49个属,大多为子囊菌门; 属水平上被孢霉属、外瓶柄霉属、 柱孢属占比较高; 根部内生真菌共有的OTU为14个,共注释到2个门、11个属,子囊菌门(13个,占比92.9%)占绝对优势,属水平上被孢霉属、外瓶柄霉属、 柱孢属和丛赤壳属占比最高; 所有样本中,共有的OTU仅为6个,注释到2个门、5个属,子囊菌门(5个,占比83.3%)为优势门; 在属水平上,占比最高的为外瓶柄霉属(2个,33.3%),其余分别为被孢霉属、柱孢属和丛赤壳属 。Alpha多样性分析表明,根际土壤的真菌群落多样性和丰富度均显著高于根部内生真菌,而野生生境的真菌多样性高于栽培生境。(2)在门水平上,3个生境下主要内生真菌类群均为子囊菌门(Ascomycota)和担子菌门(Basidiomycota),占总菌群的88.28%; 在属水平上,不同生境条件下,根际和根部内生真菌群落结构差异明显; 栽培生境下,根部内生真菌菌群具有一定的偏好性,而野生生境下,根部内生真菌菌群均匀度更高; FUNGuild真菌群落功能预测显示,栽培生境下的病理-腐生营养型(pathotroph-saprotroph)在根部内生真菌中占比较高,而野生生境下的腐生营养型(saprotroph)及共生营养型(symbiotroph)占比较高。(3)土壤环境因子对根部内生真菌和根际真菌的影响方式不同,其中土壤总钾(TK)和土壤总磷(TP)与黑老虎根部内生真菌香农指数和辛普森指数显著正相关,而土壤有机质(SOM)、总氮(TN)和速效氮(AN)与黑老虎根际土壤真菌Ace指数和Chao1指数显著正相关。综上表明,土壤有机质、总氮、速效氮是影响黑老虎根际土壤真菌群落的主要土壤环境因子。     

Indirect regeneration of Withania somnifera and comparative analysis of withanolides in in vitro and greenhouse grown plants

The present study reports an efficient protocol for indirect shoot organogenesis and plantlets regeneration of Withania somnifera (L.) Dunal. Leaf explants were cultured on Murashige and Skoog (MS) medium supplemented with different concentrations and combinations of 6-benzylaminopurine (BAP) and indole-3-acetic acid (IAA). The highest callus induction rate (89.5 %) and shoot regeneration rate (92 %) were obtained when 2 mg dm⁻³ BAP was combined with 0.5 mg dm⁻³ IAA. Three major withanolides (withaferine A, 12-deoxywithastramonolide and withanolide A) were investigated in different plant organs from in vitro and greenhouse grown plants. Leaves contained higher contents of withanolides and phenolics than roots or stems, whereas roots contained the highest contents of flavonoids and polysacharides. In vitro grown plants contained greater contents of phenolics, flavonoids and polysaccharides while lower contents of withanolides than greenhouse grown plants.     

Inoculation of Vicia sativa subsp. nigra roots with Rhizobium leguminosarum biovar viciae results in release of nod gene activating flavanones and chalcones

Flavonoids released by roots of Vicia sativa subsp. nigra (V. sativa) activate nodulation genes of the homologous bacterium Rhizobium leguminosarum biovar viciae (R. l. viciae). Inoculation of V. sativa roots with infective R. l. viciae bacteria largely increases the nod gene-inducing ability of V. sativa root exudate (A.A.N. van Brussel et al., J Bact 172: 5394–5401). The present study showed that, in contrast to sterile roots and roots inoculated with R. l. viciae cured of its Sym plasmid, roots inoculated with R. l. viciae harboring its Sym plasmid released additional nod gene-inducing flavonoids. Using ¹H-NMR, the structures of the major inducers released by inoculated roots, 6 flavanones and 2 chalcones, were elucidated. Roots extracts of (un)inoculated V. sativa contain 4 major non-inducing, most likely glycosylated, flavonoids. Therefore, the released flavonoids may either derive from the root flavonoids or inoculation with R. l. viciae activates de novo flavonoid biosynthesis.     

Nitrogen mineralization ofSesbania sesban used as green manure for lowland rice in Sri Lanka

Sesbania sesban was evaluated as green manure crop for lowland rice in the Dry Zone of Sri Lanka. The legume was grown during a fallow period before lowland rice (Oryza sativa) and ploughed under just before transplanting. Weight loss and nitrogen content in litterbags containing leaves, stems and roots of the legume were monitored. Comparisons were made between rice yields from 20 m² plots after green manuring in combination with different nitrogen fertilizer levels (0, 2.4, 4.8 and 7.2 gm⁻²) and nitrogen fertilizer (9.6 gm⁻²) alone. Above-ground biomass ofS. sesban was 440 gm⁻² (dry wt) when ploughed under after 84 days growth. N-content in leaves, stems and roots was 3.76%, 0.41% and 0.73%, respectively. This gave a N-input fromS. sesban of 9.2 gm⁻² (8.3 g from above-ground parts and 0.9 g from roots). The corresponding K and P inputs were 7.3 and 0.6 gm⁻² respectively. The nitrogen rich leaves, which contained 88% of the nitrogen in the above-ground parts, decomposed and released its nitrogen much more rapidly than the stems and roots. After only four days the leaves had released 5.3 g Nm⁻² and after 14 days they had released 6.4 g Nm⁻². The highest rice yield (505 gm⁻²) was obtained usingS. sesban and 4.8 gm⁻² of N-fertilizer. The yields with only N-fertilizer or onlyS. sesban were 442 gm⁻² and 396 gm⁻², respectively. Due to the rapid decomposition of the nitrogen rich leaves,S. sesban did not behave as a slow release fertilizer. Thus, it is not necessary to apply nitrogen fertilizers as a basal dose.     

Valepotriates accumulation in callus, suspended cells and untransformed root cultures of Valeriana glechomifolia

Summary Valeriana glechomifolia is an endemic species of southern Brazil, capable of accumulating, in all of its organs, the terpene derivatives known as valepotriates, the presumed sedative components of the roots of pharmaceutically used species of Valeriana. In vitro cultures of the plant were established and the accumulation of acevaltrate, didrovaltrate, and valtrate in callus, cell suspension, and untransformed root cultures was studied. Leaves of in natura plants and roots of micropropagated plantlets were used as the explants for callus induction and root culture establishment, respectively, on Gamborg B5 basal medium supplemented with 2,4-dichlorophenoxyacetic acid (2,4-D) alone or with kinetin (KIN). Culture growth and secondary metabolite yields were enhanced with 2,4-D (4.52μM) and KIN (0.93μM). Maximum valepotriate contents, quantified by HPLC, of acevaltrate (ACE) 2.6mg g⁻¹ DW, valtrate (VAL) 10.2mgg⁻¹ DW, and didrovaltrate (DID) 2.9mg g⁻¹ DW were observed in root cultures after 7–8wk of culture.     

Changes in Peroxidases and Catalase Activity During in vitro Rooting

Enzyme changes in non-rooted (treated with Fe-EDTA) and rooted (treated with Fe-EDDHA) stems of rootstock GF-677 (Prunus amygdalus×P. persica) during adventitious root formation in vitro have been recorded. The first roots appeared approximately after 12 d on the rooting medium. By contrast to non-rooted stems, rooted stems showed a maximum of soluble peroxidase activity on the 9^th day, of ionically bound peroxidase to cell wall on the 6^th and 12^th day and of catalase on the 6^th and the 15^th day. A time course study of changes of soluble peroxidases isoenzymes showed that there was a band visible only in the rooted stems and also a new band appeared three days before the emergence of roots.     

Interactive effects of potassium and sodium on root growth and expression of K/Na transporter genes in rice

Sufficient supply of potassium (K) can alleviate the adverse effects of excess sodium (Na) on plant growth. However, it remains unclear if such a beneficial function is related to regulation of root growth and/or expression of K/Na transporters. Herein we report the responses of a rice cultivar, which was pretreated with normal nutrient solution for 1 month, to three levels of Na (0, 25, and 100 mM) without or with supply of K for 9 days. High Na (100 mM) significantly decreased plant growth, root activity, and total K uptake, and increased biomass ratio of roots to shoots. Short-term removal of K supply (9 days) did not affect root morphology and biomass ratio of roots to shoots, but decreased root activity of seedlings grown in high Na solution. K deficiency increased uptake of Na and transport of K from roots to shoots. Moreover, expression of OsHAK1, a putative K transporter gene, was upregulated by low Na (25 mM) and downregulated by high Na (100 mM) in roots. In leaves, its expression was suppressed by the Na treatments when K supply was maintained. Expression of OsHKT2;1, which encodes a protein that acts mainly as a Na transporter, was downregulated by high Na, but was enhanced by K deficiency both in roots and leaves. Expression of five other putative K/Na transporter or Na⁺/H⁺ genes, OsHKT1;1, OsHKT1;2, OsHKT2;3, OsNHX1, and OsSOS1, was not affected by the treatments. The results suggest that OsHAK1 and OsHKT2;1 were involved in the interactive effects of K and Na on their uptake and distribution in rice. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.