Millennial-scale change in the structure of a Caribbean reef ecosystem and the role of human and natural disturbance

Caribbean coral reefs have transformed into algal-dominated habitats over the past half-century, but the role of specific anthropogenic drivers is unresolved due to the lack of ecosystem-level data predating human disturbance. To better understand the extent and causes of long-term Caribbean reef declines, we produced a continuous 3000-yr record of the ecosystem state of three reefs in Bocas del Toro, Caribbean Panama. From fossils and sediments obtained from reef matrix cores, we tracked changes in reef accretion rates and the taxonomic and functional group composition of fish, coral, urchin, bivalve and benthic foraminifera. This dataset provided a comprehensive picture of reef community and environmental change. At all sites, reefs shifted from systems with greater relative abundance of herbivorous fish, epifaunal suspension feeding bivalves and Diadema urchins to systems with greater relative abundance of micropredator fish, infaunal bivalves and Echinometra urchins. These transitions were initiated a millennium ago at two less-degraded reefs fringing offshore islands and ~250 yr ago at a degraded patch reef near the continental coast. Ecosystem shifts were accompanied by a decline in reef accretion rates, and at the patch reef, a decline in water quality since the 18th century. Within all cores, synchronous increases in infaunal bivalves and declines in herbivorous fish regardless of water quality suggest a loss of hard substrate and increasingly hypoxic sediment conditions related to herbivore loss. While the early timing of ecosystem transitions at the fringing reefs implicates large-scale hydrological change, the more recent timing of change and loss of water quality at the patch reef implicates terrigenous runoff from land-clearing. Our whole-ecosystem reconstruction reveals that reef ecosystem deterioration appears to follow a predictable trajectory whether driven by natural or anthropogenic disturbances and that historical local human activities have quickly unraveled reefs at a scale similar to longer-term natural environmental change.     

A clear human footprint in the coral reefs of the Caribbean

The recent degradation of coral reefs worldwide is increasingly well documented, yet the underlying causes remain debated. In this study, we used a large-scale database on the status of coral reef communities in the Caribbean and analysed it in combination with a comprehensive set of socioeconomic and environmental databases to decouple confounding factors and identify the drivers of change in coral reef communities. Our results indicated that human activities related to agricultural land use, coastal development, overfishing and climate change had created independent and overwhelming responses in fishes, corals and macroalgae. While the effective implementation of marine protected areas (MPAs) increased the biomass of fish populations, coral reef builders and macroalgae followed patterns of change independent of MPAs. However, we also found significant ecological links among all these groups of organisms suggesting that the long-term stability of coral reefs as a whole requires a holistic and regional approach to the control of human-related stressors in addition to the improvement and establishment of new MPAs.     

Opposite latitudinal gradients in projected ocean acidification and bleaching impacts on coral reefs

Coral reefs and the services they provide are seriously threatened by ocean acidification and climate change impacts like coral bleaching. Here, we present updated global projections for these key threats to coral reefs based on ensembles of IPCC AR5 climate models using the new Representative Concentration Pathway (RCP) experiments. For all tropical reef locations, we project absolute and percentage changes in aragonite saturation state (Ωarag) for the period between 2006 and the onset of annual severe bleaching (thermal stress >8 degree heating weeks); a point at which it is difficult to believe reefs can persist as we know them. Severe annual bleaching is projected to start 10–15 years later at high‐latitude reefs than for reefs in low latitudes under RCP8.5. In these 10–15 years, Ωarag keeps declining and thus any benefits for high‐latitude reefs of later onset of annual bleaching may be negated by the effects of acidification. There are no long‐term refugia from the effects of both acidification and bleaching. Of all reef locations, 90% are projected to experience severe bleaching annually by 2055. Furthermore, 5% declines in calcification are projected for all reef locations by 2034 under RCP8.5, assuming a 15% decline in calcification per unit of Ωarag. Drastic emissions cuts, such as those represented by RCP6.0, result in an average year for the onset of annual severe bleaching that is ~20 years later (2062 vs. 2044). However, global emissions are tracking above the current worst‐case scenario devised by the scientific community, as has happened in previous generations of emission scenarios. The projections here for conditions on coral reefs are dire, but provide the most up‐to‐date assessment of what the changing climate and ocean acidification mean for the persistence of coral reefs.     

Seabird nutrient subsidies alter patterns of algal abundance and fish biomass on coral reefs following a bleaching event

Cross‐ecosystem nutrient subsidies play a key role in the structure and dynamics of recipient communities, but human activities are disrupting these links. Because nutrient subsidies may also enhance community stability, the effects of losing these inputs may be exacerbated in the face of increasing climate‐related disturbances. Nutrients from seabirds nesting on oceanic islands enhance the productivity and functioning of adjacent coral reefs, but it is unknown whether these subsidies affect the response of coral reefs to mass bleaching events or whether the benefits of these nutrients persist following bleaching. To answer these questions, we surveyed benthic organisms and fishes around islands with seabirds and nearby islands without seabirds due to the presence of invasive rats. Surveys were conducted in the Chagos Archipelago, Indian Ocean, immediately before the 2015–2016 mass bleaching event and, in 2018, two years following the bleaching event. Regardless of the presence of seabirds, relative coral cover declined by 32%. However, there was a post‐bleaching shift in benthic community structure around islands with seabirds, which did not occur around islands with invasive rats, characterized by increases in two types of calcareous algae (crustose coralline algae [CCA] and Halimeda spp.). All feeding groups of fishes were positively affected by seabirds, but only herbivores and piscivores were unaffected by the bleaching event and sustained the greatest difference in biomass between islands with seabirds versus those with invasive rats. By contrast, corallivores and planktivores, both of which are coral‐dependent, experienced the greatest losses following bleaching. Even though seabird nutrients did not enhance community‐wide resistance to bleaching, they may still promote recovery of these reefs through their positive influence on CCA and herbivorous fishes. More broadly, the maintenance of nutrient subsidies, via strategies including eradication of invasive predators, may be important in shaping the response of ecological communities to global climate change.     

Effect of historical land‐use and climate change on tree‐climate relationships in the upper Midwestern United States

Contemporary forest inventory data are widely used to understand environmental controls on tree species distributions and to construct models to project forest responses to climate change, but the stability and representativeness of contemporary tree‐climate relationships are poorly understood. We show that tree‐climate relationships for 15 tree genera in the upper Midwestern US have significantly altered over the last two centuries due to historical land‐use and climate change. Realised niches have shifted towards higher minimum temperatures and higher rainfall. A new attribution method implicates both historical climate change and land‐use in these shifts, with the relative importance varying among genera and climate variables. Most climate/land‐use interactions are compounding, in which historical land‐use reinforces shifts in species‐climate relationships toward wetter distributions, or confounding, in which land‐use complicates shifts towards warmer distributions. Compounding interactions imply that contemporary‐based models of species distributions may underestimate species resilience to climate change.     

Global environmental change effects on ecosystems: the importance of land‐use legacies

One of the major challenges in ecology is to predict how multiple global environmental changes will affect future ecosystem patterns (e.g. plant community composition) and processes (e.g. nutrient cycling). Here, we highlight arguments for the necessary inclusion of land‐use legacies in this endeavour. Alterations in resources and conditions engendered by previous land use, together with influences on plant community processes such as dispersal, selection, drift and speciation, have steered communities and ecosystem functions onto trajectories of change. These trajectories may be modulated by contemporary environmental changes such as climate warming and nitrogen deposition. We performed a literature review which suggests that these potential interactions have rarely been investigated. This crucial oversight is potentially due to an assumption that knowledge of the contemporary state allows accurate projection into the future. Lessons from other complex dynamic systems, and the recent recognition of the importance of previous conditions in explaining contemporary and future ecosystem properties, demand the testing of this assumption. Vegetation resurvey databases across gradients of land use and environmental change, complemented by rigorous experiments, offer a means to test for interactions between land‐use legacies and multiple environmental changes. Implementing these tests in the context of a trait‐based framework will allow biologists to synthesize compositional and functional ecosystem responses. This will further our understanding of the importance of land‐use legacies in determining future ecosystem properties, and soundly inform conservation and restoration management actions.     

基于遥感数据的植被碳水利用效率时空变化和归因分析

植被碳水利用效率是表征生态系统碳水循环的重要指标。采用MODIS数据,利用Google Earth Engine平台计算植被碳利用效率(Carbon Use Efficiency, CUE)与水利用效率(Water Use Efficiency, WUE)。采用趋势分析、变异系数、R/S分析及偏相关分析等方法,对2000—2020年黄河流域植被CUE与WUE的时空动态进行分析,并探究水热条件对碳水利用效率的影响。结果表明：(1)2000—2020年黄河流域植被碳水利用效率年均值分别为0.61和0.68 gC m^-2 mm^-1;研究时限内,植被CUE呈波动下降趋势,而WUE呈波动上升趋势。(2)空间上,植被CUE呈西高东低分布,WUE相反。不同土地覆被类型的CUE表现为草地>农田>灌丛>森林;WUE表现为：农田>森林>草地>灌丛。(3)总体上,黄河流域植被CUE与温度呈负相关,与降水呈正相关;黄河流域北部植被WUE与温度和降水均呈正相关关系,黄河流域西南部植被WUE与降水负相关;(4)不同土地利用类型中,草地...     

Effects of 21st‐century climate,land use,and disturbances on ecosystem carbon balance in California

Terrestrial ecosystems are an important sink for atmospheric carbon dioxide (CO₂), sequestering ~30% of annual anthropogenic emissions and slowing the rise of atmospheric CO₂. However, the future direction and magnitude of the land sink is highly uncertain. We examined how historical and projected changes in climate, land use, and ecosystem disturbances affect the carbon balance of terrestrial ecosystems in California over the period 2001–2100. We modeled 32 unique scenarios, spanning 4 land use and 2 radiative forcing scenarios as simulated by four global climate models. Between 2001 and 2015, carbon storage in California's terrestrial ecosystems declined by ?188.4 Tg C, with a mean annual flux ranging from a source of ?89.8 Tg C/year to a sink of 60.1 Tg C/year. The large variability in the magnitude of the state's carbon source/sink was primarily attributable to interannual variability in weather and climate, which affected the rate of carbon uptake in vegetation and the rate of ecosystem respiration. Under nearly all future scenarios, carbon storage in terrestrial ecosystems was projected to decline, with an average loss of ?9.4% (?432.3 Tg C) by the year 2100 from current stocks. However, uncertainty in the magnitude of carbon loss was high, with individual scenario projections ranging from ?916.2 to 121.2 Tg C and was largely driven by differences in future climate conditions projected by climate models. Moving from a high to a low radiative forcing scenario reduced net ecosystem carbon loss by 21% and when combined with reductions in land‐use change (i.e., moving from a high to a low land‐use scenario), net carbon losses were reduced by 55% on average. However, reconciling large uncertainties associated with the effect of increasing atmospheric CO₂ is needed to better constrain models used to establish baseline conditions from which ecosystem‐based climate mitigation strategies can be evaluated.     

基于区域城市化LUCC的人类生态过程定量研究——以上海市区典型城市化样带为例

借鉴流域研究的范例,根据上海市1987年、1995年和2003年3期Landsat5 TM遥感影像记录的土地利用／覆被数据和有关的社会经济统计数据,运用Rs和GIS技术在上海市中心西南城市边缘建立典型城市化样带。采用生态足迹法分析该样带内人类的生态供给与需求;提出一城市化区域人类生态过程的新研究方法,得出城市化过程中区域的人类生态质量指数与波动指数,并根据模型计算出的指数值,对样带区域总体及其中城乡区域在城市化中的人类生态状况进行了动态分析,以尝试对区域城市化中人类生态过程进行定量化研究。     

Environmental Impact Assessment of Wood Use in Japan through 2050 Using Material Flow Analysis and Life Cycle Assessment

In this study, we used material flow analysis and life cycle assessment to quantify the environmental impacts and impact reductions related to wood consumption in Japan from 1970 to 2013. We then conducted future projections of the impacts and reductions until 2050 based on multiple future scenarios of domestic forestry, wood, and energy use. An impact assessment method involving characterization, damage assessment, and integration with a monetary unit was used, and the results were expressed in Japanese yen (JPY). We found that environmental impacts from paper consumption, such as climate change and urban air pollution, were significant and accounted for 56% to 83% of the total environmental impacts between 1970 and 2013. Therefore, reductions of greenhouse gas, nitrogen oxide, and sulfur oxide emissions from paper production would be an effective measure to reduce the overall environmental impacts. An increase in wood use for building construction, civil engineering, furniture materials, and energy production could lead to reductions of environmental impacts (via carbon storage, material substitution, and fuel substitution) amounting to 357 billion JPY in 2050, which is equivalent to 168% of the 2013 levels. Particularly, substitution of nonwooden materials, such as cement, concrete, and steel, with wood products in building construction could significantly contribute to impact reductions. Although an increase of wood consumption could reduce environmental impacts, such as climate change, resource consumption, and urban air pollution, increased wood consumption would also be associated with land‐use impacts. Therefore, minimizing land transformations from forest to barren land will be important.     

Intertwined effects of climate and land use change on environmental dynamics and carbon accumulation in a mangrove‐fringed coastal lagoon in Java,Indonesia

The identification and quantification of natural carbon (C) sinks is critical to global climate change mitigation efforts. Tropical coastal wetlands are considered important in this context, yet knowledge of their dynamics and quantitative data are still scarce. In order to quantify the C accumulation rate and understand how it is influenced by land use and climate change, a palaeoecological study was conducted in the mangrove‐fringed Segara Anakan Lagoon (SAL) in Java, Indonesia. A sediment core was age‐dated and analyzed for its pollen and spore, elemental and biogeochemical compositions. The results indicate that environmental dynamics in the SAL and its C accumulation over the past 400 years were controlled mainly by climate oscillations and anthropogenic activities. The interaction of these two factors changed the lagoon's sediment supply and salinity, which consequently altered the organic matter composition and deposition in the lagoon. Four phases with varying climates were identified. While autochthonous mangrove C was a significant contributor to carbon accumulation in SAL sediments throughout all four phases, varying admixtures of terrestrial C from the hinterland also contributed, with natural mixed forest C predominating in the early phases and agriculture soil C predominating in the later phases. In this context, climate‐related precipitation changes are an overarching control, as surface water transport through rivers serves as the “delivery agent” for the outcomes of the anthropogenic impact in the catchment area into the lagoon. Amongst mangrove‐dominated ecosystems globally, the SAL is one of the most effective C sinks due to high mangrove carbon input in combination with a high allochthonous carbon input from anthropogenically enhanced sediment from the hinterland and increased preservation. Given the substantial C sequestration capacity of the SAL and other mangrove‐fringed coastal lagoons, conservation and restoration of these ecosystems is vitally important for climate change mitigation.     

Vegetation state changes in the course of shrub encroachment in an African savanna since about 1850 CE and their potential drivers

1. Shrub encroachment has far‐reaching ecological and economic consequences in many ecosystems worldwide. Yet, compositional changes associated with shrub encroachment are often overlooked despite having important effects on ecosystem functioning.
2. We document the compositional change and potential drivers for a northern Namibian Combretum woodland transitioning into a Terminalia shrubland. We use a multiproxy record (pollen, sedimentary ancient DNA, biomarkers, compound‐specific carbon (δ¹³C) and deuterium (δD) isotopes, bulk carbon isotopes (δ¹³Corg), grain size, geochemical properties) from Lake Otjikoto at high taxonomical and temporal resolution.
3. We provide evidence that state changes in semiarid environments may occur on a scale of one century and that transitions between stable states can span around 80 years and are characterized by a unique vegetation composition. We demonstrate that the current grass/woody ratio is exceptional for the last 170 years, as supported by n‐alkane distributions and the δ¹³C and δ¹³Corg records. Comparing vegetation records to environmental proxy data and census data, we infer a complex network of global and local drivers of vegetation change. While our δD record suggests physiological adaptations of woody species to higher atmospheric pCO₂ concentration and drought, our vegetation records reflect the impact of broad‐scale logging for the mining industry, and the macrocharcoal record suggests a decrease in fire activity associated with the intensification of farming. Impact of selective grazing is reflected by changes in abundance and taxonomical composition of grasses and by an increase of nonpalatable and trampling‐resistant taxa. In addition, grain‐size and spore records suggest changes in the erodibility of soils because of reduced grass cover.
4. Synthesis. We conclude that transitions to an encroached savanna state are supported by gradual environmental changes induced by management strategies, which affected the resilience of savanna ecosystems. In addition, feedback mechanisms that reflect the interplay between management legacies and climate change maintain the encroached state.

     

Relative importance of long‐term changes in climate and land‐use on the phenology and abundance of legume crop specialist and generalist aphids

Abstract Insect populations are prone to respond to global changes through shifts in phenology, distribution and abundance. However, global changes cover several factors such as climate and land-use, the relative importance of these being largely unknown. Here, we aim at disentangling the effects of climate, land-use, and geographical drivers on aphid abundance and phenology in France, at a regional scale and over the last 40 years. We used aerial data obtained from suction traps between 1978 and 2015 on five aphid species varying in their degree of specialization to legumes, along with climate, legume crop area and geographical data. Effects of environmental and geographical variables on aphid annual abundance and spring migration dates were analyzed using generalized linear mixed models. We found that within the last four decades, aphids have advanced their spring migration by a month, mostly due to the increase in temperature early in the year, and their abundance decreased by half on average, presumably in response to a combination of factors. The influence of legume crop area decreased with the degree of specialization of the aphid species to such crops. The effect of geographical variation was high even when controlling for environmental variables, suggesting that many other spatially structured processes act on aphid population characteristics. Multifactorial analyses helped to partition the effects of different global change drivers. Climate and land-use changes have strong effects on aphid populations, with important implications for future agriculture. Additionally, trait-based response variation could have major consequences at the community scale.     

A socio‐ecological model for predicting impacts of land‐use and climate change on regional plant diversity in the Austrian Alps

Climate and land‐use change jointly affect the future of biodiversity. Yet, biodiversity scenarios have so far concentrated on climatic effects because forecasts of land use are rarely available at appropriate spatial and thematic scales. Agent‐based models (ABMs) represent a potentially powerful but little explored tool for establishing thematically and spatially fine‐grained land‐use scenarios. Here, we use an ABM parameterized for 1,329 agents, mostly farmers, in a Central European model region, and simulate the changes to land‐use patterns resulting from their response to three scenarios of changing socio‐economic conditions and three scenarios of climate change until the mid of the century. Subsequently, we use species distribution models to, first, analyse relationships between the realized niches of 832 plant species and climatic gradients or land‐use types, respectively, and, second, to project consequent changes in potential regional ranges of these species as triggered by changes in both the altered land‐use patterns and the changing climate. We find that both drivers determine the realized niches of the studied plants, with land use having a stronger effect than any single climatic variable in the model. Nevertheless, the plants' future distributions appear much more responsive to climate than to land‐use changes because alternative future socio‐economic backgrounds have only modest impact on land‐use decisions in the model region. However, relative effects of climate and land‐use changes on biodiversity may differ drastically in other regions, especially where landscapes are still dominated by natural or semi‐natural habitat. We conclude that agent‐based modelling of land use is able to provide scenarios at scales relevant to individual species distribution and suggest that coupling ABMs with models of species' range change should be intensified to provide more realistic biodiversity forecasts.     

Potential impacts of future land use and climate change on the Red List status of the Proteaceae in the Cape Floristic Region, South Africa

Using spatial predictions of future threats to biodiversity, we assessed for the first time the relative potential impacts of future land use and climate change on the threat status of plant species. We thus estimated how many taxa could be affected by future threats that are usually not included in current IUCN Red List assessments. Here, we computed the Red List status including future threats of 227 Proteaceae taxa endemic to the Cape Floristic Region, South Africa, and compared this with their Red List status excluding future threats. We developed eight different land use and climate change scenarios for the year 2020, providing a range of best‐ to worst‐case scenarios. Four scenarios include only the effects of future land use change, while the other four also include the impacts of projected anthropogenic climate change (HadCM2 IS92a GGa), using niche‐based models. Up to a third of the 227 Proteaceae taxa are uplisted (become more threatened) by up to three threat categories if future threats as predicted for 2020 are included, and the proportion of threatened Proteaceae taxa rises on average by 9% (range 2–16%), depending on the scenario. With increasing severity of the scenarios, the proportion of Critically Endangered taxa increases from about 1% to 7% and almost 2% of the 227 Proteaceae taxa become Extinct because of climate change. Overall, climate change has the most severe effects on the Proteaceae, but land use change also severely affects some taxa. Most of the threatened taxa occur in low‐lying coastal areas, but the proportion of threatened taxa changes considerably in inland mountain areas if future threats are included. Our approach gives important insights into how, where and when future threats could affect species persistence and can in a sense be seen as a test of the value of planned interventions for conservation.     

Water use and yield of bioenergy poplar in future climates: modelling the interactive effects of elevated atmospheric CO2 and climate on productivity and water use

Vegetation exerts large control on global biogeochemical cycles through the processes of photosynthesis and transpiration that exchange CO₂ and water between the land and the atmosphere. Increasing atmospheric CO₂ concentrations exert direct effects on vegetation through enhanced photosynthesis and reduced stomatal conductance, and indirect effects through changes in climatic variables that drive these processes. How these direct and indirect CO₂ impacts interact with each other to affect plant productivity and water use has not been explicitly analysed and remains unclear, yet is important to fully understand the response of the global carbon cycle to future climate change. Here, we use a set of factorial modelling experiments to quantify the direct and indirect impacts of atmospheric CO₂ and their interaction on yield and water use in bioenergy short rotation coppice poplar, in addition to quantifying the impact of other environmental drivers such as soil type. We use the JULES land‐surface model forced with a ten‐member ensemble of projected climate change for 2100 with atmospheric CO₂ concentrations representative of the A1B emissions scenario. We show that the simulated response of plant productivity to future climate change was nonadditive in JULES, however this nonadditivity was not apparent for plant transpiration. The responses of both growth and transpiration under all experimental scenarios were highly variable between sites, highlighting the complexity of interactions between direct physiological CO₂ effects and indirect climate effects. As a result, no general pattern explaining the response of bioenergy poplar water use and yield to future climate change could be discerned across sites. This study suggests attempts to infer future climate change impacts on the land biosphere from studies that force with either the direct or indirect CO₂ effects in isolation from each other may lead to incorrect conclusions in terms of both the direction and magnitude of plant response to future climate change.