Plant genetic diversity in the Canary Islands: a conservation perspective

The Canary Islands are an Atlantic volcanic archipelago with a rich flora of ～570 endemic species. The endemics represent ～40% of the native flora of the islands, and ～20% of the endemics are in the E (endangered) category of the International Union for Conservation of Nature. A review of allozyme variation in 69 endemic species belonging to 18 genera and eight families is presented. The average species-level genetic diversity (H(T)) at allozyme loci is 0.186, which is twice as high as the mean reported for endemics of Pacific archipelagos. Possible factors contributing to this higher diversity are discussed, but the reasons remain obscure. An average of 28% of the allozyme diversity within species resides among populations, indicating a high level of interpopulational differentiation. Studies of reproductive biology indicate that many of the endemic species are outcrossers. The high total diversity within species, the relatively high differentiation among populations, and the outcrossing breeding systems have implications for species conservation. Decreased population sizes in outcrossing species would promote biparental inbreeding and increase inbreeding depression. The relatively high proportion of allozyme diversity among populations indicates that the most effective strategy for preserving genetic variation in species is to conserve as many populations as possible. The genetic diversity in many Canary Island endemics is endangered by: (1) overgrazing by introduced animals, such as barbary sheep, goats, mouflons, rabbits, and sheep; (2) interspecific hybridization following habitat disturbance or planting of endemics along roadsides or in public gardens; (3) competition with alien plant species; and (4) decline of population size because of urban development and farming.     

Adaptive management as a tool to improve the conservation of endemic floras: the case of Sicily, Malta and their satellite islands

The presence of endemic species is among the fundamental criteria for characterizing the biodiversity of a territory. Analyzing species richness, extinction level and distribution drivers is an important preliminary step to set conservation priorities and test environmental policies. This study applied the concept of adaptive management to develop strategies for the conservation of endemic floras by considering, as a case study, Sicily, Malta and their neighboring small islands. Adaptive management can be defined as the systematic acquisition and application of reliable information to improve management over time. The development of adaptive conservation strategies aimed preliminary: (1) to quantify endemic plant diversity; (2) to assess the current IUCN knowledge; (3) to analyze the spatial patterns of species distribution in relation to number of colonized habitats, preferential habitats, altitudinal range, and bedrock; (4) to assess whether Natura 2000 network contributed significantly to increase the overlap between endemic distributional areas and protected surface. Strictly Sicilian endemics were 202 taxa amounting to 7.0 % of the whole native flora (c. 2900 taxa). The current picture of extinction risk is still incomplete because over 50 % of endemics were never assessed or assessed with old IUCN criteria. The spatial range size of endemics depended by 40 % on bedrock, and altitudinal and niche breadth. Habitat type did not influence the range size of endemics. The overlap between endemic distributional areas and protected surface increased from 41.3 to 63.3 % with Natura 2000. Adaptive management needs measurable goals to test the progressive improvement of conservation strategies over time, and the reduction in threatened species may be considered as an indicator of successful conservation outcomes. Feedback plays an important role in the periodic revision of biodiversity assessment, distribution modeling, and environmental management, which are fundamental to predict conservation outcomes in the face of extreme uncertainty. In particular, the exhaustive knowledge of the IUCN status is a primary step to implement adaptive measures of conservation, especially as regards endemic floras that are potentially more vulnerable to large-scale or unpredictable and stochastic threats.     

Conservation of oceanic island floras: Present and future global challenges

Current threats to the planet's biodiversity are unprecedented, and they particularly imperil insular floras. In this investigation, we use the threat factors identified by the Millennium Ecosystem Assessment as the main drivers of biodiversity loss on islands to define and rank 13 current, continuing threats to the plant diversity of nine focal archipelagos where volcanic origin (or in the Seychelles a prolonged isolation after a continental origin) has produced a high degree of endemicity and fragility in the face of habitat alteration. We also conduct a global endangerment assessment based on the numbers of insular endemic plants in the endangered (EN) and critically endangered (CR) IUCN categories for 53 island groups with an estimated 9951 endemic plant species, providing a representative sample of the world's insular systems and their floristic richness. Our analyses indicate that isolation does not significantly influence endangerment, but plant endemics from very small islands are more often critically endangered. We estimate that between 3500 and 6800 of the estimated 70,000 insular endemic plant species worldwide might be highly threatened (CR+EN) and between ca. 2000 and 2800 of them in critical danger of extinction (CR). Based on these analyses, and on a worldwide literature review of the biological threat factors considered, we identify challenging questions for conservation research, asking (i) what are the most urgent priorities for the conservation of insular species and floras, and (ii) with the knowledge and assets available, how can we improve the impact of conservation science and practice on the preservation of island biodiversity? Our analysis indicates that the synergistic action of many threat factors can induce major ecological disturbances, leading to multiple extinctions. We review weaknesses and strengths in conservation research and management in the nine focal archipelagos, and highlight the urgent need for conservation scientists to share knowledge and expertise, identify and discuss common challenges, and formulate multi-disciplinary conservation objectives for insular plant endemics worldwide. To our knowledge, this is the most up-to-date and comprehensive survey yet to review the threat factors to native plants on oceanic islands and define priority research questions.     

Genetic structure of the rare and endangered Hieracium wiesbaurianum group (Asteraceae) in Bavaria

The rare and endangered Hieracium wiesbaurianum species group shows a scattered relictual distribution in Bavaria. Recently, a couple of populations were discovered which clearly differ from all other populations. If these must be considered as taxonomically independent units, they would be of crucial conservation interest, because of the sole responsibility that Bavaria has for these worldwide endemics. We therefore analysed the genetic structure of H. wiesbaurianum in a comparative approach. Our analysis comprised 37 populations of 13 taxa of H. wiesbaurianum, H. bifidum and H. laevigatum, including three potentially new taxa. We applied amplified fragment length polymorphism (AFLP) analysis and observed only limited genetic variation within populations and taxa. Nevertheless, each studied individual exhibited a unique genotype. An analysis of molecular variance revealed high levels of genetic variation between taxa, but populations were genetically less different. The clear genetic differentiation between the studied taxa was supported by neighbor‐joining cluster analyses and principal coordinate analyses in which every individual was clearly assigned to its respective taxon. The three potentially new taxa were genetically as well differentiated as the other taxa included in our study. This supports the assumption that they should be treated as taxonomically independent units of high conservation interest. Therefore, the genetic analysis confirmed the morphologically based classification of the studied Hieracium taxa. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 177 , 112–123.     

海洋岛屿生物多样性保育研究进展

海洋岛屿生态系统因具有明显的海域地理隔离而区别于陆地生态系统,被誉为生物地理与进化生态学研究的"天然实验室".陆地或其它邻近岛屿的种源物种迁移到新的岛屿后,经历地理隔离、特征置换或适应辐射等一系列的岛屿进化过程,形成与种源物种具有显著遗传差异的岛屿特有种.岛屿在小面积范围内分化形成大量的特有种,是岛屿生物多样性最为重要的特点之一.但是,岛屿种群由于分布范围局限、生境脆弱且种群规模较小,岛屿种群较陆地种群具有更高的灭绝风险.本文通过对海洋岛屿物种的起源与演化、遗传结构以及岛屿物种的濒危与保护3个热点问题的讨论,阐述岛屿生物多样性的形成机制、濒危肇因以及岛屿生物多样性保育的重要性.     

Low genetic diversity but local genetic differentiation in endemic Minasia (Asteraceae) species from Brazil

Espinhaço Range is a Brazilian chain of mountains, extremely rich in endemic species. Minasia has six species, all perennial herbs endemic to this range. Twenty-two populations were sampled from all Minasia species and assayed for allozyme variation. The species showed low genetic variation, compatible with the expectation for endemics. Genetic identities in Serra do Cipó and Diamantina were high, even between populations of different species. On the other hand M. cabralensis, from Serra do Cabral, was more differentiated from the other species. We also observed a marked genetic differentiation within M. cabralensis. Most strikingly, two close populations of this species showed very different allele frequencies. Our findings highlight the importance of local differentiation in campos rupestres. The observed genetic structure indicates that substantial portions of genetic diversity could be lost with the extinction of only one population, which is especially threatening considering the already low genetic diversity.     

AFLP and ISSR analysis reveals high genetic variation and inter-population differentiation in fragmented populations of the endangered Litsea szemaois (Lauraceae) from Southwest China

Litsea szemaois (Lauraceae) is an endemic and endangered species from the tropical rain forests of Xishuangbanna, southern Yunnan, SW China, but habitat fragmentation, especially exacerbated by rubber planting, has caused a decline in population size of the species. AFLP and ISSR were used to investigate the genetic diversity and population structure of eight populations from across its known distribution. Three AFLP and ten ISSR primer combinations produced a total of 203 and 77 unambiguous and repeatable bands respectively, of which 164 (80.8%) and 67 (87.0%) were polymorphic for the two markers. These two markers showed that Litsea szemaois exhibits comparatively high genetic diversity at species level (heterozygosity (hs) = 0.2109) relative to some other Lauraceae. Most of the genetic variation was partitioned within populations, but genetic differentiation between populations was significant and relatively high (Φ _st = 0.2420, θ^B = 0.1986) compared with other tropical plants. The genetic characteristics of L. szemaois may be related to its outbreeding system, insect pollination and fragmented distribution. Because L. szemaois is dioecious and slow to mature, ex situ conservation across its genetic diversity is unlikely to succeed, although seedlings grow well under cultivation. Thus, in situ conservation is very important for this endangered species, especially as only 133 adult individuals are known in the wild. In particular, the Nabanhe and Mandian populations should be given a high conservation priority due to their higher genetic diversity, larger population size and better field condition, but wider sampling is required across all populations to determine additional areas with significant genetic conservation value.     

Genetic diversity of three endangered species of <Emphasis Type="Italic">Echium</Emphasis> L. (Boraginaceae) endemic to Cape Verde Islands

Echium hypertropicum, E. stenosiphon and E. vulcanorum are the three endemics representative of the genus Echium (Boraginaceae) in Cape Verde archipelago. The aim of this study is to provide a first attempt at estimating genetic diversity among natural populations of these endangered Echium species based on RAPD, so as to provide data available for future appropriate strategies for their conservation. PCO and UPGMA of RAPD analysis suggests a close genetic proximity between the Southern endemic species (E. hypertropicum and E. vulcanorum) and shows that the levels of polymorphism strongly differ between these two Echium species (27 and 29% respectively) and E. stenosiphon (74%), the Northern endemic species. Mantel test also corroborates a close genetic proximity between genetic and geographic data. Population genetic analysis of E. stenosiphon revealed low levels of gene flow between islands (Nm = 0.32) being S. Nicolau the most isolated as evident in PCO. Furthermore the differentiation between groups of individuals belonging to putative subspecies was tested by AMOVA. According to our results there is no genetic basis to consider the two subspecies of E. stenosiphon namely ssp. stenosiphon and ssp. lindbergii. Our results enable us to suggest that E. stenosiphon must be ranked as a Threatened species. Measures aiming at conservation of E. hypertropicum and E. vulcanorum must be implemented at short-term taking into account the small number of existing plants and its low genetic variability.     

Molecular markers reveal no genetic differentiation between Myrica rivas-martinezii and M. faya (Myricaceae)

Background and Aims

Myrica rivas-martinezii is a critically endangered endemic of the laurel forest of the Canary Islands and co-occurs very close to M. faya. Some authors suggest that M. rivas-martinezii and M. faya are two morphs of the same species, so molecular markers were used to estimate the levels and structuring of genetic variation within and among natural populations in order to evaluate genetic relationships between these two congeners.

Methods

Six polymorphic microsatellite (simple sequence repeat, SSR) markers were used to determine the genetic diversity and the genetic relationship between both Myrica species.

Key Results

Most of the natural populations analysed were in Hardy–Weinberg equilibrium for both taxa. Analysis of molecular variance (AMOVA) for both species revealed that most of the genetic variability detected was contained within populations (92·48 and 85·91 % for M. faya and M. rivas-martinezii, respectively), which it is consistent with outcrossing and dioecious plants. Estimates of interpopulation genetic variation, calculated from F_ST and G′_ST, were quite low in the two taxa, and these values did not increase substantially when M. rivas-martinezii and M. faya populations were compared. The UPGMA dendrogram based on Nei''s genetic distance clustered the populations by their island origin, independently of taxon. In fact, the mixture of individuals of both taxa did not appreciably disrupt the intrapopulational genetic cohesion, and only 3·76 % variation existed between species.

Conclusions

All the results obtained using molecular markers indicate clearly that both taxa share the same genetic pool, and they are probably the same taxa. Considering that M. rivas-martinezii is classified as at risk of extinction, there should be a change of focus of the current management actions for the conservation of this putatively endangered Canarian endemic.Key words: Canary Islands, conservation genetics, microsatellites, Myrica rivas-martinezii, Myrica faya, plant conservation     

Narrow endemics to Mediterranean islands: Moderate genetic diversity but narrow climatic niche of the ancient,critically endangered Naufraga (Apiaceae)

Narrow endemics constitute the cornerstone of Mediterranean plant diversity. Naufraga balearica (Apiaceae) is a critically endangered, extremely narrow endemic plant from the western Mediterranean island of Majorca. Because the species belongs to a monotypic genus, N. balearica was hypothesized to be a palaeoendemism. Here we conducted phylogenetic dating, population genetic and climatic niche analyses in order to understand the evolutionary history and conservation perspectives of this flagship species. Phylogenetic dating analysis of nuclear and plastid DNA sequences revealed a late Miocene to early Pliocene divergence between Naufraga and its sister genus Apium, supporting the palaeoendemic status of the former. Amplified fragment length polymorphism (AFLP) markers and plastid DNA sequences of the five Naufraga populations revealed moderate genetic diversity. This diversity is in line with that of other palaeoendemisms from western Mediterranean islands, as revealed by a comparison with 22 other narrow endemic species from this region. Despite the fact that all Naufraga populations are located at a maximum distance of 10 km in a straight line, a strikingly strong population differentiation was found for AFLP markers, which is explained by long-term isolation likely related to short-range pollination and dispersal strategies of the species. While the species is not genetically impoverished, species distribution modelling and microclimatic monitoring revealed that narrow ecological requirements underlie the current extreme rarity of Naufraga and may jeopardize its long-term survival. Our results indicate that a multidisciplinary approach provides powerful tools to develop conservation strategies for evolutionarily singular lineages.     

Survey of the land snail fauna (Gastropoda: Pulmonata) of Mount Kaputar National Park in northern inland New South Wales,Australia, including a description of the listing of Australia's first legally recognised endangered land snail community

Mount Kaputar is an isolated high-elevation mesic refuge on the dry inland western slopes of eastern Australia's Great Dividing Range. A field survey in Mount Kaputar National Park in 2007–2014, and collation of existing information, identified a native land snail fauna of 24 species (seven families), including nine endemic taxa and another two occurring as disjunct populations. Additional species probably remain to be identified. Two introduced species of agriolimacid slugs were also recorded. Information from this study was the basis of the successful listing of an endangered land snail community at Mount Kaputar under state threatened species legislation in 2013; the first legal listing of an endangered land snail community in Australia. The recognition of endangered communities is a useful intermediate scale between the extremes of the single-species and broad-landscape conservation approaches, and has significant potential for multi-species conservation initiatives for terrestrial gastropods. Anthropogenic climate change is the most significant threat to this community, with a 100 m rise in environmental envelope likely to reduce the available area of habitat by over 50%. This community, and, in particular, a bright pink endemic athoracophorid slug, is contributing to raising public awareness of the threat to global biodiversity from anthropogenic climate change.     

Conservation genetics of two island endemic Ribes spp. (Grossulariaceae) of Sardinia: survival or extinction?

Measuring levels of population genetic diversity is an important step for assessing the conservation status of rare or endangered plant species and implementing appropriate conservation strategies. Populations of Ribes multiflorum subsp. sandalioticum and R. sardoum, two endangered endemic species from Sardinia, representing the whole genus on the island, were investigated using ISSR and SSR markers to determine levels and structure of genetic variability in their natural populations. Results indicated medium to low genetic diversity at the population level: Nei's gene diversity for ISSR markers ranged from 0.0840 to 0.1316; the expected heterozygosity (H_E) for SSR ranged from 0.4281 to 0.7012. In addition, only one remnant population of R. sardoum showed a high level of inbreeding, in accordance with its very small size. Regarding the structure of the six R. sandalioticum populations, both principal coordinates analysis (PCoA) and STRUCTURE analysis of ISSR and SSR data highlighted low population structure, although two populations appeared to be clearly distinct from the others. The genetic pattern of the two taxa associated with their different ecological positions indicated resilience of R. sandalioticum populations in fresh and humid habitats and uncertain future resistance for the residual R. sardoum population in xeric calcareous stands. Hence, this study highlights the importance of an integrated conservation approach (genetic plus in situ and ex situ conservation studies/measures) for activating management programmes in these endemic and threatened taxa that can be considered as crop wild relatives of cultivated Ribes species.     

Endemic Seed Plant Species from Hainan Island: A Checklist

Global conservation of plant biodiversity on tropical islands is a major priority, as approximately one third of all endangered plant species are insular endemics. Checklists can be an important first step in determining conservation priorities on islands. Hainan, the largest island in the Indo-Burma Biodiversity Hotspot, and therefore an international focus for conservation, has the most extensive and best preserved tropical forests in China. In this study we enumerate the endemic seed plants of Hainan Island. The checklist was prepared by consulting: (1) several bibliographic/taxonomic data base resources, (2) relevant taxonomic treatments and floras, and (3) plant taxonomists who are actively working with Chinese plants. The checklist also contains information concerning conservation status, the occurrence of Hainan endemics in four protected areas on the island, and available molecular phylogenies. An additional checklist of the species that were until recently thought to be endemic to Hainan, but are no longer considered to be, is also presented. In a separate paper in this issue of Botanical Review the patterns of endemism on Hainan Island are discussed.     

Genetics,taxonomy and the conservation of British <Emphasis Type="Italic">Euphrasia</Emphasis>

In Britain the genus Euphrasia comprises ca 20 diploid and tetraploid plant species, including several endemics. However, their conservation is impeded by taxonomic uncertainty. Analysis of cpDNA and AFLP variation was used to assess their taxonomic status and establish the extent of barriers to gene exchange among them. Differences in ploidy level constitute a very strong barrier to genetic exchange, although this is not absolute. The diploid endemics E. vigursii and E. rivularis form morphologically and genetically definable units which show some level of reproductive isolation. Within tetraploid Euphrasia, the species showed varying degrees of distinctness. Analysis of geographically paired samples from two widespread outcrossing taxa E. arctica and E. nemorosa provides evidence for extensive genetic exchange between them. However AFLP data indicate that this outbreeding species complex possesses a gene pool distinct from that of the widespread inbreeding tetraploids. The widespread and endemic inbreeding tetraploids contain examples of morphologically and genetically definable taxa, but also species whose distinctness is more equivocal. The conservation implications of this study are that species-based action plans are potentially suitable for conservation of the diploid endemics E. vigursii and E. rivularis. In contrast we contend that a species-based conservation framework, developed with reproductively isolated and genetically distinct groups in mind, requires modification for conservation of the complex and dynamic diversity found within the tetraploids. The adoption of ‘taxonomic’ action plans, designed to protect the evolutionary processes generating Euphrasia diversity, may provide a supplementary solution for conserving this type of variation.     

A review of the allozyme data set for the Canarian endemic flora: causes of the high genetic diversity levels and implications for conservation

Background and Aims

Allozyme and reproductive data sets for the Canarian flora are updated in order to assess how the present levels and structuring of genetic variation have been influenced by the abiotic island traits and by phylogenetically determined biotic traits of the corresponding taxa; and in order to suggest conservation guidelines.

Methods

Kruskal–Wallis tests are conducted to assess the relationships of 27 variables with genetic diversity (estimated by A, P, H_o and H_e) and structuring (G_ST) of 123 taxa representing 309 populations and 16 families. Multiple linear regression analyses (MLRAs) are carried out to determine the relative influence of the less correlated significant abiotic and biotic factors on the genetic diversity levels.

Key Results and Conclusions

The interactions between biotic features of the colonizing taxa and the abiotic island features drive plant diversification in the Canarian flora. However, the lower weight of closeness to the mainland than of (respectively) high basic chromosome number, partial or total self-incompatibility and polyploidy in the MLRAs indicates substantial phylogenetic constraint; the importance of a high chromosome number is feasibly due to the generation of a larger number of linkage groups, which increase gametic and genotypic diversity. Genetic structure is also more influenced by biotic factors (long-range seed dispersal, basic chromosome number and partial or total self-incompatibility) than by distance to the mainland. Conservation-wise, genetic structure estimates (F_ST/G_ST) only reflect endangerment under intensive population sampling designs, and neutral genetic variation levels do not directly relate to threat status or to small population sizes. Habitat protection is emphasized, but the results suggest the need for urgent implementation of elementary reproductive studies in all cases, and for ex situ conservation measures for the most endangered taxa, even without prior studies. In non-endangered endemics, multidisciplinary research is needed before suggesting case-specific conservation strategies. The molecular information relevant for conservation should be conserved in a standardized format to facilitate further insight.     

Application of the unified species concept reveals distinct lineages for disjunct endemics of the Brassica repanda (Brassicaceae) complex

Species delimitation is an important issue in terms of conservation priorities, especially for narrow endemics under threat of extinction. The Alpine endemics Brassica repanda subsp. glabrescens and subsp. baldensis belong to a highly polymorphic species complex, although their disjunct distribution suggests favourable conditions for independent evolution. In the present study, we applied the unified species concept to test whether the endemics form distinct evolutionary lineages, both from one another and also from the remainder of the complex. Compliance with the criteria of monophyly, diagnosability, and genotypic clustering was examined, primarily by making use of amplified fragment length polymorphism data. Both endemics were indicated as monophyletic by phylogenetic analyses, and diagnostic characters were found for both taxa. Population structure analyses showed clear genetic discontinuity for each of the endemics, with little admixture among the clusters. This evidence indicates that the endemics have acquired multiple properties that satisfy each of the species criteria considered. Hence, we suggest the taxonomic recognition of B. baldensis and B. glabrescens as separate species. Comparative population genetics analyses show the lack of marked genetic structuring within either taxon, as well as low levels of heterozygosity. Conclusions on the status of threat and on recommended conservation actions are drawn. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 106 , 482–497.     

A geographic mosaic of evolutionary lineages within the insular endemic newt Euproctus montanus

Islands are hotspots of biodiversity, with a disproportionately high fraction of endemic lineages, often of ancient origin. Nevertheless, intra‐island phylogeographies are surprisingly scarce, leading to a scanty knowledge about the microevolutionary processes induced on island populations by Plio‐Pleistocene climatic oscillations, and the manner in which these processes contributed to shape their current genetic diversity. We investigated the phylogeography, historical demography and species distribution models of the Corsican endemic newt Euproctus montanus (north‐western Mediterranean). As for many island endemics, the continuous distribution of E. montanus throughout its range has hitherto been considered as evidence for a single large population, a belief that also guided the species' categorization for conservation purposes. Instead, we found a geographic mosaic of ancient evolutionary lineages, with five main clades of likely Pliocene origin (2.6–5.8 My), all but one restricted to northern Corsica. Moreover, the copresence between main lineages in the same population was limited to a single case. As also suggested by growing literature on intra‐island phylogeographic variation, it seems that the extensive use of simplifying assumption on the population structure and historical demography of island populations—both in theoretical and applicative studies—should be carefully reconsidered, a claim that is well exemplified by the case presented here.     

From Isozymes to Genomics: Population Genetics and Conservation of Agave in México

Mexico is a megadiverse country, but less than 54 % of its original vegetation still remains. In particular Mexican deserts and arid and semiarid ecosystems harbor a large number of endemic taxa, and the genus Agave is an outstanding example. Agave is one of the largest genera of the Mexican flora, including a total estimated number of 200 species, 74 % of them endemic to the country. Agave is also one of the Mexican plant genera with more population genetic studies. We describe here studies in 22 Agave species using different genetic markers. For the genus we found on average a high level of genetic variation, H _s ?=?0.19, and a low genetic differentiation, F _st ?=?0.15. We identify some species that should be subject to special conservation genetic efforts, in particular the endangered A. victoriae-reginae and both wild populations and landraces of A. angustifolia, including the cultivated A. tequilana.     

Progeny-testing of full-sibs IBD in a SSC2 QTL region highlights epistatic interactions for fatness traits in pigs

Background

Tetraena mongolica (Zygophyllaceae), an endangered endemic species in western Inner Mongolia, China. For endemic species with a limited geographical range and declining populations, historical patterns of demography and hierarchical genetic structure are important for determining population structure, and also provide information for developing effective and sustainable management plans. In this study, we assess genetic variation, population structure, and phylogeography of T. mongolica from eight populations. Furthermore, we evaluate the conservation and management units to provide the information for conservation.

Results

Sequence variation and spatial apportionment of the atp B- rbc L noncoding spacer region of the chloroplast DNA were used to reconstruct the phylogeography of T. mongolica. A total of 880 bp was sequenced from eight extant populations throughout the whole range of its distribution. At the cpDNA locus, high levels of genetic differentiation among populations and low levels of genetic variation within populations were detected, indicating that most seed dispersal was restricted within populations.

Conclusions

Demographic fluctuations, which led to random losses of genetic polymorphisms from populations, due to frequent flooding of the Yellow River and human disturbance were indicated by the analysis of BEAST skyline plot. Nested clade analysis revealed that restricted gene flow with isolation by distance plus occasional long distance dispersal is the main evolutionary factor affecting the phylogeography and population structure of T. mongolica. For setting a conservation management plan, each population of T. mongolica should be recognized as a conservation unit.