Denitrification studies in a temperate forest catena soil

Summary Formation of ammonium during the reduction of nitrate under moderate and strict anaerobic incubation of two topsoils of a temperate forest catena, an acid mull and an anmoor was studied. In mull, both conditions of incubation caused reduction of nitrate and release of ammonium. The accumulation of ammonium continued even when there was no nitrate left hence indicating the formation of ammonium apparently through desamination of organic matter. Whereas, in anmoor neither any such formation of ammonium nor any significant reduction of nitrate was observed in the case of moderate anaerobic incubation. But under strict anaerobic incubation, progressive disappearance of nitrate was encountered from the beginning up to 30 days and this was accompanied by an increasing accumulation of ammonium in this soil. Yet this accumulation stopped when there was no nitrate left. Thus, the formation of ammonium is caused by the reduction of nitrate in anmoor.     

High abundance of Crenarchaeota in a temperate acidic forest soil

The objective of the study was to elucidate the depth distribution and community composition of Archaea in a temperate acidic forest soil. Numbers of Archaea and Bacteria were measured in the upper 18 cm of the soil, and soil cores were sampled on two separate occasions using quantitative PCR targeting 16S rRNA genes. Maximum numbers of Archaea were 0.6-3.8 x 10(8) 16S rRNA genes per gram of dry soil. Numbers of Bacteria were generally higher, but Archaea always accounted for a high percentage of the total gene numbers (12-38%). The archaeal community structure was analysed by the construction of clone libraries and by terminal restriction length polymorphism (T-RFLP) using the same Archaea-specific primers. With the reverse primer labelled, T-RFLP analysis led to the detection of four T-RFs. Three had lengths of 83, 185 and 218 bp and corresponded to uncultured Crenarchaeota. One (447 bp) was assigned to Thermoplasmales. Labelling of the forward primer allowed further separation of the T-RF into Crenarchaeota Group I.1c and Group I.1b, and indicated that Crenarchaeota of the Group I.1c were the predominant 16S rRNA genotype (相似文献   

Microbial consumption of atmospheric isoprene in a temperate forest soil

Isoprene (2-methyl-1,3 butadiene) is a low-molecular-weight hydrocarbon emitted in large quantities to the atmosphere by vegetation and plays a large role in regulating atmospheric chemistry. Until now, the atmosphere has been considered the only significant sink for isoprene. However, in this study we performed both in situ and in vitro experiments with soil from a temperate forest near Ithaca, N.Y., that indicate that the soil provides a sink for atmospheric isoprene and that the consumption of isoprene is carried out by microorganisms. Consumption occurred rapidly in field chambers (672.60 +/- 30.12 to 2,718.36 +/- 86.40 pmol gdw day) (gdw is grams [dry weight] of soil; values are means +/- standard deviations). Subsequent laboratory experiments confirmed that isoprene loss was due to biological processes: consumption was stopped by autoclaving the soil; consumption rates increased with repeated exposure to isoprene; and consumption showed a temperature response consistent with biological activity (with an optimum temperature of 30 degrees C). Isoprene consumption was diminished under low oxygen conditions (120 +/- 7.44 versus 528.36 +/- 7.68 pmol gdw day under ambient O(2) concentrations) and showed a strong relationship with soil moisture. Isoprene-degrading microorganisms were isolated from the site, and abundance was calculated as 5.8 x 10 +/- 3.2 x 10 cells gdw. Our results indicate that soil may provide a significant biological sink for atmospheric isoprene.     

Correlation among soil enzyme activities under different forest system management practices

Soil enzyme activities were performed in three permanent no-till and unfertilised plots located in the South of Salamanca province (Spain), the first in a Castanea sativa Mill. paraclimax coppice (CC), the second in a chestnut orchard (CO) and the third in a Quercus pyrenaica Wild. climax forest (Oak), adjacent to the CO plot.We hypothesized that the activities of dehydrogenases, ureases, acid phosphatases, arylsulphatases and β-glucosidases in different forest ecosystems are involved in the carbon, nitrogen and phosphorus cycling and we report their relationship with each other and with physical, chemical and general biochemical parameters of the soils. The main aim of the study was to detect biological criteria for sustainable development in natural degenerate forests of Mediterranean Europe. For this, we used sweet Chestnut (C. sativa Mill) and Oak Q. pyrenaica Wild as models to better define the ecological conditions of these natural resources in terms of nutrient balance, physiology and biological diversity of their communities, to relate them to the conditions of exploitation and land-use changes, for the characterization of sustainable ecological systems.Furthermore, soil respiration was high and significantly different in the chestnut coppice stand than the other two stands, chestnut orchard and oak.Correlations between soil biochemical and soil microbiological variables showed that the three different forest management practices had also a strong effect on soil function conditions. In a discriminate analysis, CC and Oak were discriminated clearly, while CO was in the middle of the biplot sharing some properties with each of the two different groups. Thus, we proposed a soil property transition from the best soil structure and function properties at one chestnut management properties with low tree densities (CC and CO) to other with the worst ones at highest tree density conditions (Oak). According to natural soil conditions in Oak, we assumed that most of the enzyme activities reached their highest levels at highest C and N soil contents but at lowest soil base saturation percentage while they were not at all associated with P soil availability.     

Seasonal dynamics and profiles of soil NO concentrations in a temperate forest

Plant and Soil - Soils are known to be significant sources of atmospheric nitric oxide (NO), a key compound in atmospheric chemistry. NO is a key regulating substance for inter- and intra-species...     

Temperature-independent diel variation in soil respiration observed from a temperate deciduous forest

The response of soil respiration (R_s) to temperature depends largely on the temporal and spatial scales of interest and how other environmental factors interact with this response. They are often represented by empirical exponential equations in many ecosystem analyses because of the difficulties in separating covarying environmental responses and in observing below ground processes. The objective of this study was to quantify a soil temperature‐independent component in R_s by examining the diel variation of an R_s time series measured in a temperate deciduous forest located at Oak Ridge, TN, USA between March and December 2003. By fitting 2 hourly, continuous automatic chamber measurements of CO₂ efflux at the soil surface to a Q₁₀ function to obtain the temperature‐dependent respiration (R_t) and plotting the diel cycles of R_t, R_s, and their difference (R_i), we found that an obvious temperature‐independent component exists in R_s during the growing season. The diel cycle of this component has a distinct day/night pattern and agrees well with diel variations in photosynthetically active radiation (PAR) and air temperature. Elevated canopy CO₂ concentration resulted in similar patterns in the diel cycle of the temperature‐independent component but with different daily average rates in different stages of growing season. We speculate that photosynthesis of the stand is one of the main contributors to this temperature‐independent respiration component although more experiments are needed to draw a firm conclusion. We also found that despite its relatively small magnitude compared with the temperature‐dependent component, the diel variation in the temperature‐independent component can lead to significantly different estimates of the temperature sensitivity of soil respiration in the study forest. As a result, the common practice of using fitted temperature‐dependent function from night‐time measurements to extrapolate soil respiration during the daytime may underestimate daytime soil respiration.     

东北东部森林生态系统土壤呼吸组分的分离量化

对森林生态系统的土壤呼吸组分进行分离和量化,确定不同组分CO2释放速率的控制因子,是估测局域和区域森林生态系统碳平衡研究中必不可少的内容。采用挖壕法和红外气体分析法测定无根和有根样地的土壤表面CO2通量(RS),确定东北东部6种典型森林生态系统RS中异养呼吸(RH)和根系自养呼吸(RA)的贡献量及其影响因子。具体研究目标包括:(1)量化各种生态系统的RH及其与主要环境影响因子的关系;(2)量化各种生态系统RS中根系呼吸贡献率(RC)的季节动态;(3)比较6种森林生态系统RH和RA的年通量。土壤温度、土壤含水量及其交互作用显著地影响森林生态系统的RH(R2=0.465~0.788),但其影响程度因森林生态系统类型而异。硬阔叶林和落叶松人工林的RH主要受土壤温度控制,其他生态系统RH受土壤温度和含水量的联合影响。各个森林生态系统类型的RC变化范围依次为:硬阔叶林32.40%~51.44%;杨桦林39.72%~46.65%;杂木林17.94%~47.74%;蒙古栎林34.31%~37.36%;红松人工林33.78%~37.02%;落叶松人工林14.39%~35.75%。每个生态系统类型RH年通量都显著高于RA年通量,其变化范围分别为337~540 gC.m-2.a-1和88~331 gC.m-2.a-1。不同生态系统间的RH和RA也存在着显著性差异。     

Response of litter decomposition and related soil enzyme activities to different forms of nitrogen fertilization in a subtropical forest

With the continuing increase in the impact of human activities on ecosystems, ecologists are increasingly becoming interested in understanding the effects of nitrogen deposition on litter decomposition. At present, numerous studies have investigated the effects of single form of nitrogen fertilization on litter decomposition in forest ecosystems. However, forms of N deposition vary, and changes in the relative importance of different forms of N deposition are expected in the future. Thus, identifying the effects of different forms of N deposition on litter decomposition in forest ecosystems is a pressing task. In this study, two dominant litter types were chosen from Zijin Mountain in China: Quercus acutissima leaves from a late succession broad-leaved forest and Pinus massoniana needles from an early succession coniferous forest. The litter samples were incubated in microcosms with original forest soil and treated with four different forms of nitrogen fertilization [NH₄ ⁺, NO₃ ⁻, CO(NH₂)₂, and a mix of all three]. During a 5-month incubation period, litter mass losses, soil pH values, and soil enzyme activities were determined. Results show that all four forms of nitrogen fertilization significantly accelerate litter decomposition rates in the broadleaf forest, while only two forms of nitrogen fertilization [i.e., mixed nitrogen and CO(NH₂)₂] significantly accelerate litter decomposition rates in the coniferous forest. Litter decomposition rates with the mixed nitrogen fertilization were higher than those in any single form of nitrogen fertilization. All forms of nitrogen fertilization enhanced soil enzyme activities (i.e., catalase, cellulase, invertase, polyphenol oxidase, nitrate reductase, urease, and acid phosphatase) during the litter decomposition process for the two forest types. Soil enzyme activities under the mixed nitrogen fertilization were higher than those under any single form of nitrogen fertilization. These results suggest that the type and activity of the major degradative enzymes involved in litter decomposition vary in different forest types under different forms of nitrogen fertilization. They also indicate that a long-term consequence of N deposition-induced acceleration of litter decomposition rates in subtropical forests may be the release of carbon stored belowground to the atmosphere.     

Basal rates of soil respiration are correlated with photosynthesis in a mixed temperate forest

Many field studies have demonstrated that soil temperature explains most of the temporal variation in soil respiration (SR). However, there is increasing evidence to suggest that SR is also influenced by current, or recent, photosynthate. Accordingly, seasonal changes in SR nominally attributed to temperature may, in part, be due to seasonality in photosynthesis. Within a mixed coniferous–deciduous temperate forest, we measured SR and used the process model SECRETS to test whether seasonal changes in photosynthesis influence seasonal differences in SR. Measurements were made in six adjacent plots (from pure evergreen to pure deciduous) that exhibited a gradient in the seasonality of photosynthesis. Within all six plots, we found strong correlations between the basal rate of SR (BR; defined as the SR at 10°C) and modeled photosynthesis (i.e. gross primary productivity; GPP). Moreover, we observed larger seasonal changes in BR in those plots that exhibited larger seasonal changes in photosynthesis, as compared with plots with smaller changes in photosynthesis. This is relevant because estimates of the Q₁₀ of SR (Q₁₀ is the relative change in a process rate per temperature change of 10°C) typically assume a constant BR. Our results therefore support the hypothesis that differences in the apparent Q₁₀ of SR (apparent Q₁₀=Q₁₀ derived from field measurements of SR and temperature) among studies may, in large part, be related to seasonal differences in photosynthesis. We suggest that variation in stand structure and species composition and, thus, in the photosynthetic signatures, induce different seasonal changes in BR via differences in the belowground supply of labile carbon. If these seasonal changes in BR are not properly accounted for, fitted apparent Q₁₀ values may not express the temperature response of respiratory processes in the soil.     

Contribution of litter layer to soil greenhouse gas emissions in a temperate beech forest

Background and aims

The litter layer is a major source of CO₂, and it also influences soil-atmosphere exchange of N₂O and CH₄. So far, it is not clear how much of soil greenhouse gas (GHG) emission derives from the litter layer itself or is litter-induced. The present study investigates how the litter layer controls soil GHG fluxes and microbial decomposer communities in a temperate beech forest.

Methods

We removed the litter layer in an Austrian beech forest and studied responses of soil CO₂, CH₄ and N₂O fluxes and the microbial community via phospholipid fatty acids (PLFA). Soil GHG fluxes were determined with static chambers on 22 occasions from July 2012 to February 2013, and soil samples collected at 8 sampling events.

Results

Litter removal reduced CO₂ emissions by 30 % and increased temperature sensitivity (Q₁₀) of CO₂ fluxes. Diffusion of CH₄ into soil was facilitated by litter removal and CH₄ uptake increased by 16 %. This effect was strongest in autumn and winter when soil moisture was high. Soils without litter turned from net N₂O sources to slight N₂O sinks because N₂O emissions peaked after rain events in summer and autumn, which was not the case in litter-removal plots. Microbial composition was only transiently affected by litter removal but strongly influenced by seasonality.

Conclusions

Litter layers must be considered in calculating forest GHG budgets, and their influence on temperature sensitivity of soil GHG fluxes taken into account for future climate scenarios.

     

Molecular evidence for the presence of novel actinomycete lineages in a temperate forest soil

PCR primers were designed to selectively recover partial (1100 bp) actinomycete 16S ribosomal DNA sequences from a temperate forest soil. A gene library was made and colony PCR was used to identify clones containing inserts. Unique clones were identified and partial or complete insert sequences were determined for 53 clones. Phylogenetic analyses revealed that 46 (87%) of the clones sampled contained 16S rDNA sequences which fell within the actinomycete radiation. The largest group of 34 sequences formed two closely related monophyletic groups in the 16S rRNA tree, which in turn formed a weakly supported sister group with the sequence fromActinomadura madurae. Four novel 16S rDNA lineages were detected inMycobacterium, one inPropionibacterium and one inCorynebacterium. Three novel sequences weakly grouped withSporichthya polymorpha. Two sequences formed an isolated lineage not closely related to any of the reference actinomycetes. Our results lend strong support to the hypothesis that cultured (and sequenced) actinomycetes do not adequately describe the diversity of this group in the environment.     

Fine root mass in relation to soil N supply in a cool temperate forest

Soil inorganic nitrogen supply and fine root mass in the top layers of mineral soil (0–5 and 5–10cm) were investigated at upper and lower sites of a cool temperate forest where Fagus crenata and Quercus crispula dominate. At both sites, soil inorganic nitrogen supply was greatest in the 0–5cm layer. The predominant forms of soil inorganic nitrogen supply were NH₄⁺-N at the upper site and NO₃^–-N at the lower site. Fine roots were concentrated in the 0–5cm layer at the upper site, but not at the lower site. The form of supplied soil inorganic nitrogen supply can be important in determining the vertical distribution of fine roots.     

森林类型对土壤有机质、微生物生物量及酶活性的影响

以澳大利亚南昆士兰州典型森林类型——湿地松、南洋杉和贝壳杉林为对象,开展土壤可溶性有机碳和氮(SOC和SON)、微生物生物量碳和氮(MBC和MBN),以及土壤酶活性的研究,剖析森林类型对土壤质量的影响.结果表明:不同林型土壤SOC、SON含量分别在552 ～1154 mg·kg-1和20.11～57.32mg·kg-1;MBC、MBN分别在42～149 mg·kg-1和7～35 mg·kg-1.MBC、MBN之间呈显著相关.土壤几丁质酶、酸性磷酸酶、碱性磷酸酶和β-葡萄糖苷酶的活性分别为2.96 ～7.63、16.5 ～29.6、0.79 ～ 3.42和3.71 ～9.93 μg ·g-1·h-1,亮氨酸氨肽酶活性为0.18～0.46 μg·g-1·d-1.不同林型土壤SOC含量,以及土壤几丁质酶和亮氨酸氨肽酶活性为湿地松林、南洋杉林、贝壳杉林依次降低;而SON含量为南洋杉林＞贝壳杉林＞湿地松林,且南洋杉林的SON含量显著(P＜0.05)高于湿地松林;MBC和MBN以及碱性磷酸酶活性为贝壳杉林＞湿地松林＞南洋杉林;酸性磷酸酶和β-葡萄糖苷酶活性为湿地松林＞贝壳杉林＞南洋杉林.在土壤生物代谢因子中,MBC、MBN、SON和亮氨酸氨肽酶对不同森林类型土壤影响较大.     

Effects of soil frost on nitrogen net mineralization, soil solution chemistry and seepage losses in a temperate forest soil

Freezing and thawing may alter element turnover and solute fluxes in soils by changing physical and biological soil properties. We simulated soil frost in replicated snow removal plots in a mountainous Norway spruce stand in the Fichtelgebirge area, Germany, and investigated N net mineralization, solute concentrations and fluxes of dissolved organic carbon (DOC) and of mineral ions (NH₄⁺, NO₃⁻, Na⁺, K⁺, Ca²⁺, Mg²⁺). At the snow removal plots the minimum soil temperature was −5 °C at 5 cm depth, while the control plots were covered by snow and experienced no soil frost. The soil frost lasted for about 3 months and penetrated the soil to about 15 cm depth. In the 3 months after thawing, the in situ N net mineralization in the forest floor and upper mineral soil was not affected by soil frost. In late summer, NO₃⁻ concentrations increased in forest floor percolates and soil solutions at 20 cm soil depth in the snow removal plots relative to the control. The increase lasted for about 2–4 months at a time of low seepage water fluxes. Soil frost did not affect DOC concentrations and radiocarbon signatures of DOC. No specific frost effect was observed for K⁺, Ca²⁺ and Mg²⁺ in soil solutions, however, the Na⁺ concentrations in the upper mineral soil increased. In the 12 months following snowmelt, the solute fluxes of N, DOC, and mineral ions were not influenced by the previous soil frost at any depth. Our experiment did not support the hypothesis that moderate soil frost triggers solute losses of N, DOC, and mineral ions from temperate forest soils.     

Local-scale determinants of elemental stoichiometry of soil in an old-growth temperate forest

Plant and Soil - Determining which strategies confer a competitive advantage in variable environments with strong short-term resource fluctuations (i.e., seasonal drought and flooding) is critical...     

模拟氮沉降及经营方式对毛竹林土壤酶活性的影响

研究粗放经营和集约经营条件下毛竹林蔗糖酶、纤维素酶、硝酸还原酶、脲酶和过氧化氢酶5种土壤酶活性对4种氮沉降水平(0、30、60和90 kg·hm^-2·a^-1)的响应.结果表明:与粗放经营相比,集约经营分别显著提高土壤蔗糖酶、纤维素酶和脲酶活性55.5%、112.9%和28.6%,显著抑制硝酸还原酶活性31.5%,对过氧化氢酶活性的影响不显著.氮沉降显著抑制粗放和集约经营方式下毛竹林蔗糖酶活性20.0%～49.4%和36.2%～45.1%、纤维素酶活性20.5%～46.3%和18.3%～49.0%、硝酸还原酶活性67.9%～85.2%和15.2%～34.2%,以及集约经营毛竹林脲酶活性23.1%～47.6%,显著增加了粗放经营毛竹林土壤脲酶活性8.1%～50.6%,对过氧化氢酶活性的影响不显著.氮沉降与经营方式的复合作用除对过氧化氢酶活性的影响不显著外,对其他4种土壤酶活性的影响均达到显著水平.     

Four years of litter input manipulation changes soil microbial characteristics in a temperate mixed forest

Aboveground litter not only is an important source of nutrients to soil microbes but also regulates the microclimate in topsoil. How the changes in aboveground litter quantity would affect the microbial biogeochemical cycles is still unclear. Here we conducted a litter input manipulation experiment in a temperate mixed forest to investigate how different amounts of litter input affect soil organic carbon (SOC) and soil respiration via their regulation on soil microbes. We found that although neither SOC stock nor soil CO₂ efflux was affected by litter manipulation, soil microbial characteristics had responded after four years of litter addition or removal treatments. Microbial biomass carbon (MBC) in the O horizon was higher in litter addition plots than in litter removal plots as a result of the changed availability of labile C under litter treatments. Both double litter and no litter treatments changed microbial compositions, which was probably due to the increased soil pH in no litter treatment and the increased labile C in double litter treatment. The null change in soil respiration could be attributed to the offset between the negative effect of decreased substrate and the positive effect of increased temperature on soil respiration in litter removal plots. Due to the important role of soil microbes in carbon cycling, the altered microbial properties under litter manipulation treatments suggested the inevitable changes in biogeochemical cycling in the long run and call for long-term studies on SOC dynamics in the future.

     

Strengthened insectivory in a temperate fragmented forest

Habitat fragmentation modifies ecological patterns and processes through changes in species richness and abundance. In the coastal Maulino forest, central Chile, both species richness and abundance of insectivorous birds increases in forest fragments compared to continuous forest. Through a field experiment, we examined larvae predation in fragmented forests. Higher richness and abundance of birds foraging at forest fragments translated into more insect larvae preyed upon in forest fragments than in continuous forest. The assessed level of insectivory in forest fragments agrees with lower herbivory levels in forest fragments. This pattern strongly suggests the strengthening of food interactions web in forest fragments of coastal Maulino forest.Electronic Supplementary Material Supplementary material is available for this article at and is accessible for authorized users.     

Increased soil respiration in response to experimentally reduced snow cover and increased soil freezing in a temperate deciduous forest

Winter snowpack in seasonally snow-covered regions plays an important role in moderating ecosystem processes by insulating soil from freezing air temperatures. However, climate models project a decline in snowpack at mid and high latitudes over the next century. We conducted a snow removal experiment in a temperate deciduous forest at Harvard Forest in Massachusetts, USA to quantify the effects of a reduced winter snowpack and increased soil freezing on total soil respiration and its bulk (i.e. heterotrophic) and root-rhizosphere components. Snow removal increased soil freezing severity by more than three-fold, which resulted in a 27.6% increase in annual total soil respiration (p?=?0.058). Across our plots and years of this study, we found that the severity, rather than simply the presence of soil freezing, was the primary driver of the soil respiration response to reduced winter snowpack. Bulk soil respiration made the largest contribution to total soil respiration with root-rhizosphere respiration contributing up to 26.1?±?6.5% of total soil respiration across plot types and years. Snow removal significantly increased fine root mortality (p?=?0.03), which was positively correlated with soil frost depth and duration (p?=?0.068, \({\text{R}}_{{{\text{LMM}}(m)}}^{ 2}\)?=?0.46), rates of total soil respiration (p?=?0.075; \({\text{R}}_{{{\text{LMM}}(m)}}^{ 2}\)?=?0.27) and the contribution of root-rhizosphere respiration to total soil respiration (p?=?0.004; \({\text{R}}_{{{\text{LMM}}(m)}}^{ 2}\)?=?0.58). We conclude that increased rates of soil respiration in response to soil freezing are driven by plant-mediated processes, whereby soil frost-induced root mortality stimulates respiration through decomposition of root necromass with additional enhancements possibly related to priming of soil organic matter decomposition and elevated rates of root respiration associated with growth.