Cycles within cycles: the interplay between differentiation and cell division in Trypanosoma brucei

The life cycle o f the African trypanosome is divided between the mammal and the tsetse. Those life cycle stages which traverse between these two hosts appear to be pre-adopted for survival in their new habitat They are also non-dividing. Here, Keith Matthews and Keith Gull discuss how and why trypanosomes might enmesh the control o f their cell cycle with their regulation o f the transition between different life cycle forms.     

Trematode life cycles: short is sweet?

Complex life cycles are a hallmark of parasitic trematodes. In several trematode taxa, however, the life cycle is truncated: fewer hosts are used than in a typical three-host cycle, with fewer transmission events. Eliminating one host from the life cycle can be achieved in at least three different ways. Some trematodes show even more extreme forms of life cycle abbreviations, using only a mollusc to complete their cycle, with or without sexual reproduction. The occurrence of these phenomena among trematode families are reviewed here and show that life cycle truncation has evolved independently many times in the phylogeny of trematodes. The hypotheses proposed to account for life-cycle truncation, in addition to the factors preventing the adoption of shorter cycles by all trematodes are also discussed. The study of shorter life cycles offers an opportunity to understand the forces shaping the evolution of life cycles in general.     

Carbon Nanofiber Production

Holistic understanding of nanotechnology using systems analysis tools is essential for evaluating claims about the potential benefits of this emerging technology. This article presents one of the first assessments of the life cycle energy requirements and environmental impact of carbon nanofibers (CNFs) synthesis. Life cycle inventory data are compiled with data reported in the open literature. The results of the study indicate relatively higher life cycle energy requirements and higher environmental impact of CNFs as compared to traditional materials, like primary aluminum, steel, and polypropylene, on an equal mass basis. Life cycle energy requirements for CNFs from a range of feedstock materials are found to be 13 to 50 times that of primary aluminum on an equal mass basis. Similar trends are observed from the results of process life cycle assessment (LCA), as conveyed by different midpoint and endpoint damage indicators. Savings in life cycle energy consumption and, hence, reductions in environmental burden are envisaged if higher process yields of these fibers can be achieved in continuous operations. Since the comparison of CNFs is performed on an equal mass basis with traditional materials, these results cannot be generalized for CNF‐based nanoproducts. Quantity of use of these engineered nanomaterials and resulting benefits will decide their energy and environmental impact. Nevertheless, the life cycle inventory and the results of the study can be used for evaluating the environmental performance of specific CNF‐based nanoproducts.     

植物生活史型的多样性及动态分析

主要阐述了植物生活史型的基本定义和基本模式。根据植物的生态幅（Ｅｃｏｌｏｇｉｃａｌ　ａｍｐｌｉｔｕｄｅ）、适合度（Ｆｉｔｎｅｓｓ）和能量分配格局将植物生活史型划分出Ｖ生活史型、Ｓ生活史型和ｃ生活史型３个基本类型以及ＶＳ生活史型、ＳＶ生活史型、ｃＳ生活史型、Ｓｃ生活史型等６个具有混合特征的过渡类型。文中分析了权衡（丁ｒａｄｅ—ｏｆｆ）植物生活史各阶段的能量需求,使之合理地进行能量分配,进而使植物生活史型获得最佳的繁殖和存活效益以及最大的适合度的重要性,指出韧生代谢和次生代谢增值物生活史型及其生活史型之间相互转换的密切关系。韧生代谢物质主要用于营养生长,次生代谢物质主要用于促进繁育和拮抗环境胁迫。植物生活史型在特定时空中依生境的连续变化而发生相互转换,呈现出具动态特征的植物生活史型诺。提出了植物生活史型的形成机制,即生境中的资源状况和干扰程度构成了环境筛的径度,进而形成选择压力,以使植物按需分配能量,合成初级代谢产物或次级代谢产物来应对选择压力,形成自身的生态幅和适应对策,最终与生境相互作用过程中表现出的适合度来表征相应的生活史型。还提出了植物生活史型之间相互转化的机制,即每一种植物生活史型均有与该生活史型相对应的生境类型、选择压力、代谢物质和生活史对策,由于时空的连续变化,生境类型也发生过渡性变化,形成过渡类型（ＥＤ、ＤＥ、ＤＦ、ＦＤ）,因而导致选择压力、代谢物质、生活史对策也发生过渡性变化,形成过渡类型ＬＭ、ＭＬ、ＭＨ、ＨＭ、ＫＲ、ＲＫ、ＲＴ、ＴＲ、ＢＰ、ＰＢ、ＰＡ、ＡＰ,最终通过ＶＳ、ＳＶ、ＳＣ、ＣＳ等过渡类型的形成而实现植物生活史型之间的相互转换。文中以高山红景天（Ｒｈｏｄｉｏｌａ　ｓａｃｈａｌｉｎｅｎｓｉｓ）等５种植物生活史型谱为例,分析了各植物生活史型谱的动态特征并指出：Ｖ生活史型的植物因营养体较为发达、寿命较长,且能通过正常的有性生殖繁衍后代,通常都能产生稳定种群;以Ｓ生活史型为主的植物,因台子中含有来自双亲的两套基因,故有性生殖过程能产生较多遗传性不同的后代,使种群的适应环境变化的能力加强,因而容易形成爆发种群;以ｃ生活史型为主的植物,其遗传物质与母体完全相同,故种群适应环境变化的能力较弱,因而容易导致种群濒危。     

Mechanisms of stage-regulated gene expression in kinetoplastida

During their life cycle, trypanosomatid parasites of mammals encounter substantially different environments in their hosts and insect vectors, to which they must adapt by undergoing a series of differentiation processes. At the molecular level, these processes must be the direct result of an elaborate series of changes in stage-regulated expression of a wide range of gene products. How are these changes accomplished? In this review, Sheila Graham discusses some recent advances in understanding the mechanisms of gene expression in trypanosomatids, and examines some clues to some intriguingly complex means of regulating life cycle stage-specific gene expression.     

Gimme shelter – the relative sensitivity of parasitic nematodes with direct and indirect life cycles to climate change

Climate change is expected to alter the dynamics of host–parasite systems globally. One key element in developing predictive models for these impacts is the life cycle of the parasite. It is, for example, commonly assumed that parasites with an indirect life cycle would be more sensitive to changing environmental conditions than parasites with a direct life cycle due to the greater chance that at least one of their obligate host species will go extinct. Here, we challenge this notion by contrasting parasitic nematodes with a direct life cycle against those with an indirect life cycle. Specifically, we suggest that behavioral thermoregulation by the intermediate host may buffer the larvae of indirectly transmitted parasites against temperature extremes, and hence climate warming. We term this the ‘shelter effect’. Formalizing each life cycle in a comprehensive model reveals a fitness advantage for the direct life cycle over the indirect life cycle at low temperatures, but the shelter effect reverses this advantage at high temperatures. When examined for seasonal environments, the models suggest that climate warming may in some regions create a temporal niche in mid‐summer that excludes parasites with a direct life cycle, but allows parasites with an indirect life cycle to persist. These patterns are amplified if parasite larvae are able to manipulate their intermediate host to increase ingestion probability by definite hosts. Furthermore, our results suggest that exploiting the benefits of host sheltering may have aided the evolution of indirect life cycles. Our modeling framework utilizes the Metabolic Theory of Ecology to synthesize the complexities of host behavioral thermoregulation and its impacts on various temperature‐dependent parasite life history components in a single measure of fitness, R₀. It allows quantitative predictions of climate change impacts, and is easily generalized to many host–parasite systems.     

Defining the baseline in social life cycle assessment

Background, aim and scope  

A relatively broad consensus has formed that the purpose of developing and using the social life cycle assessment (SLCA) is to improve the social conditions for the stakeholders affected by the assessed product’s life cycle. To create this effect, the SLCA, among other things, needs to provide valid assessments of the consequence of the decision that it is to support. The consequence of a decision to implement a life cycle of a product can be seen as the difference between the decision being implemented and ‘non-implemented’ product life cycle. This difference can to some extent be found using the consequential environmental life cycle assessment (ELCA) methodology to identify the processes that change as a consequence of the decision. However, if social impacts are understood as certain changes in the lives of the stakeholders, then social impacts are not only related to product life cycles, meaning that by only assessing impacts related to the processes that change as a consequence of a decision, not all changes in the life situations of the stakeholders will be captured by an assessment following the consequential ELCA methodology. This article seeks to identify these impacts relating to the non-implemented product life cycle and establish indicators for their assessment.     

Cytokine involvement in viral permissiveness and the progression of HIV disease

Many viruses have evolved novel means of exploiting host defense mechanisms for their own survival. This exploitation may be best exemplified by the interrelationships between certain viruses and the host cytokine networks. Many viruses, including the human immunodeficiency virus type-1 (HIV-1), rely on the liberation and cellular action of host immune cytokines to expand their host cell range, to regulate their cellular expression, and to maintain their dormant state until the proper extracellular conditions arise. As again exemplified by HIV-1, viruses may also take an active role regulating cytokine expression and cell surface cytokine receptors. Because the viral life cycle, and in particular the HIV-1 life cycle, is so intertwined with cytokine regulatory networks, these networks represent potential points for therapeutic intervention. As our understanding of cellular cytokine pathways involved in viral infection and replication continues to expand, so too will our ability to design rational anti-viral therapies to alter multiple steps along the viral life cycle.     

Differential Influence of Life Cycle on Growth and Toxin Production of three Pseudo‐nitzschia Species (Bacillariophyceae)

We used a multistrain approach to study the intra‐ and interspecific variability of the growth rates of three Pseudo‐nitzschia species – P. australis, P. fraudulenta, and P. pungens – and of their domoic acid (DA) production. We carried out mating and batch experiments to investigate the respective effects of strain age and cell size, and thus the influence of their life cycle on the physiology of these species. The cell size – life cycle relationship was characteristic of each species. The influence of age and cell size on the intraspecific variability of growth rates suggests that these characteristics should be considered cautiously for the strains used in physiological studies on Pseudo‐nitzschia species. The results from all three species do not support the hypothesis of a decrease in DA production with time since isolation from natural populations. In P. australis, the cellular DA content was rather a function of cell size. More particularly, cells at the gametangia stage of their life cycle contained up to six times more DA than smaller or larger cells incapable of sexual reproduction. These findings reveal a link between P. australis life cycle and cell toxicity. This suggest that life cycle dynamics in Pseudo‐nitzschia natural populations may influence bloom toxicity.     

The evolution of life cycle complexity in aphids: Ecological optimization or historical constraint?

For decades, biologists have debated why many parasites have obligate multihost life cycles. Here, we use comparative phylogenetic analyses of aphids to evaluate the roles of ecological optimization and historical constraint in the evolution of life cycle complexity. If life cycle complexity is adaptive, it should be evolutionarily labile, that is, change in response to selection. We provide evidence that this is true in some aphids (aphidines), but not others (nonaphidines)—groups that differ in the intensity of their relationships with primary hosts. Next, we test specific mechanisms by which life cycle complexity could be adaptive or a constraint. We find that among aphidines there is a strong association between complex life cycles and polyphagy but only a weak correlation between life cycle complexity and reproductive mode. In contrast, among nonaphidines the relationship between life cycle complexity and host breadth is weak but the association between complex life cycles and sexual reproduction is strong. Thus, although the adaptiveness of life cycle complexity appears to be lineage specific, across aphids, life cycle evolution appears to be tightly linked with the evolution of other important natural history traits.     

A multi-criteria decision-making model for classifying wood products with respect to their impact on environment

Background, aim and scope  

Although life cycle assessment is frequently used in scientific studies of product comparison, many practitioners are looking for improvements in the normalisation, grouping and weighting of life cycle inventory results. Local conditions, which are well known to local experts, are very important to these steps. The goal of this work was to develop a computer-based decision support system for classifying wood products according to their influence on the environment in their whole life cycle. The model specifically addresses local conditions in the Republic of Slovenia and was developed by Slovenian experts.     

The jellyfish and its polyp: a comparative study of gene expression monitored by the protein patterns, using two-dimensional gels with double-label autoradiography

The life cycle of Podocoryne carnea (Coelenterata, Anthomedusae) shows several distinct stages which differ considerably in terms of their ecology, morphology, cellular composition, and ultrastructure. Previously these stages had even been described as separate species. Using two-dimensional gel electrophoresis and a new method of double-label autoradiography, we show here for the first time for metagenic hydrozoans that only minor differences in gene expression exist between the various life cycle stages. Our results demonstrate the high resolution power of these techniques and show that the different life stages of P. carnea remain rather similar on the protein level. Most of the prominent spots of the two-dimensional gel protein patterns are common to all stages studied. These data show that the hydrozoan life cycle and development are regulated by only minor distinctions in gene expression which possibly explains the great morphogenetic repertoire of these animals described in many studies.     

REPLY TO COMMENT ON THE LIFE CYCLE AND TOXICITY OF PFIESTERIA PISCICIDA REVISITED1

Free‐living, marine dinoflagellates are typified by a well‐defined, haplontic life cycle with relatively few stages. The most unusual departure from this life cycle is one reported for the heterotrophic dinoflagellate Pfiesteria piscicida Steidinger et Burkholder. This species is alleged to have at least 24 life cycle stages including amoebae and a chrysophyte‐like cyst form ( Burkholder et al. 1992 , Burkholder and Glasgow 1997a ) not previously known in free‐living marine dinoflagellates. Litaker et al. (2002) redescribed the life cycle of P. piscicida from single‐cell isolates and found only life cycle stages typical of free‐living marine dinoflagellates. The discrepancy between these observations and the life cycle reported in the literature prompted a rigorous study to resolve the life cycle of P. piscicida. Burkholder and Glasgow (2002) took exception to this study, arguing that Litaker et al. (2002) misunderstood the life cycle of P. piscicida and ignored recent publications. We present a rebuttal of their criticisms and suggest a simple way to resolve the discrepancies in the P. piscicida life cycle.     

The ecology of temporary streams II. General remarks on temporary streams

This, the second of two papers on the ecology of temporary streams, attempts a generalization of the unique features of these habitats. The fauna is shown to consist of three main groups: permanent stream species, facultative species and specialized species. The members of certain major taxonomic groups tend to oversummer as similar stages in their life cycles and the oversummering method used reflects the type of life cycle exhibited by a particular species. These variations in life cycle lead to faunal succession. The coexistence of closely related species is shown to be common in temporary aquatic habitats and, as far as the most abundant taxa are concerned, the species composition is very stable from year to year.     

Roles of Apicomplexan protein kinases at each life cycle stage

Inhibitors of cellular protein kinases have been reported to inhibit the development of Apicomplexan parasites, suggesting that the functions of protozoan protein kinases are critical for their life cycle. However, the specific roles of these protein kinases cannot be determined using only these inhibitors without molecular analysis, including gene disruption. In this report, we describe the functions of Apicomplexan protein kinases in each parasite life stage and the potential of pre-existing protein kinase inhibitors as Apicomplexan drugs against, mainly, Plasmodium and Toxoplasma.     

Cnidarians as a model system for understanding evolution and regeneration

Hydra and Podocolyne are two cnidarian animals which provide complementary advantages for analysing developmental mechanisms possibly reflecting the basic developmental processes shared by most bilaterians. Interestingly, these mechanisms remain accessible all along the life of these animals, which bud and regenerate, whatever their age. The Hydra polyp permits a direct study of the molecular cascades linking amputation to regeneration. Podocoryne displays a complete life cycle, polyp and medusa stages with a fast and inducible sexual cycle and an unparalleled In vitro transdifferentiation potential. In both cases, a large number of evolutionarily conserved molecular markers are available, and analysis of their regulation highlights the molecular mechanisms which underly pattern formation in these two species.     

Addressing the effect of social life cycle assessments

Purpose

In the recently published ??Guidelines for social life cycle assessment of products??, it is stated that the ultimate objective of developing the social life cycle assessment (SLCA) is to promote improvements of social conditions for the stakeholders in the life cycle. This article addresses how the SLCA should be developed so that its use promotes these improvements.

Methods

Hypotheses of how the use of SLCA can promote improvement of social conditions in the life cycle are formulated, after which theories and empirical findings from relevant fields of research are used to address the validity of these hypotheses.

Results

Three in some cases potentially overlapping SLCA approaches are presented, assumed to create a beneficial effect in the life cycle in different ways. However, empirical and theoretical findings show that the beneficial effects proposed to arise from the use of each of these three approaches may all be problematic. Some of these problems may be mitigated through methodological modifications.

Conclusions

Given the significant problems in relation to creating an effect through the use of the SLCAs, and given the significant practical problems in applying the SLCAs, it is questioned whether the development of SLCA is a fruitful approach for improving social conditions in the product life cycle.     

Evolution of haploid–diploid life cycles when haploid and diploid fitnesses are not equal

Many organisms spend a significant portion of their life cycle as haploids and as diploids (a haploid–diploid life cycle). However, the evolutionary processes that could maintain this sort of life cycle are unclear. Most previous models of ploidy evolution have assumed that the fitness effects of new mutations are equal in haploids and homozygous diploids, however, this equivalency is not supported by empirical data. With different mutational effects, the overall (intrinsic) fitness of a haploid would not be equal to that of a diploid after a series of substitution events. Intrinsic fitness differences between haploids and diploids can also arise directly, for example because diploids tend to have larger cell sizes than haploids. Here, we incorporate intrinsic fitness differences into genetic models for the evolution of time spent in the haploid versus diploid phases, in which ploidy affects whether new mutations are masked. Life‐cycle evolution can be affected by intrinsic fitness differences between phases, the masking of mutations, or a combination of both. We find parameter ranges where these two selective forces act and show that the balance between them can favor convergence on a haploid–diploid life cycle, which is not observed in the absence of intrinsic fitness differences.