鹅源新城疫病毒拯救体系的建立

参照GenBank上公布的鹅源新城疫病毒ZJI株全序列,设计8对引物,经RT-PCR法从尿囊液中扩增目的片段后,分别克隆进pCR2.1载体,将Ⅰ～Ⅶ7对引物的扩增片段依次亚克隆到TVT7R转录载体中,构建了含NDV全基因组cDNA的转录载体(pNDVZJI),将Ⅴ、Ⅵ和Ⅷ3对引物的扩增片段分别克隆进pCR2.1载体,并亚克隆到表达质粒pCI-neo上,构建了L基因的真核表达载体(pCI-L),pNDVZJI、pCI-L与另外两个辅助表达质粒(pCI-NP和pCI-P)共转染BSR-T7/5细胞,成功拯救出了具有血凝性的鹅源新城疫病毒,ZJI株鹅源新城疫病毒的成功拯救为后续相关研究工作的开展打下了基础。     

鹅源新城疫病毒ZJ1株微型基因组的构建及其初步应用

在获得鹅源新城疫病毒ZJ1株全基因组序列的基础上,用增强型绿色荧光蛋白（eGFP）报告基因取代鹅源新城疫病毒ZJ1株整个编码区,只保留与病毒复制、转录和病毒粒子包装相关的调控序列,将其反向克隆入转录载体TVT7R(0.0)中,构建了该毒株的微型基因组。当转染用辅助病毒ZJ1株感染的Hep_2细胞时报告基因得到表达,表明此微型 基因组RNA可被辅助病毒提供的NP、P和L蛋白翻译。同时将该病毒NP、P和L蛋白基因分别克隆入真核表达载体pCI_neo中,构建了表达该病毒NP、P与L蛋白的辅助质粒,用此微型基因组对辅助质粒的表达产物进行了功能鉴定并对该病毒拯救过程中痘苗病毒的最适感染剂量进行了摸索。以上研究为该病毒的成功拯救及开展其它相关研究奠定了基础。     

含RGD受体结合位点口蹄疫病毒Asia1/JS/China/2005株的拯救及初步鉴定

摘要：【目的】构建含有RGD受体结合位点口蹄疫病毒（FMDV）Asia1/JS/China/2005株的全长感染性cDNA克隆。【方法】采用定点突变方法,构建Asia1型FMDV含有预期突变的全长cDNA克隆pFMDV-RGD。pFMDV-RGD重组质粒经NotI线化后,与表达T7 RNA聚合酶的真核质粒pcDNAT7P共转染BHK-21细胞,进行FMDV-RGD病毒拯救。【结果】序列测定结果表明成功构建了FMDV含有RGD受体位点的Asia1/JS/China/2005全长cDNA克隆。共转染实验获得拯救病毒,对拯救的病毒分别进行序列测定、间接免疫荧光、电子显微镜观察和乳鼠致病性分析,表明成功拯救了含有RGD受体结合位点的Asia1/JS/China/2005株FMDV。【结论】该实验为进一步研究含有RGD和RDD受体结合位点2个拯救病毒生物学特性的差异奠定了基础。     

基于T7启动子表达系统的牛副流感病毒3型微型基因组的构建与拯救

【目的】通过负链RNA病毒反向遗传学操作,构建并拯救以T7启动子表达系统为基础的牛副流感病毒3型(Bovine parainfluenza virus type 3,BPIV3)微型基因组。【方法】分别构建表达该病毒NP、P和L蛋白的辅助质粒px8δT-PT1-b PIV3-NP、px8δT-PT1-b PIV3-P和px8δT-PT1-b PIV3-L以及含增强型绿色荧光蛋白(Enhanced green fluorescent protein,EGFP)开放读码框(Open reading frame,ORF)、BPIV3前导序列(Leader region)、转录起始信号(Gene start signal,GS)、转录终止信号(Gene end signal,GE)和尾随序列(Trailer region)等顺式作用元件(Cis-acting elements)的微型基因组质粒p SC11-b PIV3-EGFP,鉴定正确后,采用2种不同方法拯救BPIV3微型基因组,并通过观察荧光表达情况判断是否拯救成功。【结果】成功构建了基于T7启动子表达系统的BPIV3微型基因组,并实现了拯救。【结论】该系统的成功构建,有助于今后对BPIV3开展基因修饰研究。     

利用反向遗传操作技术产生ZJI株鹅源新城疫病毒

利用反向遗传操作技术,将ZJI株鹅源新城疫病毒全基因组cNDA克隆(NDV3GM122)和含该毒株NP、P及L基因的3个表达载体(pCI-NP、pCI-P与pCI-L)共转染BSR-T7/5细胞;同时,将NDV3GM122与含新城疫病毒La Sota毒株NP、P及L基因的3个表达载体(pCIneoNP、pCIneoP与pCIneoL)进行共转染。通过间接免疫荧光实验(Indiectimmunofluorescence assay,IFA)以及接种鸡胚后进行血凝(Hemagglutinin,HA)与血凝抑制(Hemagglutinininhibition,HI)试验、RT-PCR扩增和电镜观察,结果均证实全基因组cDNA克隆NDV3GM122与La Sota毒株表达载体共转染组产生了有血凝性的鹅源新城疫病毒,而NDV3GM122与ZJI株表达载体共转染组暂未检测到有血凝性的病毒。ZJI株鹅源新城疫病毒的拯救成功为对该病毒进行功能基因组研究和疫苗的研制等后续工作打下了基础。     

狂犬病毒街毒株全长基因cDNA克隆的构建及鉴定

利用分子克隆的方法,将狂犬病毒街毒株的全基因组分为4个片段按照它们基因组上的顺序克隆到真核表达载体pVAX1上,并将G-L间隔区的非编码区替换为表达绿色荧光蛋白(GFP)的核苷酸,构建出表达绿色荧光蛋白(GFP)的重组狂犬病毒HN10株全长基因组cDNA真核表达质粒,同时,在全长cDNA的两侧嵌入锤头状核酶(HamRz)和丁型肝炎病毒核酶(HdvRz)的序列,并置于CMV启动子的控制下,为下一步拯救出该嵌合病毒提供了可直接使用的全长cDNA真核表达质粒。     

CMV与T7启动子对仙台病毒微小基因组拯救效率的比较

构建一种以分泌型荧光素酶基因(Gluc)作为报告基因的仙台病毒BB1株微小基因组质粒,比较了CMV启动子与T7启动子对仙台病毒微小基因组的拯救效率。首先设计并合成锤头状核酶序列,仙台病毒trailer、L基因非编码区、N基因非编码区和leader序列以及丁型肝炎病毒核酶序列,插入含有CMV和T7双启动子的质粒pVAX1中,获得仙台微小基因组的通用型载体pVAX-miniSeV。将Gluc基因插入pVAX-miniSeV中,分别获得正向插入的仙台病毒微小基因组载体pVAX-miniSeV-Gluc(+)和反向插入的pVAX-miniSeV-Gluc(-)。用pVAX-miniSeV-Gluc(+)转染BHK21细胞能在上清中检测到高水平的Gluc活性,表明其中的CMV启动子具有正常转录功能。将pVAX-miniSeVGluc(-)和仙台病毒N、P、L蛋白表达质粒共转染BSR T7/5细胞(稳定表达T7RNA聚合酶的BHK-21细胞)检测到Gluc的高效表达,表明pVAX-miniSeV-Gluc(-)能够被有效拯救;但在BHK-21细胞中却未检测到Gluc的有效表达,提示该载体中的CMV启动子对仙台病毒微小基因组的拯救效率可能没有明显作用。为了进一步了解CMV与T7启动子各自对于仙台病毒微小基因组拯救的作用,本研究又构建了单独含有CMV或T7启动子的仙台病毒微小基因组载体pCMV-miniSeV-Gluc(-)和pT7-miniSeV-Gluc(-)。将这两种载体和仙台病毒N、P、L蛋白表达质粒分别共转染BSR T7/5细胞,结果pT7-miniSeV-Gluc(-)共转染组检测到了Gluc的高效表达,而pCMV-miniSeV-Gluc(-)共转染组未检测到,证实了通用型载体pVAX-miniSeV中仅T7启动子对仙台病毒微小基因组的拯救起了关键作用,而CMV启动子作用不明显。本研究成功构建了一种通用型双启动子仙台病毒微小基因组载体pVAX-miniSeV,并证明了T7启动子系统对仙台病毒微小基因组拯救的关键作用。本研究为下一步构建仙台病毒全基因感染性克隆打下了基础。     

犬瘟热病毒小熊猫株反向遗传系统的构建及其鉴定

以驯化致弱的犬瘟热病毒小熊猫株(Canine distemper virus,CDV)为模板,构建犬痘热病毒感染性cDNA克隆.对其全基因组序列测定后,用RT-PCR的方法获得组成全长基因的7个片段,通过酶切、拼接将7段CDVcDNA序列插入到真核表达载体pCI的MCS上,构建犬瘟热病毒小熊猫株的全长cDNA质粒(pCI-CDV-LP),同时分别克隆CDV小熊猫株N、P、L蛋白ORF构建三个辅助质粒.酶切鉴定和序列测定表明,pCI载体中插入的核酶及CDV cDNA序列正确无误,使用转染试剂Lipofectamine TM 2000将全长质粒和三个辅助质粒共转染中国仓鼠肾细胞(BSR),经RT-PCR、间接免疫荧光和病毒感染VERO-SLAM细胞试验鉴定,成功拯救出CDV小熊猫株,显示CDV小熊猫株反向遗传系统构建完成,为犬瘟热病毒致病机理及免疫研究奠定基础.     

鹅源新城疫病毒NP、P和L基因的克隆与P基因的表达鉴定

将鹅源新城疫病毒的NP、P和L基因通过RT-PCR方法从尿囊液中扩增后分别克隆进pGEM—T easy载体,再分别亚克隆到真核表达载体pCI—neo上,通过酶切、PCR和测序验证克隆正确。利用P基因开放性阅读框(ORF)上靠近终止密码上游的AgeI位点,将报告基因绿色荧光蛋白(GFP)基因克隆进P基因真核表达重组质粒,分别转染COS-1细胞和CEF细胞,在倒置荧光显微镜下可见到绿色荧光,表明GFP基因已得到表达,由此证明P基因也已得到表达。鹅源新城疫病毒NP、P和L基因的克隆成功,为即将进行的鹅源新城疫病毒的反向遗传操作以及功能基因组研究打下基础。     

鸡传染性法氏囊病病毒Gt株VP5基因缺失株感染性克隆的构建

传染性法氏囊病病毒 (IBDV)是双链,双节段RNA病毒,其基因组由A、B两个节段组成,编码结构蛋白VP1-VP4和非结构蛋白VP5。【目的】利用反向遗传操作构建拯救VP5基因缺失重组IBDV。【方法】利用体外定点突变技术,缺失IBDV Gt株VP5基因,通过多重PCR在基因组两端分别引入锤头状核酶序列(HamRz)和丁肝病毒核酶序列(HdvRz)。将带有核酶序列的IBDV基因组插入载体pCAGG的b肌动蛋白启动子下游,构建了IBDV感染性克隆pCAGGmGtA △VP5HRT,将该感染性克隆与pCAGGmGtBHRT共转染DFⅠ细胞。【结果】RT-PCR和间接免疫荧光均显示获得重组病毒,将其命名为rmGtA △VP5。IBDV VP5基因缺失感染性克隆的成功构建为从分子水平上深入研究vp5基因功能奠定了基础。     

Highly efficient rescue of dengue virus using a co-culture system with mosquito/mammalian cells

The production rate of dengue viruses (DENVs), especially low-passage virus isolates, is low, and, therefore, the isolates are generally used only after several passages. However, in vitro passages could induce mutation(s). In this study, we established a system for the characterization of low-passage viral isolates using an infectious cDNA clone. We used R05-624, a plaque derived from type 2 (DENV-2) Thai strain, for the construction of the cDNA clone, named pmMW/R05-624. We found that transfection of both of mammalian Vero cells and mosquito C6/36 cells with viral RNA derived from the cDNA clone produced a significant amount of progeny virus: 3.2 × 10⁶ focus-forming units (FFU) production per ml of cultured fluid only 3 days after transfection with 2 μg RNA. Conversely, no detectable level of viruses was produced by conventional methods using a single cell line, Vero or C6/36. When this system was applied for the characterization of eight low-passage clinical viral isolates by placing their 5′-half or 3′-half in the above cDNA clone, we found that all the isolates, except for L04-225, produced similar levels of progeny virus. Among a total of eight cDNA clones reconstructed with the NS4A-3′NCR region derived from L04-225, one clone carried an insertion and produced a low level of progeny virus. Thus, our system to efficiently rescue clinical samples or low-passage viral isolates could be useful for assessing the virological and molecular characteristics of DENV that could be related to disease pathogenesis.     

Evolutionary rescue and the limits of adaptation

Populations subject to severe stress may be rescued by natural selection, but its operation is restricted by ecological and genetic constraints. The cost of natural selection expresses the limited capacity of a population to sustain the load of mortality or sterility required for effective selection. Genostasis expresses the lack of variation that prevents many populations from adapting to stress. While the role of relative fitness in adaptation is well understood, evolutionary rescue emphasizes the need to recognize explicitly the importance of absolute fitness. Permanent adaptation requires a range of genetic variation in absolute fitness that is broad enough to provide a few extreme types capable of sustained growth under a stress that would cause extinction if they were not present. This principle implies that population size is an important determinant of rescue. The overall number of individuals exposed to selection will be greater when the population declines gradually under a constant stress, or is progressively challenged by gradually increasing stress. In gradually deteriorating environments, survival at lethal stress may be procured by prior adaptation to sublethal stress through genetic correlation. Neither the standing genetic variation of small populations nor the mutation supply of large populations, however, may be sufficient to provide evolutionary rescue for most populations.     

Evolutionary rescue can be impeded by temporary environmental amelioration

Rapid evolutionary adaptation has the potential to rescue from extinction populations experiencing environmental changes. Little is known, however, about the impact of short‐term environmental fluctuations during long‐term environmental deterioration, an intrinsic property of realistic environmental changes. Temporary environmental amelioration arising from such fluctuations could either facilitate evolutionary rescue by allowing population recovery (a positive demographic effect) or impede it by relaxing selection for beneficial mutations required for future survival (a negative population genetic effect). We address this uncertainty in an experiment with populations of a bacteriophage virus that evolved under deteriorating conditions (gradually increasing temperature). Periodic environmental amelioration (short periods of reduced temperature) caused demographic recovery during the early phase of the experiment, but ultimately reduced the frequency of evolutionary rescue. These experimental results suggest that environmental fluctuations could reduce the potential of evolutionary rescue.     

无核白葡萄胚挽救育种技术研究

无核白葡萄在授粉后20－50d,将胚珠接种在含不同激素的Nitsch培养基上,培养80－90d后转入胚荫发培养基中,待胚萌发20d左右,再转入成苗培养基中使其发育成正常幼苗。结果表明,胚萌发适宜的培养基是附加0．5mg/L IAA,1.5mg/L BA和0.5mg/LGA3的Nitsh培养基,在所试10个接种时期中,无授粉后39d胚的发育率最高。     

姜花属种间杂交胚拯救研究

为提高姜花属种间杂交胚挽救中幼胚萌发率,以白姜花×金姜花的胚珠为试材,研究不同胚珠发育时期、不同培养基及低温处理果实对幼胚萌发率的影响.结果表明,白姜花×金姜花胚挽救的适宜培养基是MS+0.1 mg/L BA十0.1 mg/L NAA;接种时期以60 d的幼胚培养效果最佳;低温处理果实3～6 d能有效提高幼胚的萌发率.     

When does gene flow facilitate evolutionary rescue?

Experimental and theoretical studies have highlighted the impact of gene flow on the probability of evolutionary rescue in structured habitats. Mathematical modeling and simulations of evolutionary rescue in spatially or otherwise structured populations showed that intermediate migration rates can often maximize the probability of rescue in gradually or abruptly deteriorating habitats. These theoretical results corroborate the positive effect of gene flow on evolutionary rescue that has been identified in experimental yeast populations. The observations that gene flow can facilitate adaptation are in seeming conflict with traditional population genetics results that show that gene flow usually hampers (local) adaptation. Identifying conditions for when gene flow facilitates survival chances of populations rather than reducing them remains a key unresolved theoretical question. We here present a simple analytically tractable model for evolutionary rescue in a two-deme model with gene flow. Our main result is a simple condition for when migration facilitates evolutionary rescue, as opposed as no migration. We further investigate the roles of asymmetries in gene flow and/or carrying capacities, and the effects of density regulation and local growth rates on evolutionary rescue.     

葡萄胚挽救苗移栽技术的研究

以欧洲葡萄无核品种与中国野生葡萄杂交的胚挽救苗为试材,系统地研究了移栽时期、胚挽救苗质量、移栽方法及移栽基质对葡萄胚挽救苗移栽成活率的影响。结果表明,春季选择壮苗,先无菌条件下移栽到珍珠岩中进行培养室炼苗,再经温室炼苗,移栽成活率最高,可达98．8％。初步探索出一套简单易行、实用高效的葡萄胚挽救苗优化配套移栽技术。     

Locus-dependent profiles of the rescue of nonexcitable behavioral mutants during conjugation in Tetrahymena thermophila

The Tetrahymena nonreversal (TNR) mutants of Tetrahymena thermophila are behavioral mutants with nonexcitable membranes. When cells of the tnrB mutant were mated with wild type, a phenotypic change occurred about l h after pair formation. The pairs began to lose their heterotypic character in stimulation solution containing high potassium and, within 1 1/2h, they were not distinguishable from the wild-type homotypic pairs. On the contrary, although pairs of the tnrA and wild type also lost their heterotypic character about 1 1/2 h after pair formation, they never showed a full response as wild-type homotypic pairs. When tnrA was mated with tnrB more than 50% of pairs expressed a heterotypic pair character 2 h after pair formation, consistent with the tnrB defect having been rescued but not the tnrA defect. Thus, conjugation rescue of the mutant phenotype is locus dependent and probably reflects the nature of the gene products controlling voltage-dependent Ca²⁺ channels. © 1992 Wiley-Liss, Inc.     

Isolation of transgenic progeny of maize by embryo rescue under selective conditions

Summary Fertile transgenic maize plants (T₀) and progeny (T₁) were obtained using microprojectile bombardment and callus selection on hygromycin B. To quickly identify progeny expressing the transgene, embryos from T3 generation kernels were excised 20 days after pollination and exposed to different concentrations of hygromycin B. Surviving and non-surviving embryos were assayed for the presence of the hygromycin phosphotransferase (aphIV) gene using polymerase chain reaction. Embryos that germinated and survived on 25, 50, or 100 mg/liter hygromycin possessed theaphIV gene. Embryos that did not germinate lacked the gene. Progeny surviving selection were transferred to the greenhouse and tested for expression of the gene using a leaf disc assay. The results demonstrated that the gene construct was expressed in both embryo and leaf tissue and that selection during germination successfully eliminated progeny lacking the gene of interest. This method is also useful for rapid-cycling of maize generations.