Tree population dynamics in Kibale National Park, Uganda 1975–1998

Changes in species composition, stem abundance, and basal area of trees taller than or equal to 10 m in a medium altitude tropical rain forest at the Ngogo study area, Kibale National Park, Uganda are described for the period between 1975 and 1998 ( n  = 23 years). Two enumeration episodes were conducted in 263 plots of 5 m by 50 m during 1975–80 and 1997–98. During this period, species richness decreased by 3% (from 92 to 89). Species diversity (H') also declined slightly from 2.97 to 2.86. The number of trees recorded in the sample plots decreased by 8% (from 2545 to 2329), while basal area decreased from 49.48 m² ha⁻¹ to 48.68 m² ha^−1. However, stem abundance and basal area increased for some species.     

Relationship between seed and clonal growth in the reproduction of Carex rugulosa Kük. in riverside meadows

Carex rugulosa Kük. develops riverside vegetation in brackish marshes along the lower parts of rivers. Because the rhizomatous ramets grow densely (590–950/m²) in its developed population, it is expected that seedlings cannot get enough light to grow if seeds germinate in crowded ramets. We studied the reproductive contribution of seed in a marshy meadow of the Ohashi River, Japan. The number of seeds produced was 6900–14 200/m² in 2002. The number of buried seeds in the following germination season differed among sites from 1190 to 2690/m². No seedlings were observed at plots where the ramets from rhizomes grew densely. In contrast, seedlings appeared in plots where all rhizomatous ramets were artificially cut. The number of seedlings corresponded to 17.5–39.5% of that of buried seeds. All these seedlings were submerged and died when it rained heavily. In the genotype analysis using allozyme detection, one of the phosphoglucoisomerase loci ( Pgi-2 ) indicated a pair of alleles. Among eight plots (each plot was 50 or 60-cm square), four showed an excess of heterozygotes and two showed homozygote domination in the Pgi-2 genotype. These results suggest that: (i) seed germination is suppressed in crowded ramets; (ii) seedling survival is severely reduced by inundation; and (iii) the population is usually maintained by clonal growth. As germination is induced in open areas, it is hypothesized that the main role of seed is recovery after vegetation decline caused by environmental stresses or colonization to other areas without dense vegetation.     

Attempts to control cabbage root flies Delia radicum L. and Delia floralis (Fall.) (Dipt., Anthomyiidae) with entomopathogenic fungi: laboratory and greenhouse tests

One laboratory and three greenhouse experiments were conducted to study the pathogenicity and efficacy of Finnish isolates of entomopathogenic hyphemycetous fungi against cabbage root flies. In Petri dishes, exposure to 1.5 × 10¹⁰ spores of Metarhizium anisopliae per dish caused 40–50% mortality of undifferentiated second- and third-stage larvae of Delia floralis , and 1 × 10⁷ spores per dish caused 40–50% mortality of Delia radicum larvae. In one greenhouse test, 1 × 10⁸ and 1 × 10⁹ spores of M. anisopliae and Paecilomyces fumosoroseus reduced the root damage of head cabbage by 20–70% compared with untreated controls, although this was not accompanied by significant reductions in the number of pupae. Only M. anisopliae consistently grew out of larvae and pupae of D. floralis during incubation that followed their recovery from the soil at the end of an experiment testing different formulations of M. anisopliae and Beauveria bassiana , but the frequency of the latent infections of the pest by M. anisopliae was not associated with reduced severity of damage to seedlings of head cabbage.     

Floristic composition, structure, and dynamics of an upper montane rain forest in Southern Ecuador

Two 1 ha plots of undisturbed upper montane rain forest in southern Ecuador were sampled for all trees with a dbh ≥ 5 cm. An extraordinarily high α-diversity for a forest near treeline is described. The "non-ridge forest" plot at 2900 m elevation has 75 species and 28 families ha^-1 and is believed to represent an advanced stage of succession whereas, the "ridge forest" plot at 2700 m elevation with 90 species and 38 families ha^-1 has a more rapid turn-over rate probably due to a more unstable environment. Downslope forces (soil creep) are discussed as a possible cause for 32–44% of all trees being inclined more than 30° in the moderately steep terrain (average slope 20° in both study plots). The plot of "non-ridge forest" is characterized by a much greater biomass whether expressed as basal area (44 m² versus 15 m²) or stem volume (214 m³ versus 52 m³), while the density is equally high (2310 versus 2090 trees ha^-1) in both plots. Families with Family Importance Value >25 / ha^-1 are Clusiaceae, Cunoniaceae, Melastomataceae, Myrsinaceae, and Ternstroemiaceae.     

Production of amylase by the intestinal microflora in cultured freshwater fish

The amylase-producing ability of the intestinal microflora in cultured specimens of ayu, carp, channel catfish, Japanese eel and tilapia was determined. Mean viable counts of aerobes and anaerobes ranged from 1·1×10⁶ to 3·7×10⁸ cfu g⁻¹ and from 1·3×10³ to 1·6×10⁸ cfu g⁻¹, respectively. Aeromonas spp. and Bacteroidaceae were predominant in four to five fish species. Of 206 strains examined, 65 (31·6%) produced ≥0·01 U amylase ml⁻¹. The percentage of producers differed among families and genera of bacteria and fish species. While 56% of the anaerobes produced amylase, only 20% of the aerobes did. More than 50% of Aeromonas , Bacteroidaceae and Clostridium strains produced amylase efficiently while Acinetobacter , coryneforms, Enterobacteriaceae, Moraxella , Plesiomonas and Streptococcus strains did not. High amylase production (≥0·05 U ml⁻¹) was found in 12 strains, 11 from Aeromonas and one Pseudomonas . The percentage of high amylase producers in Japanese eel was lower than the other four fish (2–30%). These results strongly suggest that the amylase produced by the intestinal microflora play an important role in the digestion of starch in freshwater fish to some extent.     

Effects of regulated discharge on burbot migration

Burbot Lota lota movement and river discharge were studied in the Kootenai River, Idaho, U.S.A. and British Columbia, Canada, downstream of Libby Dam, Montana, U.S.A. A total of 24 adult burbot with transmitters were tracked from 1994 to 2000, for analysis of a travel distance of ≥5 km in ≤10 days termed 'stepwise movement'. Of 44 'stepwise movements', significantly greater movements during pre‐spawning and spawning were observed when average daily discharges from Libby Dam were <300 m³ s⁻¹, with a mean of 176 m³ s⁻¹, similar to pre‐dam conditions. Burbot travelled at a greater rate during all seasons (3·36 km day⁻¹) at discharges >300 m³ s⁻¹(mean = 1·84 km day⁻¹) than at discharges >300 m³ s⁻¹ but no difference was found for the pre‐spawning and spawning period. Burbot that started 'stepwise movements' in low discharge conditions frequently stopped during low discharges.     

Seedling recruitment in semi-natural pastures: the effects of disturbance, seed size, phenology and seed bank

We examined recruitment patterns in semi-natural pastures and their relationships to disturbance and species composition at different spatial scales (0.01 m² up to 4 m²) of both the vegetation and the seed bank. Possible associations between seedling recruitment and phenology were also studied. The study was performed in four pastures with different management history. Seedling recruitment was generally enhanced by disturbance, with the greatest effect for small-seeded species that germinate in the autumn. The local species-pool contributed to a large extent to seedling recruitment; 83 % of the recruited species were found in the vegetation, whereas 44 % of the recruited species were found in the seed bank. There were a total of 88 species found in the vegetation at different spatial scales; 61 % were recorded at the smallest spatial scale (0.01 m²). The area sampled at this scale comprised 1.25% of the area examined, indicating a small scale structuring of diversity in the pastures. The species number in the vegetation varied between 7 and 14 for the smallest scale (0.01 m²), and between 23 and 42 for the largest scale (4 m²), in the four pastures. The species number in the seed bank was less variable. Like most studies of perennial grasslands, we found no close correspondence between species distribution in the vegetation and in the seed bank. Two of the pastures had a joint management history and exhibited a close similarity of species in the seed bank, despite that one of the pastures was abandoned already in the beginning of this century.     

Demography of Bouteloua gracilis in a mixed prairie: analysis of genets and individuals

1 We analysed a data set containing the locations and sizes of individual plants from five 1-m² permanent quadrats that had been mapped annually from 1934 to 1972. We digitized each map and used geographical information software to evaluate annual recruitment and mortality, age structure, survivorship and longevity of genets and individuals of Bouteloua gracilis .
2 Ninety-one per cent of the years between 1938 and 1972 had at least one seedling recruited. An average of 10.3 genets died annually, although the variability among years was high (CV = 70%). The number of seedlings recruited each year was significantly correlated with the number of genets dying. Most genets died before age 10 and the average life span was 3.7 years, although some genets were much longer lived (> 38 years).
3 The average number of individuals per genet was 1.3. Excluding seedlings, 56% of the genets were represented by a single individual. The annual number of individuals in the 5 m² ranged from 29 to 278. Average mortality of individuals was 25.8 per year and the variability among years was high (CV = 91%).
4 The plant community appeared to be relatively stable and openings created by mortality were recolonized by recruitment. Climatic variability did not have a large influence on demography.     

First direct landscape-scale measurement of tropical rain forest Leaf Area Index, a key driver of global primary productivity

Leaf Area Index (leaf area per unit ground area, LAI) is a key driver of forest productivity but has never previously been measured directly at the landscape scale in tropical rain forest (TRF). We used a modular tower and stratified random sampling to harvest all foliage from forest floor to canopy top in 55 vertical transects (4.6 m²) across 500 ha of old growth in Costa Rica. Landscape LAI was 6.00 ± 0.32 SEM. Trees, palms and lianas accounted for 89% of the total, and trees and lianas were 95% of the upper canopy. All vertical transects were organized into quantitatively defined strata, partially resolving the long-standing controversy over canopy stratification in TRF. Total LAI was strongly correlated with forest height up to 21 m, while the number of canopy strata increased with forest height across the full height range. These data are a benchmark for understanding the structure and functional composition of TRF canopies at landscape scales, and also provide insights for improving ecosystem models and remote sensing validation.     

River flow and fish abundance in a South African estuary

The ichthyofauna of the Thukela Estuary, a small (55 ha), shallow (<1·5 m) system on the KwaZulu-Natal coast (mean annual river runoff of 3865 × 10⁶ m³, from a large catchment of 29 000 km², is seasonal: peak inputs occurring between November and March), was dominated by the juveniles of marine taxa that used the estuary as a nursery area. A striking feature of the above community was the decline in fish abundance with increasing river input, with flow values >100 m³ s⁻¹ leading to increased loss of species from the system. This decline was linked to the lack of saline intrusion into the estuary and increased freshwater flooding through the system.     

Relative abundance and growth of mussels (Mollusca: Eulamellibranchia) in pools 8,9 and 10 of the Mississippi River

SUMMARY. Twenty-three species of unionid mussels were sampled during the summer of 1975 from a 76-mile reach of the Upper Mississippi River; this represented eight species fewer than were recorded in a 1930–31 survey for the same section of the river. Of the 244 sites sampled in 1975, mussels were found at 116 sites and the ten most productive sites accounted for 40.8% of the 1205 mussels collected. There were as many as thirteen different mussel species taken from one sampling site. The two most abundant species ( Amblema peruviana and Megalonaias gigantea ) constituted 54.5% of the mussels sampled in 1975; these two species made up only 8.3% of the 1930–31 survey. Individuals of the twelve most abundant mussel species were aged, and shell-length growth equations were determined. In addition, shell-free dry weight growth rate and shell weight growth rate was determined for Amblema peruviana . The calculated annual production for A. peruviana (assuming a mean density of 1 per m²) was 482 mg/m² shell-free dry weight, and 14.471 g/m² shell weight.     

Swimming activity of seabass: comparing patterns obtained in natural environment and in re-circulating tanks under high density

Seabass ( Dicentrarchus labrax ) swimming activity was compared between natural environments and aquaculture facilities. Behaviour under natural conditions was assessed in a saltmarsh pond (250 m², 18 × 14 × 0·8 m) using acoustic telemetry. From several surveys, we documented the diel activity rhythm and demonstrated group effects on swimming patterns and amplitudes by comparing activity of solitary fish with that of a fish living in a group of 60. Consequences of weather variability were also analysed and revealed a high sensitivity of fish to atmospheric conditions for both swimming and demand‐feeding behaviour. Behaviour in fish tanks was also studied using acoustic telemetry, as part of the EUREKA EU1 960 'Aqua‐Maki 2' project investigating aspects of fish culture in re-circulating tanks under high density. A re-circulating hexagonal tank (5·4 × 5·4 m, 1·8 m depth, 48 m³) was equipped with positioning and demand‐feeding systems, oxygen and temperature probes. Initial density was 50 kg m³ in March and rose to 90 kg m³ at the end of the experiment in May. During this period, the movements of nine fish were continuously recorded for 24 h each, reaching a total of six 24 h episode at eight days interval. Swimming activity was analysed in terms of activity rhythms and space occupation specially around feeding events. The two data set and main results will be presented and compared to assess seabass behavioural plasticity and sensitivity to husbandry conditions.     

Predicting the distribution of the invasive alien Heracleum mantegazzianum at two different spatial scales

Modelling the distribution of invasive alien species is widely used for predicting future dispersal, response to climate change, and effects of management, but little information is available on the scale dependence of spatial models. This study is focused on Heracleum mantegazzianum , a problematic invasive plant in central and north-western Europe. The main objective was to model the current distribution of this species at national (43,000 km²) and regional scale (4900 km²) using autologistic regression with a Danish data set. Presence–absence data were used in a grid system with 5 × 5 km² or 2 × 2 km² as basic units. To avoid misleading presence–absence models and unreliable probability values due to unbalanced data, the prevalence was used as cut-off value, and a favourability function was applied to the model predictions. The national model showed a widespread distribution of H. mantegazzianum with highest habitat suitability in the eastern and northern parts of the country where human population density is high, winters more severe and/or loamy soils more common. At a regional scale the distribution of H. mantegazzianum is associated with alluvial sand cover, high human population density, spring precipitation, and presence of the species in neighbour grid units. The observed widespread national distribution is likely the result of anthropogenic spread of this ornamental plant, while the locally clumped distribution suggests that H. mantegazzianum naturally spreads mainly over short distances. The current distribution in Denmark resembles an intermediate invasion stage where long-distance dispersal is less important, while spread from suitable neighbour habitats is significant. The study demonstrates that the favourability function leads to improved mapping standards for invasive species.     

Production of amylase by the intestinal bacteria of Japanese coastal animals

H. SUGITA, J. KAWASAKI, J. KUMAZAWA AND Y. DEGUCHI. 1996. The amylase-producing ability of intestinal bacteria in one marine crab and seven fish species was determined. Mean total viable counts ranged from 1.3 × 10⁵ to 1.5 × 10⁸ cfu g⁻¹, and Vibrionaceae were predominant in all specimens. Of 1585 strains examined, 341 (21.5%) produced ≥0.01 U amylase ml⁻¹. Percentage of producers (≥0.01 U ml⁻¹) differed among genera/families. High abilities (≥0.05 U ml⁻¹) were found in 1.4-3.6% of Enterobacteriaceae, Pseudomonas and Vibrionaceae strains. On the other hand, percentage of producers varied with animal species. These results reveal that the amylase producers were widely distributed in the digestive tracts of coastal animals including crabs and fish, irrespective of their food habitats.     

A 10‐year decrease in plant species richness on a neotropical inselberg: detrimental effects of global warming?

The census of vascular plants across a 10-year interval (1995–2005) at the fringe of a neotropical rainforest (Nouragues inselberg, French Guiana, South America) revealed that species richness decreased, both at quadrat scale (2 m²) and at the scale of the inselberg (three transects, embracing the whole variation in community composition). Juvenile stages of all tree and shrub species were most severely affected, without any discrimination between life and growth forms, fruit and dispersion types, or seed sizes. Species turnover in time resulted in a net loss of biodiversity, which was inversely related to species occurrence. The most probable cause of the observed species disappearance is global warming, which severely affected northern South America during the last 50 years (+2 °C), with a concomitant increase in the occurrence of aridity.     

Effects of Irradiance and Temperature on the Photosynthesis and Vegetative Propagation of Caulerpa serrulata

The photosynthetic oxygen evolution of Caulerpa serrulata was determined with oxygen electrodes. The effects of light and temperature on the growth and regeneration of fragmented C. serrulata thalli were analyzed. The regenerating rate and establishment of different sizes and portions of C. serrulata were studied. The results showed that the light saturation point of C. serrulata was 200 μmol photons/m2 per s and the optimum growth temperature was 25-30℃. Under these conditions, the maximum photosynthetic oxygen evolution rate was 15.1:±0.29 mg O2/mg Chl a/h, the growth rate and elongation rate reached the highest values, 4.67±0.09 mg FW/d and 0.78±0.01 mm/d, respectively. The fragmented C. serrulata thalli was regenerated at 20-35℃ and survived at 15℃ and 200 μmnol photons/m2 per s. A different survival rate was detected according to fragment size. All of these results indicated that C. serrulata was a candidate to become an invasive species if introduced into a new place. Therefore, we should pay more attention to C. serrulata for its potential threat to marine ecosystem when it is sold for aquarium use.     

Automated concentration and recovery of micro-organisms from drinking water using dead-end ultrafiltration

Aims:  Concentration of pathogens diluted in large volumes of water is necessary for their detection. An automated concentration system placed online in drinking water distribution systems would facilitate detection and mitigate the risk to public health.
Methods and Results:  A prototype concentrator based on dead-end hollow fibre ultrafiltration was used to concentrate Bacillus atrophaeus spores directly from tap water. Backflush was used to recover accumulated particulates for analysis. In field tests conducted on a water utility distribution system, 3·2 × 10⁴–1·4 × 10⁶ CFU ml⁻¹ (6·1 × 10⁶–3·0 × 10⁸ CFU) were recovered from the filter when 2·9 × 10⁷–1·0 × 10⁹ CFU were spiked into the system. Per cent recovery ranged from 21% to 68% for flow volumes of 15–21 l. Tests using spore influent levels <10 CFU l⁻¹ (spike < 1000 CFU) yielded 23–40% recovery for volumes >100 l.
Conclusions:  B. atrophaeus spores at levels <10 CFU l⁻¹ were concentrated directly from tap water using an automated dead-end hollow-fibre ultrafiltration system.
Significance and Impact of the Study:  The prototype concentrator represents a critical step towards an autonomous system that could be installed in drinking water distribution lines or other critical water lines to facilitate monitoring. Recovered samples can be analysed using standard or rapid biosensor methods.     

Composition and structure of a species rich Amazonian rain forest obtained by two different sample methods

Inventory data for trees ≥ 10 cm DBH from a hectare plot are compared to data obtained by the Point-Centered Quarter Method along a line transect from the same locality in Anangu, Amazonian Ecuador. The one-hectare quadrat plot of 100 × 100 m had 734 individuals, 153 species, 46 families, a total basal area of 22.2 m², and an estimated above ground tree volume of 240.5 m³. The line transect had a calculated density of 728 individuals per hectare, which included 239 species, 51 families, a total basal area of 34.1 m², and an estimated above ground tree volume of 409.6 m³. Of the 20 species with the highest IVI, only four were shared by the two samples. The most important species were Quararibea ochrocalyx on the hectare plot and Iriartea deltoidea on the line transect, constituting 26.6 and 13.3% of the individuals, respectively. The five families with the highest FIV on the hectare plot (Bombacaceae, Arecaceae, Moraceae, Caesalpinaceae, and Lauraceae) and on the line transect (Arecaceae, Moraceae, Meliaceae, Mimosaceae and Caesalpinaceae) constitute 40.4% and 35.4% of the Family Importance Values of the samples, respectively. The Point-Centered Quarter Method used along a line transect reflects maximum diversity and provides average values of density and tree size in the area. The quadrat plot reflects the local structure and composition of the forest within the plot.     

Source of cell injected is a critical factors for short and long engraftment in xeno-transplantation

Abstract. This study aims to investigate engraftment of human cord blood and foetal bone marrow stem cells after in utero transplantation via the intracoelomic route in the sheep. Here, we performed transplantation in 14 single and 1 twin sheep foetuses at 40–47 days of development, using a novel schedule for injection. (i) Single injection of CD34⁺ human cord blood stem cells via the coelomic route (from 10 to 50 × 10⁴) in seven single foetuses. (ii) Single injection of CD34⁺ foetal bone marrow stem cells via the intracoelomic route with further numbers of cells (20 × 10⁵ and 8 × 10⁵, respectively) in three single and in one twin foetuses. (iii) Double fractioned injection (20–30 × 10⁶) via the coelomic route and 20 × 10⁶ postnatally, intravenously, shortly after birth of CD3-depleted cord blood stem cells in four single foetuses. In the first group, three single foetuses showed human/sheep chimaerism at 1, 8 and 14 months after birth. In the second group, the twin foetuses showed human/sheep chimaerism at 1 month after birth. In the third group, only two out of four single foetuses that underwent transplantation showed chimaerism at 1 month. While foetal bone marrow stem cells showed good short-term engraftment (1 month after birth), cord blood stem cells were able to persist longer in the ovine recipients (at 1, 8 and 14 months after birth).     

海南尖峰岭热带山地雨林不同空间尺度和径级水平的物种丰富度与个体密度关联

以海南尖峰岭热带山地雨林为研究对象, 基于尖峰岭原始林60 hm²大样地, 分析了7个不同空间尺度(5 m × 5 m、10 m × 10 m、20 m × 20 m、40 m × 40 m、60 m × 60 m、80 m × 80 m、100 m × 100 m)、3个不同径级(胸径(DBH) ≥ 1.0 cm、DBH ≥ 2.5 cm、DBH ≥ 7.5 cm)物种丰富度与个体密度之间的关联性, 以期为负密度制约效应等研究的尺度选择提供参考依据。研究结果表明, 物种丰富度和个体密度之间的关联性是基于空间尺度存在的, 并受分析植株径级大小的影响。DBH ≥ 1.0 cm时, 在4个空间尺度下(5 m × 5 m、10 m × 10 m、20 m × 20 m、40 m × 40 m), 物种丰富度随个体密度增加而增加, 但物种丰富度和个体密度两者间的相关性随取样空间尺度的增大而逐渐下降; 在其他3个空间尺度下(60 m × 60 m、80 m × 80 m、100 m × 100 m), 两者间没有显著相关性。当DBH ≥ 2.5 cm和DBH ≥ 7.5 cm时, 物种丰富度和个体密度间的相关性随空间尺度变化的趋势也与上述结果基本一致; 在60 m × 60 m的空间尺度上, DBH ≥ 1.0 cm时物种丰富度和个体密度相关性不显著, DBH ≥ 2.5 cm和DBH ≥ 7.5 cm两个径级的物种丰富度和个体密度表现出弱相关性。DBH ≥ 2.5 cm和DBH ≥ 7.5 cm时, 各空间尺度下物种丰富度和个体密度之间的决定系数几乎一致, 但高于DBH ≥ 1.0 cm时两者之间的决定系数, 说明大径级植株的个体密度和物种丰富度之间有更强的关联性, 负密度制约效应和自疏效应可能是产生这种现象的主要原因。