Coexistence of competing juvenile–adult structured populations

The Leslie-Gower model is a discrete time analog of the competition Lotka–Volterra model and is known to possess the same dynamic scenarios of that famous model. The Leslie–Gower model played a historically significant role in the history of competition theory in its application to classic laboratory experiments of two competing species of flour beetles (carried out by Park in the 1940s–1960s). While these experiments generally supported what became the Competitive Exclusion Principle, Park observed an anomalous coexistence case. Recent literature has discussed Park’s ‘coexistence case’ by means of non-Lotka–Volterra, non-equilibrium dynamics that occur in a high dimensional model with life cycle stages. We study this dynamic possibility in the lowest possible dimension, that is to say, by means of a model involving only two species each with two life cycle stages. We do this by extending the Leslie–Gower model so as to describe the competitive interaction of two species with juvenile and adult classes. We give a complete account of the global dynamics of the resulting model and show that it allows for non-equilibrium competitive coexistence as competition coefficients are increased. We also show that this phenomenon occurs in a general class of models for competing populations structured by juvenile and adult life cycle stages.     

Can water mites control populations of planktonic Cladocera?

Predatory pelagic water mites, Piona sp., in a small subtropical lake of Argentina showed rapid numerical response and protection from fish consumption. In experiments, predation rates of Piona on cladocerans equalled those of the principle lake planktivore, Moenkhausia intermedia Eigenmann (about 100 prey · predator^–1 day^–1). As a result, the mites caused a summer depression in the dominant lake zooplankter, Daphnia laevis Birge, evidenced by the analysis of its population dynamics and simple modelling.     

Does colour polymorphism enhance survival of prey populations?

That colour polymorphism may protect prey populations from predation is an old but rarely tested hypothesis. We examine whether colour polymorphic populations of prey exposed to avian predators in an ecologically valid visual context were exposed to increased extinction risk compared with monomorphic populations. We made 2976 artificial pastry prey, resembling Lepidoptera larvae, in four different colours and presented them in 124 monomorphic and 124 tetramorphic populations on tree trunks and branches such that they would be exposed to predation by free-living birds, and monitored their ‘survival’. Among monomorphic populations, there was a significant effect of prey coloration on survival, confirming that coloration influenced susceptibility to visually oriented predators. Survival of polymorphic populations was inferior to that of monomorphic green populations, but did not differ significantly from monomorphic brown, yellow or red populations. Differences in survival within polymorphic populations paralleled those seen among monomorphic populations; the red morph most frequently went extinct first and the green morph most frequently survived the longest. Our findings do not support the traditional protective polymorphism hypothesis and are in conflict with those of earlier studies. As a possible explanation to our findings, we offer a competing ‘giveaway cue’ hypothesis: that polymorphic populations may include one morph that attracts the attention of predators and that polymorphic populations therefore may suffer increased predation compared with some monomorphic populations.     

Can road mortality limit populations of pool-breeding amphibians?

We integrated road maps, traffic volume data, and pool locations in a modeling study to estimate the potential effects of road mortality on populations of pool-breeding spotted salamanders (Ambystoma maculatum Shaw). Population projections based on spotted salamander life tables imply that an annual risk of road mortality for adults of >10% can lead to local population extirpation; mitigation efforts (tunnels, road closures, and other measures) should seek to reduce road mortality rates to below this threshold. For central and western Massachusetts, we estimated that salamanders would be exposed to at least this threshold level of risk at 22–73% of populations (assuming a 100 vs. 500 m migration distance, respectively). We conclude that road mortality can be a significant source of additive mortality for individual spotted salamanders in many parts of the species’ range. Efforts to prevent such mortality by transportation planners are likely warranted strictly on a biological basis in areas with road densities >2.5 km per km² of landscape and traffic volumes >250 vehicles/lane/day within the migration range of a breeding population of spotted salamanders.     

Demography of source—sink populations and the evolution of ecological niches

Summary The demography of populations living in variable environments is an important factor molding the evolution of ecological niches, for it determines the relative strength of selection pressures on adaptations to different habitats. Here I consider a coarse-grained environment consisting of two habitat types and investigate how the selection pressure on reproductive success in different habitats depends on their quality and frequency and the dispersal pattern. The results suggest that selection on adaptations to optimal habitats will usually be stronger than on adaptations to poor habitats and the ecological niche will thus tend to be an evolutionarily conservative character. It is because under the habitat choice or limited dispersal that seem to prevail in natural populations, more individuals encounter the better habitat than would be expected solely on the basis of its relative area. This bias results in reduced selection pressure on reproductive success in the poorer habitat. With habitat choice or limited dispersal, selection pressure on reproductive success in the poorer habitat may exceed that on reproductive success in the better habitat only if the poorer habitat is much more frequent in the environment than the better habitat and the difference in their quality is not large.     

Seed viability in declining populations of Caladenia rigida (Orchidaceae): are small populations doomed?

Despite comparatively good rates of pollination and seed production, some populations of the endangered terrestrial orchid Caladenia rigida continue to decline. To determine whether seed quality may be limiting reproductive potential, we assessed seed viability among declining populations of C.?rigida (in the southern part of its distribution) and among populations that are regarded as stable (in the northern part of its distribution). We also compared differences in seed viability to plant traits, population size and habitat characteristics (soil properties, canopy cover, presence of proximate vegetation). Seed capsules from southern populations were significantly smaller, with only 9% of seeds being viable, compared to 36% in capsules from northern populations. Soil phosphorus concentrations differed between regions, but other habitat characteristics did not correlate with seed viability. Using calculations based on seedling recruitment data from other Caladenia species, we predict that seed output is insufficient to ensure the long-term persistence of the smallest C.?rigida populations.     

Preparation of pure populations of covalently stabilized amyloid β-protein oligomers of specific sizes

Evidence suggests that amyloid β-protein (Aβ) oligomers may be seminal pathogenic agents in Alzheimer's disease (AD). If so, developing oligomer-targeted therapeutics requires an understanding of oligomer structure. This has been difficult due to the instability of these non-covalently associated Aβ assemblies. We previously used rapid, zero-length, in situ chemical cross-linking to stabilize oligomers of Aβ40. These enabled us to isolate pure, stable populations of dimers, trimers, and tetramers and to determine their structure-activity relationships. However, equivalent methods applied to Aβ42 did not produce stable oligomers. We report here that the use of an Aβ42 homologue, [F10, Y42]Aβ42, coupled with sequential denaturation/dissociation and gel electrophoresis procedures, provides the means to produce highly pure, stable populations of oligomers of sizes ranging from dimer through dodecamer that are suitable for structure-activity relationship determination.     

Physiological and mutagenic effects of N-methyl-N′-nitro-N-nitrosoguanidine in populations of chlorococcal algae

The suitability was evaluated of MNNG as a mutagen inducing increased frequencies of mutations in the cell populations of three strains of chlorococcal algae for the purposes of selection. MNNG has proved to be highly toxic to those algae as it produces severe physiological responses of the affected cells. The mutagenic effect of MNNG was relatively small in comparison with the recorded toxic effect. From these results it has been concluded that in reverse to NEU, MNNG can hardly be applied with such good an effect in the mutation breeding of chlorococcal algae that are suitable for mass cultivation.     

Microsatellite analysis of genetic divergence among populations of giant Galápagos tortoises

Giant Galápagos tortoises represent an interesting model for the study of patterns of genetic divergence and adaptive differentiation related to island colonization events. Recent mitochondrial DNA work elucidated the evolutionary history of the species and helped to clarify aspects of nomenclature. We used 10 microsatellite loci to assess levels of genetic divergence among and within island populations. In particular, we described the genetic structure of tortoises on the island of Isabela, where discrimination of different taxa is still subject of debate. Individual island populations were all genetically distinct. The island of Santa Cruz harboured two distinct populations. On Isabela, populations of Volcan Wolf, Darwin and Alcedo were significantly different from each other. On the other hand, Volcan Wolf showed allelic similarity with the island of Santiago. On Southern Isabela, lower genetic divergence was found between Northeast Sierra Negra and Volcan Alcedo, while patterns of gene flow were recorded among tortoises of Cerro Azul and Southeast Sierra Negra. These tortoises have endured heavy exploitation during the last three centuries and recently attracted much concern due to the current number of stochastic and deterministic threats to extant populations. Our study complements previous investigation based on mtDNA diversity and provides further information that may help devising tortoise management plans.     

Do landscape barriers affect functional connectivity of populations of an endangered damselfly?

1. Landscape genetic approaches were used to assess functional connectivity of populations of the endangered damselfly Coenagrion mercuriale in a fragmented agricultural landscape in Switzerland. Spatial genetic clustering methods combined with interpolation by kriging and landscape genetic corridor analysis were applied to identify landscape elements that enhance or hinder dispersal and gene flow. 2. Spatial genetic clustering analysis divided the sampled populations into a northern and a southern genetic group. The boundary between the two groups coincided with a hill ridge intersecting the study area. Landscape corridor analysis identified five landscape elements that significantly affected gene flow. Elevation change, Euclidian distance, patches of forest and flowing waterbodies acted as barriers, whereas open agricultural land enhanced gene flow between populations of C. mercuriale. 3. This study showed that movement of C. mercuriale was not restricted to its preferred habitat (i.e. streams). Populations linked via continuous open agricultural land were functionally well connected if they were not more than about 1.5–2 km apart. In contrast, substantial elevation change and larger forest patches separated populations. These findings may serve as a basis to define conservation units and should be considered when planning connectivity measures, such as determining the locations of stepping stones, or the restoration of streams.     

No benefit of glandular trichome production in natural populations of Datura wrightii?

Populations of Datura wrightii vary in the frequency of plants that produce glandular trichomes, a resistance trait under the control of a single gene. Such variation may be maintained if the production of glandular trichomes is costly in the absence of herbivory, and if selection imposed by herbivore communities varies spatially or temporally. Here, we document costs in the presence of herbivory for established glandular plants relative to established non-glandular plants growing in natural populations from coastal mountain, Riversidian sage scrub, and Mojave desert habitats in southern California. Damage caused by the herbivore community varied spatially, with significant differences in herbivore-specific damage between plants of the two trichome types and among populations within habitats, although not generally among habitats. Plants with greater canopy size and canopy persistence had higher viable seed production than smaller or more damaged plants, but this relationship was statistically significant only for non-glandular plants. However, the relationship between viable seed production and canopy persistence became significant for glandular plants when damage caused by sap suckers, which do not remove leaf area, was pooled with undamaged leaf area. The high cost exhibited by glandular plants leads us to predict that in the absence of any additional, unknown benefits of producing glandular trichomes, the frequency of these plants should decline in all natural populations of D. wrightii. Received: 13 July 1999 / Accepted: 28 September 1999     

Aphid populations showing differential levels of virulence on Capsicum accessions

The green peach aphid,Myzus persicae,is one of the most threatening pests in pepper cultivation and growers would benefit from resistant varietices.Previously,we identified two Capsicum acessions as susceptible and three as resistant to M.persicae using an aphid population originating from the Netherlands(NL).Later on we identified an aphid population originating from a diferent gcographical region(Switserland,SW)that was virulent on all tested Capsicum acessions.The objeetive of the current work is to describe in detail diferent aspects of the interaction between two aphid populations and two sclected Capsicum acessions(one that was susceptible[PB2013046]and one that was resistant[PB2013071]to population NL),including biochemical processes involved.Electrical penetration graph(EPG)recordings showed similar feeding activities for both aphid populations on PB2013046.On acession PB2013071 the aphid population sw was able to devote significantly more time to phloem ingestion than population NL.We also studied plant defense response and found that plants of acession PB2013046 could not induce an accumulation of reactive oxygen species and callose formation after infestation with either aphid population.However,plants of PB2013071 induced a stronger defense response after infestation by population NL than after infestation by population SW.Based on these results,population SW of M.persicae seems to have overcome the resistance of PB2013071 that prevented feeding of aphids from NL population.The potential mechanism by which SW population overcomes the resistance is discussed.     

Collateral relatives of American Indians among the Bronze Age populations of Siberia?

Nonmetric and metric traits were studied in cranial series representing prehistoric and modern populations of America and Siberia. Frequencies of the infraorbital pattern type II (longitudinal infraorbital suture overlaid by the zygomatic bone) are universally lower in Amerindians than in Siberians. The os japonicum posterior trace, too, is much less frequent in America than in Siberia. The only two Siberian groups with an almost Amerindian combination are late third to early second millennium bc populations from Okunev and Sopka, southern Siberia. The multivariate analysis of five nonmetric facial traits and ten facial measurements in 15 cranial series reveals two independent tendencies. One of them shows a contrast between prehistoric Siberian Caucasoids and modern Siberian Mongoloids; the second one sets Amerindians apart from others. Prehistoric people who lived west of Lake Baikal and modern Uralic speakers are intermediate between Siberian Caucasoids and Siberian Mongoloids; Eskimos, Aleuts, and Chukchi are intermediate between Siberian Mongoloids and Amerindians; and Okunev and Sopka are intermediate between Siberian Caucasoids and Amerindians. Our results suggest that people of Okunev and Sopka are collateral relatives of Amerindians with some Caucasoid admixture. Am J Phys Anthropol 108:193–204, 1999. © 1999 Wiley-Liss, Inc.     

The impact of El Niño events on populations of mesopelagic hydromedusae

For over 10 years, the midwater ecology group at MBARI has compiled video and accompanying physical data with the ROV Ventana operating in mesopelagic depths of Monterey Bay, CA in order to elucidate patterns in midwater ecology. Two El Niño events have occurred during this time period, in 1991–92 and in 1997–98. The oceanographic metric of spiciness combines temperature and salinity data into one sensitive measurement. Although temperature and salinity measurements alone revealed no clear patterns, clear signals of spiciness were observed that corresponded to water mass intrusions into the deep waters of the bay during the two El Niño events. During these events, some seldom-seen species were observed in high numbers in the midwater, while historically common species became rare. During non-El Niño years, the leptomedusa Mitrocoma cellularia(A. Agassiz, 1865) was common in the surface waters (0–50 m) of Monterey Bay, but it was not abundant at depth, while the trachymedusa Colobonema sericeum Vanhöffen, 1902 was found in relatively high numbers at mesopelagic depths. During the last two El Niño events, M. cellulariawas observed in higher numbers at mesopelagic depths, whereas C. sericeum was scarce. M. cellularia was found in a wider range of temperatures, salinities, and dissolved oxygen values than was C. sericeum. Transport and tolerance hypotheses are proposed to explain differences in the presence and numerical density of the medusae.     

Prediction of predator–prey populations modelled by perturbed ODEs

In this paper we explore a stochastic model in continuous time for predator-prey interactions, which accounts for the periodical behaviour observed in many animal populations. More precisely, we consider a solution to the classical Lotka-Volterra system of equations, but we view the actual population sizes as random perturbations of the solutions to this ODE system. Namely, we assume that the perturbations follow correlated Ornstein-Uhlenbeck processes; this approach generalizes the one of Froda and Colavita [Aust N Z J Stat 2:235-254, 2005] who considered only i.i.d. errors. This type of perturbed deterministic model allows to perform parameter estimation and to predict population sizes at future times. On the other hand, the present model refines the previous one since it takes into account the variability due to external factors and the time dependence in the random component. Moreover, this more flexible model improves the predictions of population sizes at future times. In order to illustrate this last point, we analyse two data sets.     

The effects of gene flow and population isolation on the genetic structure of␣reintroduced wild turkey populations: Are genetic signatures of source populations retained?

To counter losses of genetic diversity in reintroduced populations, species sometimes are reintroduced into networks of populations with the potential to exchange individuals. In reintroduced populations connected by gene flow, patterns of genetic structure initiated by the founding event may become obscured, and populations may eventually follow an isolation-by-distance model of genetic differentiation. Taking advantage of well-documented reintroduction histories of wild turkey populations in Indiana, we assessed the degree to which gene flow among reintroduced populations has obscured genetic signatures left by the founding events. Using a suite of nuclear microsatellite loci and sequence data from the mitochondrial control region, we characterized the level of genetic diversity and degree of genetic structure within and among: (1) reintroduced populations in isolated northern Indiana Fish and Wildlife Areas, (2) reintroduced populations in southern Indiana Fish and Wildlife Areas, where the distribution of populations is more continuous, and (3) source populations used for these reintroductions. We also utilized individual-based assignment tests to determine the relative contribution of source populations to the current distribution of alleles in reintroduced populations. Our results indicate that wild turkey reintroductions in Indiana have left distinct genetic signatures on populations that are detectable even after several decades. Although we found some case-specific evidence for gene flow, particularly in regions where populations are in close proximity, our data indicate on overall paucity of gene flow at a regional scale. Such post-reintroduction genetic monitoring has immediate implications for the design of optimal strategies to reintroduce wildlife for conservation and management.     

The effect of reintroductions on the genetic variability in Eurasian lynx populations: the cases of Bohemian–Bavarian and Vosges–Palatinian populations

Over the past ~40 years, several attempts were made to reintroduce Eurasian lynx to suitable habitat within their former distribution range in Western Europe. In general, limited numbers of individuals have been released to establish new populations. To evaluate the effects of reintroductions on the genetic status of lynx populations we used 12 microsatellite loci to study lynx populations in the Bohemian–Bavarian and Vosges–Palatinian forests. Compared with autochthonous lynx populations, these two reintroduced populations displayed reduced genetic diversity, particularly the Vosges–Palatinian population. Our genetic data provide further evidence to support the status of ‘endangered’ and ‘critically endangered’ for the Bohemian–Bavarian and Vosges–Palatinian populations, respectively. Regarding conservation management, we highlight the need to limit poaching, and advocate additional translocations to bolster genetic variability.     

Absence of the Δccr5 mutation in indigenous populations of the Brazilian Amazon

Carriers of the deltaccr5 allele, which contains a deletion of 32 bases in relation to the normal allele of the beta-chemokine receptor gene (CCR5), have increased resistance to HIV-1 infection. The higher frequency of this mutation in Europeans than in Blacks and Asians, has generated interest in determining its distribution in other populations. The population of this study involved 300 Amerindians from four Brazilian Amazon tribes (Tikuna, Baniwa, Kashinawa, and Kanamari). All of the individuals were homozygous for the normal allele, which corroborates the hypothesis that the deltaccr5 allele has a European origin, and that its occurrence in urban populations in South America is the result of immigration.     

Is the impact of environmental noise visible in the dynamics of age-structured populations?

Climate change has ignited lively research into its impact on various population-level processes. The research agenda in ecology says that some of the fluctuations in population size are accountable for by the external noise (e.g. weather) modulating the dynamics of populations. We obeyed the agenda by assuming population growth after a resource-limited Leslie matrix model in an age-structured population. The renewal process was disturbed by superimposing noise on the development of numbers in one or several age groups. We constructed models for iteroparous and semelparous breeders so that, for both categories, the population growth rate was matching. We analysed how the modulated population dynamics correlates with the noise signal with different time-lags. No significant correlations were observed for semelparous breeders, whereas for iteroparous breeders high correlations were frequently observed with time-lags of 71 year or longer. However, the latter occurs under red-coloured noise and for low growth rates when the disturbance is on the youngest age group only. It is laborious to find any clear signs of the (red) noise- and age group-specific fluctuations if the disturbance influences older age groups only. These results cast doubts on the possibility of detecting the signature of external disturbance after it has modulated temporal fluctuations in age-structured populations.