真菌漆酶异源表达研究进展

由于漆酶能够氧化芳香类化合物和其它一些非芳香类有机物,具有广泛的底物特异性,因此在纸浆漂白、纺织品染料脱色、有毒废弃物的去除、生物修复和生物传感器等方面具有巨大的应用潜力。但是缺少大量廉价的酶源供应阻碍了漆酶商业化的应用,解决这个问题的一个主要方法就是通过漆酶的异源表达来获得大量的漆酶。综述了真菌漆酶在酵母表达系统和丝状真菌表达系统中表达的研究结果,着重总结了影响漆酶异源表达的因素和提高漆酶表达的策略。     

真菌漆酶及其应用

漆酶是一种含铜多酚氧化酶,在白腐菌中普遍存在,少数低等真菌和植物中也产生,多为分泌型糖蛋白,至少20种漆酶得到了分离和纯化。该酶是一种氨基酸残基在500个左右的单体酶,一般都为酸性蛋白,含有4个铜离子,形成3个活性区域。表面一些氨基酸被不同程度地糖基化,晶体结构和其它一些波谱学研究解释了其空间结构和可能的电子传递机制,运用PCR技术和cDNA文库技术,越来越多的漆酶基因被克隆,许多来源的基因都是以家族形式存在于染色体上的。已研究的漆酶基因中都含有10个左右的内含子,这些内含子在活性域位置上有比较高的保守性。一些特殊序列的存在与否决定了该酶的表达形式－诱导型或组成型,诱导型菌株的调控序列中含有一段受酚类化合物作用的序列,而不含有该序列的酶基因则都是组成型表达的。漆酶在S.cervisiae,Trichnoderma reesei,A.oryzae TATA amylase和Pichia pasti等异源表达系统中有成功表达的报道。漆酶的应用集中在在以下几方面：漆酶参与的有机合成,生物检测,有毒化合物的消除。工业废水处理,纸浆的生物漂白;等等。     

真菌漆酶的酶活测定方法评价

目前真菌漆酶酶活的测定方法多样,没有统一的标准,致使不同研究之间的漆酶酶活无法进行比较分析,也造成漆酶产品在酶活质量意义上的混乱。因此,对测定真菌漆酶酶活的各种不同的分光光度法进行了综述和比较分析,认为采用ABTS法作为测定漆酶酶活的方法较具合理性和科学性,建议作为漆酶酶活测定的统一方法。     

真菌漆酶的结构与功能

漆酶是一种含铜的多酚氧化酶,能催化氧化酚类和芳香类化合物,同时伴随4个电子的转移,并将分子氧还原成水。漆酶结构的解析是阐明其催化作用机理、了解蛋白质结构与功能关系的基础。综述近年来对真菌漆酶蛋白结构及其功能研究的进展。     

不同真菌漆酶的性质研究

为了更好开发利用漆酶,用邻联甲苯胺法比较分析了彩绒革盖菌、毛栓菌和多孔菌在液体培养时的产酶曲线、酶作用的最适pH值、最适酶解温度及无机离子对酶活的影响。结果表明,不同漆酶产酶曲线不同,彩绒革盖菌和多孔菌,第9d达产酶高峰,峰值活力分别达395.6u/ml和412.2u/ml;毛栓菌,第11d达到产酶高峰,峰值本科活较不同真菌漆酶的性质研究高达554.6u/ml。漆酶性质有明显差别,最适酶解温度不同,彩绀革盖菌和多孔菌漆酶最适酶解温度为25℃;毛栓菌为30℃;最适酶解pH值有差异,彩绒革盖菌漆酶最适酶解,pH值为4.5,毛栓菌为4.0,多孔菌为4.2;不同离子对酶活的影响不同;K^、Zn^2 、对彩绒革盖菌所产漆酶有激活作用;K^ 、Zn^2 、Cu^2 对毛栓菌所产漆酶有激活作用;Mn^2 、Mg^2 对多孔菌所产漆酶有激活作用;Ag^ 、Fe^3 对三种菌所产漆本科均有明显抑制作用。     

真菌漆酶及其应用

漆酶是一种含铜多酚氧化酶,在白腐菌中普遍存在,少数低等真菌和植物中也产生,多为分泌型糖蛋白。至少20种漆酶得到了分离和纯化。该酶是一种氨基酸残基在500个左右的单体酶,一般都为酸性蛋白,含有4个铜离子,形成3个活性区域;表面一些氨基酸被不同程度地糖基化。晶体结构和其它一些波谱学研究解释了其空间结构和可能的电子传递机制。运用PCR技术和cDNA文库技术,越来越多的漆酶基因被克隆,许多来源的基因都是以家族形式存在于染色体上的。已研究的漆酶基因中都含有10个左右的内含子,这些内含子在活性域位置上有比较高的保守性。一些特殊序列的存在与否决定了该酶的表达形式-诱导型或组成型,诱导型菌株的调控序列中含有一段受酚类化合物作用的序列,而不含有该序列的酶基因则都是组成型表达的。漆酶在S.cerevisiae、Trichodermareesei、A.oryzaeTATAamylase和Pichiapasti等异源表达系统中有成功表达的报道。漆酶的应用集中在以下几方面:漆酶参与的有机合成;生物检测;有毒化合物的消除;工业废水处理;纸浆的生物漂白;等等。     

包埋法固定化真菌漆酶及其应用研究

采用海藻酸钠包埋法固定真菌漆酶,海藻酸钠和CaCl2的最佳浓度分别为3%和4%,最佳给酶量为30U,最大回收率为48.0%.与游离漆酶相比,固定化漆酶的热稳定性有明显改善,最适反应pH向酸性方向漂移0.5,最适反应温度提高了5℃.使用固定化酶处理低浓度造纸废水,运行8批次后残留酶活为64%.     

真菌漆酶基因研究进展

漆酶是一种含铜的多酚氧化酶,也是木质素生物合成的关键酶之一,目前已发现多种生物能产生漆酶,包括植物、真菌、昆虫、细菌等。其中,以真菌中的白腐菌研究最多。近年来,由于漆酶在生物漂白、农作物秸秆利用以及环境垃圾处理方面具有广阔的应用前景,漆酶研究越来越受到国际上的重视。同时,随着分子生物学相关技术的发展,漆酶研究已深入基因水平,已有多种漆酶基因获得克隆,一些漆酶基因也实现了异源表达。本文概述了真菌漆酶基因研究的最新进展。     

白腐真菌漆酶的固定化及其应用研究*

以尼龙网为载体,戊二醛为交联剂,进行固定化真菌漆酶的条件优化和性质研究,优化条件为：尼龙网在5％的戊二醛溶液中交联6h后,加入30U漆酶溶液固定8h,酶活回收率为50．3％。与游离酶相比,固定化漆酶的热稳定性明显提高,最适pH值略有下降。用该固定化漆酶处理低浓度造纸废水,经过8批次连续试验,酶活保留52％。     

白腐真菌漆酶的纯化及性质

液体发酵培养白腐真菌F9,粗酶液经盐析、透析浓缩、葡聚糖G-100柱层析、DEAE-纤维素离子交换层析四步分离纯化,得电泳纯漆酶。经SDS-PAGE法测定酶的相对分子质量约为6×104,酶活回收率达46.47%,纯度提高了18.86倍。F9漆酶最适反应温度为40℃,最适反应pH为4.8,在35℃以下、pH 4.8～5.4的范围内稳定性较强。其催化愈创木酚的Km为4.61 mmol/L,vm为6.27 mmol/(L.min)。K+对其有激活作用,而Fe2+、Fe3+对其有明显抑制作用。     

Purification and properties of laccase from Botrytis cinerea

The partial purification of an extracellular laccase from Botrytis cinerea is described. Specificity of the enzyme, its K_m for a number of substrates and sensitivity to some inhibitors are described. The enzyme is a typical laccase but has an exceptionally low pI and great stability to acid pH. On gel electrophoresis two isoenzymes could be detected.     

Factors affecting the distribution patterns of zebra and wildebeest in a resource-stressed environment

Understanding the spatial dynamics of landscape use by free-ranging herbivores is integral for successful ecosystem management. We used binary logistic regression analyses to determine the relative importance of biotic, abiotic and human factors in influencing the distribution (presence/absence) of wild grazers on two Maasai ranches in Kenya's Amboseli-Tsavo ecosystem. Both ranches had low grass biomass and suffered from regular droughts. We found that grazers consistently located themselves where grass biomass was highest, usually irrespective of grass quality, suggesting that forage quantity may be the limiting factor where grass biomass is generally low. The availability of surface water had no significant effect on the likelihood of grazers being present, even in the dry season.     

Determining the factors affecting the distribution of Muscari latifolium,an endemic plant of Turkey,and a mapping species distribution model

Species distribution modeling was used to determine factors among the large predictor candidate data set that affect the distribution of Muscari latifolium , an endemic bulbous plant species of Turkey, to quantify the relative importance of each factor and make a potential spatial distribution map of M. latifolium . Models were built using the Boosted Regression Trees method based on 35 presence and 70 absence records obtained through field sampling in the Gönen Dam watershed area of the Kazda?? Mountains in West Anatolia. Large candidate variables of monthly and seasonal climate, fine‐scale land surface, and geologic and biotic variables were simplified using a BRT simplifying procedure. Analyses performed on these resources, direct and indirect variables showed that there were 14 main factors that influence the species’ distribution. Five of the 14 most important variables influencing the distribution of the species are bedrock type, Quercus cerris density, precipitation during the wettest month, Pinus nigra density, and northness. These variables account for approximately 60% of the relative importance for determining the distribution of the species. Prediction performance was assessed by 10 random subsample data sets and gave a maximum the area under a receiver operating characteristic curve (AUC) value of 0.93 and an average AUC value of 0.8. This study provides a significant contribution to the knowledge of the habitat requirements and ecological characteristics of this species. The distribution of this species is explained by a combination of biotic and abiotic factors. Hence, using biotic interaction and fine‐scale land surface variables in species distribution models improved the accuracy and precision of the model. The knowledge of the relationships between distribution patterns and environmental factors and biotic interaction of M. latifolium can help develop a management and conservation strategy for this species.     

Optimisation of the expression of a Trametes versicolor laccase gene in Pichia pastoris

A cDNA encoding a laccase enzyme was isolated from a Trametes versicolor cDNA library. The gene was subcloned into the Pichia pastoris expression vector pPIC3.5 and transformed into the P. pastoris strains KM71 and GS115. Laccase-secreting transformants were selected by their ability to oxidise the substrate ABTS. No difference in laccase activity was observed between culture supernatants from GS115 (proteolytic) and KM71 (nonproteolytic) strains. The presence of at least 200 μM copper was necessary for optimal laccase activity in the culture supernatants. During growth of P. pastoris on minimal medium the pH of the medium was reduced to <3.0. If alanine was added to the medium the pH reduction was not as pronounced and at alanine concentrations >0.6% w/v the pH was kept constant for >7 days. Cultures in which the pH was maintained by alanine metabolism produced higher levels of laccase activity than those grown in the absence of alanine. This study describes the development of a medium that allows convenient pH control of P. pastoris without the need for continuous neutralisation. Journal of Industrial Microbiology & Biotechnology (2002) 29, 55–59 doi:10.1038/sj.jim.7000268 Received 08 August 2001/ Accepted in revised form 18 April 2002     

基因芯片研究植物逆境基因表达新进展

逆境胁迫影响植物的正常生长, 导致作物减产, 甚至绝收。提高作物的抗逆性一直是作物遗传育种学家追求的目标, 大量研究也正试图揭示这一复杂的生物学机制。传统的从生理生化水平到单一基因的研究都难以揭示植物复杂的抗逆机制, 而基因芯片(Gene chip)的应用使得这一目标成为了可能, 基因芯片从整个转录水平入手, 能够揭示大量基因的表达和调控情况, 同时结合蛋白质组学和代谢组学的研究方法, 将基因定位于代谢途径的某个位置, 寻找逆境胁迫响应的关键基因, 完善植物逆境胁迫响应的分子网络, 为今后利用生物技术手段提高作物抗逆境胁迫能力提供依据。文章主要对近年来基因芯片在植物逆境胁迫基因表达研究中的进展进行了综述。     

NAC转录因子在植物抗病和抗非生物胁迫反应中的作用

NAC转录因子是植物特有的一类转录因子,其共同特点是在N端含有一段高度保守、由约150个氨基酸组成的NAC结构域,而C端为高度变异的转录调控区。研究表明,NAC转录因子不仅参与植物生长发育的调控,而且在植物抗逆反应中具有重要的调控作用。文章着重介绍NAC转录因子在植物抗逆反应中的作用及其调控机制,并简要讨论NAC转录因子生物学功能的研究方向。     

Oxidation of carbazole, N-ethylcarbazole, fluorene, and dibenzothiophene by the laccase of Coriolopsis gallica

Purified laccase from Coriolopsis gallica UAMH8260 oxidized carbazole, N-ethylcarbazole, fluorene, and dibenzothiophene in the presence of 1-hydroxybenzotriazole and 2,2-azinobis (3-ethylbenzthiazoline-6-sulfonic acid) as free radical mediators. Susceptibility to laccase oxidation appears related to the ionization potential (IP) of the substrate: compounds with an IP above 8.52, dibenzofuran (IP = 8.77) and benzothiophene (IP = 8.73) were not attacked. Carbazole (IP = 7.68) was the most sensitive to oxidation with >99% transformed with 10 milliunits of laccase after 1 h, though most reactions were carried out for 18 h. 9-Fluorenone was identified as the product of fluorene (IP = 8.52) oxidation, and dibenzothiophene sulfone from dibenzothiophene (IP = 8.44). Although carbazole and N-ethylcarbazole were both completely removed within 18 h, no oxidation or condensation metabolites were detected. This investigation is the first to report the oxidation of dibenzothiophene, carbazole, and N-ethylcarbazole by laccase.     

新月旋孢腔菌胞内漆酶的活性测定及漆酶基因ClLac1克隆

漆酶是一种含铜的多酚氧化酶,与植物病原菌致病性、黑色素合成及降解木质素等方面相关。为明确漆酶在新月旋孢腔菌的催化作用及其催化活性,以2,2′-连氮-双(3-乙基苯并噻唑-6-磺酸)（简称ABTS）为底物,利用分光光度计在420nm下测定胞内漆酶活力,结果表明酶活测定最佳反应条件为缓冲液pH2.8、Cu2+浓度500μmol/L和0.6mmol/L ABTS。根据漆酶Cu2+结合保守结构域设计了1条引物,对新月旋孢腔菌漆酶基因进行克隆,并通过RACE技术克隆了其全长cDNA序列。开放阅读框长1,803bp,