Larval export from marine reserves and the recruitment benefit for fish and fisheries

Marine reserves, areas closed to all forms of fishing, continue to be advocated and implemented to supplement fisheries and conserve populations. However, although the reproductive potential of important fishery species can dramatically increase inside reserves, the extent to which larval offspring are exported and the relative contribution of reserves to recruitment in fished and protected populations are unknown. Using genetic parentage analyses, we resolve patterns of larval dispersal for two species of exploited coral reef fish within a network of marine reserves on the Great Barrier Reef. In a 1,000 km(2) study area, populations resident in three reserves exported 83% (coral trout, Plectropomus maculatus) and 55% (stripey snapper, Lutjanus carponotatus) of assigned offspring to fished reefs, with the remainder having recruited to natal reserves or other reserves in the region. We estimate that reserves, which account for just 28% of the local reef area, produced approximately half of all juvenile recruitment to both reserve and fished reefs within 30 km. Our results provide compelling evidence that adequately protected reserve networks can make a significant contribution to the replenishment of populations on both reserve and fished reefs at a scale that benefits local stakeholders.     

Size-structural shifts reveal intensity of exploitation in coral reef fisheries

Fisheries exploitation represents a considerable threat to coral reef fish resources because even modest levels of extraction can alter ecological dynamics via shifts of stock size, species composition, and size-structure of the fish assemblage. Although species occupying higher trophic groups are known to suffer the majority of exploitative effects, changes in composition among lower trophic groups may be major, though are not frequently explored. Using size-based biomass spectrum analysis, we investigate the effects of fishing on the size-structure of coral reef fish assemblages spanning four geopolitical regions and determine if patterns of exploitation vary across trophic groups. Our analyses reveal striking evidence for the variety of effects fisheries exploitation can have on coral reef fish assemblages. When examining biomass spectra across the entire fish assemblage we found consistent evidence of size-specific exploitation, in which large-bodied individuals experience disproportionate reductions. The pattern was paralleled by and likely driven by, strongly size-specific reductions among top predators. In contrast, evidence of exploitation patterns was variable among lower trophic groups, in many cases including evidence of reductions across all size classes. The breadth of size classes and trophic groups that showed evidence of exploitation related positively to local human population density and diversity of fishing methods employed. Our findings highlight the complexity of coral reef fisheries and that the effects of exploitation on coral reefs can be realized throughout the entire fish assemblage, across multiple trophic groups and not solely restricted to large-bodied top-predators. Size-specific changes among fishes of lower trophic groups likely lead to altered ecological functioning of heavily exploited coral reefs. Together these findings reinforce the value of taking a multi-trophic group approach to monitoring and managing coral reef fisheries.     

Coral reef cascades and the indirect effects of predator removal by exploitation

Fisheries exploitation provides the opportunity to examine the ecosystem‐scale biodiversity consequences of predator removal. We document predatory reef fish densities, coral‐eating starfish densities and coral reef structure along a 13‐island gradient of subsistence exploitation in Fiji. Along the fishing intensity gradient, predator densities declined by 61% and starfish densities increased by three orders of magnitude. Reef‐building corals and coralline algae declined by 35% and were replaced by non‐reef building taxa (mainly filamentous algae), as a result of starfish predation. Starfish populations exhibited thresholds and Allee‐type dynamics: population growth was negative under light fishing intensities and high predator densities, and positive on islands with higher fishing intensities and low predator densities. These results suggest the depletion of functionally important consumer species by exploitation can indirectly influence coral reef ecosystem structure and function at the scale of islands.     

永兴岛附近海域珊瑚礁鱼类群落结构特征

为更好地保护和管理西沙永兴岛附近海域珊瑚礁鱼类,于2020—2021年对永兴岛上岸渔获物进行了调查研究,分析了鱼类群落结构组成及其变化和演替特征。结果表明:调查共发现永兴岛附近海域珊瑚礁鱼类101种,隶属于5目21科,以鲈形目鱼类最多,占总种类的84.16%,生物量超总渔获物的90%;科级水平鹦嘴鱼科鱼类最多,达21种,生物量超总渔获物的45%。28种珊瑚礁鱼类是永兴岛附近海域主要捕捞对象,占总渔获物的80%以上。永兴岛附近海域珊瑚礁鱼类呈现过度捕捞,一是主要渔获物中的中大型鱼类均重偏小;二是本海域个体体型最大的鱼类出现较多消亡;三是肉食性鱼类大量消亡;四是植食性鱼类生物量占比超过了肉食性鱼类。永兴岛附近海域珊瑚礁鱼类已经演替到以植食性鱼类为主导的生态系统;大量海胆的出现,表明了这一珊瑚礁生态系统在进一步衰退,向以海胆为主导的生态系统演变。保护西沙永兴岛附近海域珊瑚礁鱼类已经刻不容缓,需要严格地控制本海域的捕捞强度。     

Applying a ridge-to-reef framework to support watershed,water quality,and community-based fisheries management in American Samoa

Water quality and fisheries exploitation are localized, chronic stressors that impact coral reef condition and resilience. Yet, quantifying the relative contribution of individual stressors and evaluating the degree of human impact to any particular reef are difficult due to the inherent variation in biological assemblages that exists across and within island scales. We developed a framework to first account for island-scale variation in biological assemblages, and then evaluate the condition of 26 reefs adjacent to watersheds in Tutuila, American Samoa. Water quality data collected over 1 year were first linked with watershed characteristics such as land use and human population. Dissolved inorganic nitrogen (DIN) concentrations were best predicted by total human population and disturbed land for watersheds with over 200 humans km⁻², providing a predictive threshold for DIN enrichment attributed to human populations. Coral reef assemblages were next partitioned into three distinct reeftypes to account for inherent variation in biological assemblages and isolate upon local stressors. Regression models suggested that watershed characteristics linked with DIN and fishing access best predicted ecological condition scores, but their influences differed. Relationships were weakest between coral assemblages and watershed-based proxies of DIN, and strongest between fish assemblages and distances to boat harbors and wave energy (i.e., accessibility). While we did not explicitly address the potential recursivity between fish and coral assemblages, there was a weak overall correlation between these ecological condition scores. Instead, the more complex, recursive nature between reef fish and habitats was discussed with respect to bottom-up and top-down processes, and several ongoing studies that can better help address this topic into the future were identified. The framework used here showed the spatial variation of stressor influence, and the specific assemblage attributes influenced by natural and anthropogenic drivers which aims to guide a local ridge-to-reef management strategy.

     

Coral–algal phase shifts alter fish communities and reduce fisheries production

Anthropogenic stress has been shown to reduce coral coverage in ecosystems all over the world. A phase shift towards an algae‐dominated system may accompany coral loss. In this case, the composition of the reef‐associated fish assemblage will change and human communities relying on reef fisheries for income and food security may be negatively impacted. We present a case study based on the Raja Ampat Archipelago in Eastern Indonesia. Using a dynamic food web model, we simulate the loss of coral reefs with accompanied transition towards an algae‐dominated state and quantify the likely change in fish populations and fisheries productivity. One set of simulations represents extreme scenarios, including 100% loss of coral. In this experiment, ecosystem changes are driven by coral loss itself and a degree of habitat dependency by reef fish is assumed. An alternative simulation is presented without assumed habitat dependency, where changes to the ecosystem are driven by historical observations of reef fish communities when coral is lost. The coral–algal phase shift results in reduced biodiversity and ecosystem maturity. Relative increases in the biomass of small‐bodied fish species mean higher productivity on reefs overall, but much reduced landings of traditionally targeted species.     

Exploitation-related reef fish species richness depletion in the epicenter of marine biodiversity

The central Visayan region of the Philippines historically has the highest concentration of coral reef fishes than any other large marine area in the world. This well-supported biogeographic phenomenon is contradicted by recent transect observations on coral reefs that indicates that the Visayan region and the southern Philippine Sea region have the lowest species richness in the Philippines. The Visayan region has unusually low counts of species typically exploited in fisheries and the aquarium trade. This evidence, coupled with numerous reports of intense fishing and habitat degradation and subsequent species declines at local scales suggests that this exploitation is having a cumulative effect on the overall species richness of the Visayan region. Successes in Marine Protected Areas in this region in increasing species richness at local scales suggests that improved management of these protected areas coupled with much more intensive fisheries management will be key to reviving a healthy biodiversity in the Visayas.     

Working with,not against,coral-reef fisheries

The fisheries policies of some Pacific island nations are more appropriate to the biology of their resources than are some of the fisheries policies of more industrialized countries. Exclusive local ownership of natural resources in Palau encourages adjustive management on biologically relevant scales of time and space and promotes responsibility by reducing the tragedy of the commons. The presence of large individuals in fish populations and adequate size of spawning aggregations are more efficient and meaningful cues for timely management than are surveys of abundance or biomass. Taking fish from populations more than halfway to their carrying capacity is working favorably with the fishery because removing fish potentially increases resource stability by negative feedback between stock size and population production. Taking the same amount of fish from a population below half its carrying capacity is working against the fishery, making the population unstable, because reducing the reproductive stock potentially accelerates reduction of the population production by positive feedback. Reef fish are consumed locally, while Palauan laws ban the export of reef resources. This is consistent with the high gross primary production with little excess net production from undisturbed coral-reef ecosystems. The relatively rapid growth rates, short life spans, reliable recruitment and wide-ranging movements of open-ocean fishes such as scombrids make them much more productive than coral-reef fishes. The greater fisheries yield per square kilometer in the open ocean multiplied by well over a thousand times the area of the exclusive economic zone than that of Palau’s coral reefs should encourage Palauans to keep reef fishes for subsistence and to feed tourists open-ocean fishes. Fisheries having only artisanal means should be encouraged to increase the yield and sustainability by moving away from coral reefs to bulk harvesting of nearshore pelagics.     

The role of marine reserves in the replenishment of a locally impacted population of anemonefish on the Great Barrier Reef

The development of parentage analysis to track the dispersal of juvenile offspring has given us unprecedented insight into the population dynamics of coral reef fishes. These tools now have the potential to inform fisheries management and species conservation, particularly for small fragmented populations under threat from exploitation and disturbance. In this study, we resolve patterns of larval dispersal for a population of the anemonefish Amphiprion melanopus in the Keppel Islands (southern Great Barrier Reef). Habitat loss and fishing appear to have impacted this population and a network of no‐take marine reserves currently protects 75% of the potential breeders. Using parentage analysis, we estimate that 21% of recruitment in the island group was generated locally and that breeding adults living in reserves were responsible for 79% (31 of 39) of these of locally produced juveniles. Overall, the network of reserves was fully connected via larval dispersal; however, one reserve was identified as a critical source of larvae for the island group. The population in the Keppel Islands also appears to be well‐connected to other source populations at least 60 km away, given that 79% (145 of 184) of the juveniles sampled remained unassigned in the parentage analysis. We estimated the effective size of the A. melanopus metapopulation to be 745 (582–993 95% CI) and recommend continued monitoring of its genetic status. Maintaining connectivity with populations beyond the Keppel Islands and recovery of local recruitment habitat, potentially through active restoration of host anemone populations, will be important for its long‐term persistence.     

Zooarchaeological analysis of prehistoric vertebrate exploitation at the Grand Bay Site,Carriacou, West Indies

This paper discusses zooarchaeological analysis of vertebrate faunal specimens from Grand Bay, a Ceramic Age (ca.ad 400–1300) site on the island of Carriacou in the Grenadines, West Indies. Using faunal data to assess subsistence patterns of vertebrate exploitation during late site occupation, we can begin to better understand Grand Bay procurement strategies and coral reef exploitation. Preliminary zooarchaeological results imply that Grand Bay vertebrate exploitation emphasized marine resources over terrestrial resources, with particular emphasis on coral reef habitats and fish. The faunal data are discussed in relation to common patterns of prehistoric vertebrate exploitation in the Caribbean and fishing strategies. The Grand Bay faunal sample also provides a foundation from which to formulate future research foci and question zooarchaeological approaches to understanding prehistoric coral reef exploitation in the Caribbean.     

New estimates of global and regional coral reef areas

 Global and regional coral reef area statistics are of considerable value in fields ranging from global environmental change to fisheries to conservation. Although widely quoted, Smith’s 1978 figure of 600 000 km² is only an approximate calculation. The World Conservation Monitoring Centre has prepared a new estimate of reef coverage by mapping emergent reef crest and very shallow reef systems. These data were rasterised, using 1 km grid squares, as a means of reducing errors arising from variation in scale. Global and regional reef coverages were calculated from the resultant grid. The total global area is estimated at 255 000 km², considerably lower than many previous estimates. Variation in reef area estimates is, in part, a function of variation in reef definition. Accepted: 3 April 1997     

Extinction vulnerability of coral reef fishes

With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate.     

Coral reef conservation in Bali in light of international best practice,a literature review

Bali, Indonesia sits within the coral triangle and is internationally recognised for its high coral reef diversity. The health of Bali’s marine ecosystems has declined in recent decades, and this is thought to be due to threats from climate change, destructive fishing practices, pollution, outbreaks coral eating invertebrates, coral disease and unsustainable tourism. As a response, multiple conservation strategies have been introduced by the island’s communities, non-government organisations and governments, with the aim of preventing further decline, as well as restoring already degraded coral reefs. This literature review provides an in-depth analysis of the tools used to conserve Bali’s coral reefs, and compares them to those used in other countries. In light of international ‘best practice’ in coral reef conservation, this review makes suggestions on how Bali could better conserve its coral reef ecosystems. These include (1) increasing its designation of official Marine Protected Areas (MPAS) and strengthening management of existing ones, (2) creating an MPA network, (3) substantially reducing marine plastic pollution, (4) continuing artificial reef construction in degraded habitats, (5) continuing to develop Bali as an ecotourism destination, (6) increasing engagement in global science to inform marine conservation decision-making, and (7) developing more marine monitoring programmes.     

Movement in a large predatory fish: coral trout, Plectropomus leopardus (Pisces: Serranidae), on Heron Reef, Australia

 Movement by the larger more mobile species of coral reef fish plays a significant role in determining patterns in abundance and population structure. Fish movement is also relevant to the use and effectiveness of marine reserves in managing fish populations. Coral trout are large piscivorous serranids supporting major fisheries on the Great Barrier Reef (GBR). This study reports on the within-reef movement of the common coral trout, Plectropomus leopardus, at Heron Reef, southern GBR, over a twelve month period, investigated by tagging and underwater tracking. Tracking of coral trout revealed no apparent relationship between the area moved and stage of tide or time of day. However, movement areas were affected by the size of fish: in spring a linear relationship between fish size and area of movement was measured, but in summer the largest (male) fish moved over significantly smaller areas than medium-sized fish. Movement of males may be related to cleaning behaviour and spawning. Fifty nine percent (n=101) of the tagged fish were resighted over periods of 4–5 months, in “home sites” measuring ∼2000 m². Coral trout were not restricted to home sites, but moved on average 2 km along the reef slope; maximum distances of 7–7.5 km were measured. Coral trout appear to range as mobile, opportunistic predators, but also maintain home sites for access to shelter and cleaning stations. Accepted: 1 August 1996     

Human impacts on the species-area relationship in reef fish assemblages

The relationship between species richness and area is one of the oldest, most recognized patterns in ecology. Here we provide empirical evidence for strong impacts of fisheries exploitation on the slope of the species–area relationship (SAR). Using comparative field surveys of fish on protected and exploited reefs in three oceans and the Mediterranean Sea, we show that exploitation consistently depresses the slope of the SAR for both power-law and exponential models. The magnitude of change appears to be proportional to fishing intensity. Results are independent of taxonomic resolution and robust across coral and rocky reefs, sampling protocols and statistical methods. Changes in species richness, relative abundance and patch occupancy all appear to contribute to this pattern. We conclude that exploitation pressure impacts the fundamental scaling of biodiversity as well as the species richness and spatial distribution patterns of reef fish. We propose that species–area curves can be sensitive indicators of community-level changes in biodiversity, and may be useful in quantifying the human imprint on reef biodiversity, and potentially elsewhere.     

Assembly rules of reef corals are flexible along a steep climatic gradient

Coral reefs, one of the world's most complex and vulnerable ecosystems, face an uncertain future in coming decades as they continue to respond to anthropogenic climate change, overfishing, pollution, and other human impacts [1, 2]. Traditionally, marine macroecology is based on presence/absence data from taxonomic checklists or geographic ranges, providing a qualitative overview of spatial shifts in species richness that treats rare and common species equally [3, 4]. As a consequence, regional and long-term shifts in relative abundances of individual taxa are poorly understood. Here we apply a more rigorous quantitative approach to examine large-scale spatial variation in the species composition and abundance of corals on midshelf reefs along the length of Australia's Great Barrier Reef, a biogeographic region where species richness is high and relatively homogeneous [5]. We demonstrate that important functional components of coral assemblages "sample" space differently at 132 sites separated by up to 1740 km, leading to complex latitudinal shifts in patterns of absolute and relative abundance. The flexibility in community composition that we document along latitudinal environmental gradients indicates that climate change is likely to result in a reassortment of coral reef taxa rather than wholesale loss of entire reef ecosystems.     

Mycobacteriosis in wild rabbitfish Siganus rivulatus associated with cage farming in the Gulf of Eilat, Red Sea

Infection patterns of Mycobacterium marinum were studied over a period of 3 yr in wild rabbitfish Siganus nivulatus populations associated with commercial mariculture cages and inhabiting various sites along the Israeli Red Sea coastline. Mycobacteriosis was first recorded from the Red Sea in 1990 in farmed sea bass Dicentrarchus labrax and is absent from records of studies on parasites and diseases of wild rabbitfish carried out in the 1970s and 1980s. A sharp increase in the prevalence of the disease in cultured and wild fish in the region has occurred since. A total of 1142 rabbitfish were examined over a 3 yr period from inside mariculture net cages, from the cage surroundings and from several sites along the coast. Histological sections of spleens were examined for presence of granulomatous lesions. Overall prevalence levels of 50% were recorded in the rabbitfish sampled inside the net cages and 39% at the cages' close surroundings, 21% at a sandy beach site 1.2 km westwards, 35% at Eilat harbour 3 km to the south and 42% at a coral reef site about 10 km south of the cages. In addition, 147 fish belonging to 18 native Red Sea species were sampled from 2 sites, the net cage farm perimeter and the coral reef area, and examined for similar lesions. None of those from the coral reef were infected with Mycobacterium; however, 9 of 14 species collected from the cage surroundings were infected. An increase in prevalence of mycobacteriosis in the mariculture farm area was noted from 1995 to 1997. At the same time, a significant increase in prevalence was also apparent at the coral reef sampling site. Two M. marinum isolates from rabbitfish captured at Eilat harbour and the coral reef site were shown by 16S rDNA sequencing analysis to be identical to isolates from rabbitfish trapped inside the mariculture cages as well as isolates from locally cultured sea bass D. labrax. The implications of spreading of M. marinum infection in wild fish populations in the Gulf of Eilat are discussed.     

Variation in diversity of coral reef fish between French Polynesian atolls

The diversity of coral reef fish in seven atolls in French Polynesia is analyzed with respect to geomorphological characteristics of the atolls. The results show that size of the lagoon is more important than confinement in affecting overall fish diversity. This result suggests that island biogeographic theory, as developed by MacArthur and Wilson for terrestrial animals, also applies to reef fish in that more area gives more habitat complexity which, in turn, supports higher fish diversity. However, species diversity within a given family appears to be affected more by ecological parameters, such as living coral cover, food diversity, and reproductive behavior, than geomorphological features.     

Detection of gaps in the spatial coverage of coral reef monitoring projects in the US Caribbean and Gulf of Mexico

As part of the US Coral Reef Task Force's National Program to Map, Assess, Inventory, and Monitor US Coral Reef Ecosystems, a comprehensive survey of projects/programs monitoring coral reef ecosystems and related habitats (i.e., seagrass beds and mangroves) in the US Caribbean and Pacific was undertaken. Information was gathered on a total of 296 monitoring and assessment projects conducted since 1990 in the US Caribbean and the Gulf of Mexico. Substantial gaps in monitoring coverage of US coral reef ecosystems were revealed through geographic information system (GIS) analysis of survey metadata. Although southern Florida contains approximately two-thirds of all marine monitoring projects found in the US Caribbean and Gulf of Mexico, we were unable to identify any ongoing projects that monitor coral reefs along Florida's western coast and off of the Florida Middle Grounds. Additionally, Florida is covered by approximately 1 900 km2 of mangroves, yet there were only four ongoing projects that monitor this ecosystem, leaving gaps in coverage in the Lower and Middle Keys and along the eastern and western coasts. The Flower Garden Banks National Marine Sanctuary, located offshore of the Texas/Louisiana border, has an integral long-term monitoring program, but lacks a monitoring project that gathers long-term, quantitative data on reef lish abundance and certain water quality parameters. Numerous coral reef monitoring projects in Puerto Rico are concentrated on the island's southwestern coast surrounding La Parguera, while far fewer monitoring projects are conducted along the northern and southeastern coasts and around Vieques Island. In the US Virgin Islands, the paucity of monitoring projects in large areas of St. Croix and St. Thomas contrasts with monitoring activity in three marine protected areas (MPAs), where 66% of the US Virgin Islands' coral reef monitoring sites were found. Only a series of assessments have been conducted at Navassa, a small, uninhabited island located 55 km west of Haiti and 137 km northeast of Jamaica. In order to better understand changes in coral reef communities and to produce a series of biennial reports on the status of US coral reef ecosystems, the National Oceanic and Atmospheric Administration (NOAA) is developing a national coral reef monitoring network. This network has already begun to fill some of these gaps in monitoring coverage through issuing cooperative grants to states and territories to build long-term monitoring capacity.