CD126功能域三维结构研究进展

ＣＤ１２６功能域三维结构的研究对研制具有不同生物学活性的新型ＩＬ－６Ｒ突变体和进行基于ＣＤ１２６三维结构的药物分子设计研究有重要的指导意义。本文概述ＣＤ１２６空间结构预测及同源模建的研究进展,并总结ＣＤ１２６与其配基ＩＬ－６形成高亲和力受体复合物时构－效关系分析的研究动态。     

人白细胞介素－2的两个部分拮抗剂

通过定点诱变技术得到６个生物活性剧烈下降的人白细胞介素－２（ＩＬ－２）突变体,其中两个突变体即１５Ｖａｌ－ＩＬ－２和１２６Ａｓｐ－ＩＬ－２可以在一定浓度范围内使ＩＬ－２的生物效应降低。在对高亲和力ＩＬ－２受体（ＩＬ－２Ｒ）的竞争抑制实验中,１５Ｖａｌ－ＩＬ－２和１２６Ａｓｐ－Ｉｌ－２又表现了一定的竞争能力。这些结果表明１５Ｖａｌ－ＩＬ－２和１２６Ａｓｐ－ＩＬ－２可部分拮抗天然ＩＬ－２的作用。结合Ｉ     

小鼠胸树突状细胞系自发分泌多种类型细胞因子

建成小鼠胸腺基质细胞系，命名为ＭＴＳＣ４，经鉴定分析认为是ＤＣ来源。在无外来刺激条件下，ＭＴＳＣ４细胞可自发分泌多种类型细胞因子，已检测到的有ＩＬ－１，ＩＬ－６，ＩＬ－７，ＣＳＦ，ＩＦＮ及趋化因子（ＣＦ）等。其中ＩＬ－６，ＩＦＮ为较高水平分泌量，ＩＬ－１、ＣＦ为中等水平，ＩＬ－７、ＣＳＦ为较低水平分泌量。ＭＴＳＣ４不能自发分泌ＩＬ－３及ＴＮＦａ。ＭＴＳＣ４的建立有利于分析胸腺选择特别是阴性选择的机     

IL－7对早期胸腺细胞发育的作用

胸腺基质细胞分泌白细胞介素７（ＩＬ－７）。ＩＬ－７是早期Ｔ细胞的重要生长因子之一。它能选择性促进ＣＤ４－ＣＤ８－和ＣＤ４＋ＣＤ８－／ＣＤ４－ＣＤ８＋细胞增殖。ＩＬ－７主要维持早期前体Ｔ细胞存活,同时保持其Ｔ前体细胞潜能。ＩＬ－７对胸腺细胞分化的作用目前仍有争议。     

IL—7对早期胸腺细胞发育的作用

胸腺基质细胞分泌白细胞介素７（ＩＬ－７）。ＩＬ－７是早期Ｔ细胞的重要生长因子之一。它能选择性促进ＣＤ４＾－ＣＤ８＾－和ＣＤ４＾＋ＣＤ８＾－／ＣＤ４＾－ＣＤ８＾＋细胞增殖。ＩＬ－７主要维持早期前体Ｔ细胞存活,同时保持其Ｔ前体细胞潜能。ＩＬ－７结胸腺细胞分化的作用目前仍有争议。     

重组IL—6与IL—3或／和GM—CSF合用对正常NB大鼠粒单系体外…

本研究探讨了重组人ＩＬ－６与大鼠ＩＬ－３和／或小鼠ＧＭ－ＣＳＦ结合对正常ＢＮ大鼠粒单系体外造血的调控效应。结果表明,ＩＬ－６在１０００－４０００Ｕ／ｍｌ呈剂量依赖性刺激粒系造血祖细胞集落形成及骨髓细胞的ＤＮＡ合成,集落以ＧＭ型为主,其刺激活性低于ＩＬ－３或ＧＭ－ＣＳＦ。ＩＬ－６与ＩＬ－３和或ＧＭ－ＣＳＦ的结合对粒单系集落形成及ＤＮＡ合成无协同或相加作用,甚至出现拮抗效应,但却显著增大集落,提示ＩＬ     

GM－CSF和IL－3对脐带血CD34~＋细胞植入骨髓基质的促进作用

利用抗ＣＤ３４单克隆抗体吸附磁性微球的方法分离纯化脐带血ＣＤ３４＋细胞，将其种入照射后的成年骨髓基质。比较ｒｈＧＭ－ＣＳＦ、ＩＬ－３及两者的联合对植入效率的促进作用。结果表明：经２ｈ铺展贴壁后，对照组只有３６％的ＣＤ３４＋细胞植入基质，而生长因子预处理组则有６８—８９．６％的ＣＤ３４＋细胞植入基质。在长期液体培养体系中则显示了植入ＣＤ３４＋细胞多的处理组造血重建快速而持久。表明ＧＭ－ＣＳＦ和ＩＬ－３预处理将明显提高脐带血移植效率。     

重组IL－6与IL－3或／和GM－CSF合用对正常BN大鼠粒单系体外造血的调控效应

本研究探讨了重组人ＩＬ－６与大鼠ＩＬ－３和／或小鼠ＧＭ－ＣＳＦ结合对正常ＢＮ大鼠粒单系体外造血的调控效应。结果表明,ＩＬ－６在１０００－４０００Ｕ／ｍｌ呈剂量依赖性刺激粒系造血祖细胞集落形成及骨髓细胞的ＤＮＡ合成,集落以ＧＭ型为主,其刺激活性低于ＩＬ－３或ＣＭ－ＣＳＦ。ｌＬ－６与ＩＬ－３和／或ＧＭ－ＣＳＦ的结合对粒单系集落形成及ＤＮＡ合成无协同或相加作用,甚至出现拮抗效应,但却显著增大集落。提示ＩＬ－６可能具有双向调控作用,促进早期造血细胞的增殖,拮抗其它因子对晚期粒单系造血的刺激作用;具有重叠生物效应的这３种细胞因子在调控造血时,它们之间的相互作用应是顺序的而不是同时的。     

IL—2部分拮抗剂可用于IL—2突变体对受体亚基结合能…

用定点突变法分别得到了两个人白细胞介素－２（ＩＬ－２）的部分拮抗剂１５Ｖａｌ－ＩＬ－２和１２６Ａｓｐ－ＩＬ－２以及一个为ＩＬ－２受体ａ亚基结合缺陷型的突变体６２Ｌｅｕ－ＩＬ－２,当将１５Ｖａｌ－ＩＬ－２或１２６Ａｓｐ－ＩＬ－２与６２Ｌｅｕ－Ｉｌ－２共同保温时,６２Ｌｅｕ－ＩＬ－２的活性受到明显抑制,对此现象机理的分析表明１５Ｖａｌ－ＩＬ－２或１２６Ａｓｐ－ＩＬ－２可用于ＩＬ－２受体亚基结合缺陷型突     

人白介素6受体基因在痘苗病毒载体系统中的表达

人ＩＬ－６受体是一个在各种细胞上广泛表达的跨膜糖蛋白分子,是ＩＬ－６发挥细胞效应所必需的。本文通过将ＩＬ－６ＲｃＤＮＡ重组到痘苗病毒的ＴＫ基因中构建成重组痘苗病毒ＶＩＬ６Ｒ。细胞原位杂交和ＡＰＡＡＰ染色结果表明,感染ＶＩＬ６Ｒ后的Ｖｅｒｏ细胞中,ＩＬ－６Ｒ在ｍＲＮＡ和蛋白水平上均呈现较强的表达。Ｗｅｓｔｅｒｎｂｌｏｔ分析所表达的分子量为８０ｋＤ,表明所表达的产物是糖基化的。ＩＬ－６结合试验表明,表达的膜ＩＬ－６Ｒ能够结合ｒＩＬ－６,说明它是有功能的。利用ＶＩＬ６Ｒ免疫小鼠后,能够刺激较强的抗体产生。从而为进一步研究ＩＬ－６Ｒ的信号传导和构效关系提供了基础。     

Conformational analysis of the blue-light sensing protein YtvA reveals a competitive interface for LOV-LOV dimerization and interdomain interactions.

The Bacillus subtilis protein YtvA is related to plant phototropins in that it senses UVA-blue-light by means of the flavin binding LOV domain, linked to a nucleotide-binding STAS domain. The structural basis for interdomain interactions and functional regulation are not known. Here we report the conformational analysis of three YtvA constructs, by means of size exclusion chromatography, circular dichroism (CD) and molecular docking simulations. The isolated YtvA-LOV domain (YLOV, aa 25-126) has a strong tendency to dimerize, prevented in full-length YtvA, but still observed in YLOV carrying the N-terminal extension (N-YLOV, aa 1-126). The analysis of CD data shows that both the N-terminal cap and the linker region (aa 127-147) between the LOV and the STAS domain are helical and that the central beta-scaffold is distorted in the LOV domains dimers. The involvement of the central beta-scaffold in dimerization is supported by docking simulation of the YLOV dimer and the importance of this region is highlighted by light-induced conformational changes, emerging from the CD data analysis. In YtvA, the beta-strand fraction is notably less distorted and distinct light-driven changes in the loops/turn fraction are detected. The data uncover a common surface for LOV-LOV and intraprotein interaction, involving the central beta-scaffold, and offer hints to investigate the molecular basis of light-activation and regulation in LOV proteins.     

Interactions of caveolin-1 scaffolding and intramembrane regions containing a CRAC motif with cholesterol in lipid bilayers

Caveolin-1 is a major structural protein of caveolae and specifically binds cholesterol (Chol). The caveolin scaffolding domain is thought to be involved in caveolin–Chol interaction through the sequence V94-T-K-Y-W-F-Y-R101, a motif that matches a cholesterol recognition amino-acid consensus (CRAC). In the present work, three CRAC-containing peptides, corresponding to caveolin-1 94–101, 82–101 and 93–126, were tested to study the role of the CRAC motif in the caveolin–Chol interaction in 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) bilayers using differential scanning calorimetry (DSC), fluorescence and circular dichroism (CD). The Y97I substituents of the three peptides and one peptide segment corresponding to caveolin-1 101–126 that excludes the CRAC motif were also tested for comparison. Our results showed the potency of these CRAC-containing peptides in sequestering Chol into domains and the enhanced role of the intramembrane domain and scaffolding domain for the potency. Of the three CRAC-containing peptides, the peptide 93–126 was particularly effective in promoting Chol segregation, while the peptide 82–101 was less potent in promoting the formation of domains than the peptide 93–126, but was more potent than the peptide 94–101. The domain partition of DPPC/Chol bilayers was not observed in the presence of the peptide 101–126, in contrast to the case in the presence of the peptide 93–126 at the same concentrations of peptide and Chol. The potency of the CRAC motif in Chol segregation was lowered by the Y97I mutation. The difference in structure may be a factor that contributes to different effects of these peptides on the distribution of Chol in the lipid membrane.     

Characterization of the surface topography and putative tertiary structure of the human CD7 molecule

The CD7 gp40 molecule is a member of the Ig gene superfamily and is expressed on T cell precursors before their entry into the thymus during fetal development. N-terminal amino acids 1-107 of CD7 are highly homologous to Ig kappa-L chains whereas the carboxyl-terminal region of the extracellular domain of CD7 is proline-rich and has been postulated to form a stalk from which the Ig domain projects. To define potential functional regions of CD7, we have studied the surface topography of the CD7 Ag by synthesizing peptides corresponding to linear sequences within the CD7 extracellular domains, by raising polyclonal anti-CD7 rabbit sera against these peptides, and by computer analysis of the primary CD7 amino acid sequence. Polyclonal anti-CD7 sera were studied using indirect immunofluorescence, RIA, radioimmunoprecipitation, and Western blot assays. Computer analysis was performed comparing the CD7 sequence with all other known protein sequences. We found that three CD7 epitopes defined by peptides CD7-1A (AA 1-38), CD7-4 (AA 48-74), and CD7-7 (AA 129-146) were available for binding antibody on the surface of the CD7 molecule. Using computer analysis, we transposed the amino acid sequence of the CD7 Ig kappa-like N-terminal domain of CD7 onto the spatial coordinates of REI, a previously reported Ig kappa-molecule highly homologous (48%) to the CD7 N-terminal Ig-like region. Based on computer analysis of this putative CD7 three-dimensional structure, both the CD7-1A and CD7-4 regions protruded from the surface of the N-terminal domain of the CD7 molecule. Finally, comparison of the CD7 transmembrane sequence with CD4 and HIV transmembrane sequences and with respiratory syncytial virus fusion sequences demonstrated similar sequence motifs among these molecules.     

Neurotoxicity of Prion Peptides Mimicking the Central Domain of the Cellular Prion Protein

The physiological functions of PrP^C remain enigmatic, but the central domain, comprising highly conserved regions of the protein may play an important role. Indeed, a large number of studies indicate that synthetic peptides containing residues 106–126 (CR) located in the central domain (CD, 95–133) of PrP^C are neurotoxic. The central domain comprises two chemically distinct subdomains, the charge cluster (CC, 95–110) and a hydrophobic region (HR, 112–133). The aim of the present study was to establish the individual cytotoxicity of CC, HR and CD. Our results show that only the CD peptide is neurotoxic. Biochemical, Transmission Electron Microscopy and Atomic Force Microscopy experiments demonstrated that the CD peptide is able to activate caspase-3 and disrupt the cell membrane, leading to cell death.     

Conformational studies of the C-terminal 16-amino-acid-residue fragment of the B3 domain of the immunoglobulin binding protein G from Streptococcus

The structure and stability of the 16-amino-acid-residue fragment [IG(46-61)] corresponding to the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus was investigated by means of CD and NMR spectroscopy and by differential scanning calorimetry. The CD and 2D NMR experiments were carried out (i) in water at different temperatures and (ii) at one temperature (305 K), with only CD, at different TFE concentrations. Our results show that the IG(46-61) peptide possesses organized three-dimensional structure at all investigated temperatures. The three-dimensional structure of the IG(46-61) peptide resembles the general shape of a beta-hairpin that is also observed for this peptide in the experimental structure of the B3 domain in the whole G protein; the structure is stabilized by hydrophobic interactions between nonpolar side chains. Our study shows that the melting temperature of the IG(46-61) peptide is about 320 K which supports the hypothesis that the investigated peptide can serve as a folding initiation site of the B3 domain of the immunoglobulin binding protein G.     

Structural model for the mannose receptor family uncovered by electron microscopy of Endo180 and the mannose receptor

The mannose receptor family comprises four members in mammals, Endo180 (CD280), DEC-205 (CD205), phospholipase A(2) receptor (PLA(2)R) and the mannose receptor (MR, CD206), whose extracellular portion contains a similar domain arrangement: an N-terminal cysteine-rich domain (CysR) followed by a single fibronectin type II domain (FNII) and 8-10 C-type lectin-like domains (CTLDs). These proteins mediate diverse functions ranging from extracellular matrix turnover through collagen uptake to homeostasis and immunity based on sugar recognition. Endo180 and the MR are multivalent transmembrane receptors capable of interacting with multiple ligands; in both receptors FNII recognizes collagens, and a single CTLD retains lectin activity (CTLD2 in Endo180 and CTLD4 in MR). It is expected that the overall conformation of these multivalent molecules would deeply influence their function as the availability of their binding sites could be altered under different conditions. However, conflicting reports have been published on the three-dimensional arrangement of these receptors. Here, we have used single particle electron microscopy to elucidate the three-dimensional organization of the MR and Endo180. Strikingly, we have found that both receptors display distinct three-dimensional structures, which are, however, conceptually very similar: a bent and compact conformation built upon interactions of the CysR domain and the lone functional CTLD. Biochemical and electron microscopy experiments indicate that, under a low pH mimicking the endosomal environment, both MR and Endo180 experience large conformational changes. We propose a structural model for the mannose receptor family where at least two conformations exist that may serve to regulate differences in ligand selectivity.     

Identification of novel splice variants of Adhesion G protein-coupled receptors

Alternative splicing is an important mechanism to generate proteome diversity in higher eukaryotic organisms. We searched for splice variants of the human Adhesion family of G protein-coupled receptors (GPCRs) using mRNA sequences and expressed sequence tags. The results presented here describe 53 human splice variants among the 33 Adhesion GPCRs. Many of these variants appear to be coding for "functional" proteins (29) while the others are seemingly "non-functional" (24). Novel functional splice variants were found for: CD97, CELR3, EMR2, EMR3, GPR56, GPR110, GPR112-GPR114, GPR116, GPR123-GPR126, GPR133, HE6, and LEC1-LEC3. Splice variants for GPR116, GPR125, GPR126, and HE6 were found conserved in other species. Several of the functional splice variants lack one or more of the functional domains that are found in the N-termini of these receptors. These functional domains are likely to affect ligand binding or interaction with other proteins and these novel splice variants may have important roles for the specificity of interactions between these receptors and extracellular molecules. Another type of splice variants found here lacks a GPCR proteolytic site (GPS). The GPS domain has been shown to be essential for the proteolytic cleavage of the receptors N-termini and for cellular surface expression. We suggest that these alternative splice variants may be crucial for the function of the receptors while the seemingly non-functional splice variants may be a part of a regulative mechanism.     

Autocrine regulation of T cell motility by calreticulin-thrombospondin-1 interaction

The mechanisms regulating T lymphocyte migration within the extracellular matrix are not understood. We show in this study that the thrombospondin-1 binding site of calreticulin, spanning aa 19-32, is a major triggering factor for T cell motility and migration within a three-dimensional collagen type 1 matrix, and that exogenous motogenic factors such as chemokines can stimulate migration via a calreticulin-thrombospondin-1 pathway. Endogenous calreticulin binding to the N-terminal domain of endogenous thrombospondin-1 elicited a motogenic signal to the T cells through the C-terminal domain of thrombospondin-1 and its cell surface receptor integrin-associated protein (CD47). Our data further revealed that thrombospondin-1 was expressed on the cell surface with a high turnover, and that PI3K and the Janus family of tyrosine kinases were required for T cell motility mediated through calreticulin, thrombospondin-1, and CD47. These results unveil an autocrine mechanism of calreticulin-thrombospondin-1-CD47 interaction for the control of T cell motility and migration within three-dimensional extracellular matrix substrata.     

Domain complementation studies reveal residues critical for the activity of the mannitol permease from Escherichia coli

This paper presents domain complementation studies in the mannitol transporter, EII^mtl, from Escherichia coli. EII^mtl is responsible for the transport and concomitant phosphorylation of mannitol over the cytoplasmic membrane. By using tryptophan-less EII^mtl as a basis, each of the four phenylalanines located in the cytoplasmic loop between putative transmembrane helices II and III in the membrane-embedded C domain were replaced by tryptophan, yielding the mutants W97, W114, W126, and W133. Except for W97, these single-tryptophan mutants exhibited a high, wild-type-like, binding affinity for mannitol. Of the four mutants, only W114 showed a high mannitol phosphorylation activity. EII^mtl is functional as a dimer and the effect of these mutations on the oligomeric activity was investigated via heterodimer formation (C/C domain complementation studies). The low phosphorylation activities of W126 and W133 could be increased 7-28 fold by forming heterodimers with either the C domain of W97 (IIC^mtlW97) or the inactive EII^mtl mutant G196D. W126 and W133, on the other hand, did not complement each other. This study points towards a role of positions 97, 126 and 133 in the oligomeric activation of EII^mtl. The involvement of specific residue positions in the oligomeric functioning of a sugar-translocating EII protein has not been presented before.