牛筋草离孺孢生物学特性及代谢产物活性测定

对牛筋草离孺孢属(Bipolaris sorokiniana)NJ-08菌株的生物学特性及代谢产物除草活性测定结果表明：此菌株的菌丝体生长速度慢, 但产孢量大, 致病性强。菌丝体生长最适温度25°C, 致死温度是55°C/10 min, 最适pH值为8, 碳源以葡萄糖最佳, 供试氮源则不利于菌丝体生长。产生分生孢子最适温度25°C, 最适pH值为8, 碳源以葡萄糖最好, 氮源以硝酸钠产孢量最高。分生孢子萌发温度在20°C~35°C之间没有差异, 适宜pH值为5~7, 碳源以D-木糖的孢子萌发率最高, 氮源以蛋白胨的孢子萌发率最高, 不同处理间存在明显差异。NJ-08菌株产生的代谢产物作用于牛筋草, 可使叶片黄化或枯死, 代谢产物对指示植物及杂草如柱花草、地桃花、猪屎豆和辣椒的胚根胚芽生长都有明显的抑制作用, 抑制率均超过了90%, 显示出很好的除草活性。     

高通量快速测定致病性及非致病性副溶血性弧菌最大比生长速率

【目的】比较15 °C、20 °C和25 °C时, 9株不同致病性与非致病性副溶血性弧菌菌株在TSB (3% NaCl, pH 8.0)中的最大比生长速率之间的差异。【方法】应用Bioscreen C全自动微生物生长曲线分析仪测定副溶血性弧菌的最大比生长速率。【结果】15 °C、 20 °C和25 °C时, 9株副溶血性弧菌菌株间最大比生长速率的变异系数分别为20.72%、17.5%和15.98%。不同副溶血性弧菌最大比生长速率之间的差异随着温度的降低而增加。【结论】在进行定量微生物风险评估时, 应用仅基于一株菌建立的生长预测模型会给预测结果带来较大的不确定性。需建立可描述不同副溶血性弧菌菌株的最大比生长速率的随机模型来为定量微生物风险评估提供更准确有效的预测模型。     

一株高效去除亚硝酸氮细菌的分离鉴定及其脱氮特性研究

【目的】从南美白对虾养殖塘中分离到高效去除亚硝酸氮的细菌, 对其分类和脱氮特性进行了研究。【方法】 以除亚硝酸氮为主要指标, 取养殖塘底层水样分离筛选菌株; 依据16S rRNA基因序列和生理生化特征初步鉴定菌株; 研究不同碳源、碳氮比、起始pH、温度、摇床转速和氯化钠浓度对反硝化除亚硝酸氮的影响, 并考查了菌株对硝酸氮和氨氮的利用情况。【结果】得到的菌株中菌株FP6活性最高, 初步鉴定菌株FP6属于地衣芽孢杆菌。菌株FP6的生长最适脱氮碳源为蔗糖, 菌株FP6去除亚硝酸氮有高活性的条件范围为: C/N值15?25、起始pH 7.0?10.0、温度20 °C?37 °C、摇床转速0?200 r/min和氯化钠浓度0?40 g/L。菌株FP6对硝酸氮和氨氮都有一定的去除能力, 利用硝酸氮时不积累亚硝酸氮。【结论】地衣芽孢杆菌FP6具有优良的除亚硝氮特性, 适宜的温度、pH和盐度范围较宽。     

四个类群海洋蛭弧菌类生物生长特性的比较

研究了噬菌弧菌科(Bacteriovoracaceae) 4个类群共12株海洋蛭弧菌类生物(Bdellovibrio- and-like organisms, BALOs)的生长温度和盐度范围及其对6种常见对虾病原弧菌的裂解能力, 并通过透射电镜分析了其中4个代表菌株的形态特征。结果表明, 同一群或亚群内菌株的生长温度或盐度相同, 即类群IV、VI、IX、X菌株的生长温度范围分别为20°C~35°C、15°C~35°C、15°C~ 40°C和10°C~40°C, 最适生长温度为30°C或35°C; 生长盐度范围分别为5‰~40‰、2.5‰~30‰、5‰~60‰和5‰~60‰, 最适生长盐度分别为10‰、5‰、20‰和20‰。测试的6种弧菌中有3种可被全部BALOs裂解, 而其它弧菌仅被部分BALOs裂解, 但即使同一类群菌株, 对某些弧菌也表现不同的裂解能力。形态上, 4株不同类群BALOs均呈典型的弧状细胞, 具极生单鞭毛。     

深海热液区超嗜热古菌Thermococcus sp. TVG2的培养分离与鉴定

【目的】培养分离大西洋脊热液区的超嗜热古菌,为进一步认识该生态系统中的物种及其特点奠定基础。【方法】将大西洋脊热液区海水样品用YTSV培养基富集培养,选取其中富集效果最佳的TVG2培养物用减绝稀释法分离纯化。对所分离菌株进行形态、生理生化特征等分析,并通过分子生物学手段对其进行初步鉴定。【结果】菌株TVG2属于超嗜热厌氧球菌,直径约1.0 μm;生长温度范围50?88 °C,最适生长温度82 °C;生长pH范围为5.0?9.0,最适生长pH 6.5;生长NaCl浓度为1.0%?4.0% (质量体积比),最适生长浓度为2.5%;元素硫可显著提高菌株TVG2的生物量,但非生长必需;丙酮酸钠能显著促进该菌株生长,但葡萄糖对其生长则有抑制作用。根据其形态特征、生理生化特性及16S rRNA基因序列分析,确定菌株TVG2属于热球菌属。【结论】用YTSV培养基从大西洋脊热液区样品中分离获得超嗜热厌氧菌株TVG2,并确定其为Thermococcus属成员,命名为Thermococcus sp. TVG2。     

一个可降解直链烷基苯磺酸盐的新种

本文鉴定了一株可完全降解直链烷基苯磺酸盐（Linear Alkylbenzene Sulphonate,简称LAS）的菌株GZ6。革兰氏染色阴性,细胞为杆状或短杆状,大小为0.5μm～0.8 μm×1.0μm～2.0 μm,其生长pH范围为pH6.0～10.0,最适生长pH为7.0,生长温度范围为4℃～40℃,最适生长温度为30℃。生化特征测定除过氧化氢酶、尿酶、精氨酸脱羧酶反应为阳性,其它均为阴性。可利用Chloridazon、安替比林（antipyrin）以及LAS等为碳源。不能利用大多数糖醇。醌组分以泛醌Q10为主。菌体脂肪酸主要为C18∶1、C16∶0及C16∶1。DNA中G+C mol％含量为7010。16S rRNA 序列分析表明菌株GZ6 与其亲缘关系最近的菌株Phenylobacterium immobile DSM1986T序列相似值为9749％,DNADNA杂交率为40%。菌株GZ6具极生鞭毛,可运动,两者在细胞形态有很大差异。故将菌株GZ6定为苯基杆菌属的新种可动苯基杆菌（Phenylobaterium mobile） GZ6。     

南极产低温脂肪酶菌株Psychrobacter sp. 7195 的 选育、发酵条件及酶学性质研究

从南极普里兹湾深海沉积物中筛选到一株产低温脂肪酶的菌株7195,细菌学形态鉴定及16S rDNA序列分析表明该菌株属于嗜冷杆菌属 (Psychrobacter). 生长特性研究表明该菌株属于耐冷菌,其最适生长温度范围为5～15°C, 7195菌株能利用多种碳、氮源产酶.粗酶液经硫酸铵盐析、DEAE cellulose-52 柱层析进行初步分离纯化后进行酶学性质的研究. 该菌株所分泌的脂肪酶最适作用温度为30°C,最适pH值为9.0,对热敏感,60°C热处理10min剩余酶活为30%,是典型的低温酶. Ca2+、Mn2+、Cu2+对该酶有较为明显的激活作用,而Co2+、Zn2+、Hg2+、Rb2+、Cd2+、Fe3+、EDTA则能抑制酶活,此外该脂肪酶能在高浓度的SDS、CHAPS、Triton X-100、Tween 80、Tween20等变性剂中表现出较好的稳定性.     

苹果炭疽菌低毒性菌株生物学特性的研究

研究了温度、pH值及碳源对苹果炭疽病菌(Colletotrichum gloeosporioides)强毒性菌株及低毒性菌株的生长、产孢和孢子萌发的影响。结果表明:菌丝生长温度范围10℃~35℃、最适温度为28℃,低毒菌株生长速率较快,产生分生孢子的温度范围与分生孢子萌发的温度范围为15℃~35℃,低毒菌株孢子萌发率较高,菌丝生长的最适pH值基本相同,pH在3~10的范围内均能生长和产孢,产生分生孢子的最适pH值为4~5,但经离子注入的低毒性菌株C100-2-5的产孢量在不同的pH值和温度下却一直低于经磁场处理的C0.25-1-2和强毒性菌株(对照)。分生孢子的致死温度为47℃、15 min或50℃、5 min。但菌丝的致死温度却不同,对照为60℃、20 min,C0.25-1-2为60℃、25 min,C100-2-5为60℃、30 min,65℃下5 min(及5 min以上)。     

一株轻度嗜盐反硝化细菌的分离鉴定和反硝化特性初探

从处理高盐度废水的成熟活性污泥中分离筛选得到1株轻度嗜盐反硝化细菌GYL, 通过对该菌株的形态观察、生理生化实验以及16S rDNA序列分析, 确定该菌株为盐单胞菌(Halomonas sp.)。该菌株能在盐度为10%的培养液中生长, 最适盐度为2%~7%, 最适pH为7.5~8.5, 最佳碳源为蔗糖, 在25°C~30°C的温度范围内脱氮效率达到80%以上。对该菌株的异养硝化能力进行了测定, 其对氨氮的去除率可达98.3%, 说明该菌株可实现同步硝化反硝化, 即该菌可以独立完成生物脱氮的全部过程。     

一株对硝基苯胺降解菌Microbacterium sp. PNA8的分离鉴定及其降解条件研究

从污泥中分离得到一株能以对硝基苯胺为唯一碳源、氮源和能源生长的细菌菌株PNA8。经过对其形态特征、生理生化特性、以及16S rRNA序列分析, 该菌株初步鉴定为Microbacterium sp.。进一步研究表明, 菌株PNA8利用对硝基苯胺生长和降解的最适温度和pH分别是30°C和7.0。培养基中添加定量酵母膏有利于菌株的生长及其对对硝基苯胺的降解。最适条件下, 在培养液中添加0.4 g/L酵母膏, 4 d内0.3 mmol/L对硝基苯胺降解率可达100%。     

一株硫酸盐还原菌的分离鉴定及生物学特性研究

从处理硫酸盐废水厌氧折流板反应器（Anaerobic battqe reactor,ABR）的污泥中分离到1株硫酸盐还原菌,对该菌株进行了形态、生理生化特性方面的研究,并对16S rDNA序列进行了分析。该菌株为杆状或弧状,大小为（0．5～0．7）μm×（1．4～1．9）μm,革兰染色阴性,芽胞染色阴性,能运动,具有硫酸盐还原功能。菌株最适生长pH为7．0～8．0,喜中性偏碱环境;初始[SO4^2-]为2000mg／L,OD600nm。值为1．206,SO4^2-去除率达到71％;该菌株能分别利用乳酸、丙酮酸、丁酸、乙酸、乙醇、甲醇、葡萄糖作为电子供体,进行硫酸盐异化还原,乳酸最有利于该菌SO4^2-的去除,SO4^2-去除率为91．4％,其次为丙酮酸,达到51．2％。基于16SrDNA序列同源性构建了系统发育树,结果表明此株菌是属于脱硫弧菌属（Desulfovibrio）的硫酸盐还原菌,与Desulfovibrio具有96．0％的序列相似性。     

Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.

An anaerobic, rod-shaped, mesophilic, chemolithoautotrophic, sulfate-reducing bacterial strain IOR2T was isolated from a newly found deep-sea hydrothermal vent (OVF, Onnuri Vent Field) area in the central Indian Ocean ridge (11°24′88″ S 66°25′42″ E, 2021 m water depth). The 16S rRNA gene sequence analysis revealed that the strain IOR2T was most closely related to Desulfovibrio senegalensis BLaC1T (96.7%). However, it showed low similarity with the members of the family Desulfovibrionaceae, such as Desulfovibrio tunisiensis RB22T (94.0%), D. brasiliensis LVform1T (93.9%), D. halophilus DSM 5663T (93.7%), and Pseudodesulfovibrio aespoeensis Aspo-2T (93.2%). The strain IOR2T could grow at 23–42°C (optimum 37°C), pH 5.0–8.0 (optimum pH 7.0) and with 0.5–6.5% (optimum 3.0%) NaCl. The strain could use lactate, pyruvate, H2, and glycerol as electron donors and sulfate, thiosulfate, and sulfite as electron acceptors. The major fatty acids of the strain IOR2T were iso-C15:0, iso-C17:0, ante-iso-C15:0, and summed feature 9 (C16:0 methyl/iso-C17:1ω9c). Both the strains IOR2T and BLaC1T could grow with CO2 and H2 as the sole sources of carbon and energy, respectively. Genomic evidence for the Wood-Ljungdahl pathway in both the strains reflects chemolithoautotrophic growth. The DNA G + C content of the strain IOR2T and BLaC1T was 58.1–60.5 mol%. Based on the results of the phylogenetic and physiologic studies, Paradesulfovibrio onnuriensis gen. nov., sp. nov. with the type strain IOR2T (= KCTC 15845T = MCCC 1K04559T) was proposed to be a member of the family Desulfovibrionaceae. We have also proposed the reclassification of D. senegalensis as Paradesulfovibrio senegalensis comb. nov.     

Rubrerythrin and rubredoxin oxidoreductase in Desulfovibrio vulgaris: a novel oxidative stress protection system

Evidence is presented for an alternative to the superoxide dismutase (SOD)-catalase oxidative stress defense system in Desulfovibrio vulgaris (strain Hildenborough). This alternative system consists of the nonheme iron proteins, rubrerythrin (Rbr) and rubredoxin oxidoreductase (Rbo), the product of the rbo gene (also called desulfoferrodoxin). A Deltarbo strain of D. vulgaris was found to be more sensitive to internal superoxide exposure than was the wild type. Unlike Rbo, expression of plasmid-borne Rbr failed to restore the aerobic growth of a SOD-deficient strain of Escherichia coli. Conversely, plasmid-borne expression of two different Rbrs from D. vulgaris increased the viability of a catalase-deficient strain of E. coli that had been exposed to hydrogen peroxide whereas Rbo actually decreased the viability. A previously undescribed D. vulgaris gene was found to encode a protein having 50% sequence identity to that of E. coli Fe-SOD. This gene also encoded an extended N-terminal sequence with high homologies to export signal peptides of periplasmic redox proteins. The SOD activity of D. vulgaris is not affected by the absence of Rbo and is concentrated in the periplasmic fraction of cell extracts. These results are consistent with a superoxide reductase rather than SOD activity of Rbo and with a peroxidase activity of Rbr. A joint role for Rbo and Rbr as a novel cytoplasmic oxidative stress protection system in D. vulgaris and other anaerobic microorganisms is proposed.     

海洋细菌Bacillus sp．HN07的分离鉴定及所产碱性纤维素酶性质研究

从渤海海域（121°30′00″E,40°25′00″N）海泥中筛选到一株产碱性纤维素酶的海洋细菌。通过形态观察、生理生化特性及16SrDNA序列分析,鉴定该菌株属于芽孢杆菌属（Bacillus）,命名为Bacillussp．HN07。研究表明：HN07最适生长温度30℃,适宜在pH7．0～8．0、含2．0％～3．0％NaCl的培养条件下生长和产酶,并且具有较好的遗传稳定性。酶学性质初步研究显示,HN07所产碱性纤维素酶最适反应温度为45℃,最适pH为8．0,在碱性条件下具有较好的稳定性,具有潜在的工业应用价值。     

The pH dependence of proton-deuterium exchange, hydrogen production and uptake catalyzed by hydrogenases from sulfate-reducing bacteria

Different patterns have been found in the pH dependence of hydrogenase activity with enzymes purified from different species of Desulfovibrio. With the cytoplasmic hydrogenase from Desulfovibrio baculatus strain 9974, the pH optima in H2 production and uptake were respectively 4.0 and 7.5 with a higher activity in production than in uptake. The highest D2-H+ exchange activity was found also at pH 4.0 but the optima differed for the HD and the H2 components. Both similarly rose when the pH decreased from 9.0 to 4.5, but the rate of H2 evolution slowed whereas the HD evolution continued rising till pH values around 3.0 were reached. The H2 to HD ratio at pH above 4.5 was higher than one. With the periplasmic hydrogenase from Desulfovibrio vulgaris Hildenborough, the highest exchange activity was near pH 5.5, the same value as in hydrogen production. The periplasmic hydrogenase from Desulfovibrio gigas had in contrast the same pH optimum in the exchange (7.5-8.0) as in the H2 uptake. The ratio of H2 to HD was below one for both enzymes. These different patterns may be related to functional and structural differences in the three hydrogenases so far studied, particularly in the composition of their catalytic centers.     

利用微藻固定烟道气中CO2的实验研究

为获得能适合于烟道气条件下生长的微藻,找到一种高效的温室气体固定的方法,利用配置烟道气(CO₂和O₂的浓度分别为15%和2%)驯化稻田微藻混合试样,分离出对高浓度CO₂条件有很强适应力的微藻ZY-1,并研究了在不同培养条件下微藻ZY-1的生长情况.微藻ZY-1在CO₂浓度从10%～15%的范围内有较高生长力,在CO₂浓度为10%时,生长最好.微藻ZY-1对温度、气体流速、pH值等物理条件也有很宽的适应范围,在温度为25～30.C、流速为0.25～0.75L·min^-1、pH4～6范围内,生长基本稳定.在培养条件为10%CO₂、25.C、pH5.0时,微藻ZY-1的生长率最高,CO₂的固定率平均值为0.397%.可以认为,利用该藻固定烟道气温室气体具有一定的可行性.     

Bacillus pumilus XJU-13的分离鉴定及其碱性脂肪酶酶学特性分析

目的:对从新疆精河地区一处工业污水中分离得到的一株产碱性脂肪酶细菌进行研究.方法:通过生理生化检测,16SrDNA序列同源性分析和G+Cmol%含量的测定对命名为XJU-13的这株菌进行鉴定.结果:该菌株可在pH 3.0～12.5的广泛酸碱泛围的营养肉汤培养基中生长.最适生长温度为37℃.基于16S rDNA序列同源性构建系统进化树分析表明与Bacillus pumilus clone B257聚在同一亚分枝,序列相似性达100%.数据证明XJU-13属于Bacillus pumilus.由于在氧化酶反应及淀粉水解实验与伯杰氏鉴定手册有差异,具不可比拟的pH耐受性,且脂肪酸含量与参考菌株差异较大,认为这是Bacillus pumilus中的一个新品系.该菌株产生的脂肪酶最适pH为10,最适温度为35℃,且在广泛pH(pH4-10)范围具稳定性.酶活可被Mg2+、K+、Ba2+、Pb+盐强烈抑制,被Ca2+、Cu2+、Al+及Fe2+盐激活.Zn2+对酶活无影响.结论:实验表明,XJU-13应属于B.pumilus.B.pumilus XJu-13中分离到的碱性脂肪酶有很好的特性及潜能,以期为工业应用提供数据.     

Molecular study and partial characterization of iron-only hydrogenase in Desulfovibrio fructosovorans

An iron-only hydrogenase was partially purified and characterized from Desulfovibrio fructosovorans wild-type strain. The enzyme exhibits a molecular mass of 56 kDa and is composed of two distinct subunits HydA and HydB (46 and 13 kDa, respectively). The N-terminal amino acid sequences of the two subunits of the enzyme were determined with the aim of designing degenerate oligonucleotides. Direct and inverse polymerase chain reaction techniques were used to clone the hydrogenase encoding genes. A 9-nucleotide region located 75 bp upstream from the translational start codon of the D. fructosovorans hydA gene was found to be highly conserved. The analysis of the deduced amino acid sequence of these genes showed the presence of a signal sequence located in the small subunit, exhibiting the consensus sequence which is likely to be involved in the specific export mechanism of hydrogenases. Two ferredoxin-like motives involved in the coordination of [4Fe-4S] clusters were identified in the N-terminal domain of the large subunit. The amino acid sequence of the [Fe] hydrogenase from D. fructosovorans was compared with the amino acid sequences from eight other hydrogenases (cytoplasmic and periplasmic). These enzymes share an overall 18% identity and 28% similarity. The identity reached 73% and 69% when the D. fructosovorans hydrogenase sequence was compared with the hydrogenase sequences from Desulfovibrio vulgaris Hildenborough and Desulfovibrio vulgaris oxamicus Monticello, respectively.     

一株具有良好粘附性的植物乳杆菌的生物学特性及应用

本文研究了植物乳杆菌AR326的最适生长温度、最适接种量、生长曲线、最适初始pH、胆汁耐受性、NaCl耐受性,并进一步探究了单菌株发酵酸奶的性能。结果显示植物乳杆菌AR326生长较快,4 h进入对数期,14 h进入稳定期,最适生长温度为30℃,在初始pH 3.0~7.0范围可生长,适宜的接种量为1.5%~2.0%,耐受胆盐浓度达0.2%,耐高渗透压能力强,可在含NaCl 8%的MRS培养基中生长。发酵乳中菌落数和对照组一致,脱水收缩性优于对照组,因而可用于商业上生产功能性酸奶。     

Functional expression of Desulfovibrio vulgaris Hildenborough cytochrome c3 in Desulfovibrio desulfuricans G200 after conjugational gene transfer from Escherichia coli.

Plasmid pJRDC800-1, containing the cyc gene encoding cytochrome c3 from Desulfovibrio vulgaris subsp. vulgaris Hildenborough, was transferred by conjugation from Escherichia coli DH5 alpha to Desulfovibrio desulfuricans G200. The G200 strain produced an acidic cytochrome c3 (pI = 5.8), which could be readily separated from the Hildenborough cytochrome c3 (pI = 10.5). The latter was indistinguishable from cytochrome c3 produced by D. vulgaris subsp. vulgaris Hildenborough with respect to a number of chemical and physical criteria.