The influence of mesh size in environmental quality assessment of estuarine macrobenthic communities

The Water Framework Directive (WFD) strengthened the need for environmental quality assessment with rapid and accurate results. Studies of estuarine benthic macrofauna communities often use 0.5-mm mesh sieves in samples processing. However, this represents a considerable increase in sampling and identification effort compared to the use of 1-mm mesh sieves. Therefore, it is relevant to determine if mesh size matters in environmental quality assessments.The objectives of this study were as follows: (i) to test whether sieves with different mesh sizes provided different environmental status assessments in transitional systems, (ii) to compare the performance of different ecological indicators based on data from 0.5- and 1-mm mesh sieves and (iii) to compare the costs involved in using these two mesh sizes.Data were collected in the fall of 2007 and winter of 2008 at four sampling stations located in the Mondego Estuary, Portugal. The relative performance of Margalef and Shannon–Wiener indices, AMBI—AZTI Marine Biotic Index, Pielou, Eco-Exergy and Specific Eco-Exergy indices was analysed. Additionally, the multimetric Benthic Assessment Tool (BAT) was applied. The samples from the 1-mm mesh sieve were processed 2.9 times faster than the samples from the 0.5-mm mesh sieves. As expected, the density, biomass and number of species retained in the 0.5-mm mesh sieve were significantly higher in both seasons than the density, biomass and number of species retained in the 1-mm mesh sieve. All indicators were significantly different for the two mesh sizes in at least one season. The Pielou index was significantly different for the two mesh sizes in both seasons. Most indices showed that the 0.5-mm mesh sieve captured more information from the study system. The first BAT analysis provided different Ecological Quality Status (EQS) assessments for the two mesh sizes. To use the EQS obtained from the 1-mm mesh sieve as a proxy for the EQS for the 0.5-mm mesh sieve, further modifications were done in terms of reference conditions and class boundary thresholds. Regarding the Mondego Estuary, the use of a 1-mm mesh sieve appeared to be advantageous on routine environmental quality assessment, giving unbiased results with relatively less effort. Nevertheless, the methodology needs further validation and additional tests.     

What does geometric mean,mean geometrically? Assessing the utility of geometric mean and other size variables in studies of skull allometry

This study investigated the effects of using different size variables for interpretations of relative orbit size and mandibular robusticity. Thirty-three skull measurements taken on 385 platyrrhines representing 12 of 16 New World monkey genera (in addition to body mass and total body length) were used singly and in combinations (by taking the geometric mean of all measurements) as size variables to produce relative size indices of orbit area and mandibular thickness. These indices were then compared to investigate which size variables proved effective at differentiating nocturnal from diurnal taxa and hard object from soft object feeders based upon results from previous biomechanical studies. It was found that certain groups of size variables consistently produced the a priori expectations and resulted in lower coefficients of variation. The general principles shared by these size variables were that they sampled anatomically remote regions of the skull that appear to be functionally independent from the trait being evaluated and they were nearly always geometric mean combinations composed of a relatively high number (>or=12) of large measurements. Suggestions are also presented for amending these principles for use with incomplete material such as fossils.     

Application of Rapid Bioassessment Protocols (RBP) for benthic macroinvertebrates in Brazil: comparison between sampling techniques and mesh sizes

This study is part of the effort to test and to establish Rapid Bioassessment Protocols (RBP) using benthic macroinvertebrates as indicators of the water quality of wadeable streams in south-east Brazil. We compared the cost-effectiveness of sampling devices frequently used in RBPs, Surber and Kick-net samplers, and of three mesh sizes (125, 250 and 500 microm). A total of 126,815 benthic macroinvertebrates were collected, representing 57 families. Samples collected with Kick method had significantly higher richness and BMWP scores in relation to Surber, but no significant increase in the effort, measured by the necessary time to process samples. No significant differences were found between samplers considering the cost/effectiveness ratio. Considering mesh sizes, significantly higher abundance and time for processing samples were necessary for finer meshes, but no significant difference were found considering taxa richness or BMWP scores. As a consequence, the 500 microm mesh had better cost/effectiveness ratios. Therefore, we support the use of a kick-net with a mesh size of 500 microm for macroinvertebrate sampling in RBPs using family level in streams of similar characteristics in Brazil.     

城市胁迫生境下二球悬铃木叶片的发育稳定度及其环境指示功能

对采自上海市区14个样点的二球悬铃木叶片发育稳定度、叶片气孔密度和气孔长径进行研究。结果表明,在3个采样时期,根据叶片宽度确定的非稳态不对称指数(FA1)和根据叶片侧脉长度确定的偏向性不对称指数(RDA1)在不同环境胁迫程度(UESL)下均表现出显著的差异,但进一步分析表明,各样点FA1与环境胁迫程度UESL之间呈显著的非线性回归关系,而RDA1与环境胁迫程度之间却未显示类似关系。此外,FA1与叶片气孔密度和气孔长径之间的显著相关关系表明,它们可共同作为指示小尺度上环境胁迫的有效指标,而RDA1是叶片的一种正常发育状态参数,并不适于反映环境胁迫状态。     

Microvariation in the fauna of a sublittoral sand bank,Moreton Bay,Queensland

Benthic macrofauna was sampled from Naval Reserve Bank, Moreton Bay, Queensland, using an 0.05 m² van Veen grab, and data were used to investigate spatial micropatterning. Samples were taken within a 5 × 6 square sampling grid (total area 730 in2) with an intersampling distance of 6 m. Samples were taken in duplicate on each occasion at 2-inonth intervals. Particle size of sediments and depth data were also collected. Data on other abiotic factors such as temperature, salinity and currents were inferred. Sampling gave data for 131 species. Hierarchical numerical classificatory techniques were employed to obtain (a) spatial patterns (site-groups) based on biotic data, and (b) species-groups which characterize the above site groups. Species diversity (SH) species richness (S), species evenness (J’) and individual species diversity (I) indices were computed for the total data set for each site with the species summated over the sampling times. A selected number of species were used in the classification. The spatial patterns were well defined but the species-groups categorizing them were somewhat confused. Species diversity indices were found to be of little aid in the interpretation of the site patterns or in generating alternative hypotheses.     

Effect of drift sampler exposure time and net mesh size on invertebrate drift density in the Njoro River,Kenya

Although invertebrate drift is an important ecological process in lotic ecosystems, very little is known about it in Kenyan rivers. The primary aim of this study was to investigate the effect of driftnet mesh size and exposure duration on drift density in 2017. Drift samples were dominated by Chironomidae, Baetidae, Simuliidae, Caenidae and Culicidae. The 100 µm mesh driftnet had the highest mean invertebrate density, followed by the 250 µm and 500 µm nets. Invertebrate drift densities decreased with increased exposure time. This study demonstrates that sampler mesh size and exposure time should be taken into account when characterising invertebrate drift in streams. Future studies should consider sampling different biotopes and during different seasons.     

插网网目尺寸及采样时间对潮沟游泳动物采样的影响

在长江河口九段沙盐沼湿地的一条潮沟中,我们比较了两种不同网目尺寸（4mm和8mm）的插网（fyke net）及日夜潮对游泳动物群落采样效率的影响。共捕获鱼类16种5476尾、虾2种4982只。采用方差分析、柯尔莫诺夫-斯米尔诺夫非参数检验法和无度量多维标定分析对两种网目插网的捕获效率,样品的体长分布,群落结构及日夜潮间的差异进行了分析。结果表明,网目尺寸对样品中游泳动物的物种数和鱼类的多度没有影响,但是小网目的插网对虾类有较高的捕获率。两种网目尺寸的插网均在夜潮中捕获较多的鱼类个体,但虾类在日潮捕获较多。在日潮中,网目尺寸对捕获物中五种优势游泳动物的体长分布无显著影响。在夜间,小网目的插网对斑尾复缎虎和脊尾白虾的较大个体具有较高的捕获率,但对较大个体鲅的捕获率不如大网目的插网。样品中游泳动物的群落组成在日夜潮间存在明显差异,大网目捕获物的样本间差异比小网目小。     

鱼类早期资源调查中不同网具采集效率的研究

用网目为0.500和0.776mm的筛绢分别制成长度为1.5、2.0和2.5m的弶网、圆锥网和纺锤形网,采用网箱式、滤过式集苗桶和非滤过式集苗桶3种集苗器,于1998年5-6月在长江九江江段进行了采集仔鱼效果的比较研究。结果显示,弶网采集的数量最少,纺锤形网采集的数量最多。不同长度网具采集的数量没有显著差异,但长度为1.5m的圆锥网所采集仔鱼的规格明显小于长度为2.0和2.5m圆锥网所采集的。用网口面积分别为0.38m~2和0.20m~2的圆锥网组与不同类型集苗器进行比较,所采集仔鱼的数量和规格均没有差异。不同网目网具所采集仔鱼的数量没有显著差异,但网目为0.500mm圆锥网所采集仔鱼的平均规格显著小于网目为0.776mm圆锥网的。综合比较,以网目为0.500mm的纺锤形网的采样误差较小。     

A critical assessment of standard processing methods for the preparation of palynological samples

Standard processing techniques for the isolation of organic walled dinoflagellate cysts from geological samples are examined, with particular attention to the size and type of sieve mesh used. Variations within the ‘standard’ processing techniques used by different laboratories are identified, and an assessment of the retention capacities of meshes of different sizes and different materials is carried out. Some dinoflagellate cysts and large numbers of Lycopodium spores, used for the calculations of absolute abundance data, were found to pass through 20 μm meshes. This is due to a combination of factors including: the diagonal aperture diameter of a 20 μm mesh measuring over 28 μm; the three-dimensional properties of different mesh weaves (nylon and polyester); and the non-spherical shape of the particles. Experiments demonstrate that the maximum mesh size that should be used in palynological processing is 15 μm. Nylon mesh is more practical to use than polyester as processing time is reduced, but nylon is degraded by contact with acid solutions. Meshes with apertures < 15 μm may be used, though this may be impractical for large samples containing significant quantities of fine siliciclastic or organic material.     

Assessing the multicomponent aspect of coral fish diversity: The impact of sampling unit dimensions

The influence of variations in sampling unit dimensions on the assessment of fish species structuring has been widely documented. However, this issue has been restricted to a very limited range of community and population indices (mainly species richness and density). Here, we have investigated this issue through the analysis of 13 diversity indices related to 3 diversity components (number of species, evenness and functional diversity). We analyzed a large set of 257 standardized underwater visual census (UVC) transects dealing with 254 coral fish species. The sensitivity of the indices to the variation in sampling unit dimensions was studied by comparing a range of 55 couples of transect length and width representing 34 sampling surfaces. We found that the extent and profile of the sensitivity to changes in transect dimensions strongly varied both from one index to another and from one dimension to another (length and width). The most sensitive indices were more strongly impacted by variation in length than width. We also showed that for a fixed transect surface, the couple of chosen length and width may alter the assessment of indices related to each of the three main diversity components studied. Some widely used diversity indices, such as species richness and Shannon index, appeared to be very sensitive to changes in transect length and width. In contrast, while still very little used in coral fish studies, two functional diversity indices (FDiv, FEve), and to a lesser extent an evenness index (Berger–Parker), remained robust in the face of change in sampling dimensions. By showing that the variation in sampling dimensions (length, width and surface) may impact diversity indices in a contrasting manner, we stress the need to take into account the sensitivity of the indices to this criterion in the process of selection of the indices to be analyzed in diversity studies. Finally, we found that 30 m long*5 m wide transects might be a suitable compromise size for assessing the patterns of each of the three major complementary components of coral fish diversity.     

三峡库区消落带外来植物入侵与景观基质组成结构的关联性

外来物种入侵过程不仅受入侵地生境的影响,也受到周边景观基质的影响.厘清景观基质对外来入侵物种的影响,对于外来物种的入侵管控具有重要意义.本研究针对长江三峡库区消落带植物群落开展调查,评估三峡库区消落带外来植物入侵现状;在岸线以上(含消落带)2000 m范围内划分出10个景观格局尺度,采用14个指标分析景观基质组成结构;...     

Mesh-size effects on drift sample composition as determined with a triple net sampler

Nested nets of three different mesh apertures were used to study mesh-size effects on drift collected in a small mountain stream. The innermost, middle, and outermost nets had, respectively, 425 µm, 209 µm and 106 µm openings, a design that reduced clogging while partitioning collections into three size groups. The open area of mesh in each net, from largest to smallest mesh opening, was 3.7, 5.7 and 8.0 times the area of the net mouth. Volumes of filtered water were determined with a flowmeter. The results are expressed as (1) drift retained by each net, (2) drift that would have been collected by a single net of given mesh size, and (3) the percentage of total drift (the sum of the catches from all three nets) that passed through the 425 µm and 209 µm nets. During a two day period in August 1986, Chironomidae larvae were dominant numerically in all 209 µm and 106 µm samples and midday 425 µm samples. Large drifters (Ephemerellidae) occurred only in 425 µm or 209 µm nets, but the general pattern was an increase in abundance and number of taxa with decreasing mesh size. Relatively more individuals occurred in the larger mesh nets at night than during the day. The two larger mesh sizes retained 70% of the total sediment/detritus in the drift collections, and this decreased the rate of clogging of the 106 µm net. If an objective of a sampling program is to compare drift density or drift rate between areas or sampling dates, the same mesh size should be used for all sample collection and processing. The mesh aperture used for drift collection should retain all species and life stages of significance in a study. The nested net design enables an investigator to test the adequacy of drift samples.     

Assessing Species Distribution Using Google Street View: A Pilot Study with the Pine Processionary Moth

Mapping species spatial distribution using spatial inference and prediction requires a lot of data. Occurrence data are generally not easily available from the literature and are very time-consuming to collect in the field. For that reason, we designed a survey to explore to which extent large-scale databases such as Google maps and Google street view could be used to derive valid occurrence data. We worked with the Pine Processionary Moth (PPM) Thaumetopoea pityocampa because the larvae of that moth build silk nests that are easily visible. The presence of the species at one location can therefore be inferred from visual records derived from the panoramic views available from Google street view. We designed a standardized procedure allowing evaluating the presence of the PPM on a sampling grid covering the landscape under study. The outputs were compared to field data. We investigated two landscapes using grids of different extent and mesh size. Data derived from Google street view were highly similar to field data in the large-scale analysis based on a square grid with a mesh of 16 km (96% of matching records). Using a 2 km mesh size led to a strong divergence between field and Google-derived data (46% of matching records). We conclude that Google database might provide useful occurrence data for mapping the distribution of species which presence can be visually evaluated such as the PPM. However, the accuracy of the output strongly depends on the spatial scales considered and on the sampling grid used. Other factors such as the coverage of Google street view network with regards to sampling grid size and the spatial distribution of host trees with regards to road network may also be determinant.     

In and out: Effects of shoot- vs. rooted-presence sampling methods on plant diversity measures in mountain grasslands

Plant diversity measures (e.g., alpha- and beta-diversity) provide the basis for a number of ecological indication and monitoring methods. These measures are based on species counts in sampling units (plots or quadrats). However, there are two alternative conventions for defining a vascular plant species as “present” in a plot, i.e. “shoot presence” (a species is recorded if the vertical projection of any above-ground part falls within the plot) and “rooted presence” (a species is recorded only when an individual is rooted inside the plot). Very few studies addressed the effects of the two sampling conventions on species richness and diversity indices. We sampled mountain dry grasslands in Italy across different plot sizes and vegetation types to assess how large is the difference in alpha- and beta-diversity values and in sample-based rarefaction curves between the two methods. We found that the difference is greatly dependent on plot size, being more relevant, both in absolute and percentage values, at smaller grain; it is also dependent on habitat type, being larger in shallow-soil communities, as they have a sparser vegetation structure and host life-form types with a larger lateral spread. At fine spatial scales (<1 m²) the difference is large enough to bias statistical inference, and we conclude that at such scales one should not attempt to compare plant diversity indices if they were not obtained with the same sampling convention.     

Length-weight relationships for 15 fish species in the East China Sea mainly captured by the commercial fishery and subelemented by survey samples

Length-weight relationships (LWRs) were presented for 15 fish species which caught in the East China Sea during 2009–2014. All of the samples were caught by commercial and scientific survey bottom trawl vessels. The commercial fishery survey used one-single bottom trawl with the smallest mesh size 25 cm and light seine fishing with the smallest mesh size 38 cm, however, the scientific survey only used one-single bottom trawl with the smallest mesh size 20 cm. The length and weight of all the fish were measured to the nearest millimeter and milligram, respectively. The application of these estimated values should be limited to the studied waters and observed length ranges. The development and adoption of a standardized sampling format for all studies aiming to determine LWRs should be undertaken.     

Functionally independent components of prey capture are architecturally constrained in spider orb webs

Evolutionary conflict in trait performance under different ecological contexts is common, but may also arise from functional coupling between traits operating within the same context. Orb webs first intercept and then retain insects long enough to be attacked by spiders. Improving either function increases prey capture and they are largely determined by different aspects of web architecture. We manipulated the mesh width of orbs to investigate its effect, along with web size, on prey capture by spiders and found that they functioned independently. Probability of prey capture increased with web size but was not affected by mesh width. Conversely, spiders on narrow-meshed webs were almost three times more likely to capture energetically profitable large insects, which demand greater prey retention. Yet, the two functions are still constrained during web spinning because increasing mesh width maximizes web size and hence interception, while retention is improved by decreasing mesh width because more silk adheres to insects. The architectural coupling between prey interception and retention has probably played a key role in both the macroevolution of orb web shape and the expression of plasticity in the spinning behaviours of spiders.     

The effect of sieve mesh size on the abundance and composition of macrophyte-associated macrofaunal assemblages

Sampling efficiency of several sieve mesh sizes (2, 1, 0.5, 0.2 and 0.1 mm) was tested in invertebrate assemblages associated to Sargassum stenophyllum. Samples of this brown algae were collected in southeastern Brazil to determine whether different sampling devices resulted in differences on the abundance and composition of the macrofauna. The 1 and 2 mm mesh sizes sampled less organisms, resulting in smaller abundances, densities, number of species and diversity, when compared to the other three mesh sizes, that achieved similar results. The most efficient sieve was the 0.5 mm mesh, sampling 85.8% and 94.5% of gammaridean and caprellidean amphipods, respectively, and 93.1% of gastropods. However, polychaetes and isopods were best sampled with the 0.2 mm sieve. Our results suggest that caution should be exercised when deciding on which sieve to use, as mesh sizes commonly used in benthic studies (1 and 0.5 mm) may result in very different estimates of diversity and abundance, as well as community structure patterns. This revised version was published online in July 2006 with corrections to the Cover Date.     

Biomass and Abundance Biases in European Standard Gillnet Sampling

The European Standard EN 14757 recommends gillnet mesh sizes that range from 5 to 55mm (knot-to-knot) for the standard monitoring of fish assemblages and suggests adding gillnets with larger mesh sizes if necessary. Our research showed that the recommended range of mesh sizes did not provide a representative picture of fish sizes for larger species that commonly occur in continental Europe. We developed a novel, large mesh gillnet which consists of mesh sizes 70, 90, 110 and 135mm (knot to knot, 10m panels) and assessed its added value for monitoring purposes. From selectivity curves obtained by sampling with single mesh size gillnets (11 mesh sizes 6 – 55mm) and large mesh gillnets, we identified the threshold length of bream (Abramis brama) above which this widespread large species was underestimated by European standard gillnet catches. We tested the European Standard gillnet by comparing its size composition with that obtained during concurrent pelagic trawling and purse seining in a cyprinid-dominated reservoir and found that the European Standard underestimated fish larger than 292mm by 26 times. The inclusion of large mesh gillnets in the sampling design removed this underestimation. We analysed the length-age relationship of bream in the Římov Reservoir, and concluded that catches of bream larger than 292mm and older than five years were seriously underrepresented in European Standard gillnet catches. The Římov Reservoir is a typical cyprinid-dominated water body where the biomass of bream > 292mm formed 70% of the pelagic trawl and purse seine catch. The species-specific relationships between the large mesh gillnet catch and European Standard catch suggested that the presence of carp (Cyprinus carpio), European catfish (Silurus glanis), tench (Tinca tinca) or bream warrants the use of both gillnet types. We suggest extending the gillnet series in the European Standard to avoid misinterpretation of fish community biomass estimates.     

基于植物-地形关系的物种丰富度空间格局预测——GAMs途径的一种应用

将基于样本调查数据的群落-生境因子回归分析与GIS支持下的植物属性空间格局预测结合起来,是国际上植被-环境关系定量研究的新途径。通用可加性模型（GAM）的非参数属性使之具有对不同数据类型的广泛适应性,成为这种“回归分析＋空间预测”途经的有效手段;不同程度上依赖于数字高程模型的环境空间数据集是实现空间预测的必要条件。介绍了这一新的研究途径,并应用于案例研究区域植物多样性指标空间格局的预测和分析。野外调查的一组样方地形特征指标和植物多样性指标（包括样方物种丰富度及乔木、灌木、草本、常绿木本、珍稀种类的丰富度）,分别作为预测变量和响应变量,建立GAM模型。结合研究区域10m分辨率的数字高程模型,对该区域植物物种丰富度的空间格局进行空间预测,并对预测模型和结果进行统计分析和检验。结果表明：（1）不同的多样性指标具有不同的模型结构和模拟效果,重复模拟的结果稳定性也不同,反映了所受地形因子影响的差异;（2）影响各多样性指标空间格局的地形变量主要是坡位和坡度等小尺度特征,大尺度海拔因素的影响并不显著;（3）模拟结果与独立检验数据的相关分析表明,对乔木种、草本种、珍稀种的模拟全部有效;对常绿种和样方物种总数的模拟部分有效;而对灌木种丰富度的预测基本失败。（4）模型预测变量有效性和全面性决定了模型对数据的解释能力,样本大小对模型的稳定性和可靠性也有显著影响。就地形因子对生境条件的代表性、模拟误差的来源及GAMs模型的优缺点和应用前景进行了讨论。