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Karen S Conrad Jennifer M Hurley Joanne Widom Carol S Ringelberg Jennifer J Loros Jay C Dunlap Brian R Crane 《The EMBO journal》2016,35(15):1707-1719
In the Neurospora crassa circadian clock, a protein complex of frequency (FRQ), casein kinase 1a (CK1a), and the FRQ‐interacting RNA Helicase (FRH) rhythmically represses gene expression by the white‐collar complex (WCC). FRH crystal structures in several conformations and bound to ADP/RNA reveal differences between FRH and the yeast homolog Mtr4 that clarify the distinct role of FRH in the clock. The FRQ‐interacting region at the FRH N‐terminus has variable structure in the absence of FRQ. A known mutation that disrupts circadian rhythms (R806H) resides in a positively charged surface of the KOW domain, far removed from the helicase core. We show that changes to other similarly located residues modulate interactions with the WCC and FRQ. A V142G substitution near the N‐terminus also alters FRQ and WCC binding to FRH, but produces an unusual short clock period. These data support the assertion that FRH helicase activity does not play an essential role in the clock, but rather FRH acts to mediate contacts among FRQ, CK1a and the WCC through interactions involving its N‐terminus and KOW module. 相似文献
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Wei Wang Jinyao Ouyang Yating Li Changsheng Zhai Bing He Huahan Si Kunsong Chen Jocelyn K. C. Rose Wensuo Jia 《植物学报(英文版)》2024,66(6):1106-1125
It is generally accepted that jasmonate-ZIM domain (JAZ) repressors act to mediate jasmonate (JA) signaling via CORONATINE-INSENSITIVE1 (COI1)-mediated degradation. Here, we report a cryptic signaling cascade where a JAZ repressor, FvJAZ12, mediates multiple signaling inputs via phosphorylation-modulated subcellular translocation rather than the COI1-mediated degradation mechanism in strawberry (Fragaria vesca). FvJAZ12 acts to regulate flavor metabolism and defense response, and was found to be the target of FvMPK6, a mitogen-activated protein kinase that is capable of responding to multiple signal stimuli. FvMPK6 phosphorylates FvJAZ12 at the amino acid residues S179 and T183 adjacent to the PY residues, thereby attenuating its nuclear accumulation and relieving its repression for FvMYC2, which acts to control the expression of lipoxygenase 3 (FvLOX3), an important gene involved in JA biosynthesis and a diverse array of cellular metabolisms. Our data reveal a previously unreported mechanism for JA signaling and decipher a signaling cascade that links multiple signaling inputs with fruit trait development. 相似文献
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J. Holt C. Pavis M. Marquier T. C. B. Chancellor C. Urbino N. Boissot 《Agricultural and Forest Entomology》2008,10(1):61-67
1 In two experiments carried out in Guadeloupe, barriers were used to reduce the entry of the virus vector Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) to tomato plots. The barriers erected around the crop were of insect‐proof cloth fences (<50 mesh), 1.5 m in height, in the first experiment with a deltamethrin‐treated, insect‐attracting strip facing inwards, and, in the second, with the barrier but no insecticide‐treated strip. 2 A mathematical model of epidemic development was fitted to the symptom data from the treated and control (unprotected) tomato plots. There were two viruses present, tomato yellow leaf curl and potato yellow mosaic; specific detection confirmed that symptoms gave an accurate indication of infection and that the two virus diseases had similar progress curves. 3 Parameter estimates obtained by model‐fitting suggested that the barriers reduced vector immigration by approximately 12‐fold but that B. tabaci retention within the plots was also increased slightly despite the mortality caused by the insecticide‐treated strips. Disease establishment was delayed by approximately 2 weeks. The results obtained in the second experiment involving barriers deployed without insecticide‐treated strips could be explained by a large increase in B. tabaci retention within the barriers resulting in more rapid virus disease progress than in controls. The results of mathematical modelling indicate that partial insect barriers can be worse than none because sufficient whiteflies can enter to establish a population and, at the same time, large numbers are retained in the barrier plot, with the net effect being a more rapid population increase than in the absence of barriers. 相似文献
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Chuyu Lin Chenghao Lan Xiaoxiao Li Wei Xie Fucheng Lin Yan Liang Zeng Tao 《植物学报(英文版)》2024,66(9):2042-2057
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Swint-Kruse L Elam CR Lin JW Wycuff DR Shive Matthews K 《Protein science : a publication of the Protein Society》2001,10(2):262-276
The repressor proteins of the LacI/GalR family exhibit significant similarity in their secondary and tertiary structures despite less than 35% identity in their primary sequences. Furthermore, the core domains of these oligomeric repressors, which mediate dimerization, are homologous with the monomeric periplasmic binding proteins, extending the issue of plasticity to quaternary structure. To elucidate the determinants of assembly, a structure-based alignment has been created for three repressors and four periplasmic binding proteins. Contact maps have also been constructed for the three repressor interfaces to distinguish any conserved interactions. These analyses show few strict requirements for assembly of the core N-subdomain interface. The interfaces of repressor core C-subdomains are well conserved at the structural level, and their primary sequences differ significantly from the monomeric periplasmic binding proteins at positions equivalent to LacI 281 and 282. However, previous biochemical and phenotypic analyses indicate that LacI tolerates many mutations at 281. Mutations at LacI 282 were shown to abrogate assembly, but for Y282D this could be compensated by a second-site mutation in the core N-subdomain at K84 to L or A. Using the link between LacI assembly and function, we have further identified 22 second-site mutations that compensate the Y282D dimerization defect in vivo. The sites of these mutations fall into several structural regions, each of which may influence assembly by a different mechanism. Thus, the 360-amino acid scaffold of LacI allows plasticity of its quaternary structure. The periplasmic binding proteins may require only minimal changes to facilitate oligomerization similar to the repressor proteins. 相似文献
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Amalia Bar-Ziv Yael Levy Hagit Hak Anahit Mett Eduard Belausov Vitaly Citovsky Yedidya Gafni 《Plant signaling & behavior》2012,7(8):983-989
The V2 protein of Tomato yellow leaf curl geminivirus (TYLCV) is an RNA-silencing suppressor that counteracts the innate immune response of the host plant. However, this anti-host defense function of V2 may include targeting of other defensive mechanisms of the plant. Specifically, we show that V2 recognizes and directly binds the tomato CYP1 protein, a member of the family of papain-like cysteine proteases which are involved in plant defense against diverse pathogens. This binding occurred both in vitro and in vivo, within living plant cells. The V2 binding site within mCYP1 was identified in the direct proximity to the papain-like cysteine protease active site. 相似文献
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The plant SNF1-related kinase (SnRK1) is the α-subunit of the SnRK1 heterotrimeric compleses. Although SnRK1 is widely known as a key regulator of plant response to various physiological processes including nutrient- and energy-sensing, regulation of global metabolism, and control of cell cycle, development, as well as abiotics stress, less is known about the function of SnRK1 during pathogen infection. Our previous work has demonstrated that a tomato SNF1-related kinase (SlSnRK1) can interact with and phosphorylate βC1, a pathogenesis protein encoded by tomato yellow leaf curl China betasatellite. Our results also showed that the plant SnRK1 can affect genimivirus infection in plant and reduce viral DNA accumulation. Phosphorylation of βC1 protein negatively impacts its function as a pathogenicity determinant. Here we provide more information on interaction between βC1 and SlSnRK1 and propose a mechanistic model for the SlSnRK1-mediated defense responses against geminiviruses and the potential role of SnRK1 in plant resistance to geminivirus. 相似文献
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Gustavo W. Fernandes Barbara M.L.C. Bocco Tatiana L. Fonseca Elizabeth A. McAninch Sungro Jo Lattoya J. Lartey InSug O-Sullivan Terry G. Unterman Nailliw Z. Preite Robin M. Voigt Christopher B. Forsyth Ali Keshavarzian Richárd Sinkó Allison B. Goldfine Mary E. Patti Miriam O. Ribeiro Balázs Gereben Antonio C. Bianco 《Cell reports》2018,22(2):523-534
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P. M. Mullineaux J. Donson J. Stanley M. I. Boulton B. A. M. Morris-Krsinich P. G. Markham J. W. Davies 《Plant molecular biology》1985,5(2):125-131
Summary The amino acid sequences of the putative polypeptides of maize streak virus (MSV) have been systematically compared with those of cassava latent virus (CLV) and tomato golden mosaic virus (TGMV) using the programme DIAGON (8).Conserved sequences have been detected between peptides encoded by the complementary (-) sense of MSV and those of CLV and TGMV, viz; the 40 200 Mr polypeptide of CLV-1 (3) and the 40 285 Mr polypeptide of TGMV-A (4) show extensive homologies with the 17 768 Mr and 31 388 Mr polypeptides of MSV (6).Distant and variable homologies have been detected between the putative coat protein of MSV when compared with those of CLV and TGMV. No other relationships between the potential gene products of MSV and those of CLV and TGMV have been detected.The extensive homologies detected between the complementary sense encoded peptides suggest that they are derived from functional genes, and that the directly conserved sequences may contain amino acids essential to the function of these proteins. The less extensive homologies among the putative coat proteins are considered in relation to their possible structures and functions. 相似文献
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萜类吲哚生物碱（terpeniod indole alkaloids, TIAs）是植物中产生的一类具有药理活性的次生代谢产物.药用植物长春花（Catharanthus roseus）因含有长春碱和长春新碱等重要的抗肿瘤萜类吲哚生物碱而成为研究TIAs次生代谢的主要模式植物.应用正、反向遗传学和各种代谢组学技术对长春花TIAs次生代谢途径及其调控进行了较深入的研究,相继鉴定了参与TIAs代谢途径调控的CrORCAs、CrMYCs、CrZCTs和CrWRKYs等转录因子,特别是发现茉莉素（jasmonates, JAs）介导TIAs生物合成的转录调控网络. 本文以长春花TIAs生物合成途径为模式,重点论述其代谢途径中的关键酶、参与调节的转录因子,尤其是茉莉素介导的调控网络及机制,解析植物中这些天然抗癌生物碱合成积累水平低的制约因素和组织细胞特异性,讨论基于这些新知识的长春花抗肿瘤TIAs代谢工程策略和工厂化绿色生产前景. 相似文献
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