Mechano-Chemical Aspects of Organ Formation in Arabidopsis thaliana: The Relationship between Auxin and Pectin

How instructive signals are translated into robust and predictable changes in growth is a central question in developmental biology. Recently, much interest has centered on the feedback between chemical instructions and mechanical changes for pattern formation in development. In plants, the patterned arrangement of aerial organs, or phyllotaxis, is instructed by the phytohormone auxin; however, it still remains to be seen how auxin is linked, at the apex, to the biochemical and mechanical changes of the cell wall required for organ outgrowth. Here, using Atomic Force Microscopy, we demonstrate that auxin reduces tissue rigidity prior to organ outgrowth in the shoot apex of Arabidopsis thaliana, and that the de-methyl-esterification of pectin is necessary for this reduction. We further show that development of functional organs produced by pectin-mediated ectopic wall softening requires auxin signaling. Lastly, we demonstrate that coordinated localization of the auxin transport protein, PIN1, is disrupted in a naked-apex produced by increasing cell wall rigidity. Our data indicates that a feedback loop between the instructive chemical auxin and cell wall mechanics may play a crucial role in phyllotactic patterning.     

EVOLUTIONARY-DEVELOPMENTAL CHANGE IN THE GROWTH ARCHITECTURE OF FOSSIL RHIZOMORPHIC LYCOPSIDS: SCENARIOS CONSTRUCTED ON CLADISTIC FOUNDATIONS

The Rhizomorphales, the most derived portion of the lycopsid (clubmoss) Glade, is now represented only by the diminutive genus Isoetes. However, during their Late Palaeozoic acme the rhizomorphic lycopsids exhibited a wide range of architectures and body sizes, from recumbent pseudoherbs to trees 40 m high. All possessed the rhizomorphic syndrome: a centralized rootstock and secondary thickening, reflecting an inescapable developmental constraint of bipolar determinate growth. These features in turn allowed acquisition of the tree habit by the lycopsids, independently of the physiologically and ontogenetically distinct lignophyte Glade that includes the seed-plants. Differences among lycopsid genera in the number and size of four major growth modules – rhizomorph, stem, lateral branches (two positionally distinct submodules), and isotomous crown branches – resulted from differences in the relative size, number and equality of dichotomies of the apical meristems. A detailed experimental cladistic analysis of the best known fossil rhizomorphic lycopsids demonstrates extensive iteration among several distinct growth architectures characterizing ten genera. Scenarios can be constructed for the type of morphogenetic transitions necessary to (1) derive one genus from a putative ancestor or (2) explain the relationship of two genera relative to a putative outgroup. The scenarios are best formulated within a synthesis of terminology devised primarily by zoologists to describe via size–shape trajectories various modes of evolutionary–developmental change: heterotopy, heterochrony sensu lato, and allometric modifications. Many examples of these phenomena are evident among the rhizomorphic lycopsids, and can be explored by reconstructing hypothetical ancestors occupying interior nodes of the cladogram. Iterative origination of the small-bodied genera from tree-sized ancestors is inferred, by various forms of paedomorphosis and decreases in the number of developmental stages that are sufficiently profound to locally perturb perceived phylogenetic relationships. This study highlights several problems of cladistic analysis in general and of fossils in particular, especially the significance for character polarization of both perceived primitiveness and large phenetic gaps. Many phylogenetic studies of several extant angiosperm clades also imply frequent architectural transitions, but few suggest repeated origins of non-trees from trees. A simple model for control of development focuses on D-genes: switches that control morphogen production. This perspective emphasizes the importance of a series of inter-related hierarchies reflecting ontogenetic time, size, burden and complexity within species, and phylogeny among species. The increasingly evident simplicity and common origin of D-gene control in all living organisms is used to formulate a neoGoldschmidtian paradigm of instantaneous, non-adaptive, saltational speciation via teratological ‘hopeful monsters’ that escape the constraints of developmental canalization. The scenario does not require large-scale mutations or high levels of fitness in the mutants - merely temporary release from competitive selection by establishing the new lineage in a vacant niche. The model is more appropriate to higher plants than to the more developmentally complex and constrained higher animals, and more appropriate to fossil plants than to their more ecologically complex and developmentally constrained living descendants. Future progress in understanding transitions in plant form requires reciprocal illumination between such scenarios and empirical observations of gene expression analyzed in a cladistic context.     

An Ethylene-Mediated Increase in Sensitivity to Auxin Induces Adventitious Root Formation in Flooded Rumex palustris Sm

The hormonal regulation of adventitious root formation induced by flooding of the root system was investigated in the wetland species Rumex palustris Sm. Adventitious root development at the base of the shoot is an important adaptation to flooded conditions and takes place soon after the onset of flooding. Decreases in either endogenous auxin or ethylene concentrations induced by application of inhibitors of either auxin transport or ethylene biosynthesis reduced the number of adventitious roots formed by flooded plants, suggesting an involvement of these hormones in the rooting process. The rooting response during flooding was preceded by increased endogenous ethylene concentrations in the root system. The endogenous auxin concentration did not change during flooding-induced rooting, but a continuous basipetal transport of auxin from the shoot to the rooting zone appeared to be essential in maintaining stable auxin concentrations. These results suggest that the higher ethylene concentration in soil-flooded plants increases the sensitivity of the root-forming tissues to endogenous indoleacetic acid, thus initiating the formation of adventitious roots.     

THE RHIZOMORPH APEX OF PAURODENDRON; IMPLICATIONS FOR HOMOLOGIES AMONG THE ROOTING ORGANS OF LYCOPSIDA

A rhizomorph of Paurodendron with an intact apex recently has been discovered in Upper Pennsylvanian sediments of Ohio, and this provides the anatomical evidence necessary to interpret structure, ontogeny and homologies among lycophyte rooting organs. The basal meristem of Paurodendron is radial and lenticular, and produces an apical plug of parenchymatous tissue similar to a root cap. The plug is surrounded by a furrow associated with radially aligned cells that demonstrate a developmental correspondence to the furrow(s) of Isoetes. Based on external structural similarities at the rhizomorph apices of Paurodendron, Stigmaria, and young Nathorstiana, and on the anatomical similarities of Paurodendron to Isoetes, Stigmaria, Chaloneria, and Lepidocarpon embryos, all are interpreted as having a rooting organ that represents a modified shoot system that is fundamentally unlike the primary root system of seed plants. Likewise, the rootlets of rhizomorphic lycophytes are interpreted as leaves modified for rooting, and that have the equivalent of exogenous origin. As such, they are fundamentally unlike the adventitious roots of rhizomatous lycophytes like Lycopodium and Selaginella.     

Involvement of auxin and CKs in boron deficiency induced changes in apical dominance of pea plants (Pisum sativum L.)

It has previously been shown that boron (B) deficiency inhibits growth of the plant apex, which consequently results in a relatively weak apical dominance, and a subsequent sprouting of lateral buds. Auxin and cytokinins (CKs) are the two most important phytohormones involved in the regulation of apical dominance. In this study, the possible involvement of these two hormones in B-deficiency-induced changes in apical dominance was investigated by applying B or the synthetic CK CPPU to the shoot apex of pea plants grown in nutrient solution without B supply. Export of IAA out of the shoot apex, as well as the level of IAA, Z/ZR and isopentenyl-adenine/isopentenyl-adenosine (i-Ade/i-Ado) in the shoot apex were assayed. In addition, polar IAA transport capacity was measured in two internodes of different ages using 3H-IAA. In B-deficient plants, both the level of auxin and CKs were reduced, and the export of auxin from the shoot apex was considerably decreased relative to plants well supplied with B. Application of B to the shoot apex restored the endogenous Z/ZR and IAA level to control levels and increased the export of IAA from the shoot apex, as well as the 3H-IAA transport capacity in the newly developed internodes. Further, B application to the shoot apex inhibited lateral bud growth and stimulated lateral root formation, presumably by stimulated polar IAA transport. Applying CPPU to the shoot apex, a treatment that stimulates IAA export under adequate B supply, considerably reduced the endogenous Z/ZR concentration in the shoot apex, but had no stimulatory effect on IAA concentration and transport in B-deficient plants. A similar situation appeared to exist in lateral buds of B-deficient plants as, in contrast to plants well supplied with B, application of CKs to these plants did not stimulate lateral bud growth. In contrast to the changes of Z/ZR levels in the shoot apex, which occurred after application of B or CPPU, the levels of i-Ade/i-Ado stayed more or less constant. These results suggest that there is a complex interaction between B supply and plant hormones, with a B-deficiency-induced inhibition of IAA export from the shoot apex as one of the earliest measurable events.     

Hormones and Apical Dominance in the Fern Davallia

Lateral buds of the fern Davallia trichomanoides are releasedfrom inhibition by the removal of the main shoot apex. However,auxin is not capable of substituting for the apex in decapitatedshoots nor can auxin in shoot tips be detected by bioassay orextraction and chromatography. Expanding leaves of this speciescontain auxin, but these organs are not responsible for inhibitionof lateral bud growth. The response of lateral buds to an exogenouslyapplied cytokinin does not result in initial bud break. It isconcluded that the hormonal factors known to govern apical dominancein seed plants are not responsible for the regulation of differentialbud expansion in this fern.     

STEM-ROOT TRANSITION OF AN UPPER PENNSYLVANIAN WOODY LYCOPSID

Anatomically preserved specimens of a woody lycopsid showing the transition from the stem to the rooting region are described from the Upper Pennsylvanian Duquesne Coal of Ohio. Specimens have exarch protosteles that are apparently medullated at distal levels and exhibit abundant secondary xylem. Cortical tissues accompanying the stems have periderm, and show leaf bases or cushions. Although features of the stems are compatible with those of the arborescent Lepidodendrales, the plants have a rounded cormose rooting region, rather than the much-branched and elongated stigmarian system usually associated with the order. Specimens of this type expand our knowledge of the diversity among Paleozoic lycopsids and document the occurrence of representatives with an Isoetes-like base in Pennsylvanian strata.     

Transport of exogenous auxin in two-branched dwarf pea seedlings (Pisum sativum L.)

Dwarf pea plants bearing two cotyledonary shoots were obtained by removing the epicotyl shortly after germination, and the patterns of distribution of ¹⁴C in these plants was investigated following the application of [¹⁴C]IAA to the apex of one shoot. Basipetal transport to the root system occurred, but in none of the experiments was ¹⁴C ever detected in the unlabelled shoot even after transport periods of up to 48 h. This was true both of plants with two equal growing shoots and of plants in which one shoot had become correlatively inhibited by the other, and in the latter case applied whether the dominant or subordinate shoot was labelled. In contrast, when [¹⁴C]IAA was applied to a mature foliage leaf of one shoot transfer of ¹⁴C to the other shoot took place, although the amount transported was always low. Transport of ¹⁴C from the apex of a subordinate shoot on plants bearing one growing and one inhibited shoot was severely restricted compared with the transport from the dominant shoot apex, and in some individual plants no transport at all was detected. Removal of the dominant shoot apex rapidly restored the capacity of the subordinate shoot to transport apically-applied [¹⁴C]IAA, and at the same time led to rapid cambial development and secondary vascular differentiation in the previously inhibited shoot. Applications of 1% unlabelled IAA in lanolin to the decapitated dominant shoot maintained the inhibition of cambial development in the subordinate shoot and its reduced capacity for auxin transport. These results are discussed in relation to the polarity of auxin transport in intact plants and the mechanism of correlative inhibition.Abbreviations IAA Indol-3-yl-acetic acid - TIBA 2,3,5-triiodobenzoic acid - 2,4D 2,4-dichlorophenoxyacetic acid - IAAsp Indol-3-yl-acetyl aspartic acid     

Effects of boron starvation on boron compartmentation, and possibly hormone-mediated elongation growth and apical dominance of pea (Pisum sativum) plants

Two experiments were carried out to study the effects of boron (B) deficiency on 7-day-old pea plants for 6 or 9 days under controlled growth chamber conditions. Growth and apical dominance (AD) of the plants and their B concentration and compartmentation were followed throughout the starvation period. Additionally, auxin (indoleacetic acid, IAA) concentration in the shoot apex and polar transport from it were measured along with the cytokinin (CK) concentration in the shoot apex and the roots. The results demonstrate that during a 6-day B-deficiency period, B concentration in the water-insoluble residue of the roots was very stable and could not easily be reduced. In contrast, B concentration in the cell sap fraction was very sensitive to external B supply. Twelve hours after transferring the plants from B-sufficient to B-deficient solutions, the B concentration in root cell sap declined to half the concentration of the control plants. In addition, B concentration in the new aerial plant parts, which developed after the onset of the B-deficiency treatment, was extremely low. A decline in elongation growth could be observed as soon as about 4 days after the imposition of B deficiency. This preceded the first measurable growth of lateral buds (release from AD). Before the onset of these morphological changes, there was a considerable decline in CK concentration, accompanied by a dramatic decrease in IAA export out of the shoot apex, a decline in IAA concentration in the shoot apex and the roots and a reduced capacity for polar IAA-transport. These changes are discussed as possible reasons for the observed reduction in elongation growth and AD. These hormonal changes themselves are possibly the result of the decreased symplasmic B concentration, which in turn may be responsible for the reduced concentration in apical CKs. A sequence of events, which may be causally related, is suggested to explain the effects of B deficiency on the growth and AD of pea plants.     

Regulatory role of auxin in adventitious root formation in two species of Rumex,differing in their sensitivity to waterlogging

Adventitious rooting in Rumex plants, in which the root systems were in hypoxic conditions, differed considerably between two species. R. palustris, a species from frequently flooded river forelands, developed a large number of adventitious roots during hypoxia, whereas adventitious root formation was poor in R. thyrsiflorus, a species from seldom flooded dykes and river dunes. Adventitious rooting could also be evoked in aerated plants of both species by application of auxin (1-naphthaleneacetic acid or indoleacetic acid) to the leaves. The response to auxin was dose-dependent, but even high auxin doses could not stimulate R. thyrsiflorus to produce as many adventitious roots as R. palustris. Consequently, the difference between the species in the amount of adventitious root formation was probably genetically determined, and not a result of a different response to auxin. A prerequisite for hypoxia-induced adventitious root formation is the basipetal transport of auxin within the shoot, as specific inhibition of this transport by N-1-naphthylphthalamic acid severely decreased the number of roots in hypoxia-treated plants. It is suggested that hypoxia of the root system causes stagnation of auxin transport in the root system. This can lead to an accumulation of auxin at the base of the shoot rosette, resulting in adventitious root formation.     

Hormone-mediated regulative action of the sunflower shoot apex on growth and cation level in the cotyledons: an additional manifestation of apical control

Decapitation of the shoot apex of seedlings of Helianthus annuus Lin. above the cotyledonary node brought about promotion of growth in the cotyledons. Potassium level in the cotyledons of decapitated plants was higher, and that of sodium lower, than in those of intact plants. IAA applied to the cut stem surface imitated the effects of the apex. Application of kinetin to the cotyledons antagonized the apex or the auxin in their influence on growth and cation level. Labeled IAA applied to the cut stem surface penetrated into the cotyledons in significant amounts. It was concluded that growth and monovalent cation level in the cotyledons are regulated by auxin released from the shoot apex and that at least part of the auxin effect is exerted directly in the cotyledons. A function of the apex as a sink for cytokinins may also be involved in the control mechanism.     

A Late Devonian isoetalean lycopsid, Otzinachsonia Beerboweri, gen. et sp. nov., from north-central Pennsylvania, USA

Compressions and impressions of an isoetalean lycopsid, comprising lower portions of stems, lobed bases, attached rootlets, and rounded rootlet scars, discovered in Late Devonian (Famennian) rocks of Clinton County, north-central Pennsylvania, Appalachian Basin, USA, are here described as Otzinachsonia beerboweri, gen. et sp. nov. These specimens demonstrate unequivocally the existence of the isoetalean lobe-and-furrow rhizomorphic growth pattern as early as the Late Devonian. They were found in an Archaeopteris- and Rhacophyton-dominated flora at Red Hill, an outcrop of the Duncannon Member of the Catskill Formation. The fossils were found in a dark-gray to greenish-gray lenticular siltstone layer that has an average thickness of 1.0 m. This deposit is interpreted as a floodplain pond. The low-energy nature of the deposit and the fine preservation of the intact rootlets of the specimens imply little or no transport. The plants were probably growing along the edge of the floodplain pond with their lower portions submerged for at least part of the year.     

Auxin distribution and transport during embryogenesis and seed germi-nation of Arabidopsis

INTRODUCTIONAuxin plays an important role in regu1ating celldivision, e1ongation and differentiatiou, vascular tis-sue fOrmation[1], pollen deve1opment[2] and 1eafyhead fOrmation[3]. Adrin polar transport is be-1ieved to invohe in a variety of important growthand developmenial processes, including the patternfOrmation of eInbryO, leaf morphogenesis and theroot gravity response[4--8]. Auxin po1ar transportinhibitor has been proved essential illterference ofataln transport leading to patte…     

Growth Regulators in Populus tremula IV. Apical Dominance and Suckering in Young Plants

Experiments with small plants of Populus tremula L. growing in solution culture indicate that polarly transported auxin is an important factor in the control of axillary bud growth. If the auxin supply from the growing apex is eliminated, the number of buds released is influenced by factors translocated in the transpiration stream from the roots. Suckers may be induced to develop from aspen roots, the age of which is six weeks or more. Removal of the growing apex and the axillary buds or stoppage of shoot growth by short day treatment were effective in inducing abundant suckering in small aspen plants. Some mature leaves had to be maintained, indicating the dependence of sucker formation on carbohydrate supply. These treatments are known to decrease auxin production in the shoots. Extraction and biological assay showed a decrease in the content of auxin in the roots as a consequence of removal of growing shoot parts. The results indicate that suckering in roots of intact aspen plants is prevented by auxin transported into the roots from growing shoot parts.     

The fall and rise of apical dominance

The plant hormone auxin, synthesised in the shoot apex, moves down the stem and inhibits lateral branching. Auxin does not travel upward into the branches, so it must act indirectly; for example, through a second messenger. However, recent work on auxin transport suggests a possible additional mechanism whereby auxin transport in the stem prevents the establishment of auxin transport out of the branches, inhibiting their growth.     

The role of auxin and sugar signaling in dominance inhibition of inflorescence growth by fruit load

Dominance inhibition of shoot growth by fruit load is a major factor that regulates shoot architecture and limits yield in agriculture and horticulture crops. In annual plants, the inhibition of inflorescence growth by fruit load occurs at a late stage of inflorescence development termed the end of flowering transition. Physiological studies show this transition is mediated by production and export of auxin from developing fruits in close proximity to the inflorescence apex. In the meristem, cessation of inflorescence growth is controlled in part by the age-dependent pathway, which regulates the timing of arrest. Here, we show the end of flowering transition is a two-step process in Arabidopsis (Arabidopsis thaliana). The first stage is characterized by a cessation of inflorescence growth, while immature fruit continues to develop. At this stage, dominance inhibition of inflorescence growth by fruit load is associated with a selective dampening of auxin transport in the apical region of the stem. Subsequently, an increase in auxin response in the vascular tissues of the apical stem where developing fruits are attached marks the second stage for the end of flowering transition. Similar to the vegetative and floral transition, the end of flowering transition is associated with a change in sugar signaling and metabolism in the inflorescence apex. Taken together, our results suggest that during the end of flowering transition, dominance inhibition of inflorescence shoot growth by fruit load is mediated by auxin and sugar signaling.

Dominance inhibition of inflorescence shoot growth by fruit load involves auxin and sugar signaling during the end of flowering transition.     

Nicotine synthesis in Nicotiana tabacum L. induced by mechanical wounding is regulated by auxin

The effects of different kinds of mechanical wounding on nicotine production in tobacco plants were compared, with sand or hydroponics culture under controlled conditions. Both removal of the shoot apex and damage of the youngest unfolded leaves nos 1 and 2 by a comb-like brusher with 720 punctures caused an increase in nicotine concentration in whole plants at day 3, and reached its highest level at day 6. The nicotine concentration induced by excision of the shoot apex was much higher than that induced by leaf wounding. Both treatments also caused an increase in jasmonic acid (JA) concentration within 90 min in the shoot, followed by an increase in the roots (210 min), in which the JA concentration induced by leaf wounding was significantly higher than that induced by excision of the shoot apex. The increase in nicotine concentration occurred throughout the whole plant, especially in the shoot, while the increase in JA concentration in the shoot was restricted to the damaged tissues, and was not observed in the adjacent tissues. Removal of the lateral buds that emerged after excision of the shoot apex caused a further increase in nicotine concentrations in the plant tissues. Removal of mature leaves, however, did not cause any changes in nicotine concentration in the plant, even though the degree of wounding in this case was comparable with that occurring with apex removal. The results suggest that the nicotine production in tobacco plants was not correlated with the degree of wounding (cut-surface or punctures), but was highly dependent on the removal of apical meristems and hence on the major sources of auxin in the plant. Furthermore, immediate application of 1-naphthylacetic acid (NAA) on the cut surface after removing the shoot apex completely inhibited the increase both in nicotine in whole plants and in JA in the damaged stem segment and roots. Application of an auxin transport inhibitor around the stem directly under the shoot apex of intact plants also caused an increase in nicotine concentration in the whole plant. The results strongly suggest that auxin serves as a negative signal to regulate nicotine synthesis in roots of tobacco plants.     

Auxin Effects on Vascular Differentiation in Ostrich Fern

Surgical experiments have confirmed the capacity of a fern shootapex to give rise to a mature vascular system in the absenceof leaves When the shoot apex of Matteuccia struthiopteris Todwas isolated by vertical incisions and incipient leaf pnmordiawere suppressed systematically for more than 5 weeks, a maturesiphonostele with reduced diameter and uninterrupted by leafgaps replaced the normal dictyostele If one or two leaf primordiawere allowed to develop, a transitional stele with one or twogaps was formed To test the possible role of the leaf primordiaas an auxin source, IAA in anion exchange beads was used toreplace the suppressed leaf primordia in experimental apicesThis treatment resulted in the formation of parenchymatous regionssimulating leaf gaps with an increase in stelar diameter Thisresponse contrasts with the well known promotion of vasculardifferentiation by auxin in seed plants Auxin, vascular differentiation, stele, shoot apex, Matteuccia struthiopteris     

Strigolactone Can Promote or Inhibit Shoot Branching by Triggering Rapid Depletion of the Auxin Efflux Protein PIN1 from the Plasma Membrane

Plants continuously extend their root and shoot systems through the action of meristems at their growing tips. By regulating which meristems are active, plants adjust their body plans to suit local environmental conditions. The transport network of the phytohormone auxin has been proposed to mediate this systemic growth coordination, due to its self-organising, environmentally sensitive properties. In particular, a positive feedback mechanism termed auxin transport canalization, which establishes auxin flow from active shoot meristems (auxin sources) to the roots (auxin sinks), has been proposed to mediate competition between shoot meristems and to balance shoot and root growth. Here we provide strong support for this hypothesis by demonstrating that a second hormone, strigolactone, regulates growth redistribution in the shoot by rapidly modulating auxin transport. A computational model in which strigolactone action is represented as an increase in the rate of removal of the auxin export protein, PIN1, from the plasma membrane can reproduce both the auxin transport and shoot branching phenotypes observed in various mutant combinations and strigolactone treatments, including the counterintuitive ability of strigolactones either to promote or inhibit shoot branching, depending on the auxin transport status of the plant. Consistent with this predicted mode of action, strigolactone signalling was found to trigger PIN1 depletion from the plasma membrane of xylem parenchyma cells in the stem. This effect could be detected within 10 minutes of strigolactone treatment and was independent of protein synthesis but dependent on clathrin-mediated membrane trafficking. Together these results support the hypothesis that growth across the plant shoot system is balanced by competition between shoot apices for a common auxin transport path to the root and that strigolactones regulate shoot branching by modulating this competition.