Genetic effects of chronic habitat fragmentation revisited: Strong genetic structure in a temperate tree, Taxus baccata (Taxaceae), with great dispersal capability

Tree species are thought to be relatively resistant to habitat fragmentation because of their longevity and their aptitude for extensive gene flow, although recent empirical studies have reported negative genetic consequences, in particular after long-term habitat fragmentation in European temperate regions. Yet the response of each species to habitat loss may differ greatly depending on their biological attributes, in particular seed dispersal ability. In this study, we used demographic and molecular data to investigate the genetic consequences of chronic habitat fragmentation in remnant populations of Taxus baccata in the Montseny Mountains, northeast Spain. The age structure of populations revealed demographic bottlenecks and recruitment events associated with exploitation and management practices. We found a strong genetic structure, both at the landscape and within-population levels. We also detected high levels of inbreeding for a strictly outcrossing species. Chronic forest fragmentation resulting from long-term exploitation in the Montseny Mountains seems the most plausible explanation for the strong genetic structure observed. Our results support the view that, contrary to some predictions, tree species are not buffered from the adverse effects of habitat fragmentation, even in the case of species with a high dispersal potential.     

Facilitation by nurse plants contributes to vegetation recovery in human-disturbed desert ecosystems

Aims Facilitation by nurse plants is a common interaction in harsh environments and this positive plant–plant interaction may promote vegetation recovery in ecosystems affected by human activities. Determining the relevance of this process, however, requires assessing how nurse plants influence the establishment of other species, as well as the proportion of species in the regional species pool that would benefit from the presence of nurse plants in human-disturbed areas. Further, since vegetation recovery is a time-dependent process, the community-level consequences of facilitation are likely to vary among landscapes with different disturbance history. Thus, an integrative perspective of the relevance of nurse plants for vegetation recovery could be obtained by measuring their effects across different human-disturbed landscapes of the target region. This study focuses on these issues and uses a regional-scale approach to assess the community-level effects of a widespread nurse plant of American deserts, the creosotebush (Larrea tridentata).Methods This study was conducted in the southernmost portion of Chihuahuan Desert because most floodplain valleys of this region have been affected by human activities during the past centuries. For this study, we selected 10 floodplain valleys differing in their age (i.e. the time elapsed after human activities were ceased). At each landscape, we measured the cover of creosotebushes and the proportion of plant species positively associated with them, as well as the density of seeds in the soil beneath creosotebush canopies. All these data were regressed against the age of the landscapes. Further, to assess whether positive association patterns were due to facilitation or other processes, we conducted field experiments and measured the ecophysiological performance of plant species established beneath and outside creosotebush canopies.Important findings Most plant species from the target region were positively associated to creosotebushes, and our field experiments and ecophysiological measures indicated that these distribution patterns can be attributed to facilitative interactions. In most landscapes, the density of seeds was higher beneath creosotebushes than in the surrounding habitats, suggesting that these shrubs may also act as seed traps. The community-level effects of creosotebushes increased with landscape age and creosotebush cover, indicating that magnitude of these effects depends on the disturbance history of each site. These results highlight the relevance of performing large-scale assessments for identifying the consequences of facilitation on vegetation recovery across space and time. We then propose that this kind of large-scale approach should be taken into account in the development of conservation programs aimed at the recovery and preservation of plant biodiversity in harsh environments.     

Pollen limitation and fruit abortion in a declining rare tree,the Eurasian yew (Taxus baccata L.): A reproductive cost of ecological marginality

Populations of rare tree species such as the dioecious and anemophilous yew (Taxus baccata) are especially prone to extinction if they occupy marginal habitats. This is the case of yew populations growing in Mediterranean mountains under dry climate and a severe anthropogenic disturbance regime, which show insufficient regeneration. We examined two of the likely mechanisms driving this population decline. The study was conducted in a central Spanish yew population in 2005 and 2006. On one hand, we tested for the effect of the amount of pollen received by female flowers by means of a pollen addition experiment. On the other hand, we tested for the effect of initial fruit set on abortion and mature fruit production. Finally, we evaluated the effect of the spatial arrangement of male and female yew trees on realized fecundity. The success of fertilization and fruiting in the experimental population was pollen-limited. Female trees aborted ca. 70% of the fruit set in both years and treatments. Fruit set was significantly influenced by the females' neighbourhood, with fecundity decreasing exponentially with distance to the nearest male in both years. Overall, our results indicate that factors associated with ecological marginality have a strong influence on yew performance.     

Fragment shape and tree species composition in tropical forests: a landscape level investigation

Fragmentation of tropical forest alters community composition as a result of changes in forest shape. This paper uses 22 hypotheses to test the effect of fragment shape on tree species composition in Ghana, West Africa, within biological categories of regeneration guild, rarity, phenology and dispersal. For both regenerating and mature trees, relationships between species composition and the shape of forest fragments were complex; almost half were significant but many failed to support the established hypotheses. Irregular shaped fragments had high proportions of regenerating, light‐demanding pioneers and mature, animal‐dispersed species. Species common to Ghana formed the foundation of communities in fragments of all shapes. Investigation at the landscape level indicated broad patterns of species change. Rigorous hypothesis testing is needed, following extensive demographic work on the ground, before population dynamics within tropical forest fragments can be comprehended fully and applied to conservation management.     

Parsimony in landscape metrics: Strength,universality, and consistency

Ecologists can be overwhelmed by the number of metrics available to quantify landscape structure. Clarification of interrelationships and redundancy is needed to guide metric selection and interpretation for the purpose of landscape monitoring. In this study we identified independent components of class- and landscape-level structure in multiple landscapes in each of three large and geographically disjunct study areas. We used FRAGSTATS and principal components analysis (PCA) to identify independent components of landscape structure, and cluster analysis to group the components. We then calculated the universality, strength, and consistency of the identified landscape structure components. At the class-level we identified 24 independent configuration components. Seven of these components were nearly universal and consistent in interpreted meaning. At the landscape-level there were 17 independent structure components. Eight of these components were universal and consistent. These results indicate that there are consistent combinations of metrics that universally describe the major attributes of landscape structure at the class- and landscape-levels.     

Post‐dispersal seed depletion by rodents in marginal populations of yew (Taxus baccata): consequences at geographical and local scales

Post‐dispersal seed predation is a crucial phenomenon for plant recruitment, and its incidence can be hypothesized to increase in ecologically and geographically marginal populations of threatened species, such as yew (Taxus baccata). Here we examine the among‐ and within‐population patterns of seed consumption by rodents and evaluate to what extent they are linked to marginality in Mediterranean low‐density yew stands. Among populations we tested: (i) whether the rates of seed predation found in our marginal sites were consistently higher than in populations from core regions; (ii) within populations we evaluated whether rodents preferred microhabitats with greater seed availability (beneath female yew trees) or with lower predation risk (shrubs) in two seeding seasons (fall–winter 2005 and 2006). Predation rates were extremely high (92.5%) and they were well above values reported for core populations (65.4%), to the extent that rodents almost completely depleted the experimental seeds in all populations and years. Our expectation of lower predation rates with decreasing vegetation cover was also confirmed for all years and populations, suggesting that rodent foraging was risk‐sensitive. This microhabitat effect outweighed the effect of seed availability under female yew trees, implying also that rodents selectively consumed the most valuable seeds in terms of their recruitment prospects. Overall, our results suggest that the mechanisms underlying seed depletion and its demographic consequences are linked to the effects of reduced yew performance in ecologically marginal habitats.     

Highlighting the effects of land-use change on a threatened amphibian in a human-dominated landscape

In Western Europe, habitat loss and landscape fragmentation has led to significant population decline in various animal groups, including amphibians. The extinction of the last natural populations of the yellow-bellied toad in Belgium, Luxembourg and several regions of southern and western France suggests a widespread decline. By using site-occupancy models and adding covariates corresponding to the human-influenced features of the landscape, we tried to identify the relative effects of different land-use types on the species’ distribution pattern in a man-made environment (the Alsatian Rhine floodplain in France). We recorded presence–absence data in 150 forest sample plots (300 × 300 m) and then modeled species distribution while taking into account detection errors in the field. Land-use was recorded on two spatial scales: within the forest sample plots and in a 1500 m radius buffer area around the forest plots. In the forest plots, toad occurrence was negatively correlated with loss of forest cover to agricultural land. In contrast, occurrence is positively correlated with the density of human-made rutted dirt paths and tracks, which provide semi-natural breeding sites. In the 1500 m radius buffer zones around forest plots, toad occurrence was negatively correlated with the density of urbanization and road networks. These results can be used to plan conservation strategies for amphibians in human-dominated landscapes.     

Improved effects of polyethylene glycol on the growth,antioxidative enzymes activity and taxanes production in a Taxus baccata L. callus culture

Plant Cell, Tissue and Organ Culture (PCTOC) - Application of abiotic stress-inducing elicitors is one of the effective strategies in order to increase the production of secondary metabolites in...     

Taxol production in bioreactors: Kinetics of biomass accumulation, nutrient uptake, and taxol production by cell suspensions of Taxus baccata

The kinetics of biomass accumulation, nutrient uptake and taxol production of Taxus baccata cell suspensions were examined in three bioreactor configurations, viz. 250-mL Erienmeyerflasks, 1-L working volume pneumatically mixed (PMB), and stirred tank (STB) bioreactors. Qualitatively similar kinetics were observed in all three bioreactor types. Biomass accumulation and specific nutrient uptake rates exhibited biphasic characteristics. Carbohydrate uptake and biomass accumulation substantially ceased when phosphate was depleted from the medium. Phosphate was identified as a possible growth-limiting nutrient. Taxol accumulated exclusively in the second phase of growth. A maximum taxol concentration of 1.5 mg/L was obtained in the PMB which was fivefold greater than that obtained in the Erienmeyer flasks and the STB, but the relative kinetics of taxol production was the same in all three reactor types. Biomass yields were calculated from the kinetic data and a stoichiometry for biomass formation was evaluated. The similarity of kinetics in the three bioreactor configurations suggests that taxol production by T. baccata cell suspensions is amenable to scateup. (c) 1995 John Wiley & Sons, Inc.     

Genetic variation and differentiation in populations of a threatened tree, Magnolia stellata: factors influencing the level of within-population genetic variation

Genetic variation and differentiation in Magnolia stellata were studied in 20 populations distributed across most of the species' range using 10 microsatellite markers, and the factors influencing their levels of within-population genetic variation were examined. Generally, populations distributed intermittently from southern Gifu to central Aichi Prefectures showed substantially higher levels of genetic variation (exceptions included populations located at unusually high altitude sites or western and southern edges of the range) than more isolated populations on the Atsumi Peninsula of southern Aichi Prefecture and in northern Mie Prefecture. Significant isolation-by-distance patterns were detected in genetic differentiation among the studied populations, and a neighbor-joining tree based on D(A) distances among the populations reflected well the geographical positions of the populations. The level of within-population genetic variation was significantly influenced not only by the size of the populations (represented by the number of reproductive individuals) but also by their degree of isolation (represented by the number of populations within a radius of 0.5 km around them). Therefore, areas within radii of 0.5 km may encompass M. stellata metapopulations, in which gene flow may usually occur. We suggest that this area may be a suitable standard for constructing conservation units for the species.     

Water distribution at local and landscape scales affects tree utilization by elephants in Chobe National Park,Botswana

African elephant distribution and impacts are influenced by water availability. This study investigates the formation of piospheres – gradients of vegetation degradation with increasing proximity to water – at local and landscape scales in Chobe National Park, Botswana. Thirty‐four plots record elephant impact on trees in a transect extending over 60 km from the Chobe River, differentiating between debarking and browsing on branches. Elephant utilization exhibits local patterns nested within a landscape‐level context. At a local scale, branch herbivory decreases with distance from water, while debarking first decreases and then increases again. At a landscape scale, regression and canonical correlation analyses show decreasing debarking with distance from the river. Surprisingly, branch herbivory increases with distance from river, except within the first 10 km where previous studies have focused. Elephant impact on vegetation is both more complex and extensive than previously assumed. Piosphere predictions are upheld at the local scale, with utilization decreasing with distance from water. This does not hold at the landscape scale, however, likely due to seasonal shifts in elephant distribution, diet and the presence of water in ephemeral pans. These findings have important implications for elephant management and emphasize the importance of looking across scales when assessing elephant impact.     

Floral resources,pollinators and fruiting in a threatened tropical deciduous tree

Aims Nothapodytes nimmoniana (Family Icacinaceae) is a deciduous tree species distributed in Asia facing severe population decline. Wood chips from the tree are a source of camptothecin, a globally sought-after alkaloid with cancer-treating properties, and are harvested unsustainably in natural forests. We studied the pollination ecology of the species and asked if there are constraints in pollination and fruiting success in its natural populations. We also discuss the potential effects of wood extraction on pollinators and reproductive success in the population.Methods The study was carried out during the flowering season in two populations with varying exploitation levels, both located in the Protected Area Network in the Western Ghats of Karnataka State. We assessed floral resource availability and measured pollinator diversity and activity in the canopy from the perspective of the biology of the species. We quantified pollinator abundance and percent fruit set as a function of population density.Important findings Flowers belong to the fly pollination syndrome and are open to visits by generalists such as Apis dorsata and Trigona iridipennis. Fruiting success did not vary between exploited and unexploited sites, but there was a significant difference in pollinator assemblage. In a lean male flowering year, fruit set was low, suggesting pollen limitation in the population. No fruiting was recorded in the second year at the site where trees were felled soon after the flowering period. We argue that when male floral resources are altered in exploited populations, pollinators of generalist nature may show a shift in foraging pattern. Also, generalist plants may be as susceptible to pollination loss as are specialist plants. The need for outcrossing in the species would probably exacerbate this vulnerability.     

Physiological,biochemical, and metabolic responses of a Taxus baccata L. callus culture under drought stress

In Vitro Cellular & Developmental Biology - Plant - The metabolic stimulation induced by abiotic stress is an efficient strategy for the production of secondary metabolites in sterile and...     

Facilitation by nurse shrubs of resprouting behavior in a post-fire shrubland in northern Patagonia,Argentina

Abstract. The nurse-plant syndrome is a widely recognized example of positive (facilitative) influences of plant species on the establishment and growth of other species. Most studies of the nurse-plant syndrome have been on species that reproduce mainly from seed rather than vegetatively. In this study, we experimentally compared the influences of two species of nurse shrubs, Schinus patagonicus and Berberis buxifolia, on the survival and growth of vegetatively reproducing herbaceous and woody plants in a post-fire shrubland in northern Patagonia, Argentina. The vegetation beneath shrubs was removed by clipping and, in a paired-sample design, one half of the canopy of each shrub was removed. We determined species richness, counted number of resprouts, and measured photon flux density and soil moisture beneath cut and uncut halves of each shrubs. Abundances of resprouts were several times greater beneath the uncut vs. the cut shrubs, as was the mean number of species. Thus, shrubs have a strong facilitating influence as measured by resprout densities and the number of species. Numbers of resprouts and of species were twice as high beneath Schinus as beneath Berberis, implying important differences in the facilitative effects of the two shrubs species. Microsites beneath Schinus were characterized by lower and more heterogeneous light levels but by greater soil moisture. Even though the reproductive mode in this post-fire shrubland is overwhelmingly vegetative, facilitation by nurse shrubs is important and differentially effective for different species of nurse shrubs.     

Biased parasitoid sex ratios: Wolbachia,functional traits,local and landscape effects

Adult sex ratio (ASR) is a key demographic parameter, being essential for the survival and dynamics of populations. Biased ASRs are adaptations to the environment on different scales, resulting from different mechanisms such as inbreeding, mating behaviour, resource limitations, endosymbionts such as Wolbachia, and changes in density or spatial distribution. Parasitoid ASRs are known to be strongly biased, but little information is available on how they are affected by large-scale variables such as landscape composition or fragmentation. We examined whether landscape scale variables affect the ASR of several parasitoid species belonging to the same tritrophic gall inducer community. We examined the effects of various explanatory variables on parasitoid ASR: the ovipositor length (a species level functional trait), resource amount (gall size) and density (local scale) as well as habitat amount, land use and landscape history (landscape scale). We controlled for the incidence and prevalence of Wolbachia infections. We found that parasitoid ASR is best explained by and positively correlated with ovipositor length and gall diameter. The interaction of functional traits with habitat availability also significantly explained parasitoid ASRs. Our results support the hypothesis that large-scale environmental characteristics affect parasitoid ASRs in addition to intrinsic and local characteristics.     

Manipulation by culture mixing and elicitation of paclitaxel and baccatin III production in Taxus baccata suspension cultures

Summary Experiments were carried out with Taxus baccata cell lines showing different paclitaxel-producing capacities (between 1.74 and 19.91 mgl^−1) when growing in a selected product-formation medium that specifically stimulated the production of taxane to the detriment of cell growth. Through mixing low-, medial- and high-producing lines, it could be observed that paclitaxel productivity in the resulting mixed lines was clearly higher than the mean productivity of the individual lines before mixing. This suggests that culture components generated by high-producing individual lines within the population might induce paclitaxel production. Although the accumulation of paclitaxel and baccatin III was higher when 100 μM methyl jasmonate was added to the subcultures of the mixed lines, the results indicate that exogenously applied methyl jasmonate was not the first factor to stimulate taxane production. The possible effects of methyl jasmonate elicitation and paclitaxel accumulation on cell viability are also considered.     

Paclitaxel and baccatin III production induced by methyl jasmonate in free and immobilized cells of Taxus baccata

The effects of 100 and 200 μM methyl jasmonate (MJA) on cell proliferation and paclitaxel and baccatin III production were investigated in free and alginate immobilized cells of Taxus baccata growing in a selected product formation culture medium. The greatest accumulation of paclitaxel (13.20 mg dm⁻³) and baccatin III (4.62 mg dm⁻³) occurred when 100 μM MJA was added to the culture medium of cells entrapped using a 1.5 and 2.5 % alginate solution. The effects of different treatments on the viability of cultured cells and their capacity to excrete both taxanes into the surrounding medium were considered.     

Inhibition of paclitaxel and baccatin III accumulation by mevinolin and fosmidomycin in suspension cultures of Taxus baccata

To achieve a better understanding of the metabolism and accumulation of paclitaxel and baccatin III in cell cultures of Taxus, inhibitors of the early steps in the terpenoid pathway were applied to a cell suspension culture of Taxus baccata: fosmidomycin as an inhibitor of the non-mevalonate branch of the pathway, and mevinolin as an inhibitor of the mevalonate branch. Synthesis of both taxanes in the cell suspension was first increased when cultured in the product formation medium supplemented with methyljasmonate (100 microM). The product formation medium was selected after assaying 24 different culture media. When fosmidomycin (200 microM) was added to the product formation medium together with the elicitor, the accumulation of paclitaxel and baccatin III was reduced by up to 3.0 and 1.5 times, respectively, whereas the inhibitory effect of mevinolin (1 microM) was only clearly exerted in the case of paclitaxel. Under the conditions of our experiment, we conclude that in the synthesis of both taxanes, the non-mevalonate pathway is the main source of the universal terpenoid precursor isopentenyl diphosphate (IPP).