Characterization of microsatellite loci in the creek chub (Semotilus atromaculatus)

Thirty‐two polymorphic microsatellite loci (29 novel, 3 cross‐species) are characterized in the creek chub, Semotilus atromaculatus, a widespread and abundant North American minnow. Novel repeat‐containing sequences were isolated using a standard microsatellite enrichment procedure. A set of di‐, tri‐, and tetranucleotide markers with allele numbers ranging from two 16 are now available for estimating relatedness within and among populations in this ecologically important species.     

Age structure and multi-model growth estimation of longnose stingray Hypanus guttatus (Dasyatidae: Myliobatoidei) from north-east Brazil

We collected 729 Hypanus guttatus from the northern coast of the state of Rio Grande do Norte (RN), of which 196 were used to estimate age and growth. Ninety-five were male (12.7 to 57.0 cm disc width; W_D) and 101 were female (13.0 to 88.5 cm W_D); females were significantly larger than males. Cross sections of vertebrae showed band-pairs ranging from 0 to > 14 in females and from 0 to 9 in males. New-borns presented an opaque edge at birth in vertebrae without a birthmark. The average percentage of error (APE; %E) for the entire sample provided evidence that ages were repeatable. The mean monthly marginal increment (I_M) indicates annual band-pair formation from August to November. The annual cycle model for one band-pair deposition provided the best fit to data based on the AIC, with peaks between August and October, similar to that found in the I_M analysis, suggesting an annual formation pattern. A multi-model approach that included four models based on the observed mean W_D at age indicated a modified von Bertalanffy growth model as the best for describing the species growth: W₀ (W_D at birth) = 14.6 cm for both sexes; females W_∞ = 98.61 cm (95% CI = 87.34–114.61 cm); k = 0.112 year⁻¹ (CI = 0.086–0.148 year⁻¹); males W_∞ = 60.22 cm (CI = 55.66–65.35 cm); k = 0.219 year⁻¹ (CI = 0.185–0.276 year⁻¹). The age-at-maturity in males and females is 5 years and 7 years, respectively. The age composition shows that most (84%) specimens were aged 0 to 2 years. The information provided here is essential for analytical assessments of H. guttatus, which is subject to significant fishing pressure mainly on new-borns and juveniles.     

栲树种群的年龄结构及其生长特征

为了了解栲树的更新方式和更新动态,研究了栲树的生长特征和种群年龄结构.结果表明：栲树种群的年龄结构呈“间歇型”,经历了两个死亡高峰,并存在一个长达30年的断层;栲树的生长受光照的影响,具有很强的可塑性;由于林下光照弱且在垂直空间上不存在差异,栲树生长5～8年后进入生长的第1个抑制期,其年高生长速度可小于0.1 m,并可维持10年;栲树生长的第1个抑制期的起始时间对应着种群第1个死亡高峰期的结束时间,而其结束时间对应着种群第2个死亡高峰期的起始时间,表明栲树生长特征是影响其种群年龄结构的关键因素.     

Multi‐scale effects of impoundments on genetic structure of creek chub (Semotilus atromaculatus) in the Kansas River basin

1. Habitat fragmentation has been implicated as a primary cause for the ongoing erosion of global biodiversity, yet our understanding of the consequences in lotic systems is limited for many species and regions. Because of harsh environmental conditions that select for high colonisation rates, prairie stream fishes may be particularly vulnerable to the effects of fragmentation. Hence, there is urgent need for broader understanding of fragmentation in prairie streams such that meaningful conservation strategies can be developed. Further, examination at large spatial scales, including multiple impoundments and un‐impounded catchments, will help identify the spatial extent of species movement through the landscape. 2. Our study used data from 10 microsatellite loci to describe the genetic structure of creek chub (Semotilus atromaculatus) populations across four catchments (three impounded and one un‐impounded) in the Kansas River basin. We investigated whether genetic diversity was eroded in response to habitat fragmentation imposed by reservoirs and whether intervening lentic habitat increased resistance to dispersal among sites within a catchment. 3. Our analyses revealed that genetic diversity estimates were consistent with large populations regardless of the location of the sampled tributaries, and there was little evidence of recent population reductions. Nevertheless, we found a high degree of spatial genetic structure, suggesting that catchments comprise a set of isolated genetic units and that sample sites within catchments are subdivided into groups largely defined by intervening habitat type. Our data therefore suggest that lentic habitat is a barrier to dispersal among tributaries, thus reducing the opportunity for genetic rescue of populations in tributaries draining into reservoirs. Isolation by a reservoir, however, may not be immediately deleterious if the isolated tributary basin supports a large population.     

Otolith description and age‐and‐growth of Kurtus gulliveri from northern Australia

The sagitta of Kurtus gulliveri was ovate, moderately thick with the following attributes: lateral surface convex, mesial surface flat; dorsal margin sinuate, posterior margin rounded ventrally, ventral margin rounded and irregular; sulcus divided into ostium and cauda by constriction of dorsal and ventral margins, heterosulcoid, colliculum heteromorph; dorsal depression large and distinct, ventral groove close to margin in larger otoliths; rostrum broad and antirostrum small, separated by wide, shallow excisural notch. Otolith size was moderate, average 4·6% standard length ( L _S), typical for a perciform. Annuli on 78 whole sagittae were read, and 15% of these were transversely sectioned for verification of the annuli. Males ranged from 94 to 235 mm L _S and females from 95 to 284 mm L _S. There was little difference in size distribution of the sample between the sexes, perhaps due to a 6 month spawning season over which young were continually added to the population. Some sexual dimorphism was noted, however, as age 2 year females were significantly larger than males of the same age. The largest fish aged was a 284 mm L _S, 3 year‐old female, and the oldest age reached was 4 years by two males. It appears likely that most spawning females are ≥2 years old, but some larger 1 year old fish may attain sexual maturity.     

Age, growth, and sexual maturity of the yellownose skate Dipturus chilensis in the south‐eastern Pacific

The age and growth parameters of Dipturus chilensis were estimated by counting growth rings from thin sections of vertebral centra from 400 fish (246 females and 154 males), ranging from 23 to 124 cm total length (L_T), and backcalculating fish lengths at previous ages. Marginal increment analysis lent support to the hypothesis of annual deposition of band‐pairs, which formed during the winter months. The oldest female D. chilensis aged in this study was 21 years and 117 cm L_T, whereas the oldest male was 18 years and 93 cm L_T. A 4·7% index of average per cent error (I_APE) suggested that this is a precise method for calculating the age of D. chilensis. Observed L_T were lower than backcalculated L_T, which implies the influence of Lee's phenomenon. The von Bertalanffy growth equations, based on mean length‐at‐age data, were estimated as L_t = 128·3 (1 ? e^{?0·112 (t + 0·514)}) for females and L_t = 107·8 (1 ? e^{?0·134 (t + 0·862)}) for males where t is age (years). Growth was significantly different between sexes: females reached a larger adult size. Ages and lengths at 50% maturity were estimated at 14 years of age and 106 cm L_T for females and 11 years of age and 86 cm L_T for males. At c. 14 years, there was a decline in growth rates in females. The factor most likely responsible for this was sexual maturity, which caused a discontinuity in growth of female fish. These results show that this species is slow‐growing, long‐lived, relatively large and of delayed maturity, characteristics that make it vulnerable to exploitation.     

Effects of dynamic landscape elements on fish dispersal: the example of creek chub (Semotilus atromaculatus)

Barriers along a watercourse and interconnections between drainage systems are dynamic landscape elements that are expected to play major roles in the dispersal and genetic structure of fish species. The objective of this study was to assess the role of these elements using creek chub ( Semotilus atromaculatus ) in the Mastigouche Wildlife Reserve (Québec, Canada) as model. Numerous impassable waterfalls and interconnections among drainage systems were inferred with geographic information systems and confirmed de visu . The analysis of 32 populations using seven nuclear microsatellites revealed the presence of three genetically distinct groups. Some groups were found upstream of impassable barriers and in adjacent portions of distinct drainage systems. Admixture among groups was also detected in some populations. Constraining phylogenetic procedures as well as Mantel correlation tests confirmed that the genetic structure is more likely to result from interconnections between the drainage systems than from the permanent network. This study indicates that landscape elements such as interconnections are of major importance for circumventing impassable barriers and colonizing lakes that are otherwise inaccessible. Such an approach could be relevant for determining the origins of fish species (i.e. native vs. introduced) in the context of conservation.     

Influence of visual and olfactory cues on field trapping of the pollen beetle, Astylus atromaculatus (Col.: Melyridae)

Field trapping experiments investigated the response of the pollen beetle Astylus atromaculatus to visual and olfactory cues during a 3-year period, 1999–2001. The visual preference of the pollen beetle was determined using yellow, white, blue, green and red water traps. The yellow trap was most attractive, capturing 56% of the total beetles trapped, with 30% caught by the blue and white traps, while 14% was caught by the red and green traps. The response of the beetle to olfactory cues was then evaluated by using the yellow water trap with three antennally active components identified in the volatiles of sorghum panicles by coupled gas chromatography (GC)–electroantennographic detection and GC–mass spectrometry. These components were 2-phenylethanol, benzyl alcohol and linalool. There were no significant colour × chemical compound interactions and traps baited with 2-phenylethanol captured significantly more beetles than unbaited traps, irrespective of trap colour, demonstrating the effectiveness of olfactory cues in trapping the pollen beetle. Traps baited with 2-phenylethanol were more attractive than and caught more beetles than traps baited with linalool. 2-Phenylethanol had the greatest effect on the relatively unattractive blue trap, confirming the importance of olfactory cues mediating A. atromaculatus attraction .     

A sex cord‐like structure and some remarkable features in early gonadal sex differentiation in the marine teleost Siganus guttatus(Bloch)

Several notable features of early gonadal sex differentiation in the golden rabbitfish Siganus guttatus are described including the first report among teleosts of a distinctive dual structure, consisting of somatic cells directly enclosing germ cells (sex cord‐like structure, SCS) and outer somatic tissue surrounding the SCS, in both undifferentiated and early differentiated gonads. Germ cells occurred and proliferated exclusively in the SCS during the process of ovarian and testicular differentiation. A second remarkable characteristic was the delayed germinal cell proliferation for oogenesis in the ovary, that commenced simultaneously with that in the testis, a relatively long time after the onset of somatic development. These observations suggest the possibility that sex differentiation of germ cells is preceded by some sex specific changes in somatic components of the SCS that are light‐microscopically indistinguishable between the sexes. The third unique feature was the detachment of gonadal tissue, including both somatic and germ cells, into the ovarian cavity in the ovary and into the seminiferous lobules and main seminal duct in the testis. This phenomenon occurred in the testis, forming the efferent duct network after 73 days post‐hatch (DPH), and in the ovaries, forming the ovigerous lamellae and regulating the number of oocytes attaining full maturation at c . 129 DPH.     

Age and growth of Saurenchelys (Nettastomatidae) and Dysomma (Synaphobranchidae) leptocephali in the East China Sea

The otolith microstructures of the leptocephali of Saurenchelys stylura and Dysomma sp., collected in November and December 2000 in the East China Sea, were examined to determine their larval ages and growth rates, and the spawning times of these two species of outer shelf and slope marine eels. Leptocephali ranging in size from 8 to 48 mm total length were examined, and the nettastomatid, S. stylura , and the synaphobranchid, Dysomma sp., had estimated ages that ranged from 16 to 75 days and 17 to 66 days, respectively. The overall growth rate of S. stylura was 0·68 mm day⁻¹( n  = 21), and of Dysomma sp. was 0·44 mm day⁻¹( n  = 22). These growth rates were similar or slightly faster than those observed for anguillid leptocephali in offshore areas of the western Pacific. The backcalculated hatching dates for these two species were from September to November. The otolith increment widths of S. stylura showed an increase before 20 to 30 days that were similar to those in anguillid species, but in Dysomma sp. there were no remarkable increases.     

Factors affecting aggression in a captive flock of Chilean flamingos (Phoenicopterus chilensis)

The influence of pair bond status, age and sex on aggression rates in a flock of 84 captive Chilean flamingos at Zoo Atlanta was examined. Analysis showed no difference between aggression rates of male and female flamingos, but adult flamingos had higher rates of aggression than juveniles. There were also significant differences in aggression depending on pair bond status (single, same‐sex pair, male–female pair or group). Bonded birds were significantly more aggressive than single birds, which is consistent with the concept that unpaired birds are not breeding and do not need to protect pair bonds or eggs. Birds in typical pair bonds (male–female) and atypical pair bonds (same‐sex pairs or groups) exhibited similar rates of aggression. These results contribute to the existing body of research on aggression in captive flamingos. Zoo Biol 30:59–64, 2011. © 2010 Wiley‐Liss, Inc.     

Individual‐level analysis of pre‐ and post first‐feed growth and development in Atlantic salmon

Atlantic salmon Salmo salar were followed from egg to smoltification using genetic analysis to identify individuals and to link observations from pre‐ and post first feeding. Egg size and hatch timing significantly influenced alevin size at first feed but neither egg size, hatch timing or alevin sizes were correlated to size, condition factor or smolt status post first feed. In a hatchery environment the potential advantage gained by early hatching, larger alevin does not persist after first feeding. Different physiological and genetic complexes appear to influence growth in these two distinct phases of the Atlantic salmon's life‐cycle.     

Population dynamics of Walia ibex (Capra walie) at Simien Mountains National Park,Ethiopia

Intensive total direct counts of Walia ibex (Capra walie) population were performed at Simien Mountains National Park (SMNP) in 2009. Historical data were collected from SMNP and literature reviews. Different models were suited to determine population growth rates and intrinsic rate of increase. The population size estimated was 745 animals. The correlation between the two repeated counts was significant (r = 0.99 and P < 0.01). Mean instantaneous growth rate (r), growth rate per capita (λ) and population annual growth rate (Λ) were 2.6 ± 2.6, 0.03 ± 0.18 and 19.5 ± 50.4, respectively. Instantaneous growth rate and growth rate per capita were positively correlated (r = 0.958, P < 0.01). Average growth rate (rΛ) and intrinsic rate of increase (rr) under ideal (r = 0.950, P < 0.01) and random environments (r = 0.810, P < 0.01) were positively correlated. The population grows by 2.5% under ideal environments with an intrinsic increase of 0.04 (0.006%) and by 0.13% under random environments with intrinsic rate of decrease of ?0.184 or ?0.025% per year, respectively. The mean rank of the flock structure of whole population was 3.13, 3.88, 2.00 and 1.00 for males, females, juveniles and unidentified, respectively.     

Temporal and spatial variation in potential and realized growth rates of age‐0 year northern rock sole

The possibility of prey limitations on the growth performance of age‐0 year northern rock sole Lepidopsetta polyxystra was evaluated at three sites along the north‐east coast of Kodiak Island, Alaska, U.S.A., by comparison of observed to potential growth rates. Growth potential was measured in the laboratory across the range of temperatures encountered by this species during the first summer of life. Growth potential ( g _L, mm day⁻¹) increased with water temperature (T) between 2 and 13° C, according to: g _L = 0·0151 + 0·3673·log₁₀(T). There were significant differences in growth rate between the three field sites such that Holiday Beach fish were 7·1 mm longer than Shakmanof Beach fish by mid‐September, with Pillar Creek Cove fish of intermediate size. Temperature differences between sites accounted for less than half of this variation. The remainder may have been related to differences in prey availability among the sites in association with observed differences in sediment characteristics. In addition to the spatial variability, there was significant monthly variation in growth performance. Realized growth rates between July and August were in excess of 85% of potential. Between August and September, however, realized growth fell to 43–71% of potential indicating a decline in conditions for growth. The spatial variation in growth rates was not density‐dependent as the site with the highest fish densities (Holiday Beach) also supported the highest growth rates. The available data indicates that for this subtidal species, interannual variation in growth may be more important than site variation.     

北盘江光唇裂腹鱼年龄结构、生长特征和生活史类型

光唇裂腹鱼(Schizothorax lissolabiatus)主要分布于珠江水系南北盘江、元江、澜沧江和怒江等。以2008-2009年在北盘江采集的261尾光唇裂腹鱼为材料,研究了光唇裂腹鱼的年龄和生长特征。选用鳞片作为年龄鉴定的主要材料,并结合主鳃盖骨、匙骨、背鳍条等材料,对光唇裂腹鱼个体进行了年龄鉴定。结果表明:这4种材料年龄鉴定结果趋于一致,吻合性高。光唇裂腹鱼体长与鳞径的最佳函数关系为线性函数L=20.202R+65.726,体长与体重的最佳拟合方程呈幂函数关系W=4×10-5L2.8208。Von Bertalanffy方程、Logistic方程、Gompertz方程均为光唇裂腹鱼拟合性较好的生长方程,并以Von Bertalan-ffy方程的拟合度最高;光唇裂腹鱼Von Bertalanffy生长方程为:Lt=475.51[1-e-0.138(t+1.1397)],Wt=1424.93[1-e-0.138(t+1.1397)]2.8208;体重生长拐点为6.37龄。1~4龄为光唇裂腹鱼生长的快速阶段,而5龄以上个体的生长速度明显降低。根据r-选择和k-选择的典型特征以及渐近体长(L∞)、渐近体...     

Marbled lungfish growth rates in Lake Baringo, Kenya, estimated by mark‐recapture

Mark‐recapture was used to quantify the relationship between body mass ( M _T) and individual growth rates of sub‐adult marbled lungfish Protopterus aethiopicus in Lake Baringo, Kenya. Specific growth rate (in mass) was found to be a well defined and decreasing function of M _T over the size range of recaptured fish. Growth trajectories based on this function indicated that Lake Baringo African lungfish reached maturity at an age of c . 3 years and had a low reproductive effort.     

Inter‐individual differences in rates of routine energy loss and growth in young‐of‐the‐year juvenile Atlantic cod

Inter‐individual differences in rates of routine (non‐feeding) metabolism and growth were evaluated in young‐of‐the‐year (YOY) juvenile Atlantic cod Gadus morhua . Rates of O₂ consumption, CO₂ production and ammonia (TAN) excretion were measured in 64, 25–43 mm standard length ( L _S) YOY growing at different rates (0·27–0·47 mm day⁻¹) in a common rearing tank. Parameter rates ( y ) increased allometrically ( y = a·M^b ) with increasing body mass ( M ) with b ‐values for O₂ production, CO₂ consumption and TAN excretion equal to 0·81, 0·89 and 0·56, respectively. In some cases, residuals from these regressions were significantly negatively correlated to fish growth rate. In no cases did residuals of parameter rates increase with increasing growth rate. These data suggest that, during unfed periods, relatively fast‐growing fish were more metabolically efficient than slower‐growing fish from the same cohort. The fish condition factor, derived from     , also significantly decreased with increasing growth rate. Results indicated differences in both the rates of routine energy loss and the patterns of growth allocation among YOY Atlantic cod. Since these physiological attributes were positively correlated with growth rate, they may be indicative of 'survivors' in field populations.     

Exposure to a common urban pollutant affects the survival and swimming behaviour of creek chub (Semotilus atromaculatus)

Anthropogenic effects on the aquatic environment are ever present and ever increasing and while a plethora of aquatic contaminants are known to affect fishes, one ubiquitous and increasingly prevalent world-wide urban runoff pollutant is frequently disregarded, and that is pet waste. While dog waste has been identified as a significant factor contributing to bacteria and nutrient loading within receiving waters and the associated water quality changes are known to affect fishes, the impact of uncollected dog faeces on urban fish populations has never been directly investigated. In this study we exposed creek chub (Semotilus atromaculatus), a widespread tolerant stream minnow, to various realistic concentrations of dog waste as simulated urban park runoff testing both fresh and dried dog faeces in both stagnant and aerated water for 96 h to investigate the impact on fish survival and behaviour. Creek chub percentage mortality increased significantly relative to controls and across an exposure gradient and was likely caused by anoxic conditions. Survivors were initially smaller while those that died were initially larger and presented with abnormal abdominal subdermal lesions post-exposure. Additional indicators of physiological stress included significantly increased rates of aquatic surface respiration and changes in flume test derived swimming motivation metrics with increased exposure concentrations. Both mortality and behavioural responses were alleviated by aeration. Furthermore, trials with fresh and dried faeces differed only in time-to-death and swimming metrics where results from dried trials were similar to those from aerated experiments. Results demonstrated the impact that the global dog waste management problem can have on aquatic communities with effects on creek chub likely to be more severe for less pollution-tolerant species and also likely to be exacerbated under future scenarios that consider climate change and increased urbanization.     

Fish species associations in riffle habitat of streams of varying size and acidity in New Brunswick and Nova Scotia

Factors related to stream size and alkalinity were most influential in determining fish species associations in three catchments of New Brunswick (NB) and Nova Scotia (NS) Canada, as determined by discriminant function analysis of TWINSPAN stream site classification.
In the circumneutral Saint Croix (NB) catchment, the creek chub, Semotilus atromaculatus (Mitchill), brook trout, Salvelinus fontinalis (Mitchill), blacknose dace, Rhinichthys atratulus (Hermann), Atlantic salmon, Salmo salar Linnaeus, eel, Anguilla rostrata (Lesueur) and fallfish. Semotilus corporalis (Mitchill) dominated stream sites of progressively greater discharge and higher median mid-summer temperature. In the acidic Gold (NS) system, the brook trout, Atlantic salmon, and eel exhibited a distribution pattern in relation to stream size and temperature similar to that for the Saint Croix, with the eel relatively more abundant in the Gold at large stream sites. The creek chub was excluded from the smallest tributaries by low pH. The ranges of blacknose dace and fallfish do not extend to southwestern Nova Scotia. In the Medway (NS) system (slightly more acidic than the Gold), the relative abundance of Atlantic salmon is reduced, and that of eel increased as compared with the Gold and Saint Croix systems. The lower limiting mid-summer pH levels for creek chub, salmon, brook trout, and eel are 5.2, 5.0, 4.7 and <4.5 respectively.