共查询到20条相似文献,搜索用时 15 毫秒
1.
The 6-deoxyerythronolide B synthase (DEBS) is a prototypical assembly line polyketide synthase produced by the actinomycete Saccharopolyspora erythraea that synthesizes the macrocyclic core of the antibiotic erythromycin 6-deoxyerythronolide B. The megasynthase is a 2-MDa trimeric complex composed of three unique homodimers assembled from the gene products DEBS1, DEBS2, and DEBS3, which are housed within the erythromycin biosynthetic gene cluster. Each homodimer contains two clusters of catalytically independent enzymatic domains, each referred to as a module, which catalyzes one round of polyketide chain extension and modification. Modules are named sequentially to indicate the order in which they are utilized during synthesis of 6-deoxyerythronolide B. We report small-angle X-ray scattering (SAXS) analyses of a whole module and a bimodule from DEBS, as well as a set of domains for which high-resolution structures are available. In all cases, the solution state was probed under previously established conditions ensuring that each protein is catalytically active. SAXS data are consistent with atomic-resolution structures of DEBS fragments. Therefore, we used the available high-resolution structures of DEBS domains to model the architectures of the larger protein assemblies using rigid-body refinement. Our data support a model in which the third module of DEBS forms a disc-shaped structure capable of caging the acyl carrier protein domain proximal to each active site. The molecular envelope of DEBS3 is a thin elongated ellipsoid, and the results of rigid-body modeling suggest that modules 5 and 6 stack collinearly along the 2-fold axis of symmetry. 相似文献
2.
《Journal of enzyme inhibition and medicinal chemistry》2013,28(2):149-156
AbstractThree vitamin B6 analogues have been synthesized and tested as inhibitors of thymidylate synthase. The compounds are: 4′,5′-dichloro-, 4,5′-dibromo- and 4′, 5′-diiodo-pyridoxine. All three analogues inhibited the enzyme irreversibly. The kinetic data for the chloro- and bromo-analogues showed that a limiting rate of inhibition is approached as the inhibitor concentration is increased, which indicates that a reversible enzyme: inhibitor affinity complex is formed prior to the irreversible reaction. 4′,5′-Dibromo-pyridoxine exhibited a greater binding affinity (lower Ki) for thymidylate synthase than 4′,5′-dichloro-pyridoxine, and it also reacted faster to irreversibly inhibit the enzyme. The presence of the substrate dUMP (10μM) completely protected thymidylate synthase from inhibition. These data suggest that the halogenated vitamin B6 analogues are active site-directed inhitors of thymidylate synthase, which first bind reversibly to the catalytic site and then react irreversibly with the enzyme. 相似文献
3.
Murli S MacMillan KS Hu Z Ashley GW Dong SD Kealey JT Reeves CD Kennedy J 《Applied and environmental microbiology》2005,71(8):4503-4509
Chemobiosynthesis (J. R. Jacobsen, C. R. Hutchinson, D. E. Cane, and C. Khosla, Science 277:367-369, 1997) is an important route for the production of polyketide analogues and has been used extensively for the production of analogues of 6-deoxyerythronolide B (6-dEB). Here we describe a new route for chemobiosynthesis using a version of 6-deoxyerythronolide B synthase (DEBS) that lacks the loading module. When the engineered DEBS was expressed in both Escherichia coli and Streptomyces coelicolor and fed a variety of acyl-thioesters, several novel 15-R-6-dEB analogues were produced. The simpler "monoketide" acyl-thioester substrates required for this route of 15-R-6-dEB chemobiosynthesis allow greater flexibility and provide a cost-effective alternative to diketide-thioester feeding to DEBS KS1(o) for the production of 15-R-6-dEB analogues. Moreover, the facile synthesis of the monoketide acyl-thioesters allowed investigation of alternative thioester carriers. Several alternatives to N-acetyl cysteamine were found to work efficiently, and one of these, methyl thioglycolate, was verified as a productive thioester carrier for mono- and diketide feeding in both E. coli and S. coelicolor. 相似文献
4.
Process and Metabolic Strategies for Improved Production of Escherichia coli-Derived 6-Deoxyerythronolide B 总被引:2,自引:0,他引:2 下载免费PDF全文
Recently, the feasibility of using Escherichia coli for the heterologous biosynthesis of complex polyketides has been demonstrated. In this report, the development of a robust high-cell-density fed-batch procedure for the efficient production of complex polyketides is described. The effects of various physiological conditions on the productivity and titers of 6-deoxyerythronolide B (6dEB; the macrocyclic core of the antibiotic erythromycin) in recombinant cultures of E. coli were studied in shake flask cultures. The resulting data were used as a foundation to develop a high-cell-density fermentation procedure by building upon procedures reported earlier for recombinant protein production in E. coli. The fermentation strategy employed consistently produced ~100 mg of 6dEB per liter, whereas shake flask conditions generated between 1 and 10 mg per liter. The utility of an accessory thioesterase (TEII from Saccharopolyspora erythraea) for enhancing the productivity of 6dEB in E. coli was also demonstrated (increasing the final titer of 6dEB to 180 mg per liter). In addition to reinforcing the potential for using E. coli as a heterologous host for wild-type- and engineered-polyketide biosynthesis, the procedures described in this study may be useful for the production of secondary metabolites that are difficult to access by other routes. 相似文献
5.
A strongly conserved threonine residue in the I-helix of cytochrome P450 enzymes participates in a proton delivery system for binding and cleavage of dioxygen molecules. 6-Deoxyerythronol ide B hydroxylase (P450eryF) is unusual in that the conserved threonine residue is replaced by alanine in this enzyme. On the basis of crystal structures of substrate-bound P450eryF, it has been proposed that the C-5 hydroxyl group of the substrate and serine-246 of the enzyme form hydrogen bonds with water molecules 519 and 564, respectively. This hydrogen bonding network constitutes the proton delivery system whereby P450eryF maintains its catalytic activity in the absence of a threonine hydroxyl group in the conserved position. To further assess the role in the proton delivery system of hydroxyl groups around the active site, three mutant forms of P450eryF (A245S, S246A, and A245S/S246A) were constructed and characterized. In each case, decreased catalytic activity and increased uncoupling could be correlated with changes in the hydrogen bonding environment. These results suggest that Ser-246 does indeed participate in the proton shuttling pathway, and also support our previous hypothesis that the C-5 hydroxyl group of the substrate participates in the acid-catalyzed dioxygen bond cleavage reaction. Copyright 2000 Academic Press. 相似文献
6.
Engineered Biosynthesis of a Novel Amidated Polyketide, Using the Malonamyl-Specific Initiation Module from the Oxytetracycline Polyketide Synthase 总被引:1,自引:0,他引:1 下载免费PDF全文
Tetracyclines are aromatic polyketides biosynthesized by bacterial type II polyketide synthases (PKSs). Understanding the biochemistry of tetracycline PKSs is an important step toward the rational and combinatorial manipulation of tetracycline biosynthesis. To this end, we have sequenced the gene cluster of oxytetracycline (oxy and otc genes) PKS genes from Streptomyces rimosus. Sequence analysis revealed a total of 21 genes between the otrA and otrB resistance genes. We hypothesized that an amidotransferase, OxyD, synthesizes the malonamate starter unit that is a universal building block for tetracycline compounds. In vivo reconstitution using strain CH999 revealed that the minimal PKS and OxyD are necessary and sufficient for the biosynthesis of amidated polyketides. A novel alkaloid (WJ35, or compound 2) was synthesized as the major product when the oxy-encoded minimal PKS, the C-9 ketoreductase (OxyJ), and OxyD were coexpressed in CH999. WJ35 is an isoquinolone compound derived from an amidated decaketide backbone and cyclized with novel regioselectivity. The expression of OxyD with a heterologous minimal PKS did not afford similarly amidated polyketides, suggesting that the oxy-encoded minimal PKS possesses novel starter unit specificity. 相似文献
7.
Bozenna Golankiewicz Piotr Januszczyk 《Nucleosides, nucleotides & nucleic acids》2013,32(3-5):313-316
Abstract 2-Benzylthiazole-4-carboxamide 4 and 5-(β-D-ribofuranosylamino) thiazole-4-carboxamide 10 were synthesized from phenylacetylamino- and formylamino cyanoacetic acid esters 1a and 1b, respectively. The ribosylation reaction leading to 10 gave rise also to its α anomer as a minor product. 相似文献
8.
Lee-Chung Lin Jen-Hung Hsu Long-Chi Wang 《The Journal of biological chemistry》2010,285(43):33445-33456
Ethylene is a gaseous hormone important for adaptation and survival in plants. To further understand the signaling and regulatory network of ethylene, we used a phenotype-based screening strategy to identify chemical compounds interfering with the ethylene response in Arabidopsis thaliana. By screening a collection of 10,000 structurally diverse small molecules, we identified compounds suppressing the constitutive triple response phenotype in the ethylene overproducer mutant eto1-4. The compounds reduced the expression of a reporter gene responsive to ethylene and the otherwise elevated level of ethylene in eto1-4. Structure and function analysis revealed that the compounds contained a quinazolinone backbone. Further studies with genetic mutants and transgenic plants involved in the ethylene pathway showed that the compounds inhibited ethylene biosynthesis at the step of converting S-adenosylmethionine to 1-aminocyclopropane-1-carboxylic acid (ACC) by ACC synthase. Biochemical studies with in vitro activity assay and enzyme kinetics analysis indicated that a representative compound was an uncompetitive inhibitor of ACC synthase. Finally, global gene expression profiling uncovered a significant number of genes that were co-regulated by the compounds and aminoethoxyvinylglycine, a potent inhibitor of ACC synthase. The use of chemical screening is feasible in identifying small molecules modulating the ethylene response in Arabidopsis seedlings. The discovery of such chemical compounds will be useful in ethylene research and can offer potentially useful agrochemicals for quality improvement in post-harvest agriculture. 相似文献
9.
10.
Hussin A. Rothan Zulqarnain Mohamed Pottayil G. Sasikumar Ketha Amarnadh Reddy Noorsaadah Abd Rahman Rohana Yusof 《International journal of peptide research and therapeutics》2014,20(3):259-267
Even with the great advances in cancer therapies, cancer remains the major cause of death worldwide. The use of high doses of anti-cancer chemotherapeutic drugs eventually causes the inevitable damage in non-neoplastic cells. New, selective, and more effective drugs are therefore urgently required to fight cancer. In this study, the anticancer activity of new peptide analogues (P1 and P2) derived from natural peptide, protegrin-1 (PG-1) were evaluated against human breast carcinoma cell lines (MCF-7) and human non-neoplastic mammary epithelial cell lines (MCF-10A), human hepatocellular carcinoma cells (HepG2) and Vero cells. The CC50 values of cancer cells were significantly lower (P < 0.01) compared to non-neo-plastic cells after treating with P1 and P2 analogues. The analogues of PG-1 showed lower percentage of Lactate Dehydrogenase release (P < 0.001) from non-neoplastic cells compared to cancer cells and low haemolytic potential (P < 0.001) compared to PG-1. The P1 and P2 analogues were shown to be able to induce cancer cell senescence and apoptosis in a p53-dependent pathway which in turn, induced caspase activities and subsequent cell death. Overall, these results suggested that designing shorter peptides, as well as altering the number and position of positive charged residues in P1 and P2 analogues resulted in reduction of their toxicity to non-neoplastic cells and increased selectivity towards cancer cells. Increased selectivity also suggests its potential use to be developed as delivery vectors in the design of chemotherapeutic anticancer drugs. 相似文献
11.
Jacob Gyore Archana R. Parameswar Carleigh F. F. Hebbard Younghoon Oh Erfei Bi Alexei V. Demchenko Neil P. Price Peter Orlean 《The Journal of biological chemistry》2014,289(18):12835-12841
Chitin, a homopolymer of β1,4-linked N-acetylglucosamine (GlcNAc) residues, is a key component of the cell walls of fungi and the exoskeletons of arthropods. Chitin synthases transfer GlcNAc from UDP-GlcNAc to preexisting chitin chains in reactions that are typically stimulated by free GlcNAc. The effect of GlcNAc was probed by using a yeast strain expressing a single chitin synthase, Chs2, by examining formation of chitin oligosaccharides (COs) and insoluble chitin, and by replacing GlcNAc with 2-acylamido analogues of GlcNAc. Synthesis of COs was strongly dependent on inclusion of GlcNAc in chitin synthase incubations, and N,N′-diacetylchitobiose (GlcNAc2) was the major reaction product. Formation of both COs and insoluble chitin was also stimulated by GlcNAc2 and by N-propanoyl-, N-butanoyl-, and N-glycolylglucosamine. MALDI analyses of the COs made in the presence of 2-acylamido analogues of GlcNAc showed they that contained a single GlcNAc analogue and one or more additional GlcNAc residues. These results indicate that Chs2 can use certain 2-acylamido analogues of GlcNAc, and likely free GlcNAc and GlcNAc2 as well, as GlcNAc acceptors in a UDP-GlcNAc-dependent glycosyltransfer reaction. Further, formation of modified disaccharides indicates that CSs can transfer single GlcNAc residues. 相似文献
12.
Gianluca Occhi Daniela Regazzo Giampaolo Trivellin Francesca Boaretto Denis Ciato Sara Bobisse Sergio Ferasin Filomena Cetani Elena Pardi Márta Korbonits Natalia S. Pellegata Viktoryia Sidarovich Alessandro Quattrone Giuseppe Opocher Franco Mantero Carla Scaroni 《PLoS genetics》2013,9(3)
The CDKN1B gene encodes the cyclin-dependent kinase inhibitor p27KIP1, an atypical tumor suppressor playing a key role in cell cycle regulation, cell proliferation, and differentiation. Impaired p27KIP1 expression and/or localization are often observed in tumor cells, further confirming its central role in regulating the cell cycle. Recently, germline mutations in CDKN1B have been associated with the inherited multiple endocrine neoplasia syndrome type 4, an autosomal dominant syndrome characterized by varying combinations of tumors affecting at least two endocrine organs. In this study we identified a 4-bp deletion in a highly conserved regulatory upstream ORF (uORF) in the 5′UTR of the CDKN1B gene in a patient with a pituitary adenoma and a well-differentiated pancreatic neoplasm. This deletion causes the shift of the uORF termination codon with the consequent lengthening of the uORF–encoded peptide and the drastic shortening of the intercistronic space. Our data on the immunohistochemical analysis of the patient''s pancreatic lesion, functional studies based on dual-luciferase assays, site-directed mutagenesis, and on polysome profiling show a negative influence of this deletion on the translation reinitiation at the CDKN1B starting site, with a consequent reduction in p27KIP1 expression. Our findings demonstrate that, in addition to the previously described mechanisms leading to reduced p27KIP1 activity, such as degradation via the ubiquitin/proteasome pathway or non-covalent sequestration, p27KIP1 activity can also be modulated by an uORF and mutations affecting uORF could change p27KIP1 expression. This study adds the CDKN1B gene to the short list of genes for which mutations that either create, delete, or severely modify their regulatory uORFs have been associated with human diseases. 相似文献
13.
Sharon M. Bennett Kelvin K. Ogilvie Jean Paul Roduit 《Nucleosides, nucleotides & nucleic acids》2013,32(1):49-64
Abstract Ethyl dialkylphosphonoacetates were prepared from the corresponding dimethylalkylphosphites via the Arbuzov reaction with ethyl bromoacetate. The phosphonoacetates so produced were converted into enaminoacetates by reaction with DMF dimethylacetal and these were used as bidentate electrophiles for the synthesis of phosphonopyrimidones. Several of these compounds were tested for biological activity but none were found to possess antiviral activity. 相似文献
14.
Darren N. Saunders Elizabeth A. Tindall Robert F. Shearer Jacquelyn Roberson Amy Decker Jean Amos Wilson Vanessa M. Hayes 《PloS one》2012,7(12)
Mutations in the SERPINA1 gene can cause deficiency in the circulating serine protease inhibitor α1-Antitrypsin (α1AT). α1AT deficiency is the major contributor to pulmonary emphysema and liver disease in persons of European ancestry, with a prevalence of 1 in 2500 in the USA. We present the discovery and characterization of a novel SERPINA1 mutant from an asymptomatic Middle Eastern male with circulating α1AT deficiency. This 49 base pair deletion mutation (T379Δ), originally mistyped by IEF, causes a frame-shift replacement of the last sixteen α1AT residues and adds an extra twenty-four residues. Functional analysis showed that the mutant protein is not secreted and prone to intracellular aggregation. 相似文献
15.
我们通过对来自红色亚栖热菌(Meiothermus ruber) CBS-01中的海藻糖合酶(Trehalose synthase)序列比对及三维模型构建, 我们构建了D200G/H165R, R227C, R392A三个定点突变体, 检测其对麦芽糖及海藻糖的转化能力。结果发现: 在50°C时, D200G/H165R、R392A基本失去其原有活性, 而R227C产生海藻糖的能力降低。37°C时, D200G/H165R失去转化能力, 而R392A及R227C保有部分能力。因此我们推测, R392位点可能是维持酶的结构及热稳定性的关键位点, 而D200位点在反应过程中也起重要作用。 相似文献
16.
Rosa Alvarez Ana San-Félix Erik De Clercq Jan Balzarini María José Camarasa 《Nucleosides, nucleotides & nucleic acids》2013,32(1-3):349-359
Abstract Novel TSAO-T analogues, in which the ribofuranosyl moiety has been replaced by an hexofuranosyl sugar moiety, have been prepared and evaluated for their inhibitory effect on HIV-1 replication in cell culture. In contrast to the prototype compound TSAO-T, the hexofuranosyl derivatives proved not active at subtoxic concentrations. 相似文献
17.
Joseph Sabat Tsuyoshi Egawa Changyuan Lu Dennis J. Stuehr Gary J. Gerfen Denis L. Rousseau Syun-Ru Yeh 《The Journal of biological chemistry》2013,288(9):6095-6106
Nitric-oxide synthase (NOS) catalyzes nitric oxide (NO) synthesis via a two-step process:
l-arginine (l-Arg)
→N-hydroxy-l-arginine →citrulline +
NO. In the active site the heme is coordinated by a thiolate ligand, which accepts a
H-bond from a nearby tryptophan residue, Trp-188. Mutation of Trp-188 to histidine in
murine inducible NOS was shown to retard NO synthesis and allow for transient
accumulation of a new intermediate with a Soret maximum at 420 nm during the
l-Arg hydroxylation reaction (Tejero, J., Biswas, A., Wang, Z. Q., Page, R. C.,
Haque, M. M., Hemann, C., Zweier, J. L., Misra, S., and Stuehr, D. J. (2008) J.
Biol. Chem. 283, 33498–33507). However, crystallographic data
showed that the mutation did not perturb the overall structure of the enzyme. To
understand how the proximal mutation affects the oxygen chemistry, we carried out
biophysical studies of the W188H mutant. Our stopped-flow data showed that the 420-nm
intermediate was not only populated during the l-Arg reaction but also during
the N-hydroxy-l-arginine reaction. Spectroscopic data and
structural analysis demonstrated that the 420-nm intermediate is a hydroxide-bound
ferric heme species that is stabilized by an out-of-plane distortion of the heme
macrocycle and a cation radical centered on the tetrahydrobiopterin cofactor. The
current data add important new insights into the previously proposed catalytic mechanism
of NOS (Li, D., Kabir, M., Stuehr, D. J., Rousseau, D. L., and Yeh, S. R. (2007)
J. Am. Chem. Soc. 129, 6943–6951).Nitric-oxide synthase (NOS) is a heme-containing flavoenzyme that synthesizes nitric
oxide (NO) from l-arginine (l-Arg) in a two-step process (Scheme 1). In the first step of
the reaction, one molecule of O2 and two electrons from NADPH are consumed
for the conversion of l-Arg to N-hydroxy-l-arginine
(NOHA).2 In
the second step of the reaction, another molecule of O2 and an additional
electron from NADPH are used to convert NOHA to l-citrulline and NO. Previous
studies suggest that the two steps of the reaction follow distinct mechanisms meditated
by a compound I (Cmpd I) type of ferryl intermediate and a peroxyl intermediate,
respectively (1–7). These mechanisms, however,
remain elusive, as none of the putative intermediates have been experimentally observed
under solution conditions, although (hydro)peroxo intermediates have been identified at
cryogenic temperatures by radiolytic reduction methods (8, 9); in addition, a Cmpd I intermediate has been
observed after peroxyacid treatment (10).Three isoforms of NOS have been identified in mammals: neuronal NOS, endothelial NOS, and
inducible NOS (iNOS). Similar to the P450 class of enzymes, the heme prosthetic group in
all three isoforms of NOS is coordinated by a thiolate sidechain group of an intrinsic
cysteine residue in the proximal heme pocket. In P450s, the thiolate ligand forms a
H-bond with a peptide NH group (11), whereas in NOSs the analogous thiolate ligand accepts a H-bond from the
side chain of a conserved tryptophan residue (Trp-188 in iNOS). It is believed that the
H-bonding interaction with the tryptophan residue reduces the electron donating
capability of the thiolate ligand in NOSs, thereby modulating the oxygen chemistry
occurring in the distal heme pocket of the enzymes (1, 12–15). The mutation of the conserved tryptophan
(Trp-409) in neuronal NOS to Phe or Tyr was shown to increase the rate of NO synthesis
during multiple turnover conditions by decreasing the heme reduction rate and the degree
of NO autoinhibition (15,
16). Comparable mutants of
iNOS, W188F, and W188Y, could not be overexpressed as stable recombinant forms (17); however, the W188H mutant
was successfully expressed, purified, and studied (18).It was shown that the W188H mutation slowed down the l-Arg hydroxylation
reaction by stabilizing a new intermediate with a Soret maximum at 420 nm, which had
never been observed during the wild type reaction, and that the formation of the 420-nm
intermediate coincides with the disappearance of the ternary complex of the enzyme and
the formation of a H4B radical, whereas its decay was concurrent with the
recovery of the resting ferric enzyme. Tejero et al. (18) postulated that the 420-nm
species is a catalytically competent oxygen-containing intermediate, such as a Cmpd I
type of ferryl species. Regardless of the identity of the intermediate, the data
demonstrated that the mutation modulates the structural properties and biochemical
reactivity of the enzyme. However, the crystallographic data of the W188H mutant of the
oxygenase domain of iNOS (iNOSoxy) revealed that its active site structure is
strikingly similar to that of the wild type enzyme (18). In particular, the side chain of His-188,
like that of Trp-188 in the wild type enzyme, formed a H-bond with the thiolate ligand
of the heme.Open in a separate windowTo determine how the W188H mutation modulates the oxygen chemistry of iNOSoxy
without significantly perturbing the active site structure of the enzyme, we carried out
a series of studies of the W188H mutant with optical absorption, resonance Raman, and
EPR spectroscopic methods under steady-state and single turnover conditions. We
discovered that the mutation introduced a unique out-of-plane distortion to the heme
macrocycle that stabilizes the 420-nm intermediate populated during both the
l-Arg and NOHA reactions and at the same time destabilizes the NO bound to the
ferric heme during the NOHA reaction. The results are summarized and discussed in the
context of the previously postulated NOS mechanism (1). 相似文献
18.
W S Powell 《Biochemical and biophysical research communications》1986,136(2):707-712
Polymorphonuclear leukocytes convert arachidonic acid to leukotriene B4 as well as to two 6-trans isomers of this substance. Both leukotriene B4 and 6-trans-leukotriene B4 are metabolized by a hydroxylase in human polymorphonuclear leukocytes to 20-hydroxy metabolites. We have now found a second, previously unknown, metabolic pathway for 6-trans-leukotriene B4 involving reduction of either the 6- or the 10- double bond. One of the two major metabolites of 6-trans-leukotriene B4 in human polymorphonuclear leukocytes is formed by the action of this reductase, followed by hydroxylation by leukotriene B4 20-hydroxylase. On the basis of ultraviolet (maximum absorbance at 232 nm) and mass spectral evidence, this product is either 5,12,20-trihydroxy-6,8,14-eicosatrienoic acid or 5,12,20-trihydroxy-8,10,14-eicosatrienoic acid. 相似文献
19.
J. M. J. Tronchet M. Zsély E. Grand N. Laroze M. Iznaden M. Sollini 《Nucleosides, nucleotides & nucleic acids》2013,32(4-5):649-650
Abstract A variety of modified nucleosides or dinucleosides bearing one of the following functions have been prepared: N-hydroxyureas, N-hydroxyamines, N-hydroxycarbamates, α-(N-hydroxyamino)phosphonates. Upon oxidation, these compounds afford the corresponding aminoxyl free radicals which have been studied by EPR spectroscopy. Some of these compounds exhibited antiviral properties. 相似文献
20.
Latika Nagpal Mohammad M. Haque Amit Saha Nirmalya Mukherjee Arnab Ghosh Brindaban C. Ranu Dennis J. Stuehr Koustubh Panda 《The Journal of biological chemistry》2013,288(27):19685-19697
Overproduction of nitric oxide (NO) by inducible nitric-oxide synthase (iNOS) has been etiologically linked to several inflammatory, immunological, and neurodegenerative diseases. As dimerization of NOS is required for its activity, several dimerization inhibitors, including pyrimidine imidazoles, are being evaluated for therapeutic inhibition of iNOS. However, the precise mechanism of their action is still unclear. Here, we examined the mechanism of iNOS inhibition by a pyrimidine imidazole core compound and its derivative (PID), having low cellular toxicity and high affinity for iNOS, using rapid stopped-flow kinetic, gel filtration, and spectrophotometric analysis. PID bound to iNOS heme to generate an irreversible PID-iNOS monomer complex that could not be converted to active dimers by tetrahydrobiopterin (H4B) and l-arginine (Arg). We utilized the iNOS oxygenase domain (iNOSoxy) and two monomeric mutants whose dimerization could be induced (K82AiNOSoxy) or not induced (D92AiNOSoxy) with H4B to elucidate the kinetics of PID binding to the iNOS monomer and dimer. We observed that the apparent PID affinity for the monomer was 11 times higher than the dimer. PID binding rate was also sensitive to H4B and Arg site occupancy. PID could also interact with nascent iNOS monomers in iNOS-synthesizing RAW cells, to prevent their post-translational dimerization, and it also caused irreversible monomerization of active iNOS dimers thereby accomplishing complete physiological inhibition of iNOS. Thus, our study establishes PID as a versatile iNOS inhibitor and therefore a potential in vivo tool for examining the causal role of iNOS in diseases associated with its overexpression as well as therapeutic control of such diseases. 相似文献