The significance of inter- and intraspecific variation in bacterivorous and herbivorous protists

This paper reviews the emerging evidence on the significance of inter- and intraspecific variation in the feeding behaviour of aquatic protists. Small heterotrophic nanoflagellates (HNF) have been identified as the primary bacterial consumers in most aquatic environments. Recent research using novel techniques such as flow cytometry and high resolution video microscopy revealed that their feeding strategies and grazing rates are diverse. There is an important conceptual difference between uptake rates measured in short-term (min to h) experiments and grazing rates averaged over a longer-term (d). This is because the latter are strongly affected by digestion rates which are species-specific, i.e. the same bacterial prey may be digested differently by various grazers, and the same predator may selectively digest variable prey. Planktonic ciliates are the most important algal consumers in many lakes and marine systems. Large species-specific differences in their feeding behaviour and growth rates have been documented for closely related species. Intraspecific variation, which is, most likely, caused by varying clonal composition may be as important as interspecific variation. Finally, there is some evidence that the individual variability within a given population is generally large, both among bacterivorous HNF and among herbivorous ciliates. The consequences of this diversity becoming apparent at the levels of the species, population, clone and individual need to be considered by aquatic ecologists in their conceptual models. This revised version was published online in August 2006 with corrections to the Cover Date.     

The importance of bacterivorous protists in the decomposition of stream leaf litter

1. Allochthonous organic matter, in the form of senesced leaves, is a major source of carbon supporting detrital food webs. While studies have documented the role of bacteria and fungi in the decomposition of leaf litter, little information is available regarding the role of protists in the decomposition process. 2. We tested the hypothesis that the presence of stream‐dwelling bacterivorous protists leads to an increased rate of leaf decomposition through grazing pressure on bacteria. We isolated live protists from decomposing leaves collected in a stream in Northern Virginia, U.S.A. (Goose Creek) and established laboratory cultures of common bacterivorous protists. 3. Recently senesced leaves from the field were used in laboratory microcosm experiments to determine if the rate of litter decomposition differed between four treatments: bacteria only, bacteria + flagellates, bacteria + flagellates + ciliates, autoclaved stream water (control). We determined the dry weight of leaf remaining, bacterial abundance, flagellate abundance and ciliate abundance for each replicate on days 0, 7, 14, 30, 60 and 120. 4. The rate of leaf decomposition was significantly higher in treatments with protists than without and bacterial abundance declined in protist treatments compared with bacteria only treatment. Weight loss in the presence of flagellates was three to four times higher when protists were present compared with treatments with bacteria alone. These results provide experimental evidence that protists could play a significant role in the detrital processes of streams.     

Prey selectivity of Piona exigua,a planktonic water mite

Summary Females, males and nymphs of Piona exigua were observed during prey capture and ingestion. The encounter radius of the mite was very small, allowing the escape of some crustaceans, such as the calanoid copepod Boeckella. Cladocerans, such as Bosmina or Chydorus, with little or no pre-contact escape response were the most vulnerable to mite predation. Preference values in size-selection experiments varied widely between individual mites. Adult mites presented with two sizes of Daphnia carinata generally preferred the smaller prey. When four sizes were presented simultaneously, however, the preferences of female mites for each size were not significantly different. Patterns of prey selection varied with predator age and sex; for example, female mites preferred Daphnia to Simocephalus, Ceriodaphnia and Chydorus, while nymphs showed a strong preference for Chydorus over Ceriodaphnia. When two prey types were present in equal proportions, differences in total prey density (range 5 or 10/1 – 30 or 50/1) did not alter preferences between the prey species. The preference of female mites for a particular prey type generally increased with increasing relative abundance of the prey type in each of three experiments (Daphnia: Ceriodaphnia, Ceriodaphnia: Chydorus, and Daphnia: Simocephalus). These results imply switching behaviour in these mites. Our results indicate the value of direct observation of predatory behaviour as an adjunct to prey selection experiments. It is also apparent that predatory behaviour in the presence of more than one prey type may not be predictable from that observed in single-prey situations. Predation rates on particular prey species were sometimes reduced in the presence of another species. The relative proportions of prey eaten when two species were present could not be predicted from the number of each species eaten when they were presented separately.     

Acquired type III secretion system determines environmental fitness of epidemic Vibrio parahaemolyticus in the interaction with bacterivorous protists

Genome analyses of marine microbial communities have revealed the widespread occurrence of genomic islands (GIs), many of which encode for protein secretion machineries described in the context of bacteria-eukaryote interactions. Yet experimental support for the specific roles of such GIs in aquatic community interactions remains scarce. Here, we test for the contribution of type III secretion systems (T3SS) to the environmental fitness of epidemic Vibrio parahaemolyticus. Comparisons of V. parahaemolyticus wild types and T3SS-defective mutants demonstrate that the T3SS encoded on genome island VPaI-7 (T3SS-2) promotes survival of V. parahaemolyticus in the interaction with diverse protist taxa. Enhanced persistence was found to be due to T3SS-2 mediated cytotoxicity and facultative parasitism of V. parahaemolyticus on coexisting protists. Growth in the presence of bacterivorous protists and the T3SS-2 genotype showed a strong correlation across environmental and clinical isolates of V. parahaemolyticus. Short-term microcosm experiments provide evidence that protistan hosts facilitate the invasion of T3SS-2 positive V. parahaemolyticus into a coastal plankton community, and that water temperature and productivity further promote enhanced survival of T3SS-2 positive V. parahaemolyticus. This study is the first to describe the fitness advantage of GI-encoded functions in a microbial food web, which may provide a mechanistic explanation for the global spread and the seasonal dynamics of V. parahaemolyticus pathotypes, including the pandemic serotype cluster O3:K6, in aquatic environments.     

The relationship between EUF-K and soil-K fractions of different K selectivity

Summary The fraction of K released during EUF 30-35 min, 80°C, 400 V (EUF₃) and various other soil-K parameters were compared for 24 soils that range widely in clay mineral composition, clay content and percentage K saturation. When EUF₃ was compared with fractions of soil-K containing increasing amounts of non-exchangeable K (=selectively adsorbed K), the R² values decreased with increasing quantities of non-exchangeable K. This indicates that EUF₃ is a function of the exchangeable pool of K, although some initially non-exchangeable K is also involved.     

Relationship between gape size and feeding selectivity of fish larvae from a Neotropical reservoir

Larvae feeding selectivity of Iheringichthys labrosus , Hypophthalmus edentatus and Plagioscion squamosissimus was assessed, examining the role of mouth gape in prey selection. Fish larvae were sampled in the Itaipu Reservoir (Brazil–Paraguay). Iheringichthys labrosus and H. edentatus larvae, with small and similar gape sizes, exhibited slightly different diets; I. labrosus preferred cladocerans ( Bosmina hagmanni , Bosmina huauriensis and Bosminopsis deitersi ) and the rotifer Brachionus calyciflorus . Hypophthalmus edentatus , however, primarily ingested the cladocerans B. hagmanni , Ceriodaphnia cornuta , Daphnia gessneri and Diaphanosoma spinulosum . Plagioscion squamosissimus , with a greater gape size, preferred Calanoida. The mechanistic processes that determine food selectivity of fish larvae in temperate aquatic systems were similar in the Neotropical system. The trophic spectrum of these species is characterized by small- to intermediate-sized prey. Plagioscion squamosissimus larvae, which have larger mouths, exploit primarily larger prey differing from the most abundant species or size classes; consequently, their diet is quite different from I. labrosus larvae and modestly similar to H. edentatus larvae, opportunistic feeders that they eat more abundant prey.     

三峡库区不同植被类型土壤养分特征

通过三峡库区8个植被类型370个样地的群落调查和土壤分析,研究了不同植被类型、土壤类型、海拔对表层土壤有机质及全氮、速效磷、速效钾含量的影响.结果表明:(1)三峡库区不同植被类型土壤有机质、全氮平均含量规律为阔叶林＞竹林＞针叶林＞灌丛＞草丛,森林土壤有机质及全氮平均含量丰富;速效磷平均含量表现为草丛＞落叶阔叶林＞灌丛＞暖性针叶林＞常绿落叶阔叶混交林＞温性针叶林＞竹林＞常绿阔叶林,草丛与其他植被类型差异显著;速效钾平均含量表现为常绿落叶阔叶混交林＞落叶阔叶林＞灌丛＞针叶林＞竹林＞草丛＞常绿阔叶林,竹林、草丛、常绿阔叶林与常绿落叶阔叶混交林、落叶阔叶林、灌丛、针叶林差异显著.(2)不同土壤类型养分含量差异显著,黄棕壤中有机质、全氮含量高,分别为6.83%、0.44%,紫色土中速效磷含量高,达到54.24mg/kg.(3)随海拔升高,有机质、全氮含量呈明显增加趋势,速效磷、速效钾含量变化趋势不明显.     

Effects of body size on selectivity for mating cues in different sensory modalities

We investigated the effects of body mass on the selectivity of female mating preferences in two different sensory channels (acoustic and chemical) using the field cricket, Gryllus integer. We found that body mass affected female selectivity for acoustic cues: larger females were more selective than smaller females for long‐distance calls of males. In contrast, body mass did not affect selectivity for chemical cues of males, which are assessed at close range. Nevertheless, we observed selectivity for these cues. Finally, selectivity for acoustic cues was not correlated with selectivity for chemical cues. These results suggest that energetic concerns may influence mating decisions made at a distance and that the effects of body mass on mating decisions are not necessarily shared across different sensory modalities. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 105 , 160–168.     

施用污泥对油菜根际养分和不同种类重金属的影响

根际是控制植物养分动态的重要因素,养分动态也影响着根际土壤环境。当土壤被污水污泥改良后,根际土壤中的养分和重金属性质也会发生变化。目前很少有人研究施用污泥的土壤中植物根系对根际重金属有效性和分布的影响。采用根垫—冰冻薄层切片法对施用污泥后土壤中油菜根际的养分和重金属分布情况进行研究,以期探明污泥改良土壤中根际重金属的活化特征。当土壤施用污泥后,根际土壤中DTPA提取态Zn,Cd,Ni,Mn,有效磷,有效钾和铵态氮被显著消耗,而根际土壤中DTPA提取态Cu没有明显的消耗或积累。当土壤中施用大量污泥时,根际土壤的pH值随着离根表面距离的增加而增加。无论土壤是否用污泥处理,油菜根际土壤中可交换态Cu都显著减少。当土壤被50%污泥改良时,在距离根表面0—2 mm处的油菜根际土壤中碳酸盐结合态,铁锰氧化物结合态,有机物结合态,残渣态的Cu和Zn都被消耗较多。污泥的施用对油菜的生长有促进作用。随着污泥施用量的增加,油菜地上部分Cu和Zn的含量没有显著变化。施用污泥量小于25%的土壤中,污泥没有增加重金属的可利用性和移动性。除了Cu,油菜根际土壤中DTPA提取态Zn,Cd,Ni的减少表明施用污泥的土壤中重金属的活化是非常有限的。     

Microbial utilization and selectivity of pectin fractions with various structures

To evaluate the fermentation properties of oligosaccharides derived from pectins and their parent polysaccharides, a 5-ml-working-volume, pH- and temperature-controlled fermentor was tested. Six pectic oligosaccharides representing specific substructures found within pectins were prepared. These consisted of oligogalacturonides (average degrees of polymerization [DP] of 5 and 9), methylated oligogalacturonides (average DP of 5), oligorhamnogalacturonides (average DP of 10 as a disaccharide unit of galacturonic acid and rhamnose), oligogalactosides (average DP of 5), and oligoarabinosides (average DP of 6). The influence of these carbohydrates on the human fecal microbiota was evaluated. Use of neutral sugar fractions resulted in an increase in Bifidobacterium populations and gave higher organic acid yields. The Bacteroides-Prevotella group significantly increased on all oligosaccharides except oligogalacturonides with an average DP of 5. The most selective substrates for bifidobacteria were arabinan, galactan, oligoarabinosides, and oligogalactosides.     

Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization

A modified fluorescence in situ hybridization (FISH) method was used to analyze bacterial prey composition in protistan food vacuoles in both laboratory and natural populations. Under laboratory conditions, we exposed two bacterial strains (affiliated with beta- and gamma-Proteobacteria -- Aeromonas hydrophila and Pseudomonas fluorescens, respectively) to grazing by three protists: the flagellates Bodo saltans and Goniomonas sp., and the ciliate Cyclidium glaucoma. Both flagellate species preferably ingested A. hydrophila over P. fluorescens, while C. glaucoma showed no clear preferences. Differences were found in the digestion of bacterial prey with B. saltans digesting significantly faster P. fluorescens compared to two other protists. The field study was conducted in a reservoir as part of a larger experiment. We monitored changes in the bacterial prey composition available compared to the bacteria ingested in flagellate food vacuoles. Bacteria detected by probe HGC69a (Actinobacteria) and R-BT065 were negatively selected by flagellates. Bacteria detected by probe CF319a were initially positively selected but along with a temporal shift in bacterial cell size, this trend changed to negative selection during the experiment. Overall, our analysis of protistan food vacuole content indicated marked effects of flagellate prey selectivity on bacterioplankton community composition.     

Prey size, prey nutrition, and food handling by shrews of different body sizes

We tested some predictions relating metabolic constraints offoraging behavior and prey selection by comparing food handlingand utilization in four sympatric shrew species: Sorex minutus(mean body mass = 3.0 g), S. araneus (8.0 g), Neomys anomalus(10.0 g), and N. fodiens (14.4 g). Live fly larvae, mealwormlarvae, and aquatic arthropods were offered to shrews as smallprey (body mass <0.1 g). Live earthworms, snails, and smallfish were offered as large prey (>0.3 g). The larvae werethe high-nutrition food (>8 kJ/g), and the other prey werethe low-nutrition food (<4 kJ/g). The smallest shrew, S.minutus, utilized (ate + hoarded) <30% of offered food,and the other species utilized >48% of food. The largerthe shrew, the more prey it ate per capita. However, highlyenergetic insect larvae composed 75% of food utilized by S.minutus and only >40% of the food utilized by the other species. Thus, inverse relationships appeared between shrewbody mass and mass-specific food mass utilization and betweenshrew body mass and mass-specific food energy utilization:the largest shrew, N. fodiens, utilized the least food massand the least energy quantity per 1 g of its body mass. Also,the proportion of food hoarded by shrews decreased with increase in size of shrew. With the exception of S. araneus, the sizeof prey hoarded by the shrews was significantly larger thanthe size of prey eaten. Tiny S. minutus hoarded and ate smallerprey items than the other shrews, and large N. fodiens hoardedlarger prey than the other shrews.     

Carbon mineralization and distribution of nutrients within different particle-size fractions of commercially produced olive mill pomace

Composting is a realistic option for disposal of olive mill pomace (OMP) by making it suitable as a soil amendment for organic farming. The chemical and physical characteristics and contribution of particle-size fractions to total nutrients and carbon mineralization of seven commercial composts of OMP (COMP) were investigated. Higher proportions of manure, co-composted with OMP, reduced the organic matter (OM), total carbon and C:N ratio of the product, but increased the content of nutrients and fine particles. The fine particles had higher nutrient contents, but less OM and carbon and, unlike larger particles, did not exhibit any phytotoxicity. Less than 1.5% of added carbon was mineralized in whole compost, but a lower rate was found with larger particles. Separation of COMP by particle size fractionation and application as a soil conditioner is recommended for better optimization of COMP with the <1 mm fraction providing the higher quality compost.     

Prey selectivity and feeding periodicity of logperch larvae in Acton Lake,Ohio

Synopsis The occurence and distribution of milkfish larvae (3–17 mm TL) off western Panay Island, Philippines are reported based on 594 plankton net tows made in April and May 1980. Forty-two tows yielded 44 larvae, together with 1149 milkfish eggs by 98 tows. About 70% of the larvae of all stages came from stations less than 100 m deep and 1–2 km from land. Younger larvae up to 6 mm and about 1 week old occurred at stations of various distances from shore, while older larvae occurred only near shore. About 48% of larvae of all stages were caught by surface tows; younger larvae occurred also in deeper layers (20 and 30 m). Larval abundance increased towards May. Younger larvae tended to occur during the quarter moon periods and older ones during the full and new moon periods.Contribution No. 191 of the SEAFDEC Aquaculture Department.     

不同土壤类型和肥力玉米地土壤养分根际效应研究

采集吉林省玉米植株及土壤样品,研究不同土壤类型和肥力,玉米不同品种和生育时期土壤－植物系统根际养分动态变化及植物吸收的相互关系,结果表明,玉米地土壤ＮＨ＾＋４－Ｎ、ＮＯ＾－３－Ｎ在根际富集,其变化主要与化肥供应有关,高肥力土壤根际有效磷亏缺,种植密度越大,根际亏缺率超大;低肥力土壤则有效磷在根际略高。高肥力土壤有效钾较高,根际有效钾富集也更明显,茎叶、根对养分的吸收量顺序为：Ｎ     

Variation of soil nutrients and particle size under different vegetation types in the Yellow River Delta

The Yellow River Delta wetland, located at the southern coast of Bohai Gulf, provides important ecosystem services such as flood control, water purification, biodiversity conservation, nutrient removal and carbon sequestration, shoreline stabilization, tourism attraction and wetland products maintains in the Yellow River Delta. This study assessed how agricultural activities in a reclamation wetland changed soil pH, soil electric conductivity, soil nutrient and soil particle size as compared to natural vegetation by using a combination of field experiments and lab analysis. The vegetation type included adjacent alfalfa field (Medicago sativa), cotton field (Gossypium spp.), Chinese tamarisk shrub (Tamarix chinensis), and reed marsh (Phragmites sage). The results indicated that the soil pH was higher (pH > 8) in alfalfa field and cotton field, and alfalfa field and reed marsh had significant function in reducing soil salt content, soil electric conductivity of alfalfa field at 0–30 cm were 140.38 ± 14.36, 114.48 ± 14.36, 125.30 ± 11.37 μs/cm. The effect of different vegetation types on soil nutrient was significant (P < 0.05). Soil organic matter at 0–10 cm in Chinese tamarisk shrub and reed marsh was 21.66 ± 3.82 g/kg and 16.51 ± 4.60 g/kg, which was higher than that of alfalfa field (10.47 ± 2.36 g/kg) and cotton field (9.82 ± 1.27 g/kg), but soil total nitrogen content in alfalfa field was the highest, which is significantly higher than that of cotton field, Chinese tamarisk shrub and reed marsh(P < 0.05), the content of soil total nitrogen at 0–10 cm and 10–20 cm was 7.67 ± 0.38 g/kg and 5.97 ± 0.51 g/kg, respectively, while the content of available P and available K was reversed. The difference of soil particle size between layers was not significant (P > 0.05), the sand content of Chinese tamarisk shrub soils in 0–10 cm was the highest, the next was alfalfa field and cotton field, and the content of silt and clay in reed marsh was higher than the others. The correlation and significant degree between soil particle size and soil nutrient was related with vegetation types, and soil organic matter was significantly positively correlated with soil silt and clay content on the alfalfa field. The results demonstrated that wetland cultivation was one of the most important factors influencing on the nutrient fate and reserves in soil, which could lead to rapid nutrient release and slow restoration through abandon cultivation. Consequently, compared with cotton field, alfalfa field is more favorable to sustainable management of wetland cultivation in the Yellow River Delta. It should be considered in wetland restoration projects planning.     

Changes in microbial biomass and P fractions in biogenic household waste compost amended with inorganic P fertilizers

The present study was conducted to evaluate the changes in microbial biomass indices (C, N, and especially P) and in P fractions in compost amended with inorganic P fertilizers. In the non-amended control, the average contents of microbial biomass C, N, and P were 1744, 193, and 63 microg g(-1) compost, respectively. On average, 1.3% of total P was stored as microbial biomass P. The addition of KH(2)PO(4) and TSP (triple super phosphate) led to immediate significant increases in microbial biomass C, N, and P. Approximately, 4.6% of the added TSP and 5.8% of the added KH(2)PO(4) were incorporated on average into the microbial biomass throughout the incubation. Approximately, 4.7% of the 1mg and 5.8% of the 2mg addition rate were incorporated on average into the microbial biomass. In the amendment treatments, the average contents of microbial biomass C, N, and P declined by 44%, 64%, and 49%, respectively. Initially, the average size of the P fractions in the non-amended compost increased in the order (% of total P in brackets) resin P (0.7%)相似文献   

Assimilation and turnover time of phosphorus by size fractions of microplankton in lakes of different types

In a direction from oligotrophic lakes to more productive ones concentration of biologically available phosphorus (BAP) increased from 1 up to 35 ??g/L, turnover time of BAP ?? from 19 up to 1300 min. Relative participation of phytoplankton and bacterioplankton fractions of microplankton in phosphorus assimilation depend on productivity of lakes. In oligotrophic lakes the phosphorus assimilation by bacteria reached 80?C90% of total assimilation. As the trophic status of lakes increased the participation of bacteria in phosphorus assimilation decreased to 10?C20%, accordingly assimilation activity of phytoplankton increased. It testifies to domination of phosphorus flow through microbial organisms (0.23?C1.5 ??m) in oligotrophic lakes.     

荒漠草原不同植被微斑块土壤粒径分布分形特征与养分的关系

采集宁夏中部干旱带荒漠草原4种植被(猪毛蒿、甘草、苦豆子、草木樨状黄芪)微斑块土壤剖面3个层次土壤,测定了各微斑块土壤颗粒粒级分布、有机质、pH值、土壤电导率(EC)、全氮、全磷和全钾等理化性质,探讨了不同植被微斑块土壤粒径分布的分形维数(D)特征及其与土壤理化性质的关系.结果表明:斑块化植被分布可影响土壤粒径分布,其影响作用以草木樨状黄芪微斑块最大(D=2.51),甘草微斑块最低(D=2.46);分形维数与黏粒、粉粒含量呈显著正相关,而与砂粒含量呈显著负相关;土壤粒径分布分形维数与pH和EC呈显著正相关,与有机质和全氮含量呈显著负相关,与全磷和全钾含量无显著相关关系.斑块化植被分布有潜在土地盐碱化和土地退化的趋势.     

Prey capture of pike Esox lucius larvae in turbid water

Pike Esox lucius larvae captured fewer calanoid and cyclopoid copepods in turbid than in clear water, whereas no differences were detected in feeding rates on Daphnia longispina. Decreased capture of copepods may lead to lower growth and survival of E. lucius larvae in turbid areas, in particular, if cladocerans are scarce.