The analysis of aquatic vegetation on the Atherton Tableland,north-east Queensland,Australia

The aquatic vegetation of three sites on the Atherton Tableland is described and analysed with the aid of numerical classifications. Despite major physiognomic differences in the vegetation between sites, four floristic groups are recognized which can be related to major habitat types. Water depth and seasonal fluctuations in water level are suggested as the main factors controlling vegetation distributions in the absence of disturbance by biotic agencies. Species characteristic of particular aquatic communities are identified and these could prove useful in the recognition of hydroseral stages in pollen diagrams constructed from these sites and in the determination of past lake levels.     

Aquatic vegetation of the Orinoco River Delta (Venezuela). An overview

The Orinoco River Delta is a complex of relatively unknown ecosystems made up of aquatic and semiaquatic habitats. The region includes a Mariusa National Park and the Orinoco Delta River Biosphere Reserve. The 23 sites studied included lentic habitats (lagoons and creeks) and lotic habitats (streams of variable breadth and current) which varied range from black to white waters. A collection of aquatic vascular plants was made and the physical and chemical variables were measured. A total of 100 species were identified, 48% of which are new records for the Delta territory. A Canonical Correspondence Analysis divided the species and communities into two groups: The lentic habitats of lakes and lagoons, which show a greater species richness and the lotic habitats of the main river courses. This study forms part of an ongoing research project on the floristic and abiotic characteristics of the aquatic communities in the Orinoco River Delta.     

A palynological reconstruction of pre-European riparian vegetation at Wollombi, New South Wales and its application to stream bank management and revegetation

Summary A palynological investigation was conducted on sediments from three small floodplain swamps on upper Wollombi Brook in the Hunter Valley NSW in order to reconstruct pre-European riparian vegetation composition and community structure. Pre-European riparian plant communities on upper Wollombi Brook were characterized by wet sclerophyll forest associations with rainforest elements (most likely close to the channel). Major changes in both the nature and extent of riparian vegetation have been associated with European settlement. The pre-European pollen spectra assists the identification of a suite of native taxa potentially suitable for use in riparian revegetation operations, particularly in highly cleared streambank sites where protection of water quality and aquatic habitat is an important goal but where insufficient local remnants are available to indicate pre-existing plant species. The research emphasizes the use of palaeoenvironmental evidence as a tool for contemporary environmental management.     

Bacterial communities in water and sediment shaped by paper mill pollution and indicated bacterial taxa in sediment in Daling River

Effluents from paper mills are highly toxic and are a major source of aquatic pollution. In this study, we collected water and sediment samples to examine the microbial communities using denaturing gradient gel electrophoresis and identified bacterial taxa greatly affected by paper mill pollution using next-generation sequencing data. Our results indicated that bacterial communities in downstream sediments were similar to those in paper mill discharge sites, indicating obvious effects of pollution, while bacterial communities in downstream water samples showed similar profiles to those in upstream sites, both being quite different from the bacterial communities in paper mill discharge sites. This was possibly because of the short contact period. In addition, bacterial communities in the estuary were quite different from those in other water and sediment samples, which was owing to the special habitat type. Considering the storage of paper mill pollutants in sediment and the significant effect on shifts in bacterial communities, we selected Clostridia and Epsilonproteobacteria at the class level and Fusibacter and Desulfobulbus at the genus level as bacterial indicators of paper mill pollution. To monitor the remediation of polluted aquatic environments, we propose Sphingobacteria, Alphaproteobacteria, Actinobacteria, Subdivision3, Planctomycetacia and Verrucomicrobiae at the class level and Bacillus, Steroidobacter, Nocardioides, Terrimonas, Pirellula and Methylibium at the genus level.     

Importance of Saprotrophic Freshwater Fungi for Pollen Degradation

Fungi and bacteria are the major organic matter (OM) decomposers in aquatic ecosystems. While bacteria are regarded as primary mineralizers in the pelagic zone of lakes and oceans, fungi dominate OM decomposition in streams and wetlands. Recent findings indicate that fungal communities are also active in lakes, but little is known about their diversity and interactions with bacteria. Therefore, the decomposer niche overlap of saprotrophic fungi and bacteria was studied on pollen (as a seasonally recurring source of fine particulate OM) by performing microcosm experiments with three different lake types. Special emphasis was placed on analysis of fungal community composition and diversity. We hypothesized that (I) pollen select for small saprotrophic fungi and at the same time for typical particle-associated bacteria; (II) fungal communities form specific free-living and attached sub-communities in each lake type; (III) the ratio between fungi or bacteria on pollen is controlled by the lake''s chemistry. Bacteria-to-fungi ratios were determined by quantitative PCR (qPCR), and bacterial and fungal diversity were studied by clone libraries and denaturing gradient gel electrophoresis (DGGE) fingerprints. A protease assay was used to identify functional differences between treatments. For generalization, systematic differences in bacteria-to-fungi ratios were analyzed with a dataset from the nearby Baltic Sea rivers. High abundances of Chytridiomycota as well as occurrences of Cryptomycota and yeast-like fungi confirm the decomposer niche overlap of saprotrophic fungi and bacteria on pollen. As hypothesized, microbial communities consistently differed between the lake types and exhibited functional differences. Bacteria-to-fungi ratios correlated well with parameters such as organic carbon and pH. The importance of dissolved organic carbon and nitrogen for bacteria-to-fungi ratios was supported by the Baltic Sea river dataset. Our findings highlight the fact that carbon-to-nitrogen ratios may also control fungal contributions to OM decomposition in aquatic ecosystems.     

Topographical Mapping of the Rainbow Trout (Oncorhynchus mykiss) Microbiome Reveals a Diverse Bacterial Community with Antifungal Properties in the Skin

The mucosal surfaces of wild and farmed aquatic vertebrates face the threat of many aquatic pathogens, including fungi. These surfaces are colonized by diverse symbiotic bacterial communities that may contribute to fight infection. Whereas the gut microbiome of teleosts has been extensively studied using pyrosequencing, this tool has rarely been employed to study the compositions of the bacterial communities present on other teleost mucosal surfaces. Here we provide a topographical map of the mucosal microbiome of an aquatic vertebrate, the rainbow trout (Oncorhynchus mykiss). Using 16S rRNA pyrosequencing, we revealed novel bacterial diversity at each of the five body sites sampled and showed that body site is a strong predictor of community composition. The skin exhibited the highest diversity, followed by the olfactory organ, gills, and gut. Flectobacillus was highly represented within skin and gill communities. Principal coordinate analysis and plots revealed clustering of external sites apart from internal sites. A highly diverse community was present within the epithelium, as demonstrated by confocal microscopy and pyrosequencing. Using in vitro assays, we demonstrated that two Arthrobacter sp. skin isolates, a Psychrobacter sp. strain, and a combined skin aerobic bacterial sample inhibit the growth of Saprolegnia australis and Mucor hiemalis, two important aquatic fungal pathogens. These results underscore the importance of symbiotic bacterial communities of fish and their potential role for the control of aquatic fungal diseases.     

Centennial‐scale changes to the aquatic vegetation structure of a shallow eutrophic lake and implications for restoration

1. We investigate long‐term (>200 years) changes to the composition and spatial structure of macrophyte communities in a shallow, eutrophic lake (Barton Broad, eastern England) and consider the implications for lake restoration. 2. Historical macrophyte data were assembled from a variety of sources: existing plant databases, museum herbaria, journal articles, old photographs and eyewitness accounts. Additionally, two types of sediment core sample were analysed for plant macro‐remains and pollen; bulk basal samples from multiple core sites analysed to provide information on ‘pre‐disturbance’ macrophyte communities and two whole cores analysed to determine historical change. 3. Prior to the late 1800s, macrophyte communities were diverse and included a multilayered mosaic of short‐stature submerged taxa and taller submerged and floating‐leaved species. With the progression of eutrophication after around 1900, the former community was displaced by the latter. Diversity was maintained, however, since an encroaching Schoenoplectus–nymphaeid swamp generated extensive patches of low‐energy habitat affording refugia for several macrophytes otherwise unable to withstand the hydraulic forces associated with open water conditions. When this swamp vegetation disappeared in the 1950s, many of the ‘dependent’ aquatic macrophytes also declined leaving behind a sparse, species‐poor community (as today) resilient to both eutrophication and turbulent open waters. 4. The combination of historical and palaeolimnological data sources offers considerable benefits for reconstructing past changes to the aquatic vegetation of lakes and for setting restoration goals. In this respect, our study suggests that successful restoration might often be better judged by reinstatement of the characteristic structure of plant communities than the fine detail of species lists; when nutrients are low and the structure is right, the right species will follow.     

Alteration of macroinvertebrate community in tropical lentic systems in context of Sediment redox potential and organic pollution

Limnological studies in two tropical Indian aquatic habitats showed that macroinvertebrate communities have greater diversity than other biotic communities present there. Sediment redox potential is found to be an important factor for alteration of macroinvertebrate communities in aquatic bodies. Anthropogenic activities have influenced the changing of sediment redox potential values of the studied sites and thereby affected the macroinvertebrate communities. A positive correlation has been established between rH and Margelef index in our study.     

Modern pollen–vegetation relationships along transects on the Whangapoua Estuary, Great Barrier Island, northern New Zealand

Aims To quantify pollen–vegetation relationships from saline to freshwater in an estuarine gradient from surface samples of the modern pollen rain, to allow more accurate interpretations of the stratigraphic palynological record. Location Whangapoua Estuary, Great Barrier Island, northern New Zealand. Methods Six transects were laid out along a vegetation sequence running from estuarine mud to freshwater swamp. Along these transect lines, 108 plots were sampled for vegetation and surface sediments from wet sand, mud, plant litter or moss (sand and mud sites are inundated by most tides, other sites less frequently). All sediment samples were analysed for pollen. The relationships between plant species frequency and pollen representation were examined at a community scale using twinspan and ordination analyses, and for individual species using fidelity and dispersibility indices, regression and box‐plot analyses. Results The quantitative relationships between source taxon vegetation frequency and its pollen representation varied between species due to differential pollen production and dispersal. twinspan of the surface pollen samples suggests five vegetation types: (A) mangrove (Avicennia marina); (C) Leptocarpus similis salt meadow; (D) Baumea sedges; (E) Leptospermum shrubland; and (F) Typha/Cordyline swamp forest. The (B) Juncus kraussii community is not represented palynologically owing to the destruction of its delicate pollen grains during acetolysis of samples. Detrended correspondence analysis places these communities on an estuarine‐to‐freshwater gradient. However, pollen assemblages at the seaward end of the salinity gradient are less clearly representative of the associated vegetation than those at the landward end, probably because the open vegetation at the former allows the influx of wind‐ and water‐dispersed pollen from surrounding vegetation. Main conclusions The vegetation pattern (zonation) at Whangapoua is reflected in the pollen rain. When the long‐distance and over‐represented pollen types are excluded, five out of six of the broad vegetation communities can be identified by their pollen spectra. Species with high fidelity and low‐to‐moderate dispersibility indices can be used to identify the vegetation types in the sedimentary sequences. The more open vegetation types at the ‘marine end’ of the sequence tend to be ‘overwhelmed’ by regional pollen, but the nature of the sediments and the presence of discriminatory species (e.g. A. marina, Plagianthus divaricatus, Cordyline australis), even in small amounts, will allow correct identification of the local vegetation represented in sedimentary palynological sequences. A box‐plot analysis indicates that the pollen and spore types A. marina (mangroves), Sarcocornia quinqueflora (salt meadow), P. divaricatus (sedges), Gleichenia (shrubland) and C. australis (swamp forest) are highly discriminatory in relation to vegetation type. These discriminatory palynomorphs help with the interpretation of stratigraphic pollen studies. However, salt marsh vegetation communities in the sediments must be interpreted with caution as the marine sediments are easily affected by erosion, bioturbation and tidal inundation effects.     

Facilitating the restoration of aquatic plant communities in a Ramsar wetland

Human activities such as land clearing and intensive land use around water bodies, particularly wetlands, have a detrimental impact on water quality and quantity, aquatic plant communities, and associated wetland fauna. Lake Alexandrina and Lake Albert are internationally significant Ramsar wetlands located at the terminus of the Murray River, Australia's longest river system. Agriculture, water regulation, and extraction and droughts have had a detrimental impact on native plant communities in the lakes. We studied the influence of young (<1–3 years) and old (8–11 years) plantings of a native sedge (bulrush), Schoenoplectus tabernaemontani, to facilitate the establishment of aquatic plant communities in comparison with remnant and control sites. We also measured how planting structure (height, stand width, and stem density) changed with age in comparison with remnant sites. Results suggest that as plantings age they get substantially wider and have a greater maximum height, although do not reach similar stand widths by 11 years when compared to remnant areas. However, old plantings do not differ from remnant habitats in relation to aquatic plant species richness, counts of aquatic plants, and community composition. Young plantings have substantially less abundant and diverse plant communities, but are developing on a similar trajectory to old plantings. It is likely that planting sedges along lake shorelines causes a breakwater effect that facilitates the recolonization of wetland plants between the planted area and the water's edge. Management agencies should consider restoring native sedges to increase aquatic biodiversity, and potentially reduce erosion.     

Attached bacterial populations shared by four species of aquatic angiosperms

Symbiotic relationships between microbes and plants are common and well studied in terrestrial ecosystems, but little is known about such relationships in aquatic environments. We compared the phylogenetic diversities of leaf- and root-attached bacteria from four species of aquatic angiosperms using denaturing gradient gel electrophoresis (DGGE) and DNA sequencing of PCR-amplified 16S rRNA genes. Plants were collected from three beds in Chesapeake Bay at sites characterized as freshwater (Vallisneria americana), brackish (Potomogeton perfoliatus and Stuckenia pectinata), and marine (Zostera marina). DGGE analyses showed that bacterial communities were very similar for replicate samples of leaves from canopy-forming plants S. pectinata and P. perfoliatus and less similar for replicate samples of leaves from meadow-forming plants Z. marina and V. americana and of roots of all species. In contrast, bacterial communities differed greatly among plant species and between leaves and roots. DNA sequencing identified 154 bacterial phylotypes, most of which were restricted to single plant species. However, 12 phylotypes were found on more than one plant species, and several of these phylotypes were abundant in clone libraries and represented the darkest bands in DGGE banding patterns. Root-attached phylotypes included relatives of sulfur-oxidizing Gammaproteobacteria and sulfate-reducing Deltaproteobacteria. Leaf-attached phylotypes included relatives of polymer-degrading Bacteroidetes and phototrophic Alphaproteobacteria. Also, leaves and roots of three plant species hosted relatives of methylotrophic Betaproteobacteria belonging to the family Methylophilaceae. These results suggest that aquatic angiosperms host specialized communities of bacteria on their surfaces, including several broadly distributed and potentially mutualistic bacterial populations.     

Climate extremes are associated with invertebrate taxonomic and functional composition in mountain lakes

Climate change is expected to increase climate variability and the occurrence of extreme climatic events, with potentially devastating effects on aquatic ecosystems. However, little is known about the role of climate extremes in structuring aquatic communities or the interplay between climate and local abiotic and biotic factors. Here, we examine the relative influence of climate and local abiotic and biotic conditions on biodiversity and community structure in lake invertebrates. We sampled aquatic invertebrates and measured environmental variables in 19 lakes throughout California, USA, to test hypotheses of the relationship between climate, local biotic and environmental conditions, and the taxonomic and functional structure of aquatic invertebrate communities. We found that, while local biotic and abiotic factors such as habitat availability and conductivity were the most consistent predictors of alpha diversity, extreme climate conditions such as maximum summer temperature and dry‐season precipitation were most often associated with multivariate taxonomic and functional composition. Specifically, sites with high maximum temperatures and low dry‐season precipitation housed communities containing high abundances of large predatory taxa. Furthermore, both climate dissimilarity and abiotic dissimilarity determined taxonomic turnover among sites (beta diversity). These findings suggest that while local‐scale environmental variables may predict alpha diversity, climatic variability is important to consider when projecting broad‐scale aquatic community responses to the extreme temperature and precipitation events that are expected for much of the world during the next century.     

太白山表土花粉和气孔器与植物类型的关系研究

通过陕西太白山13个样点表土花粉组合特征和气孔器及其与植物类型之间关系的分析,结果发现:针阔混交林花粉组合能很好地反映植物类型特征,落叶阔叶林和针叶林花粉组合能较好地与植物类型相对应,高山灌丛草甸花粉组合未能反映植物类型数量特征;主要花粉类型松属、铁杉属和桦属花粉具超代表性,胡桃属和榆属花粉具适宜代表性,落叶松属、冷杉属、杜鹃花科和槭属花粉具低代表性;DCA(Detrended Correspondence Analysis)分析表明,通过花粉数据能够较好区分不同植被类型,结合气孔器特征能够准确反映植被特征。     

Modern pollen rain in savanna and forest ecosystems of Gabon and Cameroon,Central Atlantic Africa

Eighty modern soil surface and litter samples from southern Cameroon and Gabon, Central Atlantic Africa (5°N–4°S, 10°–15°W), were analysed for pollen content. The samples are distributed among two main vegetation types: savanna (8 samples) and forest (71 samples). The aim of this study is to provide new data on the modern pollen rain in the Guineo-Congolian phytogeographical region, mainly in forest communities (secondary and mature forests on well drained soils, and hygrophilous forests) and to interpret these data using diagrams of pollen percentages and numerical analyses. The savannas are well identified by high frequencies of non-arboreal pollen with as pollen marker the Poaceae, and the forests by high frequencies of arboreal pollen with as important families the Burseraceae, Caesalpiniaceae, Mimosaceae, Euphorbiaceae and Sapindaceae. Within the forest ecosystem, secondary and mature forests on well drained soils can be differentiated on the basis of distinct assemblages of tree pollen taxa such as Zanthoxylum, Phyllanthus, Tetrorchidium, Margaritaria discoidea in secondary forest spectra and abundance of Burseraceae, Caesalpiniaceae, Sapindaceae in mature forest ones. In addition, hygrophilous forests are well identified by the presence of high pollen contributors such as Uapaca, Nauclea, Macaranga and Raphia. This work shows that the major vegetation communities occurring today in Cameroon and Gabon can be well differentiated by their pollen assemblages.     

Disturbance Frequency and Community Stability in Native Tallgrass Prairie

Ecological communities are spatially and temporally variable in response to a variety of biotic and abiotic forces. It is not always clear, however, if spatial and temporal variability leads to instability in communities. Instability may result from strong biotic interactions or from stochastic processes acting on small populations. I used 10-15 yr of annual data from the Konza Prairie Long-Term Ecological Research site to examine whether plant, breeding bird, grasshopper, and small mammal communities in tallgrass prairie exhibit stability or directional change in response to different experimentally induced fire frequencies. Based on ordination and ANOVA, plant and grasshopper communities on annually burned sites differed significantly from plant and grasshopper communities on less frequently burned sites. Breeding birds and small mammals differed among sites as well, but these differences were not clearly related to disturbance frequency. A modified time series analysis indicated that plant communities were undergoing directional change (unstable) on all watersheds, regardless of fire frequency. Contrary to expectations, directional change was greatest on the annually burned sites and lowest on the infrequently burned sites. Unlike the plant communities, breeding bird, grasshopper, and small mammal communities were temporally stable, despite high-compositional variability from 1 yr to the next. Stability among the consumer communities within these dynamic plant communities occurs because three-dimensional vegetation structure does not change over time, despite changes in plant species composition. Evidence suggests that instability in the plant community results from strong biotic interactions among temporally persistent core species and stochastic dynamics among infrequent satellite species. Overall, community stability cannot be assessed if the pattern of temporal dynamics is unknown. Long-term empirical studies of different taxa under different disturbance regimes are needed to determine over what time frames and spatial scales communities may be stable. Such studies are essential for the development of generalities regarding the relationship between disturbance frequency and community stability in terrestrial and aquatic systems.     

Human impact on an island ecosystem: pollen data from Sandoy, Faroe Islands

Aim To investigate the form and dynamics of ecosystems on an isolated island in the North Atlantic before human settlement in the first millennium ad , and the effects of human activities thereafter. Location The island of Sandoy, Faroes (61°50′ N, 6°45′ W). Methods Two sequences of lake sediments and one of peat were studied using pollen analysis and sedimentological techniques. Age models were constructed on the basis of radiocarbon dating and, in one case, tephrochronology. The data were analysed statistically and compared with existing data from the region. Results The pollen data indicate that early Holocene vegetation consisted of fell‐field communities probably growing on raw, skeletal soils. These communities gave way to grass‐ and sedge‐dominated communities, which in turn were largely replaced by dwarf shrub‐dominated blanket mire communities well before the first arrival of humans. There is evidence for episodic soil erosion, particularly in the uplands. Changes in the records attributable to human impact are minor in comparison with many other situations in the North Atlantic margins, and with certain published sequences from elsewhere in the Faroes. They include: (1) the appearance of cereal pollen and charcoal, (2) an expansion of ruderal taxa, (3) a decline in certain taxa, notably Juniperus communis and Filipendula ulmaria, and (4) a renewed increase in rates of upland soil erosion. The reliability of palaeoecological inferences drawn from these sites, and more generally from sites in similar unforested situations, is discussed. Main conclusions The subdued amplitude of palynological and sedimentological responses to settlement at these sites can be explained partly in terms of their location and partly in terms of the sensitivity of different parts of the ecosystem to human activities. This study is important in establishing that the imposition of people on the pristine environment of Sandoy, while far from negligible, especially in the immediate vicinity of early farms and at high altitudes, had relatively little ecological impact in many parts of the landscape.